Bio-Economic Outcomes Under Alternative Management Strategies With Human Choice And Behavior: Modeling Tautog And Anglers' Preferences, Eric T. Schultz, Zhenshan Chen, Pengfei Liu, Stephen Swallow, Jacob M. Kasper

EEB Articles

Key findings

• There was relatively strong support for slot limits, and roughly comparable support for status quo management, among anglers fishing for Tautog in Long Island Sound.
• Respondents were not in favor of a total moratorium on fishing for Tautog.
• Providing survey respondents information on how different management scenarios will affect fishing in the future had little detectable impact on fishing preferences.
• Respondents expected to fish less in the future if a wide slot limit is imposed or if status quo management is maintained, but expected no change in effort if a narrow slot limit is imposed.
• Changes in regulations …

Using Northern Pike And Yellow Perch To Attempt A Trophic Cascade, Bryan Sea

Journal of Earth and Life Science

In the midwestern USA, water clarity has decreased in shallow lakes as a result of large populations of Fathead Minnow Pimephales promelas and agriculture that impact the life that depend on shallow habitats, such as waterfowl, fish, and aquatic plants. Northern Pike Esox lucius and Yellow Perch Perca flavescens were stocked in a few lakes in attempt to create a tropic cascade and reduce populations of nuisance Fathead Minnows. Northern Pike were stocked as fry and Yellow Perch were stocked as adults either pre-spawn or post-spawn. Lake managers hypothesized adult Yellow Perch would spawn and the age-0 Perch would feed …

Spring Field Report, March-May 2020, W. Ross Silcock

Nebraska Bird Review

Although there were numerous early arrival dates, most were in the range of historically earliest expected dates; notable, however, was a lone record-early Whiterumped Sandpiper, nicely photographed. Record late by a month was a juvenile Redtailed (Harlan’s) Hawk, also confirmed by photo. Perhaps most prominent this spring were the large numbers of several species. Most eye-popping were record spring totals of 22 Glossy Ibises, 11 Yellow-bellied Flycatchers, 14 Veeries, including five in the Panhandle, 48 Gray-cheeked Thrushes, 20 Bay-breasted Warblers, not long ago a rare bird in spring, 45 Golden-winged Warblers and 27 Canada Warblers, both of which were about …

The Nebraska Bird Review, Volume 88 March 2020 Number 1

Nebraska Bird Review

Winter Field Report, Dec. 2019 - Feb. 2020, by W. Ross Silcock …2

2019-2020 Christmas Bird Counts …18, 27-41

Annual Color Photo Section …19-26

Annual Treasurer's Report for 2019, by Jan Johnson …42

Subscription and Organization Information …43

Table Of Contents

Human–Wildlife Interactions

This is the table of contents.

Distribution And Reproduction By The Purple Gallinule (Porphyrio Martinica) In Arkansas, C. Renn Tumlison, Terry L. Tumlison, Tamzen T. Bryant

Journal of the Arkansas Academy of Science

The Purple Gallinule (Porphyrio martinica) is a rare bird in Arkansas, and its populations likely have declined due to loss of marshy areas with emergent vegetation. By use of online sources for citizen science combined with a field study, we elucidate the current distribution of this bird in Arkansas, and document characteristics of reproduction and development. Purple Gallinules arrive in Arkansas as early as April and remain to late October. Nesting occurs from early May into July, and nests may represent second broods. Ontogenetic changes in hatchlings are described.

Finding Fishers: Determining The Distribution Of A Rare Forest Mesocarnivore In The Northern Rocky Mountains, Jessica M. Krohner

Graduate Student Theses, Dissertations, & Professional Papers

The Northern Rocky Mountain fisher population (Pekania pennanti), is classified as a Species of Greatest Conservation Need and is of special concern to state, federal, and tribal entities. In this thesis, we present methods to effectively survey fishers across the northern Rockies of Idaho and Montana, and provide estimates of fisher distribution at a population range-wide scale through occupancy analyses. We also assess factors that influence fisher occurrence through covariate analyses and identify core fisher habitat in the northern Rockies through spatial occupancy modeling. By sampling broadly across the landscape, we provide baseline distributional data for comparison against …

Phylogenetic And Population Genetic Analysis Of The Humboldt's Flying Squirrel Using High-Throughput Sequencing Data, Stella Chi Yuan

Cal Poly Humboldt theses and projects

The intraspecific genetic variation and diversity within the Humboldt’s flying squirrel (Glaucomys oregonensis) has not yet been characterized despite its elevation to full species in 2017. The San Bernardino flying squirrel (G. o. californicus) is thought to be the southernmost population of G. oregonensis and is restricted to the San Bernardino and San Jacinto Mountains in California, but recent surveys indicate they have been extirpated from the latter locality. In order to provide baseline genetic data across the geographic range of G. oregonensis, I had the following objectives: 1) investigate the intraspecific molecular variation in …

Is Context Dependency Imperative To Understanding The Impacts Of Invasive Plants?, Brendan B. Haile

Masters Theses

Introduced exotic species have a tendency to become invasive and impact local biological communities. Invasions often impact community attributes such as cover and species richness, but these factors may also regulate patterns of invasion. In such cases, impacts may be dependent on the invasion context. We used data from the Buell-Small Succession Study, a long-term permanent plot study in the piedmont region of New Jersey, to document context dependency in invasion. To do this, we analyzed the factors that affected the colonization and growth of four invasive species, Alliaria petiolata, Lonicera japonica, Microstegium vimineum and Rosa multiflora, as well …

Intraspecific Aggression Towards Common Bottlenose Dolphin Calves, Northern Gulf Of Mexico, Errol Ronje, Sarah Piwetz, Heidi Whitehead, Keith D. Mullin

Gulf and Caribbean Research

Infanticide has been widely documented throughout the animal kingdom, and has generally been viewed as an evolved, or adaptive behavior for the perpetrators. Infanticide motivated by increased sexual access to females with calves, or the elimination of potential genetic competition in the form of calf-directed aggression or infanticide, has been proposed for delphinids including killer whales, Indo-Pacific humpback dolphins, Guiana dolphins, and bottlenose dolphins. However, reports of intraspecific aggression towards bottlenose dolphin calves are relatively infrequent, and accounts of confirmed infanticide are rarer still. Reporting instances of intraspecific calf-directed aggression aids researchers to better understand the socio-behavioral context of these …

Landscape Ecology And Population Genomics Of Two Sympatric Pitviper Species Across A Fragmented Appalachian Landscape, Thomas Maigret

Theses and Dissertations--Biology

Understanding the link between landscape patterns and ecological and evolutionary processes is an important prerequisite for informed wildlife conservation and management, especially in rapidly changing landscapes. Until recently, the inaccessibility of spatial and genomic data sets of sufficient resolution limited our ability to incorporate the impacts of landscape patterns into predictions of ecological and environmental outcomes. In this dissertation, I utilized several high-resolution spatial and genomic data sets to address ecological questions in a rapidly fragmenting landscape in southeastern Kentucky. Overall, my results indicate that large-scale surface coal mining is causing widespread homogenization of landforms, resulting in a uniquely permanent …

Current Dog Breeding Practices Impacts On Health And Preservation Of Purebred Dogs, Bridget E. Baker

Honors Theses and Capstones

No abstract provided.

Black Bear, Jimmy D. Taylor, James P. Phillips

Wildlife Damage Management Technical Series

The American black bear (Ursus americanus, Figure 1) is a challenging species for wildlife agencies to manage due to its size, intelligence, extensive range, food habits, and adaptability, as well as societal views. In North America alone, agencies receive more than 40,000 complaints about black bear annually. Black bears are known as ‘food-driven’ animals, meaning most conflicts result from a bear’s drive to meet its nutritional needs. Not surprisingly, an overwhelming proportion of conflicts are related to their use of anthropogenic (human) food sources, such as garbage, bird food, and crops. Understanding what drives human-bear conflict is the first part …

Vertebrate Natural History Notes From Arkansas, 2020, C. Renn Tumlison, Matt Connior, Blake Sasse, Henry Robison, Stan Trauth, S Higdon, L Baer, Z. Baer, R. Stinson, D. Carson, T. Inebnit, L. Lewis, Roger Perry, Ron Redman

Journal of the Arkansas Academy of Science

Smaller details of natural history often go undocumented to science if those details are not parts of larger studies, but small details can provide insights that lead to interesting questions about ecological relationships or environmental change. We have compiled recent important observations of distribution and reproduction of fishes and mammals. Included are new distributional records of mammals, and observations of reproduction in several mammals for which few data exist in Arkansas. A rare record of the Long-tailed weasel, a special of special concern in Arkansas, is documented from Newton Co. We also provide evidence that Seminole bats likely reproduce in …

The Effects Of Woody Vegetation Encroachment And Removal Within A Coastal Fen, Joseph Saler

Cal Poly Humboldt theses and projects

Early successional wetland habitat is being lost in temperate regions worldwide as a result of changes in disturbance regimes that allow for the establishment and dominance of woody species. In particular, this phenomenon is pronounced in fens, which harbor high numbers of rare herbaceous species that require early successional habitat. I investigated the relationship between woody vegetation encroachment and herbaceous species diversity within a Northern California coastal fen that has been undergoing encroachment by woody vegetation for ca. 80 years by recording species richness and cover data from 338 permanent plots throughout the fen. I also investigated the effect of …

Spatial And Temporal Genetic Structure Of Winter-Run Steelhead (Oncorhynchus Mykiss) Returning To The Mad River, California, Steven R. Fong

Cal Poly Humboldt theses and projects

Distinct populations of steelhead in the wild are in decline. The propagation of steelhead in hatcheries has been used to boost population numbers for recreational fisheries and for use in conservation. However, hatchery breeding practices of steelhead can result in changes in genetic structure. I investigated the genetic structure of winter-run steelhead (Oncorhynchus mykiss) returning to the Mad River, California, where a hatchery has been used enhance production for recreational fisheries since 1971. Genetic variability in Mad River steelhead was evaluated using 96 single nucleotide polymorphisms (SNPs) among 4203 individuals, including the Mad River and nearby locations, and …

Multivariate Habitat-Based Predictive Modeling Of Three Demersal Rockfish Species In Central California, Georgia R. Martel

Cal Poly Humboldt theses and projects

Accurate, spatially explicit models of rockfish abundance are critical in implementing ecosystem-based management strategies and designating essential fish habitats and marine protected areas. Multibeam bathymetry methods and visual, non-extractive submersible transect surveys were combined to collect environmental variables and fish abundance data at three distinct sites within the study region. Zero-adjusted models were developed using habitat classification analyses of high-resolution (5 m) digital elevation models. Model accuracies were assessed by using a reserved subset of the original datasets. To demonstrate that a model’s predictive power was linked to its spatial origins, Mean Absolute Error and coefficient of determination values were …

Sampling The Local Fare: Fishes At The Sam Israel House Pit (45gr76), Soap Lake, Washington, Adam Fruge

All Master's Theses

The Sam Israel site is a precontact archaeological complex with numerous fish bones at the north end of Soap Lake, Washington. Excavated in 1976, the fish remains recovered from there were never fully analyzed prior to this research. Since this inland Columbia Plateau site had thousands of fish bones, it contained untapped potential for our understanding of ancient local fish procurement. As such, I conducted a detailed analysis of 2,862 fish bone specimens from the Sam Israel House Pit locus to: study a larger sample of fish bones in greater detail than was done before; compare the distribution of fishes …

Diversity Analysis Of Soil Fungus Communities In Disturbed, Nursery, And Mature Forest Conditions, Dana Whitmore

All Master's Theses

Populations of soil fungi were examined in Derby Canyon Natives, Coeur d’Alene Forest Service nursery, Swamp Lake, and the Keechelus Lake wildlife overcrossing soils. All sampling sites were connected by their relation to the revegetation and native soil plug inoculation of the wildlife overpass. This study was an effort to describe soil fungi communities present on the overpass before plant introduction, those that plants would be bringing in their pots, and the fungi that could be introduced via soil plug transplantation. DNA was extracted from soil samples, then sequenced using next-generation sequencing methods, allowing for the analysis of species richness …

Ecological And Genetic Connectivity Of Shrews (Sorex Spp.) Across Interstate-90 In The Washington Cascade Range, Jordan Ryckman

All Master's Theses

Roads negatively affect wildlife by degrading and fragmenting habitat. The I-90 Snoqualmie Pass East project was established to improve traffic safety for both humans and wildlife. Here, the Washington State Department of Transportation is constructing wildlife crossing structures to increase ecosystem connectivity as part of this project. The goal of my study was to investigate shrews – very small mammals with presumably low mobility and dispersal capacity – at sites on the eastern slopes of the Cascade Range where wildlife crossing structures will be built in the future. My main objectives were to verify shrew species composition, assess population genetic …

Mixed Ancestry From Wild And Domestic Lineages Contributes To The Rapid Expansion Of Invasive Feral Swine, Timothy J. Smyser, Michael A. Tabak, Chris Slootmaker, Michael S. Robeson Ii, Ryan S. Miller, Mirte Bosse, Hendrik-Jan Megens, Martien A.M. Groenen, Samuel Rezende Paiva, Danielle Assis De Faria, Harvey D. Blackburn, Brandon S. Schmit, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive alien species are a significant threat to both economic and ecological systems. Identifying the processes that give rise to invasive populations is essential for implementing effective control strategies. We conducted an ancestry analysis of invasive feral swine (Sus scrofa, Linnaeus, 1758), a highly destructive ungulate that is widely distributed throughout the contiguous United States, to describe introduction pathways, sources of newly emergent populations and processes contributing to an ongoing invasion. Comparisons of high-density single nucleotide polymorphism genotypes for 6,566 invasive feral swine to a comprehensive reference set of S. scrofa revealed that the vast majority of feral swine were …

The Role Of European Starlings (Sturnus Vulgaris) In The Dissemination Of Multidrug- Resistant Escherichia Coli Among Concentrated Animal Feeding Operations, Jeffrey C. Chandler, Jennifer E. Anders, Nicolas A. Blouin, James C. Carlson, Jeffrey T. Lejeune, Lawrence D. Goodridge, Baolin Wang, Leslie A. Day, Anna M. Mangan, Dustin A. Reid, Shannon M. Coleman, Matthew W. Hopken, Bledar Bisha

United States Department of Agriculture Wildlife Services: Staff Publications

Antimicrobial use in livestock production is a driver for the development and proliferation of antimicrobial resistance (AMR). Wildlife interactions with livestock, acquiring associated AMR bacteria and genes, and wildlife’s subsequent dispersal across the landscape are hypothesized to play an important role in the ecology of AMR. Here, we examined priority AMR phenotypes and genotypes of Escherichia coli isolated from the gastrointestinal tracts of european starlings (Sturnus vulgaris) found on concentrated animal feeding operations (CAFOs). European starlings may be present in high numbers on cAfos (>100,000 birds), interact with urban environments, and can migrate distances exceeding 1,500 km in North …

Reporting The Limits Of Detection And Quantification For Environmental Dna Assays, Katy E. Klymus, Christopher M. Merkes, Michael J. Allison, Caren S. Goldberg, Caren C. Helbing, Margaret E. Hunter, Craig A. Jackson, Richard F. Lance, Anna M. Mangan, Emy M. Monroe, Antoinette J. Piaggio, Joel P. Stokdyk, Chris C. Wilson, Catherine A. Richter

United States Department of Agriculture Wildlife Services: Staff Publications

Background: Environmental DNA (eDNA) analysis is increasingly being used to detect the presence and relative abundance of rare species, especially invasive or imperiled aquatic species. The rapid progress in the eDNA field has resulted in numerous studies impacting conservation and management actions. However, standardization of eDNA methods and reporting across the field is yet to be fully established, with one area being the calculation and interpretation of assay limit of detection (LOD) and limit of quantification (LOQ).

Aims: Here, we propose establishing consistent methods for determining and reporting of LOD and LOQ for single‐species quantitative PCR (qPCR) eDNA studies.

Materials …

Safety, Immunogenicity, And Efficacy Of Intramuscular And Oral Delivery Of Era-G333 Recombinant Rabies Virus Vaccine To Big Brown Bats (Eptesicus Fuscus), Amy T. Gilbert, Xianfu Wu, Felix R. Jackson, Richard Franka, Gary F. Mccracken, Charles E. Rupprecht

United States Department of Agriculture Wildlife Services: Staff Publications

Attenuated strains of rabies virus (RABV) have been used for oral vaccination of wild carnivores in Europe and North America. However, some RABV vaccines caused clinical rabies in target animals. To improve the safety of attenuated RABV as an oral vaccine for field use, strategies using selection of escape mutants under monoclonal antibody neutralization pressure and reverse genetics–defined mutations have been used. We tested the safety, immunogenicity, and efficacy of one RABV construct, ERA-g333, developed with reverse genetics by intramuscular (IM) or oral (PO) routes in big brown bats (Eptesicus fuscus). Twenty-five bats received 5×10⁶ mouse intracerebral …

Psychological Drivers Of Risk-Reducing Behaviors To Limit Human–Wildlife Conflict, Stacy A. Lischka, Tara L. Teel, Heather E. Johnson, Courtney Larson, Stewart Breck, Kevin R. Crooks

United States Department of Agriculture Wildlife Services: Staff Publications

Conflicts between people and wild animals are increasing globally, often with serious consequences

for both. Local regulations or ordinances are frequently used to promote human behaviors that minimize these conflicts (risk-reducing behaviors), but compliance with ordinances can be highly variable. While efforts to increase compliance could be improved through applications of conservation psychology, little is known about the relative influence of different factors motivating compliance. Using concepts from psychology and risk theory, we conducted a longitudinal study pairing data from mail surveys with direct observations of compliance with a wildlife ordinance requiring residents to secure residential garbage from black bears …

Toadal Isolation: Genetic Connectivity Of The Western Toad (Anaxyrus Boreas) Along I-90 In The Snoqualmie Pass Area Of Washington State, Anneliese Myers

All Master's Theses

Single-nucleotide polymorphisms (SNPs) were used to assess the genetic connectivity of western toad (Anaxyrus boreas) breeding populations along Interstate-90 near Snoqualmie Pass, WA. Sites north and south of the freeway were sampled during the breeding season of 2019. SNP loci were subsequently generated using the proprietary DArTseq^TM (Canberra, ACT, Australia) method. A total of 15,468 SNPs were used to calculate pairwise F_ST values and three distinct breeding populations were identified, two north and one south of I-90. All pairwise F_ST values between these sites were low (0.02) but significantly different from 0. The lowest pairwise …

Environmental Dna Is An Effective Method To Monitor Species In Various Freshwater Habitats, Kayleigh Mullen

All Master's Theses

This research investigated the use of DNA shed from individuals into the environment (eDNA) to monitor three amphibian species and two trout species associated with habitat intersected by Interstate-90 in Snoqualmie Pass, Washington. This included a large catchment area within creeks and nearby wetlands historically affected by I-90, including sites where significant habitat improvements had been made. Species-specific primers were used to detect three focal amphibians of varying local abundance and two focal trout species. This study showed successful detection of species across both lentic and lotic systems throughout the study area through efficient multiplexing (detection of multiple species in …

Golden Eagle Resource Selection And Environmental Drivers Of Reproduction In The Northern Range Of Yellowstone National Park, David Brown Haines

Graduate Student Theses, Dissertations, & Professional Papers

In the United States (US), National Parks are considered the “crown jewels” of protected lands. However, the importance of National Parks to wildlife populations and the species that inhabit them is not often quantified, thus, requiring a better understanding of National Parks as a conservation tool. Golden eagles (Aquila chrysaetos) are a North American species of conservation concern and territories in the northern range of Yellowstone National Park (YNP) are relatively dense. However, average reproductive rates over the past ten years (2011-2020) have been low (productivity = 0.34, nest success = 28%). The contrast of high density and …

Ecologically Distinct Populations Of Hawaiian Petrel (Pterodroma Sandwichensis): Quantitative Isotopic Analysis To Explore The Uniqueness Of Foraging Habits In Kauai And Hawaii Populations, Drew Casey

Williams Honors College, Honors Research Projects

Many topics from conservation biology, evolutionary biology, and ecology will be applied to help answer the question many conservation biologists ask: is this population both genetically and ecologically distinct enough to warrant an independent conservation approach? If the answer is yes, then more resources can be distributed to conserving that population. If the answer is no, more resources can be devoted to other conservation goals, such as conserving one of the other three breeding populations of Hawaiian petrel or generally trying to maximize the overall population size of the species and possibly saving the endangered Hawaiian petrel. This will be …

Timing And Extent Of Crop Damage By Wild Pigs (Sus Scrofa Linnaeus) To Corn And Peanut Fields, C. M. Boyce, Kurt C. Vercauteren, James C. Beasley

United States Department of Agriculture Wildlife Services: Staff Publications

The global expansion of wild pigs over the last few decades has resulted in an increase in extent and distribution of damages to crops, placing a growing strain on agricultural producers and land managers. Despite the extent of wild pig damage to agriculture, there is little data regarding timing and spatial variability of damage to corn (Zea mays Linnaeus) and we found no data regarding the effect of these factors on peanuts (Arachis hypogaea Linnaeus). Our objective was to determine the timing and extent of wild pig damage to corn and peanut fields, as well as the extent …