Dairy Science Commons^™

Comparative Study Of Single Imputation Techniques For The Prediction Of Missing Dairy Data, Ahmed M. Gad Prof, Ahmed Abdelhakim Ahmed Mr, Eman Manaa Prof, Basant Shafik Dr, Sakr Mostafa Prof

Business Administration

Dairy farm records are a crucial component of effective livestock business management. Record analysis allows a farm’s owner to make informed decisions. Incomplete records are less useful for data analysis, so it's important to handle missing values correctly. This study compares different imputation methods for handling missing values in a dataset of dairy records comprising 997 records collected from 234 cows between 2012 and 2022. The dataset was screened against records with missing values and then deleted, resulting in 858 observations from 200 animals. There were missing values in two variables, with a missing percentage of 13.9%: days in milk …

Pasture Data Reconciliation Of The South West Agricultural Zone Of Western Australia September 2024, Tafesse Estifanos, Amir Abadi Ghadim, Paul Mattingley, Kate Pritchett, Tony Della Bosca

Animal production and livestock published reports

Western Australia’s (WA) agricultural land use system features extensive pasture land vital for grazing sheep and cattle. Most pastures in the south west of Western Australia consist of annual species that grow during the cool, wet winters of the Mediterranean climate and senesce in the warm to hot, dry summers. Understanding the spatial distribution of pasture areas within the context of mixed farming is essential for developing effective land management strategies to enhance livestock production and profitability through balanced pasture supply and demand.

This report focuses on reconciling pasture area data for the south-west of Western Australia’s agricultural zone across …

Photobiomodulation Of Bovine Oocytes During Maturation Increases Atp Content And Enhances Subsequent Embryonic Development, Kendall Richey

All Theses

Bovine in-vitro production(IVP) of embryos is a growing field for producing offspring with desirable genetics in the cattle industries. While IVP is effective, oocyte cytoplasmic maturation is compromised, and bovine oocytes matured in-vitro have reduced metabolic activity than those matured in-vivo. Mitochondria are the central unit of oocyte metabolism, producing ATP through OXPHOS. Photobiomodulation is a light treatment reported to improve metabolic activity. In five experiments, we measured the effects of photobiomodulation treatment with red LED at 16-(L-16) and 20 h(L-20) of bovine oocyte in-vitro maturation on subsequent embryonic development, mitochondrial activity and nuclear progression. Bovine COCs were aspirated …

A Computerized Mastitis Classification Aid Using A Dairy Herd-Based Records: Multi-Layer Perceptron (Mlp) Neural Network With Backpropagation Approach, Ahmed M. Gad Prof, Dina Faris De, Sherif Ramadan Prof, Ghada Afifi Dr, Eman Manaa Prof, Mahmoud El-Tarabany Prof

Business Administration

The main objective of this study is to develop an efficient machine learning-based model for the early prediction of clinical mastitis in Holstein Friesian dairy cattle where automatic milking system (AMS) data is used. The model aims to offer a costless opportunity for mastitis control and reduce its negative impact on livestock production. Different forward multilayer perceptron (MLP) neural networks with backpropagation (BP) learning algorithms using various numbers of hidden neurons and epochs have been introduced. The results of the established models are evaluated based on different metrics such as the accuracy, the F1 core, the precision, the recall, and …

Liquid Chromatography Mass Spectrometry Method Development For The Determination Of Β–Defensins In Bovine Milk, Elisha Ogbebor

Masters Theses & Specialist Projects

Bovine mastitis is caused by a wide range of pathogens which results in a substantial economic loss for the dairy cattle livestock industry. β-defensins are a part of the innate immune system and act as the first line of defense against mastitis in bovine. β-defensins (~6- 10kDa) are antimicrobial peptides that contain about 28 to 67 amino acids, the presence of six cysteine residues results in their three disulfide bonds and a β-sheet structure. A few β- defensins have been identified in cows based on the site of occurrence and time of expression in tissue, but not in milk. A …

Towards The Quantification Of Estrone And 17Β-Estradiol Conjugates In Dairy Cattle Urine Sorptive Stir Bar Extraction And Gas Chromatography-Mass Spectometry, S.M. Istiak Ahmed

Masters Theses & Specialist Projects

The global concern regarding the presence of compounds with estrogenic properties in the environment has grown significantly. Endocrine-disrupting compounds (EDCs) are environmental pollutants that disrupt the endocrine systems of both wildlife and humans. Estrogens, with their potent estrogenic effects, are particularly noteworthy among the various substances with endocrine-disrupting properties. They are of concern due to their prevalence in the environment, especially due to dairy waste contamination. These lipophilic compounds can accumulate in livestock fat tissues, potentially entering the human food chain. Sulfated forms of estrone and β- estriol, which exhibit a higher degree of saturation than their non-conjugated counterparts, have …

The Evaluation Of Feed Additives On Reducing Enteric Methane Production From Cattle, Reba L. Colin

Department of Animal Science: Dissertations, Theses, and Student Research

Environmental sustainability can be positively impacted by the inclusion of feed additives to reduce enteric methane production from cattle. Methane production can be affected by feed additives that either alter the rumen environment or act as methanogenesis inhibitors. A reduction in methane from cattle can contribute to meeting carbon neutrality.

A metabolism study was conducted to evaluate Alga 1.0, a product containing bromoform, fed to cattle to evaluate the effects on gas emissions. Treatments were (0, 69, or 103 g/d Alga 1.0) fed in a corn-based diet. Headbox-style indirect calorimeters were used to measure gas emissions. Feeding Alga 1.0 linearly …

Dairy & Development: An Investigation Into The Economic And Sociopolitical Dynamics Of Yak Cheesemaking In Nepal, Audrey Peiker

Independent Study Project (ISP) Collection

Cheesemaking in Nepal is full of love, passion, and creativity. What began as a Swiss development project in the 1950s has now grown into a full-fledged industry, providing jobs, creative outlets, and cultural expression for many. Nepal’s Dairy Development Corporation owns several factories throughout the country, setting the tone for the industry by establishing the standard price for milk and process for cheesemaking. From there, privately held factories innovate and compete, bringing new products to the market and increasing wages, but also struggle with consistency and reliability. Now, Nepal’s cheesemaking market is at a turning point—much of the herding population …

Liquid Chromatography With Tandem Mass Spectrometry Method Development For The Determination Of Β–Defensins In Bovine Milk, Symone T. Whalin

Masters Theses & Specialist Projects

Bovine mastitis, caused by a wide array of pathogens, results in a substantial economic loss for the dairy cattle livestock industry. β-defensins are a part of the bovine’s innate immune system and act as the first line of defense against mastitis. Only foundational research has been done on β-defensins’ ability to treat and prevent mastitis. There have been no analytical methods reported in the literature for analyzing β-defensins in bovine milk. This research aims to create an analytical approach to determine β-defensins in bovine milk. It is challenging to determine an analyte in a complex sample matrix, and milk is …

Primary Industries Development Research Highlights 2021, Department Of Primary Industries And Regional Development, Tim Scanlon

Books & book chapters

The Primary Industries Development Research Highlights 2021 showcases the breadth and depth of the Department of Primary Industries and Regional Development’s research and development activities over the past several years.

Stories featured in Research Highlights 2021 stem from about 60 (of 140) current and recently-completed projects undertaken by the Department of Primary Industries and Regional Development’s (DPIRD) 1100 scientists, technical experts and economists throughout the State.

Explore our Research Highlights 2021.

The publication demonstrates the innovative and applicable research that DPIRD and its collaborators and investment partners deliver to Western Australia.

Download the Research Highlights 2021 here. Alternatively, …

Industry Funding Scheme Regulations: A Review Of Operation And Effectiveness, May 2021, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity published reports

Section 147 of the Biosecurity and Agriculture Management Act 2007 requires the Minister for Agriculture and Food to carry out a review of the operation and effectiveness of any regulations made for the purposes of establishing an Industry Funding Scheme (IFS) every five years.

In 2010, regulations establishing three IFSs commenced to address pest and disease threats relevant to Western Australia’s broadacre and pastoral cropping and livestock sectors. This report documents the second fifth-year anniversary statutory review of the following regulations:

• Biosecurity and Agriculture Management Industry Funding Scheme (Cattle) Regulations 2010

• Biosecurity and Agriculture Management Industry Funding Scheme …

A Survey Of Dairy-Goat Keeping In Zanzibar, Tiffanie Stone, Charles A. Francis, L. O. Eik

Department of Agronomy and Horticulture: Faculty Publications

Dairy goats with improved genetics for milk production were recently introduced onto small-scale farms in Zanzibar through governmental and non-governmental projects. These projects were meant to support small-scale farmers by improving both income and household nutrition through milk production. No follow up had been conducted to understand what effects dairy goat keeping had on these small-scale farms, or how they could be improved. A survey of 193 dairy goat farmers in Zanzibar was conducted, including 30% and 60% of all dairy goat farmers on Unguja and Pemba, the two largest islands, respectively. The objective was to understand the impact keeping …

Genetic Variation Of The Dgat1 Gene In Dual-Purpose Dairy Cows And Its Influence On Economically Important Breeding Traits, Mark E. Armitage, Emma Swan, Denise O'Meara

SURE Journal: Science Undergraduate Research Experience Journal

Background
Over the last 10 years, the discovery of individual, or candidate, genes that influence economically important traits has revolutionised how the dairy industry selects cows for breeding programmes. One such gene, the diacylglycerol O-acyltransferase 1 (DGAT1) gene is significant in dairy production as it is associated with the synthesis of fat in milk, and polymorphisms within the gene can be used for selection purposes. In this study, the variants (genotypes) of the K232A polymorphism of the DGAT1 gene, within a dual-purpose dairy herd, bred for both dairy and beef production, were determined, and compared to the Economic …

Quantification Of Tylosin Antibiotics In Cattle Waste, Appala Keerthi

Masters Theses & Specialist Projects

Antibiotics are used as prophylactic agents to promote growth and for treating infections in animals. However, the irrational use of antibiotics in livestock management is a significant cause of the development of antibioticresistant genes in the environment. Each year 2 million people suffer from the infections caused by bacteria which are resistant to antibiotics and 23,000 of these people are estimated to die because of antibiotic resistance. New drugs are continually coming into the market but are at the risk of developing resistance. Thus, there is a need for the development of analytical methods which can be used to monitor …

Radical Social Ecology As Deep Pragmatism: A Call To The Abolition Of Systemic Dissonance And The Minimization Of Entropic Chaos, Arielle Brender

Student Theses 2015-Present

This paper aims to shed light on the dissonance caused by the superimposition of Dominant Human Systems on Natural Systems. I highlight the synthetic nature of Dominant Human Systems as egoic and linguistic phenomenon manufactured by a mere portion of the human population, which renders them inherently oppressive unto peoples and landscapes whose wisdom were barred from the design process. In pursuing a radical pragmatic approach to mending the simultaneous oppression and destruction of the human being and the earth, I highlight the necessity of minimizing entropic chaos caused by excess energy expenditure, an essential feature of systems that aim …

What’S At Steak? The Political Discourse Of Emissions Intensity And Implications Of Animal Agriculture, Kalyn Simon

Master's Theses

This thesis analyzes the international discourse of greenhouse gas emissions in relation to livestock production. Specific government ministries, research institutes, and multilateral organizations are framing a new strategy to mitigate emissions by using emissions intensity metrics. Emissions intensity is a ratio comparing emissions produced per unit of animal product as oppose to measuring absolute emissions. This research is acknowledged as a win-win scenario which allows for a reduction of greenhouse gas emissions while continuing production more efficiently. This thesis outlines the emergence of this metric in international discourse and the implications this shift has on the livestock sector globally. Ultimately, …

Genome-Wide Association Analysis With A 50k Transcribed Gene Snp-Chip Identifies Qtl Affecting Muscle Yield In Rainbow Trout, Mohamed Salem, Rafet Al-Tobasei, Ali Ali, Daniela Lourenco, Guangtu Gao, Yniv Palti, Brett Kenney, Timothy D. Leeds

Faculty & Staff Scholarship

Detection of coding/functional SNPs that change the biological function of a gene may lead to identification of putative causative alleles within QTL regions and discovery of genetic markers with large effects on phenotypes. This study has two-fold objectives, first to develop, and validate a 50K transcribed gene SNP-chip using RNA-Seq data. To achieve this objective, two bioinformatics pipelines, GATK and SAMtools, were used to identify ∼21K transcribed SNPs with allelic imbalances associated with important aquaculture production traits including body weight, muscle yield, muscle fat content, shear force, and whiteness in addition to resistance/susceptibility to bacterial cold-water disease (BCWD). SNPs ere …

Predicting Energy And Water Consumption On Dairy Farms Through Statistical Analysis And Machine-Learning Methods, Philip Shine

Theses

With the abolishment of milking quotas across all European Union member states in April 2015, dairy farmers must adjust their farming practises to minimise milk production costs to adequately prepare for potential periods of reduced revenue. Milk production is an intense energy and water consuming process. Coupled with challenging European greenhouse gas reduction targets and legislation regarding the prevention of groundwater pollution and deterioration, increasing the production of milk in Ireland must be met with the sustainable consumption of on-farm energy and direct water resources, to ensure the future monetary and environmental sustainability of Ireland’s dairy industry. Thus, this body …

The Use Of Machine Learning To Detect Suckling In Pre-Weaned Calves, Sukumar Katamreddy

Theses

The weaning of cattle is a process which is known to be labour intensive and to have stressful effects on both cow and calf Common methods used in the weaning process include the temporary removal of a mother from the calf and manual observation and intervention. Early and speedy weaning is known to have a number of benefits, including health benefits for both cow and calf, additional weight gains for the calves as well as reduced labour and feed requirements. The process known as Two-Stage Weaning is recognised to be an effective low-stress approach to weaning in which the calf …

Feasibility, Safety, Economic And Environmental Implications Of Whey-Recovered Water For Cleaning-In Place Systems: A Case Study On Water Conservation For The Dairy Industry, Yulie E. Meneses-GonzáLez

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Several countries around the world are facing the challenge of producing food with limited water resources for a growing population. This reality is forcing all sectors involved in the food supply chain to look for water conservation strategies that contribute to assure global food security. Besides water consumption, the food industry has to deal with wastewater generation; therefore, water reconditioning and reuse is an attractive solution to address both issues. The goal of this research was to demonstrate that high quality water can be recovered from whey, a by-product of the cheese making process, and reused in cleaning-in place (CIP) …

Methane Production By A Packed-Bed Anaerobic Digester Fed Dairy Barn Flush Water, Sean Richard Thomson

Master's Theses

Packed-bed digesters are an alternative to covered lagoon digesters for methane production and anaerobic treatment of dilute wastewaters such as dairy barn flush water. The physical media of packed-beds retain biofilms, often allowing increased treatment rates. Previous studies have evaluated several types of media for digestion of dilute wastewaters, but cost and media fouling have setback commercial development. A major operational cost has been effluent recirculation pumping.

In the present effort, a novel approach to anaerobic digestion of flush dairy water was developed at pilot-scale: broken walnut shells were used as a low-cost packed-bed medium and effluent recirculation was replaced …

The Effects That Liquid And Solid Cattle Manure Have On The Water Quality Of Drainage Ditches In Putnam County, Ohio, Janelle Horstman

Honors Projects

Lake Erie has experienced harmful algal blooms with increased frequency since the mid-1990s due to excess nutrients from Rivers, such as the Maumee River, and largely agricultural watersheds. Nonpoint source pollution from agriculture contributes to eutrophication, algal blooms, and the degradation of water quality. This creates stress on aquatic fauna, reduced aesthetic quality, odor, and limits of the water for usage of drinking, recreation, and industry. This research paper asks what the contributions of having access to manure application records, soil records, and information about antibiotics have on what is known about manure management and antibiotic resistance, which has been …

Maine Learns To Love Dairying, Erin Love

Historical Ecology Atlas of New England

The transition from subsistence to commercial farming is a defining trend in Maine dairying that continues today. Technological advances that often caused large landscape scale changes were catalysts in the division between small and large farmers. The industry developed in a relatively short time period—the last thirty years of the 19th century—but the characteristic divide between large and small farmers has continued to be exacerbated.

Greener Pastures 1 - The Greener Pasture Project: Managing Nutrients In Dairy Pastures, John Lucey, Mike Bolland, Don Bennett, Richard Morris, Bill Russell, Martin Staines

Bulletins 4000 -

As dairy farmers have strived to maintain profitability, many have farmed more intensively. More cows are milked and increasing inputs of fertiliser and purchased feed are used per hectare. However, these increased nutrient inputs have far exceeded the increase in nutrient output in milk production. The increasing nutrient surplus (inputs minus outputs) from intensification on dairy farms has met with increasing community concern about the environmental footprint of the dairy industry. In some other countries, dairy farmers who have intensified by increasing nitrogen inputs are now faced with legislation controlling the amount of fertiliser nitrogen that they can use.

The …

Lime For High Rainfall Pastures: Above 800mm Average Annual Rainfall, Mike Bolland, Bill Russell

Bulletins 4000 -

Conventional agriculture acidifies soil. As your soil becomes more acid, productive pasture species disappear and are replaced by species of low agricultural value. It is a waste of money to apply expensive fertiliser to pastures which are inherently poorly productive because they are growing in an acid soil.

The paper examines the types of lime available, how to select lime for quality and when and how much lime to apply. Maganese toxity and aluminum toxicity are examine, how to test your soil, and affect of soil acidity on bacteria and other microorgansims.

Interview With Melissa & Rod Volbeda, Willamette Valley Cheese, 2007 (Audio), Melissa Volbeda, Rod Volbeda

All Sustainability History Project Oral Histories

Interview of Melissa and Rod Volbeda by Magda Gaytan on August 6th, 2007.

Willamette Valley Cheese Company tour photos available for download.

Returns To R&D Investment Of Dafwa: Benefit Cost Analysis, 2005-2006, Nazrul Islam

Bulletins 4000 -

The primary outcome or objective of the projects that are assessed, is to increase the market competitiveness and profitability of agri-industry.

Anaerobic Digester Use In Dairy Farms In The United States, Shaun Elsasser

UNLV Theses, Dissertations, Professional Papers, and Capstones

Anaerobic digestion is a highly efficient process, trapping the methane gas from cow manure and processing it into energy. The steep initial capital costs make anaerobic digesters short-term liabilities, but the long-term benefits far outweigh the long-term costs. An anaerobic digester unit will begin to show a profit after approximately five years of operation. During the lifetime of the unit, estimated at 15 years, the digester will have produced about $ 1,000,000 in profits for the dairy farm, while also providing invaluable benefits to society as a whole.

Impacts Of A Manure Composting Program On Stream Water Quality, A. Bekele, A. M.S. Mcfarland, A. J. Whisenant

Faculty Publications

In February 2001, the Texas Commission on Environmental Quality (TCEQ) adopted a Total Maximum Daily Load (TMDL) for soluble reactive phosphorus (SRP) along the North Bosque River. Within this TMDL, dairy waste application fields were identified as the major nonpoint-source contribution of nutrients. In September 2000, a manure composting program was initiated that resulted in about 500,000 metric tons of dairy manure being hauled to composting facilities and exported from the watershed through December 2004. To evaluate the impact of the manure composting program on stream water quality, storm event mean concentrations of nutrients and total suspended solids were compared …

Fiber Optic Sensor Response To High Levels Of Fat In Cream, Czarena L. Crofcheck, Frederick A. Payne, Clair L. Hicks, M. Pinar Mengüç, Sue E. Nokes

Biosystems and Agricultural Engineering Faculty Publications

A light backscatter technique using optical fibers to deliver and receive light was investigated for measuring the milkfat content of unhomogenized cream. Light backscatter through cream at wavelengths of 450 to 900 nm was measured for fiber separation distances from 2 to 6.5 mm and for cream containing 10 to ~40 weight percent (wt%) milkfat. Unhomogenized cream (~40 wt% milkfat) was mixed with skim milk (~0.05 wt% milkfat) to yield samples with five different milkfat levels. Three optical response models were tested for correlation with milkfat content: one using the light intensity measurement at a single separation distance, the second …