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2013

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Articles 31 - 60 of 123

Full-Text Articles in Biology

A Holistic Approach For Selection Of Bacillus Spp. As A Bioremediator For Shrimp Postlarvae Culture, Thimmalapura Devaraja, Sanjoy Banerjee, Fatimah Yusoff, Mohamed Shariff, Helena Khatoon Jan 2013

A Holistic Approach For Selection Of Bacillus Spp. As A Bioremediator For Shrimp Postlarvae Culture, Thimmalapura Devaraja, Sanjoy Banerjee, Fatimah Yusoff, Mohamed Shariff, Helena Khatoon

Turkish Journal of Biology

Indigenous Bacillus pumilus, B. licheniformis, and B. subtilis were isolated from marine water and soil samples and investigated for potential bioremediation ability in Penaeus monodon culture. Bacillus spp. were selected based on their wide range of growth conditions, ease of mass culture, tolerance to total ammonia nitrogen (TAN), inhibition of pathogenic vibrios, nonpathogenicity, and ability to reduce TAN. Results showed that optimum growth of the selected Bacillus spp. occurred at 30 °C, pH 7.5, and 1.5% NaCl, and they secreted protease, amylase, and lipase. Vibrio spp. were also inhibited by 3 Bacillus spp. In addition, the selected Bacillus spp. had …

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First Records And Microgeographical Variations Of Culturable Heterotrophic Bacteria In An Inner Sea (The Sea Of Marmara) Between The Mediterranean And The Black Sea, Turkey, Gülşen Altuğ, Mi̇ne Çardak, Peli̇n Sali̇ha Çi̇ftçi̇, Sevan Gürün Jan 2013

First Records And Microgeographical Variations Of Culturable Heterotrophic Bacteria In An Inner Sea (The Sea Of Marmara) Between The Mediterranean And The Black Sea, Turkey, Gülşen Altuğ, Mi̇ne Çardak, Peli̇n Sali̇ha Çi̇ftçi̇, Sevan Gürün

Turkish Journal of Biology

The microdiversity and composition of culturable heterotrophic aerobic bacteria were investigated in seawater samples taken from the Sea of Marmara (an important basin between the Mediterranean and the Black Sea) in different time periods throughout 2002-2010. The bacterial isolates were identified with the automated microidentification system VITEK 2 Compact 30 (bioMerieux, France). The compositions of identified bacteria according to their exposure to environmental factors in the areas from which they were isolated were compared. The primary hydrographic parameters (temperature, salinity, and dissolved oxygen) were recorded at the sampling station. The highest heterotrophic aerobic bacteria abundance was found in the coastal …

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Bioaccumulation Of Tributyltin And Its Impact On Spermatogenesis In Mud Crab Scylla Serrata (Forskal), Revathi Peranandam, Iyapparaj Palanisamy, Munuswamy Natesan, Arockia Vasanthi Lourduraj, Krishnan Muthukalingan Jan 2013

Bioaccumulation Of Tributyltin And Its Impact On Spermatogenesis In Mud Crab Scylla Serrata (Forskal), Revathi Peranandam, Iyapparaj Palanisamy, Munuswamy Natesan, Arockia Vasanthi Lourduraj, Krishnan Muthukalingan

Turkish Journal of Biology

The effects of tributyltin (TBT) on the spermatogenesis of mud crab Scylla serrata were studied. TBT-exposed crabs exhibited a decrease in the gonadosomatic Index and the hepatosomatic Index compared to the crabs in the control group. Bioaccumulation of the TBT levels also varied in different tissues. The treated crabs showed variation in the weight of the testes with respect to TBT concentrations. Histological results clearly indicated that the control crabs showed spermatophores and granular substances were seen filling up the lumen of the seminiferous tubules. The testes of the experimental crabs illustrated that disruption in the seminiferous tubule membrane architecture, …

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Effect Of Exogenously Applied Salicylic Acid On Cadmium Chloride-Induced Oxidative Stress And Nitrogen Metabolism In Tomato (Lycopersicon Esculentum L.), Esra Koç, Ayşen Sülün Üstün, Nuri̇ Çeli̇k Jan 2013

Effect Of Exogenously Applied Salicylic Acid On Cadmium Chloride-Induced Oxidative Stress And Nitrogen Metabolism In Tomato (Lycopersicon Esculentum L.), Esra Koç, Ayşen Sülün Üstün, Nuri̇ Çeli̇k

Turkish Journal of Biology

Salicylic acid (SA) has a key role in the formation of induced systemic resistance and hypersensitive cells, but it has also been indicated to be effective in the formation of strong responses against abiotic stresses such as drought, cold, heavy metal toxicity, and osmotic stress. This study has demonstrated a connection between the total soluble protein and the nitrate reductase (NR) activity. In 20 \muM CdCl_2, 40 \muM CdCl_2 + 0.5 mM SA, and 100 \muM CdCl_2 + 0.5 mM SA treatments, on the 1st day following the treatment an increase was detected in the NR activity when compared to …

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Exploring The Sulfide Tolerance Of Ectosymbiotic Niphargus Amphipods From The Frasassi Caves, Central Italy, Jan Bauermeister, Karoline Assig, Sharmishtha Dattagupta Jan 2013

Exploring The Sulfide Tolerance Of Ectosymbiotic Niphargus Amphipods From The Frasassi Caves, Central Italy, Jan Bauermeister, Karoline Assig, Sharmishtha Dattagupta

International Journal of Speleology

Two species of the crustacean amphipod genus Niphargus inhabit the sulfidic groundwaters of the Frasassi caves in central Italy, and both harbor filamentous, sulfide-oxidizing Thiothrix ectosymbionts. As sulfide is toxic to most aerobic organisms, it appeared possible that the ectosymbionts could help their Niphargus hosts with detoxification processes. In this study, mortality due to sulfide was compared between Niphargus individuals with ectosymbionts and individuals whose ectosymbionts had been killed by antibiotic treatment. Both Frasassi-dwelling Niphargus species revealed exceptionally high tolerances to sulfide compared to other amphipod species studied so far. Niphargus individuals without viable ectosymbionts tolerated sulfide levels exceeding those …

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In The News, Joe N. Caudell Jan 2013

In The News, Joe N. Caudell

Human–Wildlife Interactions

No abstract provided.

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Fungi Isolated From Niedźwiedzia Cave In Kletno (Lower Silesia, Poland), Rafał Ogórek, Agnieszka Lejman, Krzysztof Matkowski Jan 2013

Fungi Isolated From Niedźwiedzia Cave In Kletno (Lower Silesia, Poland), Rafał Ogórek, Agnieszka Lejman, Krzysztof Matkowski

International Journal of Speleology

Niedźwiedzia Cave is the most beautiful cave in Poland, discovered in a block of Cambrian marbles. It is the most important part of the reserve established in 1977. The cave is located within the Kłodzko Valley, in Śnieżnik Mt. Massif, in Kleśnica Stream Valley and was discovered in 1966 while working in a quarry. The study aimed at first mycological evaluation of the air and the rocks in Niedźwiedzia Cave. Nine species of filamentous fungi and a yeast species were isolated from the air sampled in the cave, whereas from the rocks - nine species of filamentous fungi and two …

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Effect Of Nitrogen Supply On The C/N Balance In The Lichen Evernia Prunastri (L.) Ach., Silvana Munzi, Tommaso Pisani, Luca Paoli, Monia Renzi, Stefano Loppi Jan 2013

Effect Of Nitrogen Supply On The C/N Balance In The Lichen Evernia Prunastri (L.) Ach., Silvana Munzi, Tommaso Pisani, Luca Paoli, Monia Renzi, Stefano Loppi

Turkish Journal of Biology

This study investigated the relationship between nitrogen and carbon in the thalli of the lichen Evernia prunastri, with an emphasis on the role of the C/N balance in the response of this species to N excess. For this purpose, thalli collected at a remote site were sprayed for 5 weeks with NH_{4}NO_{3} (0.05 and 1 M) and (NH_{4})_{2}SO_4 (0.025 and 0.5 M) solutions, and later analyzed for their C and N content. The results showed that the total N content of thalli increased and the total C content decreased along with increasing N concentration in the treatment solutions. Consequently, the …

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Purification And Biochemical Characterization Of An Extracellular Lipase From Psychrotolerant Pseudomonas Fluorescens Ke38, Aysun Adan Gökbulut, Alper Arslanoğlu Jan 2013

Purification And Biochemical Characterization Of An Extracellular Lipase From Psychrotolerant Pseudomonas Fluorescens Ke38, Aysun Adan Gökbulut, Alper Arslanoğlu

Turkish Journal of Biology

An extracellular lipase producing bacterium was isolated from a soil sample, and identified as a strain of Pseudomonas fluorescens by 16S rRNA gene sequencing. It was named Pseudomonas fluorescens KE38. KE38 showed psychrotolerant properties with an optimum growth temperature of 25 °C. The lipase enzyme secreted by KE38 was purified 41.13-fold with an overall yield of 54.99%, and a specific activity of 337.3 U/mg. The molecular mass of purified lipase was estimated to be approximately 43 kDa by SDS-PAGE. Although the lipase was active at a temperature range of 15–65 °C, it exhibited maximum activity at 45 °C, at pH …

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Characterization, Antifungal Activity, And Cell Immobilization Of A Chitinase From Serratia Marcescens Mo-1, Sezer Okay, Murat Özdal, Esabi̇ Başaran Kurbanoğlu Jan 2013

Characterization, Antifungal Activity, And Cell Immobilization Of A Chitinase From Serratia Marcescens Mo-1, Sezer Okay, Murat Özdal, Esabi̇ Başaran Kurbanoğlu

Turkish Journal of Biology

Chitinases have the potential to control many pathogen species, such as fungi containing chitin on their cell walls. In the present study, chitinase from novel isolate Serratia marcescens MO-1, isolated from Poecilimon tauricola (Orthoptera: Tettigoniidae) in Turkey, was investigated. The optimum pH and temperature for the chitinase activity were found to be pH 7.0 (36.6 U/mL) and 50 °C (37.1 U/mL), respectively. Moreover, the activity was still high in acidic (23.0 U/mL at pH 3.0) and basic (17.3 U/mL at pH 11.0) conditions as well as at lower (29.5 U/mL at 20 °C) and higher (28.7 U/mL at 80 °C) …

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Optimization Of Immobilization Conditions By Conventional And Statistical Strategies For Alkaline Lipase Production By Pseudomonas Aeruginosa Mutant Cells: Scale-Up At Bench-Scale Bioreactor Level, Deepali Bisht, Santosh Kumar Yadav, Nandan Singh Darmwal Jan 2013

Optimization Of Immobilization Conditions By Conventional And Statistical Strategies For Alkaline Lipase Production By Pseudomonas Aeruginosa Mutant Cells: Scale-Up At Bench-Scale Bioreactor Level, Deepali Bisht, Santosh Kumar Yadav, Nandan Singh Darmwal

Turkish Journal of Biology

Suitability of 3 matrices, agarose, sodium alginate, and polyacrylamide, for immobilization of mutant cells of Pseudomonas aeruginosa MTCC 10,055 was investigated. Of these, agarose was proven to be the best as exhibiting maximum enzyme production (4363.4 U/mL), followed by polyacrylamide gel (2172.3 U/mL). Alginate beads were the poorest. The one-variable-at-a-time approach suggested agarose at 2.0%, immobilized bead at 4.0 g blocks/50 mL, and initial cell loading of 0.8 g in the matrix as optimum conditions for maximum lipase production (5982.3 U/mL) after 24 h of incubation. However, response surface methodology studies determined the optimum values of these variables as 1.96%, …

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Cytotoxic Activities Of Some Pseudomonas Aeruginosa Isolates: Possible Mechanisms And Approaches For Inhibition, Ghadir Saeed El-Housseiny, Mohammad Mabrouk Aboulwafa, Nadia Abdelhaleim Hassouna Jan 2013

Cytotoxic Activities Of Some Pseudomonas Aeruginosa Isolates: Possible Mechanisms And Approaches For Inhibition, Ghadir Saeed El-Housseiny, Mohammad Mabrouk Aboulwafa, Nadia Abdelhaleim Hassouna

Turkish Journal of Biology

The cytotoxicity of 6 highly cytotoxic Pseudomonas aeruginosa isolates was tested against Vero cells. Cytotoxicity was found to be cell-associated, high cytotoxicity was observed at a multiplicity of infection of 200:1, and this activity gradually decreased as the bacterial count decreased. This cytotoxicity caused rounding and detachment of the Vero monolayer as early as 1 h after infection. Moreover, viable metabolically active bacteria were necessary for Vero cell killing. These results imply that one or more of the type III secretion system effector proteins (ExoU, ExoS, ExoT, or ExoY) were responsible for the observed cytotoxic effects. This cytotoxicity was affected …

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Toxicities Of Diuron And Irgarol On The Hatchability And Early Stage Development Of Artemia Salina, Hakan Alyürük, Levent Çavaş Jan 2013

Toxicities Of Diuron And Irgarol On The Hatchability And Early Stage Development Of Artemia Salina, Hakan Alyürük, Levent Çavaş

Turkish Journal of Biology

Booster biocides are widely used in antifouling paints as bioactive agents against fouling organisms. In previously published reports, acute toxicity tests on Artemia salina (Linnaeus, 1758) were only focused on a part of the life cycle of the organism. The aim of this study was to investigate the toxicities of diuron and irgarol on the hatching stage of A. salina. According to the results, diuron significantly decreased the hatching percentage of A. salina cysts and prevented the hatching of larvae. The EC_{50} value for diuron was found as 12.01 mg/L. On the other hand, irgarol had no effect on the …

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Effect Of Asiatic And Ursolic Acids On Growth And Virulence Factors Of Uropathogenic Escherichia Coli Strains, Dorota Wojnicz, Dorota Tichaczek-Goska, Marta Kicia Jan 2013

Effect Of Asiatic And Ursolic Acids On Growth And Virulence Factors Of Uropathogenic Escherichia Coli Strains, Dorota Wojnicz, Dorota Tichaczek-Goska, Marta Kicia

Turkish Journal of Biology

This work was aimed at determining the possible antimicrobial potential of asiatic acid (AA) and ursolic acid (UA) against clinical uropathogenic Escherichia coli strains (UPECs). Phylogenetic affiliations of UPECs and virulence-associated gene carriage have been identified. PCR analysis revealed that the studied E. coli strains belong to phylogenetic group B2. All bacterial isolates were grouped into 4 pathotypes. The following were determined: the minimum inhibitory concentrations (MICs) according to CLSI; P-fimbriae synthesis, based on erythrocyte agglutination; curli fibers, by using YESCA agar with congo red; swimming motility, in motility agar; and alpha-hemolysin, on sheep’s-blood agar plates. The differences in antigrowth …

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Genotoxic And Safety Assessment Of 2 Parabens In Somatic Cells Of In Vivo Drosophila Melanogaster, Ari̇f Ayar, Handan Uysal Jan 2013

Genotoxic And Safety Assessment Of 2 Parabens In Somatic Cells Of In Vivo Drosophila Melanogaster, Ari̇f Ayar, Handan Uysal

Turkish Journal of Biology

The objective of this study was to determine the possible genotoxic effects of the para-hydroxybenzoic acid esters (parabens) of methylparaben, propylparaben, and the mixed paraben groups formed by a combination of these, which are used as preservative substances in the food, cosmetic, and drug industries, on Drosophila melanogaster using the wing somatic mutation and recombination test (SMART). According to the data obtained from microscopic analysis, no increase was determined in the single type clone number at various concentrations (100, 150, 200, and 250 mM) of paraben groups in comparison with the control group. In addition, increases corresponding to the concentration …

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Phospholipases C From Pseudomonas Aeruginosa And Bacillus Cereus Isolates, Chromosome-Mediated Enzymes With Roles In Virulence, Nooran Elleboudy, Mohammad Aboulwafa, Nadia Hassouna Jan 2013

Phospholipases C From Pseudomonas Aeruginosa And Bacillus Cereus Isolates, Chromosome-Mediated Enzymes With Roles In Virulence, Nooran Elleboudy, Mohammad Aboulwafa, Nadia Hassouna

Turkish Journal of Biology

Phospholipases C (PLCs) from Pseudomonas aeruginosa D183 and Bacillus cereus D101, 2 clinical isolates from 2 pus specimens, were partially purified by ammonium sulfate precipitation followed by dialysis and used to study the possible role of PLC in the virulence of the isolates. Partially purified PLC from both isolates induced lysis of Vero cells in the presence and absence of the producing bacterial cells. Noncytolytic dilutions of the partially purified PLC from Pseudomonas aeruginosa increased adherence of the producing cells to Vero cells but did not affect internalization. However, Bacillus cereus cells neither adhered to nor were internalized within the …

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Pomegranate (Punica Granatum L.) Reduces Endoplasmic Reticulum Stress Induced By Renal Ischemia/Reperfusion Injury In Rat, Khadijeh Hashemi, Kazem Parivar, Samira Fazlifar, Alireza Haghparast, Mehrdad Mohri, Naser Margan Azghadi, Mohammadhossein Nazem Shirazi, Amir Afkhami Goli Jan 2013

Pomegranate (Punica Granatum L.) Reduces Endoplasmic Reticulum Stress Induced By Renal Ischemia/Reperfusion Injury In Rat, Khadijeh Hashemi, Kazem Parivar, Samira Fazlifar, Alireza Haghparast, Mehrdad Mohri, Naser Margan Azghadi, Mohammadhossein Nazem Shirazi, Amir Afkhami Goli

Turkish Journal of Biology

Ischemia/reperfusion (I/R) is one of the main causes of acute renal failure, leading to generation of reactive oxygen species (ROS) and ensuing oxidative stress, which results in unfolded/misfolded protein accumulation and its dependent response pathways, generally known as unfolded protein response (UPR), in the endoplasmic reticulum (ER). We studied the effects of renal I/R on the expression of ER-stress genes, as well as concomitant effects of oral pretreatment with pomegranate (Punica granatum L.) pith and carpellary membrane (PPCM). An in vivo model of rat kidney I/R followed by conventional and real-time RT-PCR was used to evaluate the modulation of GRP78 …

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Production Of Herbicide-Resistant Cowpea (Vigna Unguiculata L.) Transformed With The Bar Gene, Muhammad Aasim, Khalid Mahmood Khawar, Sebahatti̇n Özcan Jan 2013

Production Of Herbicide-Resistant Cowpea (Vigna Unguiculata L.) Transformed With The Bar Gene, Muhammad Aasim, Khalid Mahmood Khawar, Sebahatti̇n Özcan

Turkish Journal of Biology

Plant genetic engineering has opened new avenues to modify crops and has provided a powerful tool for crop improvement. The present study reports the development of regeneration and genetic transformation protocol for the Turkish cowpea cultivar Akkiz. The immature cotyledons were cultured on Murashige and Skoog (MS) medium containing 0.25-0.75 mg L^{-1} 6-benzylaminopurine with or without 0.25 mg L^{-1} \alpha-naphthalene acetic acid. Shoot regeneration varied 44.4%-83.3% with 2.1-5.0 shoots per explant. Regenerated shoots were rooted in MS medium containing 0.50 mg L^{-1} indole-3-butyric acid and acclimatized in the greenhouse, where they flowered and set seeds. Immature cotyledons were transformed with …

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Effect Of Genotypical Factors On The Effectiveness Of Anther Culture In Eggplant (Solanum Melongena L.), Sevi̇nç Başay, Şeküre Şebnem Elli̇altioğlu Jan 2013

Effect Of Genotypical Factors On The Effectiveness Of Anther Culture In Eggplant (Solanum Melongena L.), Sevi̇nç Başay, Şeküre Şebnem Elli̇altioğlu

Turkish Journal of Biology

The aim of this study was to determine the androgenic capacity of some eggplant (Solanum melongena L.) varieties and breeding lines, and to establish the effectiveness of androgenesis induction in the less responsive genotypes by crossing with more responsive genotypes that have a high ability for haploid embryo formation. Flower buds containing greenish-yellow anthers were collected when the microspores were at the late uninucleate stage, which is equivalent to a bud size where petals are not visible. The anthers were kept in the dark at 35 °C for 8 days, then incubated with a 12 h light period at 25 …

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Production And Characterization Of Uricase From Streptomyces Exfoliatus Ur10 Isolated From Farm Wastes, Magda Aly, Sanaa Tork, Saleh Al-Garni, Reda Allam Jan 2013

Production And Characterization Of Uricase From Streptomyces Exfoliatus Ur10 Isolated From Farm Wastes, Magda Aly, Sanaa Tork, Saleh Al-Garni, Reda Allam

Turkish Journal of Biology

Uricase plays an important role in nitrogen metabolism and can be used medically as a diagnostic reagent. From soil, wastewater, and poultry waste samples collected in Jeddah, 49 bacterial isolates were obtained on either nutrient agar or starch nitrate agar. All the obtained isolates were screened on minimal medium containing 0.5% uric acid for uricase production. The most active bacterium (isolate UR10) produced about 0.5 U/mL of intracellular uricase and was identified as a species belonging to the genus Streptomyces using morphological, physiological, and biochemical characters. By 16S rDNA, it was identified as Streptomyces exfoliatus UR10. Maximum uricase production was …

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Hepatopancreas Mitochondria Of Mytilus Galloprovincialis: Effect Of Zinc Ions On Mitochondrial Bioenergetics And Metabolism, Antonino De Lisi, Ermelinda Prato, Francesca Biandolino, Giulio Sarli, Donatella Negro, Gianluigi La Piana, Domenico Marzulli Jan 2013

Hepatopancreas Mitochondria Of Mytilus Galloprovincialis: Effect Of Zinc Ions On Mitochondrial Bioenergetics And Metabolism, Antonino De Lisi, Ermelinda Prato, Francesca Biandolino, Giulio Sarli, Donatella Negro, Gianluigi La Piana, Domenico Marzulli

Turkish Journal of Biology

Oxygen uptake, respiratory complexes, and metabolic activities have been studied in mitochondria isolated from the hepatopancreata of Mytilus galloprovincialis collected in the “Mar Grande” of Taranto (Ionian Sea, Italy). Although exposure to 5.0 µg Zn^{2+}/L resulted in a significant increase of states 3 and 4 respiration with glutamate + pyruvate as respiratory substrate, it was found that the exposure of mussels to different concentrations of Zn^{2+} (2.5–7.5 µg/L) neither inhibited mitochondrial respiration nor exerted any inhibitory effect on representative mitochondrial dehydrogenases. It rather stimulates these activities, producing an extra synthesis of adenosine triphosphate by hepatopancreas mitochondria and possibly increasing its …

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A Comparative Study Of Egf Effects On In Vitro Bovine Embryo Development In Monoculture And Sequential Media, Azadeh Zahmatkesh, Mahmood Amiri Roudbar, Morteza Daliri Joupari Jan 2013

A Comparative Study Of Egf Effects On In Vitro Bovine Embryo Development In Monoculture And Sequential Media, Azadeh Zahmatkesh, Mahmood Amiri Roudbar, Morteza Daliri Joupari

Turkish Journal of Biology

Different culture system conditions can affect cleavage, zygote genome activation, embryo development, and viability. The purpose of the present study was to compare a monoculture synthetic oviductal fluid medium with modified sequential G1/G2 media and also to investigate the effect of epidermal growth factor (EGF) on bovine embryo development. Oocytes were aspirated from 2- to 6-mm ovarian follicles and matured in maturation media. After in vitro fertilization of matured oocytes, presumptive zygotes were cultured in test media with or without additional exogenous EGF. Results indicated that EGF significantly increased blastocyst formation but not cleavage rate in both media. There was …

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In Vitro Mutagenesis Of Etlingera Elatior (Jack) And Early Detection Of Mutation Using Rapd Markers, Muhamad Fahmi Yunus, Maheran Abd Aziz, Mihdzar Abdul Kadir, Siti Khalijah Daud, Azmi Abdul Rashid Jan 2013

In Vitro Mutagenesis Of Etlingera Elatior (Jack) And Early Detection Of Mutation Using Rapd Markers, Muhamad Fahmi Yunus, Maheran Abd Aziz, Mihdzar Abdul Kadir, Siti Khalijah Daud, Azmi Abdul Rashid

Turkish Journal of Biology

Mutation breeding techniques in combination with tissue culture and molecular marker methods provide a powerful tool for improvement of vegetatively propagated plants. The aim of this study was to develop a protocol for shoot regeneration and mutation induction of Etlingera elatior. The results of irradiation on in vitro buds of E. elatior showed LD_{50} to be 10 Gy, with the survival of explants being sharply reduced at this dosage. All 8 selected gamma irradiated regenerants were differentiated from the untreated control based on the banding patterns obtained using 9 primers, which generated 59 reproducible bands, whereby 35 (55.31%) were found …

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Improving In Vitro Leaf Disk Regeneration System Of Sugarcane (Saccharum Officinarum L.) With Concurrent Shoot/Root Induction From Somatic Embryos, Muhammad Nawaz, Ihsan Ullah, Naeem Iqbal, Muhammad Zaffar Iqbal, Muhammad Aslam Javed Jan 2013

Improving In Vitro Leaf Disk Regeneration System Of Sugarcane (Saccharum Officinarum L.) With Concurrent Shoot/Root Induction From Somatic Embryos, Muhammad Nawaz, Ihsan Ullah, Naeem Iqbal, Muhammad Zaffar Iqbal, Muhammad Aslam Javed

Turkish Journal of Biology

Genome engineering experiments are impeded by poor performance of regeneration systems. The present study was aimed at establishing a short and cost-effective in vitro regeneration system for elite sugarcane cultivars through simultaneous shoot/root induction. The innermost spindle leaf and shoot tip were used as explants. For callus induction, Murashige and Skoog (MS) medium supplemented with 2,4-dichlorophenoxyacetic acid (2,4-D) was used and 5.0 mg/L of 2,4-D supported maximum callus induction (84.5%). Three-week-old calli were treated with different levels of benzylaminopurine (BAP) ranging from 0.00 to 3.5 mg/L in MS medium, where 2.5 mg/L BAP was proven to be the best level …

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Evaluation Of Antioxidative Effects Of Twelve 3-Substituted-5,5-Diphenylhydantoins On Human Colon Cancer Cell Line Hct-116, Ana Obradovic, Jovana Zizic, Nemanja Trisovic, Bojan Bozic, Gordana Uscumlic, Biljana Bozic, Snezana Markovic Jan 2013

Evaluation Of Antioxidative Effects Of Twelve 3-Substituted-5,5-Diphenylhydantoins On Human Colon Cancer Cell Line Hct-116, Ana Obradovic, Jovana Zizic, Nemanja Trisovic, Bojan Bozic, Gordana Uscumlic, Biljana Bozic, Snezana Markovic

Turkish Journal of Biology

Antioxidant effects of twelve 3-substituted-5,5-diphenylhydantoins in concentrations of 0.01, 0.1, 1, 10, and 100 µM on human colon cancer cell line HCT-116 were determined 24 h after treatment. The concentrations of superoxide anion radical (O_{2}^{.}^{-}), nitrites (NO_{2}^{-}), and total glutathione were determined spectrophotometrically. Results indicated that treatment with all compounds induced a decrease in O_{2}^{.}^{-} and an increase in NO_{2}^- concentrations in HCT-116 cells. Treatment with all compounds resulted in an increase in glutathione, and this indicates changes in redox homeostasis. Based on the obtained results, the investigated hydantoins act as antioxidants because they decrease the production of superoxide anion …

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Compositional Studies And Antioxidant Potential Of Albizia Lebbeck (L.) Benth. Pods And Seeds, Muhammad Zia-Ul-Haq, Shakeel Ahmad, Mughal Qayum, Sezai̇ Erci̇şli̇ Jan 2013

Compositional Studies And Antioxidant Potential Of Albizia Lebbeck (L.) Benth. Pods And Seeds, Muhammad Zia-Ul-Haq, Shakeel Ahmad, Mughal Qayum, Sezai̇ Erci̇şli̇

Turkish Journal of Biology

Albizia lebbeck (L.) Benth. is an important medicinal tree found in Pakistan. The present study evaluates the composition and antioxidant potential of various parts of the A. lebbeck plant. Compositional studies indicated carbohydrates as major components while saponin was found as a major antinutrient in both pods and seeds. Potassium was found in the highest amount and copper in the lowest. The amino acid profile indicated that arginine and lysine are present in excessive amounts in seeds while glutamic acid and aspartic acid are present in the highest concentrations in pods. While the linoleic acid was detected as the major …

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Antimicrobial, Antioxidant, And Synergistic Properties Of Two Nutraceutical Plants: Terminalia Catappa L. And Colocasia Esculenta L., Sumitra Chanda, Kalpna Rakholiya, Komal Dholakia, Yogesh Baravalia Jan 2013

Antimicrobial, Antioxidant, And Synergistic Properties Of Two Nutraceutical Plants: Terminalia Catappa L. And Colocasia Esculenta L., Sumitra Chanda, Kalpna Rakholiya, Komal Dholakia, Yogesh Baravalia

Turkish Journal of Biology

Antibiotics have been effective in treating infectious diseases, but resistance to these drugs has led to the emergence of new and reemergence of old infectious diseases. Using a combination of plant extracts and antibiotics is one way of combating these multidrug-resistant microorganisms. The aim of this investigation was to evaluate the antimicrobial and antioxidant properties of 2 nutraceutical plants: Terminalia catappa and Colocasia esculenta. The antimicrobial activity of the plants was evaluated against 25 microorganisms by agar well diffusion method. C. esculenta did not show any antimicrobial activity against bacteria and fungi. Therefore, only methanol extract of T. catappa was …

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Pcr Screening For The Surfactin (Sfp) Gene In Marine Bacillus Strains And Its Molecular Characterization From Bacillus Tequilensis Nios11, Seema Porob, Sagar Nayak, Areena Fernandes, Priyanka Padmanabhan, Balkrishna Arjun Patil, Ram Murti Meena, Nagappa Ramaiah Jan 2013

Pcr Screening For The Surfactin (Sfp) Gene In Marine Bacillus Strains And Its Molecular Characterization From Bacillus Tequilensis Nios11, Seema Porob, Sagar Nayak, Areena Fernandes, Priyanka Padmanabhan, Balkrishna Arjun Patil, Ram Murti Meena, Nagappa Ramaiah

Turkish Journal of Biology

The sfp gene responsible for surfactin production was screened from the DNA extracts of 37 Bacillus spp. whose identity was confirmed by 16S rRNA gene sequence analyses. PCR screening revealed amplification of sfp gene fragments in a total of 25 isolates. Several isolates belonging to Bacillus tequilensis were found to be positive for this gene. A gene fragment coding for the sfp gene was amplified and cloned from genomic DNA of the isolate B. tequilensis NIOS11. The cloned gene has an open reading frame of 675 bp coding for 224 amino acids with a theoretical molecular weight of 26,166.33 Da …

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Molecular Characterization Of Yarrowia Lipolytica Strains Isolated From Different Environments And Lipase Profiling, Onur Akpinar, Füsun Bahri̇ye Uçar Jan 2013

Molecular Characterization Of Yarrowia Lipolytica Strains Isolated From Different Environments And Lipase Profiling, Onur Akpinar, Füsun Bahri̇ye Uçar

Turkish Journal of Biology

In order to analyze yeasts that produce industrial compounds, it is essential to identify them accurately. Yarrowia lipolytica is one of the most extensively studied 'nonconventional' yeasts, being a strictly aerobic microorganism capable of producing important metabolites and having an intense secretory activity, which justifies efforts to use it in industry (as a biocatalyst), in molecular biology, and in studies of genetics. Therefore, in this study, an accurate identification of Y. lipolytica strains was performed using 3 different molecular biological methods (RFLP analysis of ITS1-5.8S rDNA-ITS2 and 18S rDNA regions and sequencing of the D1/D2 domain of the 26S rDNA …

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Biopolymer Generation From Sweet Sorghum Juice: Screening, Isolation, Identification, And Fermentative Polyhydroxyalkanoate Production By Bacillus Aryabhattai, Varavut Tanamool, Tsuyoshi Imai, Paiboon Danvirutai, Pakawadee Kaewkannetra Jan 2013

Biopolymer Generation From Sweet Sorghum Juice: Screening, Isolation, Identification, And Fermentative Polyhydroxyalkanoate Production By Bacillus Aryabhattai, Varavut Tanamool, Tsuyoshi Imai, Paiboon Danvirutai, Pakawadee Kaewkannetra

Turkish Journal of Biology

This study aims to use sweet sorghum juice (SSJ) to produce an environmentally friendly biopolymer of polyhydroxyalkanoates (PHAs) by bacteria isolated from soil. Among 18 isolates, only 3 isolates, coded as S4, S6, and S11, were chosen to produce PHA via batch fermentation compared to 3 strains of Alcaligenes eutrophus, A. latus, and Hydrogenophaga sp., respectively, under controlled conditions at pH 7, 35 °C, and 20 g/L of initial total sugar in the SSJ. The results clearly showed that the isolate S4 can produce maximum PHAs of 1.74 g/L with 57.62% dry cell weight and yield maximum hourly productivity at …

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