Aquaculture and Fisheries Commons^™

An Assessment Of Burbot Life History In Minnesota With A Focus On Movement Dynamics And Spawning Vulnerability, Tyler Robinson

Biology Graduate Theses

Burbot have a circumpolar range spanning from rivers of Alaska to lentic systems in Minnesota. Although Burbot population dynamics have been studied, their movement dynamics have been rarely investigated. Our objectives were to assess seasonal home range changes of Burbot in a closed-lentic system and quantify the scale of spawning aggregations. Sixty-six Burbot were implanted with acoustic transmitters in Bad Medicine Lake, Minnesota, with 32 surviving the length of the study period between 10 April 2019 to 11 June 2020. The peak spawning date for Burbot in Bad Medicine Lake was estimated to be mid-March, when home range estimates were …

Sensitivity Of A Lamp Assay For Detection Of The Dinoflagellate Amyloodinium Ocellatum In Simulated Field Conditions And Freeze Tolerance Of The Parasite, Robert Gonzales

Master's Theses

The obligate parasitic dinoflagellate Amyloodinium ocellatum causes amyloodiniosis in warm water marine fishes. The prolific parasite, which has a direct, three-stage life cycle, is highly infectious and can cause heavy losses in aquaculture. Prevention, biosecurity, and early detection are vital for control. In this work, microscopy and a loop-mediated isothermal amplification (LAMP) assay were compared for early diagnosis of A. ocellatum in cultured stocks, and the freeze tolerance of tomonts was assessed to determine if frozen wild fish used as fish food can serve as a potential vector for the parasite.

The lowest dinospore concentration that could be detected by …

Checklist Of Zooplankton Of The Halda River, Chattogram, Bangladesh, Md. Safiqul Islam, M.A. Azadi, Munira Nasiruddin, Md. Tajul Islam

Journal of Bioresource Management

The River Halda is one of the important natural breeding grounds of Indian major carp (Labeo rohita, Labeo calbasu, Gibelion catla, Cirrhinus mrigala) in Bangladesh for its unique physicochemical and biological properties of water. The productivity of the Halda ecosystem mainly depends on the plankton diversity. Zooplankton directly affects the productivity of the Halda River ecosystem. Research work was conducted for the two years extending from January 2017 to December 2018 to identify the zooplankton community of the Halda River. A total of 71 species of zooplankton under 37 genera belonging to 9 groups were identified. The dominant …

The Role Of Leaf Decomposition In Macroinvertebrate Colonization, Bethany Mabel Lian Schorr, Kevin Geedey

Independent Research Projects

Decomposition plays an important ecological role in carbon and nutrient cycling that supply food and energy resources to food webs. This study investigates the potential role that leaf decomposition of different leaf species may play in macroinvertebrate assemblages in upper Midwest streams. We hypothesized that the different decomposition rates experienced with different leaf species and in different streams would have an effect on invertebrate colonization due to the variance in nutrient availability. Due to altered fire regimes and other influences, forests are experiencing declines in fire-adapted, heliophytic species such as oaks and compositional shifts toward shade-tolerant, mesophytic species such as …

Phylogenetic Analysis Of Tilapia Lake Virus (Tilv) Isolates From The Philippines Based On Partial Genome Segment 3 Sequences [Research Note], Dan Joseph C. Logronio, Joselito R. Somga, Maria Rowena R. Romana-Eguia, Sonia Somga, Demy Catedral, Gonzalo Jr Coloma

The Philippine Agricultural Scientist

This study aimed to expand current knowledge on TiLV genetic diversity by sequence analysis of a portion of genome segment 3 of TiLV detected from the Philippines. This includes a recently deposited sequence in GenBank (Accession No. LC504279) and six new sequences from cases of infection reported from 2017 to 2020. Phylogenetic analysis of 179 bp fragment of segment 3 showed that the seven TiLV isolates from the Philippines can be divided into three phylogenetic groups. When comparing all sequences, unique nucleotide substitutions and amino acids were noted among these groups. Variation in mortality rates in naturally infected samples was …

You Can’T Betray A Fish: One Reason Eating Fish May Cause Less Harm Than Eating Cows, Ronald G. Oldfield

Faculty Scholarship

In The Ultimate Betrayal: Is There Happy Meat?, Bohanec (2013) proposed that farmed animals raised humanely may experience betrayal when slaughtered. I argue based on personal experience that humans often betray trust relationships with farmed animals. Using published scientific literature, I find that typical farmed animals (mammals) and farmed fishes are both cognitively capable of a rudimentary experience of betrayal. However, the manner in which fishes are typically maintained does not present opportunities for human-fish trust relationships to develop. Eating farmed fishes presents fewer ethical implications than eating cows, at least in some cases.

This article was featured in …

Houtman Abrolhos Islands Fish Habitat Protection Area: A Summary Of Marine Resource Use And Ecological Attributes, Scott N. Evans, Nick Konzewitsch, Lynda M. Bellchambers

Fisheries Research Reports

The Houtman Abrolhos Islands (Abrolhos) is an archipelago of up to 210 small islands and associated reefs located approximately 65-90 km offshore from Geraldton, Western Australia (WA). The islands and waters of the Abrolhos are of significance for both land-based and marine based values. The marine state territorial waters of the Abrolhos are managed by the Department of Primary Industries and Regional Development (DPIRD) as the Houtman Abrolhos Islands Fish Habitat Protection Area (Abrolhos FHPA). This report aims to provide a summary of the DPIRD data on aquatic resource use (e.g., aquaculture, commercial, recreational and charter fishing) and ecological attributes …

Global And Regional Sea Level Rise Scenarios For The United States: Updated Mean Projections And Extreme Weather Level Probabilities Along U.S. Coastlines, William V. Sweet, Benjamin D. Hamlington, Robert E. Kopp, Christopher P. Weaver, Patrick L. Barnard, David Bekaert, William Brooks, Michael Craghan, Gregory Dusek, Thomas Frederikse, Gregory Garner, Ayesha S. Genz, John P. Krasting, Eric Larour, Doug Marcy, John J. Marra, Jayantha Obeysekera, Mark Osler, Matthew Pendleton, Daniel Roman, Lauren Schmied, Will Veatch, Kathleen D. White, Casey Zuzak

National Oceanographic and Atmospheric Administration: Technical Reports and Related Materials

This report and accompanying datasets from the U.S. Sea Level Rise and Coastal Flood Hazard Scenarios and Tools Interagency Task Force provide 1) sea level rise scenarios to 2150 by decade that include estimates of vertical land motion and 2) a set of extreme water level probabilities for various heights along the U.S. coastline. These data are available at 1-degree grids along the U.S. coastline and downscaled specifically at NOAA tide-gauge locations. Estimates of flood exposure are assessed using contemporary U.S. coastal flood-severity thresholds for current conditions (e.g., sea levels and infrastructure footprint) and for the next 30 years (out …

Crassostrea Gigas Invasion In Southern California: Macrofaunal Diversity And Local Community Impacts Of Ecosystem Engineers On Estuarine Habitats, Noah Jansen-Yee

Theses

Many marine ecosystems are facing the growing threat of biological invasions. These invasions can have a variety of different impacts on ecosystems and their inhabitants. The Pacific oyster, Crassostrea gigas, is currently in the relatively early stages of invasion in San Diego estuaries. Crassostrea gigas is a large, filter-feeding bivalve that forms dense oyster beds on hard substrate. These oysters are known to outcompete native counterparts and drastically alter habitats where they are present. Crassostrea gigas is an ecosystem engineer that, through shell creation and formation of a dense oyster matrix, impacts ecosystems in a variety of direct and indirect …

Invasive Plants Watch List: 2022, Allison Zach

Nebraska Invasive Species Program

The purpose of the weed watch list is to collect data on the distribution of invasive plants found in various Nebraska counties. Counties were divided up into ‘ecoregions’ based on the Nebraska Game & Parks Commission’s Legacy Plan (map of regions below). The plants in the watch list have been identified based on their invasiveness in surrounding states and their increasing range in Nebraska. Data collected on watch list plant species distribution has been used to support the listing or delisting of noxious weeds. Plant species in the weed watch list are categorized based on early detection and rapid response …

Underwater Video As A Tool To Quantify Fish Density In Complex Coastal Habitats, Ronald Baker, Dakota Bilbrey, Aaron Bland, Frank D’Alonzo Iii, Hannah Ehrmann, Sharon Havard, Zoe Porter, Sarah Ramsden, Alexandra Rodriquez

University Faculty and Staff Publications

Habitat loss is a serious issue threatening biodiversity across the planet, including coastal habitats that support important fish populations. Many coastal areas have been extensively modified by the construction of infrastructure such as ports, seawalls, docks, and armored shorelines. In addition, habitat restoration and enhancement projects often include constructed breakwaters or reefs. Such infrastructure may have incidental or intended habitat values for fish, yet their physical complexity makes quantitatively sampling these habitats with traditional gears challenging. We used a fleet of unbaited underwater video cameras to quantify fish communities across a variety of constructed and natural habitats in Perdido and …

Fish And Invertebrate Use Of Restored Vs. Natural Oyster Reefs In A Shallow Temperate Latitude Estuary, Jonathan H. Grabowski, Christopher J. Baillie, Adam Baukus, Rachael Carlyle, F. Joel Fodrie, Rachel K. Gittman, A. Randall Hughes, David L. Kimbro, Juhyung Lee, Hunter S. Lenihan, Sean P. Powers, Kevin Sullivan

University Faculty and Staff Publications

Coastal marine habitats continue to be degraded, thereby compelling largescale restoration in many parts of the world. Whether restored habitats function similarly to natural habitats and fully recover lost ecosystem services is unclear. In estuaries, oyster reefs have been degraded by multiple anthropogenic activities including destructive fishing practices and reduced water quality, motivating restoration to maintain oyster fisheries and other ecosystem services, often at relatively high cost. We compared fish and invertebrate communities on recently restored (0–1 year post-restoration), older restored (3–4 years post-restoration), and natural oyster reefs to determine if and when restored reefs support functionally similar faunal communities. …

Population Dynamics, Relative Abundance, And Habitat Suitability Of Adult Red Drum (Sciaenops Ocellatus) In Nearshore Waters Of The North-Central Gulf Of Mexico, Crystal Hightower, J. Marcus Drymon, Amanda E. Jefferson, Matthew B. Jargowsky, Emily A. Seubert, Simon Dedman, John Mareska, Sean P. Powers

University Faculty and Staff Publications

In the Gulf of Mexico, the red drum (Sciaenops ocellatus) is an immensely popular sportfish, yet the Gulf of Mexico stock is currently managed as data-limited in federal waters. The results of the federal stock assessment conducted in 2016 for Gulf of Mexico red drum were not recommended for providing management advice. Consequently, we sought to address data gaps highlighted in the assessment by producing up-to- date overall and sex-specific growth models, standardized indices of relative abundance, and predictions of habitat suitability and by updating estimates of natural mortality. Using a time series for the period of 2006–2018, we assigned …

Translocation Of Timber Rattlesnakes At Two West Virginia State Forests, Elizabeth Morgan Johnson

Theses, Dissertations and Capstones

In wildlife management, translocation is defined as the purposeful movement of an individual(s) from one place to another with a wildlife management goal. Translocation has become a common tool for mitigating negative human-wildlife interactions. We conducted a translocation study on timber rattlesnakes (Crotalus horridus) in response to numerous human-rattlesnake encounters with the goal of developing a translocation protocol that would allow natural resources personnel to mitigate negative encounters between the public and rattlesnakes and reduce impacts to local timber rattlesnake populations. In this study, we scaled translocation distance to site-specific home range characteristics to assess whether translocation outcomes …

Western Australian Sea Cucumber Resource Assessment Report, A.M. Hart, D.M. Murphy, F.F. Fabris

Fisheries Research Reports

No abstract provided.

Ecological Risk Assessment For The Western Rock Lobster Resource : Workshop Procedure And Outcomes, R Stoklosa

Fisheries Occasional Publications

No abstract provided.

Movement Probabilities Of Bigheaded Carps (Hypophthalmichthys Spp.) In The Illinois River Estimated From Markov Chain Monte Carlo Methods, A. A. Coulter, M. K. Brey, M. Lubjeko, J. L. Kalis, D. Coulter, D. C. Glover, G. W. Whitledge, J. E. Garvey

NRM Departmental Data Sets

Previously published work used program MARK to estimate parameters for multistate models for Bighead Carp (Hypophthalmichthys nobilis) and Silver Carp (H. molitrix) (Coulter et al. 2018) movements in the Illinois River. Multistate models estimate transition probability (psi), survival probability (S), and detection probability (p) and models with those parameters varying by state and time (state*time), just state (state), just time (time), and neither (.) were evaluated for each species (Coulter et al. 2018). Using the format of the top model for each species identified in Coulter et al. (2018), Markov Chain Monte Carlo (MCMC) methods were …

Species-Specific Responses To Landscape Features Shaped Genomic Structure Within Alaska Galliformes, Sarah A. Sonsthagen, Robert E. Wilson, Sandra L. Talbot

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Aim: Connectivity is vital to the resiliency of populations to environmental change and stochastic events, especially for cold-adapted species as Arctic and alpine tundra habitats retract as the climate warms. We examined the influence of past and current landscapes on genomic connectivity in cold-adapted galliformes as a critical first step to assess the vulnerability of Alaska ptarmigan and grouse to environmental change. We hypothesize that the mosaic of physical features and habitat within Alaska promoted the formation of genetic structure across species.

Location: Alaska, United States of America.

Taxa: Ptarmigan and Grouse (Galliformes: Tetraoninae).

Methods: We collected double digest restriction-site- …

Fish Community Trends In The Greenup Pool, Ohio River, Nathaniel Kingsley Fleshman

Theses, Dissertations and Capstones

Bighead carp (Hypophthalmichthys nobilis) and silver carp (H. molitrix), collectively referred to as Asian carps, are invasive species that may negatively affect native species through plankton resource exploitation mechanisms. Bighead and silver carp escaped into the Mississippi River basin in the early 1970s and have been steadily migrating upstream. The Greenup Pool lies upstream of the current known invasion of Asian carp in the Ohio River. The Ohio River Valley Water Sanitation Commission (ORSANCO) has conducted probabilistic electrofishing community surveys in the Greenup Pool since 2006 on a five-year cycle. The objective of this study was …

Spatial And Temporal Variability Of Mercury In Upper And Lower Red Lake Walleye, Tyler Orgon

Biology Graduate Theses

Mercury is a global pollutant that is released into our environment by natural and anthropogenic processes resulting in extensive studies conducted on mercury cycling in aquatic ecosystems which has led to the issuance of human-health-based fish-consumption advisories. We examined total mercury concentrations in Walleye Sander vitreus from Upper and Lower Red Lakes, located in north central Minnesota, between 2019 and 2020. Upper and Lower Red Lake form a contiguous water body consisting of two large (483.1 and 665.6 km2, respectively) basins that are naturally connected by a 1.4 km-wide strait. Both basins are important fisheries for recreation, subsistence, and commercial …

Stomach Contents And Stable Isotope Analysis Reveal Ontogenetic Shifts And Spatial Variability In Brama Australis Diet, Sebastian A. Klarian, Eric T. Schultz, María Francisca Hernández, Juan Antonio Valdes, Francisco Fernandoy, Mónica Barros, Sergio Neira, Hugo Arancibia

EEB Articles

Many marine fisheries rely on production and energy flow in the pelagic zone, thus sustainable management of exploited pelagic fishes benefits from insight into temporal, spatial and ontogenetic variability in the trophic ecology of these species. Here we analyze stomach contents and stable isotopes to reveal spatial variability (focusing on two fishing grounds, north and south of an oceanographic barrier in the Pacific Ocean) and ontogenetic changes (contrasting immature and mature) in Southern Ray’s Bream (Brama australis) diet composition in Chilean waters. Stomach contents analysis indicated that euphausiids were predominant components of the diet in both fishing grounds and ontogenetic …

Seasonal Reproductive Allocation In Landlocked Alewife Alosa Pseudoharengus, In The Context Of Niche Construction And Eco-Evolutionary Feedbacks, Foivos Mouchlianitis, Eric T. Schultz, Kostas Ganias

EEB Articles

The bidirectional dynamics between species and their biotic and abiotic environments, known as eco-evolutionary feedbacks, may shift the direction of evolution and alter the ecological role of species. Alewife, Alosa pseudoharengus, is an exemplary species to study reciprocal feedbacks between ecology and evolution, owing to repeated independent derivations of a landlocked life history from an ancestral anadromous form. In this study we analysed the reproductive allocation during the spawning season in a landlocked Alewife population in the context of eco-evolutionary feedbacks. We also compared our findings with previous results from a neighbouring anadromous population of the species. Similarities were found …

Decapods As Food, Companions And Research Animals: Legal Impact Of Ascribing Sentience, Jonathan J. Cooper, Ambrose Tinarwo, Beth A. Ventura

Animal Sentience

This commentary provides an overview of the practical implications of attributing sentience to protect decapods as food, companion and research animals in the UK context. Recognising their capacity to suffer has implications for humane slaughter in farming and fishing sectors. It should also place a greater duty of care on owners of captive decapods, considering their needs and avoiding unnecessary suffering. The recognition of decapod sentience should also have an impact on their protection as research animals, although research with a potential to cause suffering may be needed to better understand decapods’ capacity to suffer.

River Report. State Of The Lower St. Johns River Basin, Florida: Water Quality, Fisheries, Aquatic Life, Contaminants, 2022., Environmental Protection Board, City Of Jacksonville, University Of North Florida, Jacksonville University, Gerry Pinto, Gretchen Bielmyer-Fraser, John Burr, Dale Casamatta, Charles Closmann, Brian P. Zoellner, Ashley Johnson, An-Phong Le, William Penwell, Radha Pyati

State of the River Report

No abstract provided.

Analysis Of Hematocrit Levels In Walleye Sander Vitreus From Similar Waterbodies, Alyssa Hauser

Journal of Earth and Life Science

Walleye Sander vitreus are a popular fish among anglers and hold a prominent place in Minnesotan’s identity as their state fish. Because of this, multiple management practices are used to ensure the continued health of their populations within Minnesota waters. In this study, the process of analyzing hematocrit levels was used to determine if the analysis of hematological parameters could be a useful tool in detecting differences in population health. To evaluate this, blood samples were acquired from age-0 and age-1 fish from two similar lakes and run through a hematocrit centrifuge to separate platelets from plasma to read the …

The Effects Of Diet On Yellow Perch Morphology Throughout Lake Bemidji, Quiana L. Radaich

Journal of Earth and Life Science

Morphology is very important as it looks at the arrangement of an organism’s parts to determine their functionality, development, and how they could have changed through evolution. It is also important for the identification of species as it can show how closely species are related. This study examines if the morphology of yellow perch changes throughout Lake Bemidji. Along with examining a subset of five stomachs for each group (A-F) of yellow perch collected to determine if diet was a driving force behind morphological changes. The data collected in this study suggested that morphology does change throughout Lake Bemidji and …

Final Report Floating Upwelling System Harvest Road Oceans, Robert Michael, Scott Bennett

Fisheries Occasional Publications

A Floating Upwelling System or FLUPSY is a mechanical system for the culture of seed stock during the nursery stage of commercial bivalve production.

Comparison Of Bigheaded Carp Reproduction In Tributaries Of The Illinois And Wabash Rivers, David J. Yff

Masters Theses

Understanding environmental conditions that support bigheaded carp (Hypophthalmichthys sp.) reproduction in tributary rivers provides key predictions of their invasion throughout the United States. Past research, primarily in larger order rivers, identified factors such as discharge, temperature, and turbidity as main environmental drivers of bigheaded carp reproduction. I used the variable hydrologic conditions between the Illinois and Wabash Rivers to compare environmental conditions between tributaries of each basin, determine which conditions influence bigheaded carp reproduction in tributaries, and predict tributaries likely to support bigheaded carp reproduction. Three tributaries of the Illinois and Wabash Rivers were sampled for ichthyoplankton from …

Differences In The Growth And Bioenergetics Between Centrarchids In A Midwestern Power Plant Lake, Kyle Joseph Rempe

Masters Theses

Black Crappie Pomoxis nigromaculatus and Bluegill Lepomis macrochirus are popular sportfishes that co-occur in similar bodies of water throughout most of the Central and Eastern United States but have distinct thermal physiologies. L. macrochirus is often found in warmer regions of freshwater reservoirs, where P. nigromaculatus tends to exploit cooler regions, especially in power plant cooling reservoirs. The coal-fired Coffeen Power Station ceased energy production in October 2019, providing an ideal scenario to study the organismal effects of the sudden shift in thermal regime. Previous studies showed that P. nigromaculatus inhabited the less thermally-impacted areas of Coffeen Lake, whereas L. …

Modification Of Culture Medium And Identification Of Microbial Contaminants For Improved In Vitro Propagation Of Freshwater Mussels, Raquel M. Wetzell

Theses and Dissertations

In vitro propagation efforts play an essential role in conserving and restoring threatened freshwater mussel populations by circumventing the need for a fish host. Across a broad range of taxa, transformation is induced with an artificial M199 medium and rabbit serum. However, such formulation may not be sufficient in culturing critical species with more specific physiological requirements. In this study, multiple serum mixtures were tested to improve in vitro transformation of two freshwater mussel species: yellow lampmussel (Lampsilis cariosa) and tidewater mucket (Atlantaconcha ochracea). These species were selected because they parasitize similar fish host species but …