Ecology and Evolutionary Biology Commons^™

Ecological Consequences Of Personality In A Guild Of Terrestrial Small Mammals: From Trappability To Seed Dispersal, Allison M. Brehm

Electronic Theses and Dissertations

Individual animals exhibit consistent behavioral tendencies over time and across contexts that have been termed personalities. Personality encapsulates an individual’s unique way of behaving and responding to life’s challenges, and since individuals vary in both personality type and their ability to exhibit behavioural plasticity, there are important links between an individual’s personality and its response to a changing environment; resulting in the study of animal personalities becoming increasingly popular in recent years. Previous research suggests that personality traits measured through standardized behavioural tests predict trappability (i.e. ‘trap happiness’ versus ‘trap shyness’). This relationship has been explored only within single …

A Change In Grain? Diet Induced Plasticity In The Generalist Grasshopper Melanoplus Differentialis, Austin M. Culotta

University of New Orleans Theses and Dissertations

Phenotypic plasticity is favored in heterogeneous environments in which alternative phenotypes can exploit alternative resources. However, it’s not clear whether phenotypic plasticity is useful in environments that become more homogenous over an organism’s life cycle. I studied a population of grasshopper Melanoplus differentialis that experiences high resource diversity as nymphs but low resource diversity as adults to determine if individuals can undergo diet-induced morphological plasticity in head shape to increase biting ability and ingestion of hard diets. Insects on a soft diet were larger and had greater bite force than those on a hard diet. Head structures related to chewing …

Scorpions Of The Horn Of Africa (Arachnida, Scorpiones). Part Xvii.Revision Of Neobuthus, With Description Of Seven New Species From Ethiopia, Kenya And Somaliland (Buthidae), František Kovařík, Graeme Lowe, Ahmed Ibrahim Awale, Hassan Sh Abdirahman Elmi, Ali Abdi Hurre

Euscorpius

New information about the taxonomy and distribution of the genus Neobuthus Hirst, 1911 is presented, based on material recently collected mainly from Somaliland, but also Djibouti and Kenya. Emended diagnoses are proposed for N. berberensis Hirst, 1911 and N. ferrugineus (Kraepelin, 1898) sensu stricto. New species described are: N. amoudensis sp. n. from Ethiopia and Somaliland; N. erigavoensis sp. n., N. factorio sp. n., N. gubanensis sp. n., N. maidensis sp. n., and N. montanus sp. n. from Somaliland; and N. kloppersi sp. n. from Kenya. This doubles the number of species in Neobuthus, unearthing a rich diversification …

The Evolution Of Diet Breadth In Melissodes Bees (Apidae: Eucerini), Karen W. Wright

Biology ETDs

The relationship between phytophagous insects and their host plants has interested scientists since Darwinian times. Using modern phylogenetic inference, we are able to investigate these patterns using, not only the phylogenies of the insects, but the evolutionary relationships among the plants they feed on as well. The relationships between bees and the plants they pollinate were traditionally seen as mutualistic and were treated separately from the research investigating the antagonistic relationships between phytophagous insects and their host plants. However, recent phylogenetic studies have made great progress including bee-host relationships in with the larger body of work on phytophagous insects.

The …

Revision Of The Central Asian Scorpion Genus Anomalobuthus Kraepelin, 1900, With Descriptions Of Three New Species And A Generic Synonymy (Scorpiones: Buthidae), Rolando Teruel, František Kovařík, Victor Fet

Euscorpius

We revise the Central Asian endemic genus Anomalobuthus Kraepelin, 1900, which was considered monotypic for more than 100 years until the recent addition of a second species from Iran (Teruel et al., 2014). We redefine the generic diagnosis of Anomalobuthus and reveal that it is composed of no less than six species, three of which are described as new: A. krivochatskyi, sp. n. (central Uzbekistan and extreme southern Kazakhstan), A. lowei, sp. n. (southeastern Kazakhstan), and A. pavlovskyi, sp. n. (south-central Kazakhstan and extreme northern Turkmenistan). The monotypic genus Psammobuthus Birula, 1911 (described from the Ferghana Valley …

Genetic Basis Of Thermal Divergence In Saccharomyces Species, Xueying C. Li

Arts & Sciences Electronic Theses and Dissertations

The genetic architecture of phenotypic divergence is a central question in evolutionary biology. Genetic architecture is impacted by whether evolution occurs through accumulation of many small-effect or a few large-effect changes, the relative contribution of coding and cis-regulatory changes, and the prevalence of epistatic effects. Our empirical understanding of the genetic basis of evolutionary change remains incomplete, largely because reproductive barriers limit genetic analysis to those phenotypes that distinguish closely related species. In this dissertation, I use hybrid genetic analysis to examine the basis of thermal divergence between two post-zygotically isolated species, Saccharomyces cerevisiae and S. uvarum. S. cerevisiae is …

Grammar And Variation: Understanding How Cis-Regulatory Information Is Encoded In Mammalian Genomes, Dana Michele King

Arts & Sciences Electronic Theses and Dissertations

Understanding how genotype leads to phenotype is key to understand both the development and dysfunction of complex organisms. In the context of regulating the gene expression patterns that contribute to cell identity and function, the goal of my thesis research is to how changes in genome sequence may impact impact gene expression by determining how sequence features contribute to regulatory potential. To accomplish this goal, I first leveraged the key regulatory role of pluripotency transcription factors (TFs) in mouse embryonic stem cells (mESCs) and tested synthetically generated and genomic identified combinations of binding site for four TFs, OCT4, SOX2, KLF4, …

Use Of Co-Immunoprecipitations And 2d Gel Electrophoresis To Identify Protein-Protein Interactions Of Maturase K, Lauren Angello

Honors Theses

Maturase K (MatK) is the only group II intron encoded protein in the chloroplast of land plants. Maturases are prokaryotic enzymes that catalyze formation of the lariat structure needed for intron removal from precursor RNAs. The chloroplast maturase MatK, is a descendant of prokaryotic maturases, however, unlike its prokaryotic relatives, MatK is thought to catalyze excision of, not only its own intron, but also the introns of other group II introns in the plastome. Similar to the multiprotein and snRNA spliceosomal complex of the nucleus, it is postulated that MatK is not working alone to excise these introns but most …

Accumulation And Transmission Dynamics Of A Naturally-Occurring Mtdna Deletion In Caenorhabditis Briggsae, Jennifer Anne Sullins

Dissertations and Theses

Maintaining mitochondrial genome sequence integrity is essential for preserving normal mitochondrial function. Several human diseases have been associated with heteroplasmic mitochondrial genome mutations, but few genetic systems can simultaneously represent pathogenic mitochondrial genome evolution and inheritance. The nematode Caenorhabditis briggsae is one such model. Natural C. briggsae isolates are globally-distributed and phylogenetically grouped into three distinct clades, with isolates exhibiting varying levels of a large-scale mtDNA deletion, nad5∆. Furthermore, a small subset of clade II isolates exhibits putative compensatory mutations that may reduce the risk of deletion formation and accumulation in those populations. In this thesis, the author characterizes the …

Actuarial Senescence In A Dimorphic Bird: Different Rates Of Ageing In Morphs With Discrete Reproductive Strategies, M. L. Grunst, A. S. Grunst, Vincent A. Formica, M. L. Korody, A. M. Betuel, M. Barcelo-Serra, R. A. Gonser, E. M. Tuttle

Biology Faculty Works

It is often hypothesized that intra-sexual competition accelerates actuarial senescence, or the increase in mortality rates with age. However, an alternative hypothesis is that parental investment is more important to determining senescence rates. We used a unique model system, the white-throated sparrow (Zonotrichia albicollis), to study variation in actuarial senescence. In this species, genetically determined morphs display discrete mating strategies and disassortative pairing, providing an excellent opportunity to test the predictions of the above hypotheses. Compared to tan-striped males, white-striped males are more polygynous and aggressive, and less parental. Tan-striped females receive less parental support, and invest more into parental …

Courtship Behavior, Communication, And Copulation In Tigrosa Annexa, Samuel White

Scholars Week

The evolution of multimodal communication, where signalers use multiple signal components in multiple sensory modalities, has become the subject of investigation by many researchers. Signaling puts males at risk of predation, so why do males of some species evolve extra signals that may increase this risk? In some wolf spider species, males incorporate many visual and vibrational signals into a display that they use to attract a female for mating. Female spiders are often aggressive toward courting males and so the male display also functions to decrease the odds of cannibalism. Female wandering spiders deposit silk containing pheromones that communicate …

Spatial And Temporal Patterns Of Neutral And Adaptive Genetic Variation In The Alpine Butterfly, Parnassius Smintheus, Maryam Jangjoo

Electronic Thesis and Dissertation Repository

Understanding how much genetic diversity exists in populations, and the processes that maintain that diversity, has been a central focus of population genetics. The evolutionary processes that determine patterns of genetic diversity depend on underlying ecological processes such as dispersal and changes in population size. In this thesis, I examine the influence of dispersal and population dynamics on neutral and adaptive genetic variation in a naturally occurring network of populations of the alpine butterfly, Parnassius smintheus.

My first objective was to determine the combined consequences of demographic bottlenecks and dispersal on neutral genetic variation within and among populations. Using …

The Paradoxical Giant Hummingbird: Comparison Of Andean And Coastal Subspecies With Respect To Blood, Migration, And Genes, Jessie L. Williamson

Shared Knowledge Conference

The Giant Hummingbird (Patagona gigas) is twice as large as the next largest hummingbird species and has long been considered paradoxical with respect to flight biomechanics. It is also an extreme outlier in other respects. For example, it is the only hummingbird species that breeds above 4,000 m elevation and also along the beaches of the Pacific Ocean. The high Andean populations of Giant Hummingbird (P. g. peruviana) that we have studied previously have a beta-hemoglobin genotype (serine at beta-hemoglobin A positions 13 and 83) that is characterized by high O2-affinity and is only shared with four unrelated hummingbird taxa …

An Integrative Approach To Understanding Morphological Novelties: Anatomy, Development, Genetics, And Evolution Of An Extreme Craniofacial Trait In East African Cichlids, Moira R. Conith

Doctoral Dissertations

Phenotypic novelties are an important but poorly understood category of morphological diversity that are often associated with elevated rates of diversification and/or ecological success. The aim of this dissertation is to explore a phenotypic novelty at many levels to contribute to our understanding of how these unique traits can arise (e.g., genetically, developmentally, and evolutionarily) as well as their ecological consequences (e.g., trait function). The extreme snout of the Lake Malawi cichlid fish Labeotropheus is used as a case study. The first chapter establishes the Labeotropheus snout as a model of phenotypic novelty by characterizing the gross morphology, genetic architecture, …

Local Adaptation In Mainland Anole Lizards: Integrating Population History And Genome–Environment Associations, Ivan Prates, Anna Penna, Miguel Trefaut Rodrigues, Ana Carolina Carnaval

Publications and Research

Environmental gradients constrain physiological performance and thus species’ ranges, suggesting that species occurrence in diverse environments may be associated with local adaptation. Genome–environment association analyses (GEAA) have become central for studies of local adaptation, yet they are sensitive to the spatial orientation of historical range expansions relative to landscape gradients. To test whether potentially adaptive genotypes occur in varied climates in wide‐ranged species, we implemented GEAA on the basis of genomewide data from the anole lizards Anolis ortonii and Anolis punctatus, which expanded from Amazonia, presently dominated by warm and wet settings, into the cooler and less rainy Atlantic …

Variation And Evolution Of Fruit Ripening Traits In Tomato Species, Ian M. Gillis

Doctoral Dissertations

As angiosperm seeds mature within their ovaries, ovary tissue tends to grow and transform itself into fruit, which aids the success of the seeds. Fruits that are fleshy provide numerous ways to aid in the protection and the dispersal of seeds. First, they keep seeds hidden, encased in hard walls, surrounded by poisons and unpalatable compounds, and second, they undergo developmental changes that facilitate seeds’ release. Tomatoes, a model fleshy fruit, have all these protective traits, and over the course of ripening they become the familiar fruit that is a staple crop around the world. The wild relatives of cultivated …

Review Of The Family Rivulidae (Cyprinodontiformes, Aplocheiloidei) And A Molecular And Morphological Phylogeny Of The Annual Fish Genus Austrolebias Costa 1998, Marcelo Loureiro, Rafael O. De Sá, Sebastián W. Serra, Felipe Alonso, Luis Esteban Krause Lanés, Matheus Vieira Volcan, Pablo Calviño, Dalton Nielsen, Alejandro Duarte, Graciela Garcia

Biology Faculty Publications

The family Rivulidae is the fourth most diverse clade of Neotropical fishes. Together with some genera of the related African family Nothobranchiidae, many rivulids exhibit a characteristic annual life cycle, with diapausing eggs and delayed embryonic development, which allows them to survive in the challenging seasonal ponds that they inhabit. Rivulidae also includes two species known as the only the self-fertilizing vertebrates and some species with internal fertilization. The first goal of this article is to review the systematics of the family considering phylogenetic relationships and synapomorphies of subfamilial clades, thus unifying information that is dispersed throughout the literature. From …

Stochastic Difference Model For Evolutional Dynamics Of Large Antigen Repertoires In African Trypanosomes, Fan Yu

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Notes On The Genera Buthacus, Compsobuthus, And Lanzatus With Several Synonymies And Corrections Of Published Characters (Scorpiones: Buthidae), František Kovařík

Euscorpius

The taxonomic position of Buthacus armasi Lourenço, 2013, B. clevai Lourenço, 2001, B. huberi Lourenço, 2001, B. maliensis Lourenço & Qi, 2007, B. nigerianus Lourenço & Qi, 2006, Compsobuthus andresi Lourenço, 2004, C. simoni Lourenço, 1999, C. tassili Lourenço, 2010, C. tofti Lourenço, 2001, C. williamsi Lourenço, 1999, and Sabinebuthus elegans Lourenço, 2001 is revised and fictitious characters in their original descriptions are discussed and corrected. Buthacus armasi Lourenço, 2013 is synonymized with Buthacus leptochelys (Ehrenberg, 1829) syn. n., B. huberi Lourenço, 2001 is confirmed to be a synonym of Buthacus occidentalis Vachon, 1953, B. maliensis Lourenço & Qi, …

Males And Females Evolve Riskier Traits In Populations With Eavesdropping Parasitoids, Oliver M. Beckers, William E. Wagner

School of Biological Sciences: Faculty Publications

Predation and/or parasitism often limits the evolution of conspicuous male traits and female preferences because conspicuous traits can attract predators or parasites and it is costly for females to associate with males that attract predators or parasites. As a result, males and females in high-risk populations are expected to evolve safer mating behaviors compared to individuals from low-risk populations. We tested this antagonistic selection hypothesis in the field cricket Gryllus lineaticeps. Males produce chirped songs, and both female crickets and the eavesdropping parasitoid fly Ormia ochracea prefer faster chirp rates. The flies attack the field crickets late in the …

Three New Chaerilus From Malaysia (Tioman Island) And Thailand (Scorpiones: Chaerilidae), With A Review Of C. Cimrmani, C. Sejnai, And C. Tichyi, František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

Chaerilus majkusi sp. n. from Malaysia (Tioman Island), C. neradorum sp. n. and C. stockmannorum sp. n. from Thailand are described and fully illustrated with color photographs of live and preserved specimens, as well as of their habitat. They are compared to the species C. cimrmani Kovařík, 2012, C. sejnai Kovařík, 2005, and C. tichyi Kovařík, 2000, which we also illustrate with color photographs of live unpublished specimens. Hemispermatophores of C. cimrmani, C. majkusi sp .n., C. stockmannorum sp. n., and C. tichyi are illustrated and compared, and we also describe the karyotypes of C. cimrmani, C. …

Confirming World-Wide Distribution Of An Agriculturally Important Lacewing, Chrysoperla Zastrowi Sillemi, Using Songs, Morphology, Mitochondrial Gene Sequencing, And Phylogenetic Reconstruction, Zoe Mandese

Honors Scholar Theses

The Chrysoperla carnea-group of green lacewings is a cryptic species complex. Species within the group are morphologically similar, yet isolated from one another via reproductive mating song. Chrysoperla zastrowi, a species within the carnea-group, is currently described with a distribution ranging from South Africa to the Middle East and India. However, recent collections of carnea-group lacewings from Guatemala and California were preliminarily identified as Chrysoperla zastrowi based upon similarities in their vibrational courtship songs. This analysis aims to place six specimens, collected by collaborators in Guatemala, Armenia, Iran, and California, into a pre-existing phylogeny of the …

Review Of The Genus Babycurus Karsch, 1886 (Arachnida, Scorpiones, Buthidae), With Descriptions Of Barbaracurus Gen. N. And Two New Species From Oman And Yemen, František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

The genus Babycurus Karsch, 1886 sensu lato is split into two genera, a strictly African genus Babycurus, and the new genus Barbaracurus gen. n., which mainly includes species from the Horn of Africa and Arabian Peninsula. Two new species Barbaracurus winklerorum sp. n. from Oman and B. yemenensis sp. n. from Yemen are described, compared with other species, and fully illustrated with color photos of morphology, habitus, live specimens and collection localities. Males of Barbaracurus somalicus (Hirst, 1907) comb. n. and Barbaracurus zambonellii (Borelli, 1902) comb. n. are recorded for the first time and fully illustrated. Babycurus ornatus …

Eco-Evolutionary Implications Of Environmental Change Across Heterogeneous Landscapes, Jared J. Homola

Electronic Theses and Dissertations

Species use a variety of mechanisms to adapt to environmental change. These range from spatially tracking optimal environments, to phenotypically plastic responses and evolutionary adaptation. Due to increases in anthropogenic influence on environments, characteristics of change such as their duration and magnitude are undergoing fundamental shifts away from the natural disturbance regimes that shaped species’ evolution. This dissertation uses empirical data and simulation models to examine the ecological and evolutionary consequences of environmental change across real, heterogeneous landscapes for multiple species, with an emphasis on anthropogenic changes. I used landscape genetics to evaluate the effects of urbanization on two native …

Creating Tools To Determine Whether Katanin 60 Affects Female Rejection Of Males In Drosophila, Joshua R. Isaacson

Electronic Thesis and Dissertation Repository

During courtship, it is vital for organisms to recognize conspecifics because of the costs associated with forming interspecies hybrids. Many organisms use species-specific cues to recognize potential mates. These cues are perceived and evaluated via neural pathways. The genetic basis of how species-specific cues are evaluated and processed into receptive or rejection behaviour remains almost entirely unknown. The gene Katanin 60 (Kat60) has previously been identified as contributing to interspecific mate rejection between Drosophila melanogaster and D. simulans. I use the CRISPR/Cas9 system and RNA interference (RNAi) to confirm if Kat60 influences female receptivity between D. melanogaster …

The Costs Of A Big Brain: How Region Scaling And Energetic Costs Influence Brain Size Evolution In Weakly Electric African Fishes (Mormyridae), Kimberley Varunee Sukhum

Arts & Sciences Electronic Theses and Dissertations

Brains control an organismճ ability to sense, remember, and respond to the frequently changing world. Brains are composed of multiple regions and systems, which are associated with different processes. These regions are homologous across all vertebrates yet vary greatly in size and shape across clades. While regions can function independently, they also interact extensively. These characteristics make it difficult to predict whether regions can change in size independently from other regions in response to selection (mosaic evolution hypothesis), or whether the brain evolves as a single concerted organ (concerted evolution hypothesis). Further, many traits such as cognition, behavioral flexibility, and …

Models Of Conflict And Voluntary Cooperation Between Individuals In Non-Egalitarian Social Groups, Cody Koykka

Electronic Thesis and Dissertation Repository

This thesis broadly investigates the evolution of voluntary cooperative behaviour among individuals in conflict in non-egalitarian social groups. This work is partitioned into three sections. In the first section, we explore the emergence of non-egalitarian social groups to better understand the evolutionary incentives for voluntary participation in groups with unequal distributions of resources. In the second section, we study several scenarios in which genetically related individuals with unequal control over resources cooperate despite being in conflict. The evolution of parent-offspring conflict over provisioning, offspring signals, and alloparental care are each addressed in this section. In the last section, we investigate …

The Transcriptome Of The Bermuda Fireworm Odontosyllis Enopla (Annelida: Syllidae): A Unique Luciferase Gene Family And Putative Epitoky-Related Genes, Mercer R. Brugler, M. Teresa Aguado, Michael Tessler, Mark Siddall

Publications and Research

The Bermuda fireworm Odontosyllis enopla exhibits an extremely tight circalunar circadian behavior that results in an impressive bioluminescent mating swarm, thought to be due to a conventional luciferase-mediated oxidation of a light-emitting luciferin. In addition, the four eyes become hypertrophied and heavily pigmented, and the nephridial system is modified to store and release gametes and associated secretions. In an effort to elucidate transcripts related to bioluminescence, circadian or circalunar periodicity, as well as epitoky-related changes of the eyes and nephridial system, we examined the transcriptomic profile of three female O. enopladuring a bioluminescent swarm in Ferry Reach, Bermuda. …

Effects Of Life History And Brain Size On Cognition And Behavior: Studies On Prey-Searching In The Spider Pholcus Phalangioides, Joseph Kilmer

Theses and Dissertations

There is tremendous diversity in body size across animals, including many examples of derived miniaturization. A reduction in body size is accompanied by a reduction in brain size, which is predicted to lead to limitations in cognition, but we have yet to find empirical evidence indicating what these limitations might be. I used a behavioral assay common in web spiders to explore this topic. I observed spiders as they searched for prey that they recently captured and lost. This assay has the advantage of being easily quantifiable while reflecting a spider’s evaluation and memory of lost prey. I conducted a …

Genomic Signatures Of Adaptive Evolution, Jessica Weber

Biology ETDs

Comparative genomics has revolutionized virtually all fields of biology including the study of evolution. In this dissertation, I used next-generation sequencing to explore the evolutionary histories and adaptive evolution of a diverse set of taxa. Comparisons ranged across time scales, from population-level genetic diversity studies to questions spanning the deepest branches of the metazoan lineage. Whole genome sequencing of 50 unrelated Korean individuals revealed that Koreans have a distinct genetic history from the Chinese and Japanese populations. Our Korean-specific variome database was used to identify novel disease-causing variants in the Korean population, highlighting the value of high-quality ethnic variation databases …