Ecology and Evolutionary Biology Commons^™

A Male Spider’S Ornamentation Polymorphism Maintained By Opposing Selection With Two Niches, Bo Deng, Alex Estes, Brett Grieb, Douglas Richard, Brittney Hinds, Eileen Hebets

Eileen Hebets Publications

The Levene mechanism to maintain genotypic polymorphism by opposing selection on genotypes in multiple niches was proposed 60 years ago, and yet no systems were found to satisfy the mechanisms rather restrictive conditions. Reported here is such an example that a wolf spider population lives in a habitat of mixed rocks and leafy litter for which the females are phenotypically indistinguishable and the males have two distinct phenotypes subject to opposing selection with respect to the substrates. Census data is best-fitted to a population genetics model of the Levene type. A majority of the best fit support polymorphism, with many …

Transcriptomic Insights Into The Diplontic Life History Of Diatoms, Colton Richard Kessenich

Graduate Theses and Dissertations

An organism's life cycle is the direct result of its evolutionary history and represents a fundamental aspect of its ancestry and ecology. Yet the process of linking alternating life-history stages has proven to be challenging, if not impossible in some cases. Diatoms (Bacillariophyceae) are no exception to this challenge, and their diversity of life stages and reproductive strategies add further challenges. A central focus of diatom research has been to unravel the evolutionary events that led to their extraordinary diversity, a line of inquiry that has been greatly aided by the availability of next-generation sequence data. Yet without proper taxonomic …

Pelargonium (Geraniaceae) And The Long-Tongued Fly Pollination Guild: Coevolution And Polymorphism In A Specialized Pollination System, Emily M. Blank

Honors Scholar Theses

In South Africa, a group of long-tongued flies and the flowering plants they pollinate form a unique and diverse pollination guild system almost entirely endemic to the Greater Cape Floristic Region. This system makes up only a small portion of the biodiversity of the Region, but it is likely a key to understanding the evolutionary processes that have lead to the observed biodiversity. Aside from its unusual pollinators, this guild system is of particular interest due to the extremely labile morphology of both the fly species and the associated flowering plant species, which geographically vary significantly in proboscis lengths and …

Inter-And Intra-Population Variability Across The Transcriptome Of Lake Baikal’S Endemic Copepod With Ramifications For Adapting To Climate Change, Larry L. Bowman Jr

Electronic Theses and Dissertations

The future of Lake Baikal’s biodiversity is uncertain in response to climate change. Unlike its diverse benthos, Lake Baikal’s zooplankton is species poor, with up to 96% of its biomass being composed of a single Calanoid copepod species, Epischura baikalensis. This study characterizes the genetic differentiation and differential gene expression of E. baikalensis. Using partial-transcriptome sequences obtained by 454 Rosche and Illumina sequencing technologies, the genetic differentiation at inferred single nucleotide polymorphism (SNP) sites and differential gene expression in populations sampled from various parts of the lake were analyzed. The functional genomics of genes showed significant differential …

Evolutionary Pressures On Primate Intertemporal Choice, Jeffrey R. Stevens

Department of Psychology: Faculty Publications

From finding food to choosing mates, animals must make intertemporal choices that involve fitness benefits available at different times. Species vary dramatically in their willingness to wait for delayed rewards. Why does this variation across species exist? An adaptive approach to intertemporal choice suggests that time preferences should reflect the temporal problems faced in a species' environment. Here, I use phylogenetic regression to test whether allometric factors (relating to body size), relative brain size, and social group size predict how long 13 primate species will wait in laboratory intertemporal choice tasks. Controlling for phylogeny, a composite allometric factor that includes …

Body Size And Species Richness Changes In Glyptosaurinae (Squamata: Anguidae) Through Climatic Transitions Of The North American Cenozoic, Sara Elshafie

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

Poikilothermic vertebrates offer excellent climate proxies based on relationships between environment and measurable variables such as body size and species richness. Relationships of these variables in lizards to environmental transitions over long time scales are poorly understood. Here I show that patterns of body size and species richness in a lizard clade, Glyptosaurinae (Squamata: Anguidae), correspond to known histories of paleotemperatures through the Cenozoic of North America. Glyptosaurines have the richest fossil record among North American Cenozoic lizards and exhibit a wide range of skull sizes. In order to estimate body size for glyptosaurines and other fossil anguids, I collected …

Fossil Crocodilians From The High Guajira Peninsula Of Colombia, And The History Of Neogene Crocodilian Diversity In Tropical South America, Jorge W. Moreno-Bernal

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

The greatest diversity of Cenozoic crocodilians occurred during the Miocene in equatorial South America. However, the origin of this high diversity and its relationship to environmental factors are poorly understood. Most described species come from localities assigned to Laventan (13.8-11.8 Ma) and Huayquerian (9.0-6.8 Ma) South American land mammal ages (SALMAS), whereas the record is sparse in the early to middle Miocene and after the latest Miocene and Pliocene. Field research in the Castilletes (early Miocene-Pliocene) Formation in the High Guajira Peninsula of Colombia provides new fossil data on the origin of Neotropical crocodylian diversity. The Castilletes Formation crops out …

Evolutionary Change In Continuous Reaction Norms, Courtney J. Murren, Heidi J. Maclean, Sarah E. Diamond, Ulrich K. Steiner, Mary A. Heskel, Corey A. Handelsman, Cameron K. Ghalambor, Josh R. Auld, Hilary S. Callahan, David W. Pfennig, Rick A. Relyea, Carl D. Schlichting, Joel Kingsolver

Biology Faculty Publications

No abstract provided.

A Phylogenetic Reevaluation Of The Genus Gavia (Aves: Gaviiformes) Using Next-Generation Sequencing, Quentin D. Sprengelmeyer

All NMU Master's Theses

Avian phylogenetic analysis based on DNA sequences, rather than morphological characters, has been used in recent decades to resolve systematic relationships. Advancements in molecular techniques have improved avian phylogenetics and have led to new insights on the relationships between and within taxa. Loons (Aves: Gaviiformes) are one of the oldest living lineages of birds, and the order includes five extant species. The morphological cladogram of Gavia placed G. arctica as a sister species to G. pacifica. However, a more recent study based on mtDNA resulted in a discordant tree splitting the G. arctica/G. pacifica clade, and …

Stress Responses And Energy Storage In Drosophila Melanogaster Selected For Resistance To A Gram-Positive Bacillus Cereus Spores, Zhen Hu

School of Biological Sciences: Dissertations, Theses, and Student Research

A survival response study was carried out by using D. melanogaster and the opportunistic pathogen B. cereus as the agent of selection. The spores of B. cereus, a gram-positive bacteria that can cause the human pathogen disease, were applied in our artificial laboratory selection. Selected lines were treated with B. cereus spores. Wound control lines were punctured with a needle dipped into sterile H₂O. Control lines did not apply any treatment. Three different environmental treatments were used within each line type (autoclaved spores of B.cereus, sterile H₂O and no treatment). The autoclaved spores were …

Pathways Of Embodiment: Drug Use Among Adolescents In Popay[Aacute]N Colombia, Sarah Louise Fishleder

USF Tampa Graduate Theses and Dissertations

This research examines the interrelated biological and cultural factors that determine pathways by which recreational drug use is manifest to addiction in the lives of youth aged 12-18 in Popay[aacute]n, Colombia. It utilizes existing data from mixed methods research conducted between 2004-2005 examining epidemiological risk factors, drug use, perceptions about drugs, and a biological phenomenon of the brain known as incentive salience. Perceptions and experiences related to drugs were gathered using structured methods. MDS and hierarchical plots of drug perceptions are presented in order to demonstrate the power of culture and expectation on perception and choice. Structural equation modeling was …

Conservative Evolution, Sustainability, And Culture, Gábor Náray-Szabó

CLCWeb: Comparative Literature and Culture

In his article "Conservative Evolution, Sustainability, and Culture" Gábor Náray-Szabó argues that evolution is conservative in the sense that throughout the history of the universe old constructs like elementary particles, amino acids, and living cells remained conserved while the world evolved/evolves in complexity. A similar process can be observed in cultural evolution as components of society and culture continue to evolve. Considering the increasing pressure on natural resources by material consumption, a close alliance between past, present, and future generations is unavoidable and thus Náray-Szabó posits that concepts of conservative evolution and sustainability are related. However, in order to avoid …

Insights Into The Development And Evolution Of Exaggerated Traits Using De Novo Transcriptomes Of Two Species Of Horned Scarab Beetles, Ian A. Warren, J. Cristobal Vera, Annika Johns, Robert Zinna, James H. Marden, Douglas J. Emlen, Ian Dworkin, Laura C. Lavine

Biological Sciences Faculty Publications

Scarab beetles exhibit an astonishing variety of rigid exo-skeletal outgrowths, known as ‘‘horns’’. These traits are often sexually dimorphic and vary dramatically across species in size, shape, location, and allometry with body size. In many species, the horn exhibits disproportionate growth resulting in an exaggerated allometric relationship with body size, as compared to other traits, such as wings, that grow proportionately with body size. Depending on the species, the smallest males either do not produce a horn at all, or they produce a disproportionately small horn for their body size. While the diversity of horn shapes and their behavioural ecology …

A Conceptual Framework For Clutch-Size Evolution In Songbirds, Thomas E. Martin

Wildlife Biology Faculty Publications

Causes of evolved differences in clutch size among songbird species remain debated. I propose a new conceptual framework that integrates aspects of traditional life-history theory while including novel elements to explain evolution of clutch size among songbirds. I review evidence that selection by nest predation on length of time that offspring develop in the nest creates a gradient in offspring characteristics at nest leaving (fledging), including flight mobility, spatial dispersion, and self-feeding rate. I postulate that this gradient has consequences for offspring mortality rates and parental energy expenditure per offspring. These consequences then determine how reproductive effort is partitioned among …

Primate Energy Eexpenditure And Life History, Herman Pontzer, David A. Raichlen, Adam D. Gordon, Kara K. Schroepfer-Walker, Brian Hare, Matthew C. O’Neill, Kathleen M. Muldoon

Dartmouth Scholarship

Humans and other primates are distinct among placental mammals in having exceptionally slow rates of growth, reproduction, and aging. Primates’ slow life history schedules are generally thought to reflect an evolved strategy of allocating energy away from growth and reproduction and toward somatic investment, particularly to the development and maintenance of large brains. Here we examine an alternative explanation: that primates’ slow life histories reflect low total energy expenditure (TEE) (kilocalories per day) relative to other placental mammals. We compared doubly labeled water measurements of TEE among 17 primate species with similar measures for other placental mammals. We found that …

Developmental Link Between Sex And Nutrition; Doublesex Regulates Sex-Specific Mandible Growth Via Juvenile Hormone Signaling In Stag Beetles, Hiroki Gotoh, Hitoshi Miyakawa, Asano Ishikawa, Yuki Ishikawa, Yasuhiro Sugime, Douglas J. Emlen, Laura C. Lavine, Toru Miura

Biological Sciences Faculty Publications

Sexual dimorphisms in trait expression are widespread among animals and are especially pronounced in ornaments and weapons of sexual selection, which can attain exaggerated sizes. Expression of exaggerated traits is usually male-specific and nutrition sensitive. Consequently, the developmental mechanisms generating sexually dimorphic growth and nutritiondependent phenotypic plasticity are each likely to regulate the expression of extreme structures. Yet we know little about how either of these mechanisms work, much less how they might interact with each other. We investigated the developmental mechanisms of sex-specific mandible growth in the stag beetle Cyclommatus metallifer, focusing on doublesex gene function and its …

A Unique Covalent Bond In Basement Membrane Is A Primordial Innovation For Tissue Evolution, Aaron L. Fidler, Roberto M. Vanacore, Sergei V. Chetyrkin, Vadim K. Pedchenko, Gautam Bhave, Viravuth P. Yin, Cody L. Stothers, Kristie Lindsey Rose, W. Hayes Mcdonald, Travis A. Clark, Dorin-Bogdan Borza, Robert E. Steele, Michael T. Ivy, The Aspirnauts, Julie K. Hudson, Billy G. Hudson

Biology Faculty Research

We recently discovered that the collagen IV scaffolds of bovine, mouse, and Drosophila melanogaster tissues are stabilized by sulfilimine chemical bonds (S = N) (20⇓–22). The bond is a covalent cross-link between methionine-93 (Met93) and lysine-211 or hydroxylysine-211 (Lys211/Hyl211) residues that stabilizes the noncollagenous (NC1) interface of adjoining triple helical protomers (Fig. 1A). Peroxidasin, an animal heme peroxidase embedded in basement membrane, forms these sulfilimine cross-links by producing hypohalous acids as intermediates for Met93 oxidization (21, 22). Here, we explored whether the sulfilimine cross-link of collagen IV is a fundamental requirement in the genesis and evolution of tissues in Eumetazoa. …

Rates And Modes Of Sequence Evolution In Various Lineages Within Chenopodiaceae, James Andrew Naeger

Wayne State University Theses

Sexual dimorphism in domesticated spinach, Spinacia oleracea, is thought to be determined by differential expression of floral organ identity genes. We examined the floral organ morphologies of seven species in the Chenopodiaceae, including two wild species of spinach, in order to gain insight into the evolution of floral reproductive strategy in this clade. The species within the Anserineae demonstrate extensive evolution in floral morphology and reproductive strategy, and Spinacia is unique for having been domesticated rather recently and for being dioecious. We found C. album to be hermaphroditic, C. foliosum and M. nuttalliana to be gynomonoecious, while C. bonus-henricus …

Evolution, Snakes, And God: A Brief Argument For Agreement, Jessica Stanze

A with Honors Projects

Comparing the evolution and religious connotations of the snake, this short essay suggests that evolutionists and creationists might reach common ground if they attempted to collaborate.

Effects Of Toxic Cyanobacteria (Microcystis Aeruginosa) On The Feeding And Reproduction Ecology Of The Copepod Eurytemora Affinis From Green Bay, Lake Michigan, Nicholas J. Barrett

Lawrence University Honors Projects

Toxic Cyanobacteria is known to be a bad food source to consumers as well as a main contributor to harmful algal blooms. This study investigates the feeding relationship between an invasive copepod in the Great Lakes system, Eurytemora affinis, and a toxic strain of cyanobacteria, Microcystis aeruginosa. E.affinis has been shown to feed on toxic cyanobacteria. By measuring the filtering rate, ingestion rate, egg production and offspring size between three different food conditions, we hope to gain insight into the effects of toxic cyanobacteria on the feeding and reproduction of this copepod. Food sources include a good green algal …

Phenotypic Variation In Native North American And Invasive Chinese Populations Of Plantago Virginica, Teresa E. Popp

College of Graduate Studies: Theses & Dissertations

Alien plant species can cause significant economic and biological destruction by invading new environments and outcompeting native species. Through experimental research, the mechanisms by which these species invade can be better understood and applied to their management. Plantago virginica is a perennial herb, native to North America that has recently invaded China. It has been known to reduce crop growth and harbor diseases in the introduced range. A common garden study was conducted at the Georgia Southern University greenhouse, comparing twenty populations of P. virginica from both the native North American and invasive Chinese ranges. I examined if there were …

Endogenous Ros Levels In C. Elegans Under Exogenous Stress Support Revision Of Oxidative Stress Theory Of Life-History Tradeoffs, Samson W. Smith, Leigh C. Latta Iv, Dee R. Denver, Suzanne Estes

Biology Faculty Publications and Presentations

Background: The oxidative stress theory of life-history tradeoffs states that oxidative stress caused by damaging free radicals directly underpins tradeoffs between reproduction and longevity by altering the allocation of energetic resources between these tasks. We test this theory by characterizing the effects of exogenous oxidative insult and its interaction with thermal stress and diet quality on a suite of life-history traits and correlations in Caenorhabditis elegans nematodes. We also quantify demographic aging rates and endogenous reactive oxygen species (ROS) levels in live animals.

Results: Our findings indicate a tradeoff between investment in reproduction and antioxidant defense (somatic maintenance) consistent with …

Patterns Of Maximum Body Size Evolution In Cenozoic Land Mammals: Eco-Evolutionary Processes And Abiotic Forcing, Juha J. Saarinen, Alison G. Boyer, James H. Brown, Daniel P. Costa, S.K. Morgan Ernest, Alistair R. Evans, Mikael Fortelius, John L. Gittleman, Marcus J. Hamilton, Larisa E, Harding, Kari Lintulaakso, S. Kathleen Lyons, Jordan G. Okie, Richard M. Sibly, Patrick R. Stephens, Jessica Theodor, Mark D. Uhen, Felisa A. Smith

School of Biological Sciences: Faculty Publications

There is accumulating evidence that macroevolutionary patterns of mammal evolution during the Cenozoic follow similar trajectories on different continents. This would suggest that such patterns are strongly determined by global abiotic factors, such as climate, or by basic eco-evolutionary processes such as filling of niches by specialization. The similarity of pattern would be expected to extend to the history of individual clades. Here, we investigate the temporal distribution of maximum size observed within individual orders globally and on separate continents. While the maximum size of individual orders of large land mammals show differences and comprise several families, the times at …

Recognition Of Two New Species Of Freshwater Crabs From The Seychelles Based On Molecular Evidence (Potamoidea: Potamonautidae)., Neil Cumberlidge, Savel Regan Daniels Phd

Journal Articles

The Afrotropical freshwater crab genus Seychellum is endemic to the granitic Seychelles in the Indian Ocean (Mahé, Silhouette, Praslin, La Digue and Frégate). Here we describe two new cryptic species of Seychellum that represent two evolutionarily separate lineages of a previously monotypic genus. This raises to three the number of species of freshwater crabs known from Seychelles. Each species is endemic to either one island (Silhouette) or to a pair of islands (Mahé and Frégate, or Praslin and La Digue). The three species can be clearly distinguished as separate lineages by DNA analysis, haplotyping and examination of gonopod characters. The …

Generalist And Specialist Pollination Syndromes: When Are They Favoured? A Theoretical Approach To Predict The Conditions Under Which A Generalist Or Specialist Pollination Syndrome Is Favoured., Tyler L. Poppenwimer

Senior Independent Study Theses

No abstract provided.

Lineage-Specific Transcriptional Profiles Of Symbiodinium Spp. Unaltered By Heat Stress In A Coral Host, Daniel J. Barshis, Jason T. Ladner, Thomas A. Oliver, Stephen R. Palumbi

Biological Sciences Faculty Publications

Dinoflagellates of the genus Symbiodinium form an endosymbiosis with reef building corals, in which photosynthetically derived nutrients comprise the majority of the coral energy budget. An extraordinary amount of functional and genetic diversity is contained within the coral-associated Symbiodinium, with some phylotypes (i.e., genotypic groupings), conferring enhanced stress tolerance to host corals. Recent advances in DNA sequencing technologies have enabled transcriptome-wide profiling of the stress response of the cnidarian coral host; however, a comprehensive understanding of the molecular response to stress of coral-associated Symbiodinium, as well as differences among physiologically susceptible and tolerant types, remains largely unexplored. Here, …

Tactical Escape Behavior And Performance Of A Small Sceloporine Lizard In Two High Risk Habitats, Seth Parker

College of Graduate Studies: Theses & Dissertations

The negotiation of uneven and complex terrain has implications for many small terrestrial vertebrates. Variation in the running surface due to obstacles like woody debris or vegetation can alter escape paths and running performance. Additionally, these microhabitat features can influence behavioral tactics in complex environments. The ability to negotiate physical barriers in dense environments likely influences survivorship through important ecological tasks, such as finding mates, foraging, and evading predators. The Florida scrub lizard (Sceloporus woodi) is a small, rare species endemic to two distinct and structurally complex environments in Florida, i.e. sand-pine scrub and longleaf pine-wiregrass sand-hills. The …

The Prevalence And Effect Of Wolbachia Infection On The Brown Widow Spider (Latrodectus Geometricus), Brittany Dane' Arrington

College of Graduate Studies: Theses & Dissertations

Wolbachia was recently identified in the Brown Widow Spider (Latrodectus geometricus). This symbiont has not previously been found in this genus, therefore the consequences on the host’s population dynamics are unknown. The frequency of endosymbiont infection can provide insight into the population dynamics of the host as this bacteria is known to alter host life history. In my 1^st chapter I determine the prevalence of Wolbachia pipentis infection in in the Brown Widow Spider (Latrodectus geometricus) from five locations in the Southeastern United States. Infection frequency differed significantly among sampling locations, ranging from 20% to …

Causes And Consequences Of Female Mate Choice In Drosophila Melanogaster: A Hemiclonal Analysis, Hannah Me Tennant

Theses and Dissertations (Comprehensive)

One of Darwin’s greatest questions, the reason why females prefer elaborate sexually selected male traits and displays, was elucidated by the Fisherian coevolution of male traits and female preferences. While variation in male attractiveness and ornamentation has received much attention, there has been little attempt to evaluate the causes and consequences of intraspecific variation in components of female preference. Furthermore, demonstrating a genetic basis to female preference does not answer the question of how within-population genetic variation is maintained.

Understanding the sources of variation in potential mating interactions between males and females is important because this variation determines the strength …

The Distribution Of Fitness Effects Of Spontaneous Mutations In Vibrio Fischeri, Chelsea K. Jones

Honors Theses and Capstones

Mutations are the ultimate source of the biological diversity on which natural selection acts, but the vast majority of these mutations are harmful. As such, mutations lead to disease states like cancer, extinction of small populations, and can drive pathogen evolution. Unfortunately, because mutations are rare and past studies have been subject to detection biases, very little is known about the distribution of fitness effects from naturally occurring mutations. In this study, we used mutation accumulation and full genome sequencing to capture naturally occurring mutations before they were exposed to the sieve of natural selection in Vibrio fischeri. We …