Biology Commons^™

Amid The Vipers: Establishing Malware's Position Within The Information Ecosystem, Shawn Louis Everett Robertson

Computer Science and Software Engineering

The paper consists of a detailed examination of malware broken down into three main sections.

1. Introduction: Malware in the World Today. Begins with a definition of terms, examination of the types of malware, research into historical pieces of malicious code, a detailed analysis of the attackers, why malware is so prevalent, and why it is so hard to defend against. This section finishes with a comparison of reasons to create and not to create malware.
2. Background: "Good" Pieces of Malware. Examination of what makes malware effective. Analysis of the existing CVSS standard and proposal of the alternative VIPERS classification system. …

Polycationic Glycosides, Robert Engel, Ishrat Ghani, Diego Montenegro, Marie Thomas, Barbara Klaritch-Vrana, Alejandra Castaño, Laura Friedman, Jay Leb, Leah Rothman, Heidi Lee, Craig Capodiferro, Daniel Ambinder, Eve Cere, Christopher Awad, Faiza Sheikh, Jaimelee Rizzo, Lisa-Marie Nisbett, Erika Testani, Karin Melkonian

Publications and Research

Cationic lipids have long been known to serve as antibacterial and antifungal agents. Prior efforts with attachment of cationic lipids to carbohydrate-based surfaces have suggested the possibility that carbohydrate-attached cationic lipids might serve as antibacterial and antifungal pharmaceutical agents. Toward the understanding of this possibility, we have synthesized several series of cationic lipids attached to a variety of glycosides with the intent of generating antimicrobial agents that would meet the requirement for serving as a pharmaceutical agent, specifically that the agent be effective at a very low concentration as well as being biodegradable within the organism being treated. The initial …

Reciprocal Regulation Of Trek-1 Channels By Arachidonic Acid And Crh In Mouse Corticotropes, Andy K. Lee, James L. Smart, Marcelo Rubinstein, Malcolm J. Low, Amy Tse

Faculty Publications - Department of Biological & Molecular Science

Arachidonic acid (AA) is generated in the anterior pituitary gland upon stimulation by the ACTH secretagogue, CRH. Using the patch clamp technique,we examined the action of AA on the excitability of single pituitary corticotropes obtained from a transgenic mouse strain that expresses the enhanced green fluorescent protein driven by the proopiomelanocortin promoter. CRH evoked depolarization, but AA caused hyperpolarization. Under voltage clamp condition, AA caused a rapid inhibition of the delayed rectifier K current and then increased a background K current. Inhibition of AA metabolism did not prevent the activation of the K current by AA, suggesting a direct action …

A Report Of The Effects Of Fishing Advisory Group (Efag) Meeting (2 – 3 November 2010) And The Western Rock Lobster Ecological Effects Of Fishing Research Plan Revised And Updated By The Effects Of Fishing Advisory Group (2 – 3 November 2010), Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

110 Years Of Avipoxvirus In The Galapagos Islands, Patricia Parker, Elizabeth Buckles, Heather Farrington, Kenneth Petren, Noah Whiteman, Robert Ricklefs, Jennifer Bollmer, Gustavo Jiménez-Uzcátegui

Biology Department Faculty Works

The role of disease in regulating populations is controversial, partly owing to the absence of good disease records in historic wildlife populations. We examined birds collected in the Galapagos Islands between 1891 and 1906 that are currently held at the California Academy of Sciences and the Zoologisches Staatssammlung Muenchen, including 3973 specimens representing species from two well-studied families of endemic passerine birds: finches and mockingbirds. Beginning with samples collected in 1899, we observed cutaneous lesions consistent with Avipoxvirus on 226 (6.3%) specimens. Histopathology and viral genotyping of 59 candidate tissue samples from six islands showed that 21 (35.6%) were positive …

Temperature Increase Effects On Sagebrush Ecosystem Forbs: Exprimental Evidence And Range Manager Perspectives, Hilary Louise Whitcomb

Green Canyon Environmental Research Area, Logan Utah

No abstract provided.

Effect Of Substrate Composition And Alignment On Corneal Cell Phenotype, Donna Phu '09, Lindsay S. Wray '08, Robert V. Warren '10, Richard C. Haskell, Elizabeth J. Orwin

All HMC Faculty Publications and Research

Corneal blindness is a significant problem treated primarily by corneal transplants. Donor tissue supply is low, creating a growing need for an alternative. A tissue-engineered cornea made from patient-derived cells and biopolymer scaffold materials would be widely accessible to all patients and would alleviate the need for donor sources. Previous work in this lab led to a method for electrospinning type I collagen scaffolds for culturing corneal fibroblasts ex vivo that mimics the microenvironment in the native cornea. This electrospun scaffold is composed of small-diameter, aligned collagen fibers. In this study, we investigate the effect of scaffold nanostructure and composition …

Subaerial Freshwater Stromatolites In Deer Cave, Sarawak – A Unique Geobiological Cave Formation, Joyce Lundberg, Donald A. Mcfarlane

WM Keck Science Faculty Papers

A suite of distinctive freshwater subaerial phosphatic stromatolites is developed close to the northeastern entrance of Deer Cave, Gunung Mulu National Park, Sarawak, Borneo, in conditions of very low light but ample supply of nutrients from guano. These stromatolites are not particulate; they are composed of alternating layers of more porous and more dense amorphous hydroxylapatite. This biomineralization occurs as moulds of coccoid (the majority) and filamentous (less abundant) cyanobacteria. Mineralization occurs at a pH of ~ 7.0 in the extracellular sheaths and in micro-domains of varying carbonate content in the surrounding mucus of the biofilm. The most recent surfaces …

Epoxi: Comet 103p/Hartley 2 Observations From A Worldwide Campaign ; Astrophysical Journal Letters, K. Meech, M. A'Hearn, J. Adams, P. Bacci, J. Bai, L. Barrera, M. Battelino, J. Bauer, E. Becklin, B. Bhatt, N. Biver, D. Bockelee-Morvan, D. Bodewits, H. Bohnhardt, J. Boissier, B. Bonev, W. Borghini, J. Brucato, E. Bryssinck, M. Buie, H. Canovas, D. Castellano, S. Charnley, W. Chen, P. Chiang, Y. Choi, D. Christian, Y. Chuang, Anita Cochran, P. Colom, M. Combi, I. Coulson, J. Crovisier, N. Russo, K. Dennerl, K. Dewahl, M. Disanti, M. Facchini, T. Farnham, Y. Fernandez, H. Floren, U. Frisk, T. Fujiyoshi, R. Furusho, T. Fuse, G. Galli, D. Garcia-Hernandez, A. Gersch, Z. Getu

Physics Faculty Works

Earth- and space-based observations provide synergistic information for space mission encounters by providing data over longer timescales, at different wavelengths and using techniques that are impossible with an in situ flyby. We report here such observations in support of the EPOXI spacecraft flyby of comet 103P/Hartley 2. The nucleus is small and dark, and exhibited a very rapidly changing rotation period. Prior to the onset of activity, the period was ~16.4 hr. Starting in 2010 August the period changed from 16.6 hr to near 19 hr in December. With respect to dust composition, most volatiles and carbon and nitrogen isotope …

Establishing An Interdepartmental Fluorescent Microscopy Facility, Marcy Kelly, David Zuzga, Nigel Yarlett

Cornerstone 3 Reports : Interdisciplinary Informatics

No abstract provided.

Summer 2011, Nova Southeastern University

Currents

No abstract provided.

Mojave Applied Ecology Notes Winter 2011, Scott R. Abella, Alice C. Newton, Kenneth Chittick, Pam Sinanian

Mojave Applied Ecology Notes

Lake Mead’s collaborative applied science research program; “annoying the elephant” - ruminations on active management by Alice Newton, Lake Mead NRA vegetation manager; 2012 NWRA Lake Mead symposium sneak peak; assessing forest change using dendrochronology in the Spring Mountains.

Analysis Of Biological Features Associated With Meiotic Recombination Hot And Cold Spots In Saccharomyces Cerevisiae, Loren Hansen, Nak-Kyeong Kim, Leonardo Mariño-Ramírez, David Landsman

Mathematics & Statistics Faculty Publications

Meiotic recombination is not distributed uniformly throughout the genome. There are regions of high and low recombination rates called hot and cold spots, respectively. The recombination rate parallels the frequency of DNA double-strand breaks (DSBs) that initiate meiotic recombination. The aim is to identify biological features associated with DSB frequency. We constructed vectors representing various chromatin and sequence-based features for 1179 DSB hot spots and 1028 DSB cold spots. Using a feature selection approach, we have identified five features that distinguish hot from cold spots in Saccharomyces cerevisiae with high accuracy, namely the histone marks H3K4me3, H3K14ac, H3K36me3, and H3K79me3; …

A Survey Of The Chemical Content And Medicinal Activity Of Shrub-Steppe Plants Of The Pacific Northwest, Aaron M. John

Undergraduate Honors Theses

A need for new modes of antibiotic therapy has resulted from the increasing incidence of bacterial resistance to drugs. One approach to this problem involves the search for plant compounds that may help to overcome multi-drug resistance. Many plant genera have been utilized in Native American traditional medicine for their beneficial properties. Such plants include the shrub-steppe genera, Eriogonun and Collomia, which have been used as cold remedies, pain relievers, and for antibiotic-related uses. Limited chemical studies of these genera have revealed medicinally useful compounds such as flavonoids and terpenoids, and further research may result in the identification of …

Investigating The Effects Of The Plasticizers Bisphenol A And Di (2-Ethylhexyl) Phthalate On Dopaminergic Neurons In A C. Elegans Parkinson's Disease, Amanda Valera

Undergraduate Honors Theses

Parkinson's disease (PD) is a neurodegenerative disorder characterized by loss of dopamine (DA) containing neurons in the substantia nigra of the brain. Though the cellular pathways that lead to PD are varied and not well understood, elevated levels of reactive oxygen species (ROS) and inhibition of the mitochondrial electron transport chain enzyme complex I have been associated with PD pathogenesis. Environmental factors such as the plasticizers bisphenol A (BPA) and di(2-ethylhexyl) phthalate (DEHP) may also be involved in PD pathogenesis. In this research, three strains of the nematode Caenorhabditis elegans (C. elegans), a wild-type N2 strain, a ROS-sensitive nnt …

The Ecology Of Disturbances And Global Change In The Montane Grasslands Of The Nilgiris, South India, Madhusudan P. Srinivasan

University of Kentucky Doctoral Dissertations

Biodiversity rich regions worldwide face threats from various global change agents. This research quantifies environmental influences on vegetation, and the impacts of exotic woody plant invasion and anthropogenic nitrogen (N) deposition in a global biodiversity hotspot. The study was conducted in the montane grasslands of the Nilgiris, Western Ghats, and outlines potential management options for this region. Specifically, I examined (1) the role of environmental factors in influencing native plant distribution and ecosystem properties, (2) the status and impact of exotic shrub (Scotch broom, henceforth broom) invasion, (3) the role of disturbances in the success of broom, (4) the role …

Mechanisms Of Adsorption Of Copper And Silver Ions On Carbon Materials In An Open Circuit, Mikhail M. Goldin

Faculty Publications and Presentations

No abstract provided.

Effective Numbers Of Electrons As A Criterion Of Carbon Suitability As A Hemosorbent, Mogely Khubutiya, Boris Grafov, Mikhail M. Goldin, Alexei Davydov, Vladimir Kolesnikov, Mark Goldin

Faculty Publications and Presentations

The number of medical applications of electrochemistry has grown in recent years due to the increased applications of electrochemical concepts to various systems of the organism. This includes electrochemically controlled hemosorption detoxification, where the removal of toxicants is controlled by changing the potential of the hemosorbent. It is important to avoid Faradaic processes in the course of hemosorption, which can lead to the addition of electrochemically modified toxicants to blood. The probability of their occurrence should depend on the open-circuit potential of the activated carbon. In order to elucidate the identification of Faradaic reactions, a model system was investigated. The …

Biogeographic Consequences Of Historic And Contemporary Climate Change In Boreal Forest Birds, Joel Ralston

Legacy Theses & Dissertations (2009 - 2024)

In this dissertation, I combine ecological niche models (ENMs), which can be extrapolated through time to predict historic and future changes in species distributions, with mitochondrial and nuclear genetic markers to study the biogeographic consequences of historic and contemporary climate change on boreal forest birds, and in particular Blackpoll Warbler.

Mutation Of The Hof1 Pest Domain Affects Cytokinesis In Budding Yeast, Katherine E. Stockstill

Masters Theses

"Cytokinesis is the division of a cell into two daughter cells. Cytokinesis failure results in polyploidy, which may contribute to tumorigenesis or cause cell death. The Saccharomyces cerevisiae protein Hof1, which is required for efficient cytokinesis, is phosphorylated during mitosis. The hypothesis that MEN (mitotic exit network) dependent phosphorylation regulates Hof1 degradation, triggering completion of cytokinesis was tested. Hof1 contains a PEST sequence, which is rich in proline, glutamic acid, serine, and threonine, and is believed to be involved in protein degradation. To test the hypothesis, we created two non-phosphorylatable mutants of the Hof1 PEST domain tagged with GFP. The …

Putting The X In Biology: A Review Of The Mathematics Of Life, John Adam

Mathematics & Statistics Faculty Publications

(First Paragraph) Charles Darwin's 1859 work On the Origin of the Species contained no equations. But that does not mean mathematics has no role to play in the science of life; in fact, the field of biomathematics is burgeoning and has been for several decades. Ian Stewart's new book does an admirable job of unfolding the mathematics undergirding so much of the research being carried out today in the many fields that comprise the subject of biology. Stewart sets the context by noting five great revolutions that have changed the way scientists think about life. These five revolutions are: (i) …

Settlement And Growth Of Quagga Mussels (Dreissenia Rostriformis Bugensis Andrusov, 1897) In Lake Mead, Nevada-Arizona, Usa, Wai Hing Wong, Shawn Gerstenberger, Wen Baldwin, Bryan Moore

Environmental & Global Health Faculty Research

Settlement and growth of quagga mussels Dreissena rostriformis bugensis were monitored in Lake Mead, NV, USA, where the first dreissenid occurrence was confirmed in the western United States. To measure the settlement rate of these invasive mussels, seven acrylonitrile butadiene styrene (ABS) pipes were attached to a line in shallow water (7.7 m below the surface) since November 23, 2007; eight ABS pipes were placed on another line in deep water (13.4 m below the surface) since January 3, 2008. Quagga mussels were sampled from these pipes on March 19, May 21, July 9, October 20, and December 19, 2008. …

Table Of Contents

Journal of the South Carolina Academy of Science

No abstract provided.

President's Message, Justin K. Wyatt

Journal of the South Carolina Academy of Science

No abstract provided.

Scas Officers And Council Members 2010 - 2011

Journal of the South Carolina Academy of Science

No abstract provided.

Properties And Uses Of Sodium Titanates And Peroxotitanates, David Hobbs

Journal of the South Carolina Academy of Science

No abstract provided.

Scas Officers And Council Members 2010-2011

Journal of the South Carolina Academy of Science

No abstract provided.

Physiological Markers Of Activity-Based Anorexia In Sprague Dawley Rats, Crystal Lange, Michelle Vieyra

Journal of the South Carolina Academy of Science

No abstract provided.

Inverse Correspondence Of Amh And Fsh Levels In Women Presenting For Infertility Treatments, Amara Iverson, Abdelmonium Younis, William Butler, William Roudebush

Journal of the South Carolina Academy of Science

No abstract provided.

Determining A Patient Recovery From A Total Knee Replacement Using Fuzzy Logic And Active Databases, Robert Azarbod

All Graduate Theses, Dissertations, and Other Capstone Projects

The purpose of the knowledge-based system is to predict the rehabilitation timeline of a patient in physical therapy for a total knee replacement. All patients have various attributes that contribute to their rehabilitation rate such as: weight, gender, smoking habit, medications, physical ability, or other medical problems. A combination of any one or several of these attributes will affect the recovery process. The proposed FRTP (Fuzzy Rehabilitation Timeline Predictor) is a fuzzy data mining model that can predict the recovery length of a patient in physical therapy for a total knee replacement and provide feedback to experts for revision of …