Animal Sciences Commons^™

Cheatgrass Die-Off Phenomena: What Are The Short And Long Term Recovery Factors Of Bromus Tectorum Stand Failure?, Joshua Alan Nicholson

Theses and Dissertations

Observations of Bromus tectorum L. (cheatgrass or downy brome) monocultures have shown that populations are susceptible to stand die-off or replacement failures. Die-offs, where the seed bank from the previous year fails to emerge, occurs in cheatgrass stands and it is unclear the trigger or cause. The fungus Fusarium has been identified in plant and seed samples from die-offs and may drive die-off activity through pathogenicity. Die-off recovery may take several years but cheatgrass populations eventually reestablish. The purpose of our study was to determine whether Fusarium is a potential player in a die-off, and understand how die-offs recover after …

Fuel Response To Mechanical Mastication Of Pinyon-Juniper Woodlands In Utah, Alan Wyatt Shakespear

Theses and Dissertations

Pinyon-juniper woodland encroachment threatens ecosystem function and diversity on sagebrush steppe. Decreased fire frequency likely favors proliferation of pinyon-juniper woodlands and subsequent decline in desirable understory species. Increased tree cover produces hazardous canopy fuel loads that contribute to severe crown fires and threaten life and property at the wildland-urban-interface. Mechanical mastication converts large canopy fuels into small woody debris, altering wildfire dynamics from a potential crown fire to a more controllable surface fire. We measured fuel loading and cover on untreated, masticated, and masticated + burned treatments on 30-m transects within 30 X 33-m subplots, representing 45 different sites throughout …

Fire And Ungulate Herbivory Differentially Affect The Sexual Reproduction Of Generalist And Specialist Pollinated Plants, Andrew Hollis Lybbert

Theses and Dissertations

Currently the size and frequency of wildfires are increasing at a global scale, including arid ecosystems that exhibit great sensitivity to disturbance. Fire effects on plant pollination and reproductive success in deserts are largely unknown. Plant dependence on animal pollinators for reproduction can increase the risk of reproductive failure if pollination services are hindered or lost. Species that depend on few taxonomically related pollinator species are expected to be most negatively affected by disturbances that disrupt pollination interactions. To assess fire and isolation effects on reproductive success in desert plant communities, and how wildfire influences the pollination success of generalist …

Evaluation Of Porcine Ipec-J2 Cell Line Growth Rate And Immune Response To E. Coli (0111:B4) Lps, Xiaofan Wang

Graduate Theses and Dissertations

The objective of this study was to evaluate the intestinal porcine epithelial cell-jejunum 2 (IPEC-J2) cell line as a model to study the innate immune function of live pigs. Growth rates of IPEC-J2 cells in T-75 flasks and 96-well plates were evaluated using a hemocytometer and spectrophotometer for cell quantity measurements to determine growth rate and doubling time. Growth rates of IPEC-J2 cells in T-75 flasks and 96-well plates were 0.4016 and 0.2851 times of doubling/day respectively with a doubling time of 1.73 d and 2.43 d, respectively. Confluent IPEC-J2 monolayers were tested at five time intervals (0, 1, 2, …

Central Administration Of Neuropeptide Y (Npy) And Vasotocin 4 Receptor (Vt4r/V1ar) Antagonists On Food Intake And A Stress Response In Chicks, Megan Ann Hancock

Graduate Theses and Dissertations

The objective of this study was to determine the central effect of the VT4R antagonists (SR-49059 and H-5350 (Manning compound)) on corticosterone (CORT) levels during stress and food intake. A 22-gauge stainless steel guide cannula was surgically implanted into the lateral ventricle of the birds. A preliminary study was done to test the antagonists and their role on food intake. Birds were injected with saline, NPY (4µg), NPY (4µg)+SR-49059 (250ng), or NPY (4µg)+Manning compound (250ng). Birds injected with saline had the lowest 1h food intake (17.7g1.6). Birds injected with NPY+saline had a significantly higher intake (27.1g 1.0), which was enhanced …

Evaluation Of Betaine And Methionine Replacement For Improving Performance And Meat Quality For Broilers Reared Under Higher Temperature Conditions, Malea Graham Frank

Graduate Theses and Dissertations

4,096 broiler chicks were randomly allocated to 128 floor pens (32 birds/pen). 2,048 day-old male broilers were placed in the east end of a barn, and the following week 2,048 day-old male broilers were placed in the west end. At each placement day, half of the chicks were Cobb 500 and half were Ross 708, and each pen contained only one breed source. East end birds received coccidiostat in the feed, west end received coccidial vaccine, and each end was under separate environmental control. Eight diets contained two levels of coccidiostat (0, 1 lb./ton), methionine (deficient, adequate), and betaine (0, …

Breathing Life Into Fisheries Stock Assessments With Citizen Science, David V. Fairclough, Jamin I. Brown, B J. Carlish, Brett M. Crisafulli, Ian S. Keay

Fisheries Research Articles

Citizen science offers a potentially cost-effective way for researchers to obtain large data sets over large spatial scales. However, it is not used widely to support biological data collection for fisheries stock assessments. Overfishing of demersal fishes along 1,000 km of the west Australian coast led to restrictive management to recover stocks. This diminished opportunities for scientists to cost-effectively monitor stock recovery via fishery-dependent sampling, particularly of the recreational fishing sector. As fishery-independent methods would be too expensive and logistically-challenging to implement, a citizen science program, Send us your skeletons (SUYS), was developed. SUYS asks recreational fishers to voluntarily donate …

Population Genetics Of Seaside Sparrow (Ammodramus Maritimus) Subspecies Along The Gulf Of Mexico., Stefan Woltmann, Phillip C. Stouffer, Christine M. Bergeon Burns, Mark S. Woodrey, Mollie F. Cashner, Sabrina S. Taylor

CREC Publications

Seaside Sparrows (Ammodramus maritimus) along the Gulf of Mexico are currently recognized as four subspecies, including taxa in Florida (A. m. juncicola and A. m. peninsulae) and southern Texas (Ammodramus m. sennetti), plus a widespread taxon between them (A. m. fisheri). We examined population genetic structure of this "Gulf Coast" clade using microsatellite and mtDNA data. Results of Bayesian analyses (Structure, GeneLand) of microsatellite data from nine locations do not entirely align with current subspecific taxonomy. Ammodramus m. sennetti from southern Texas is significantly differentiated from all other populations, but we found evidence of an admixture zone with A. m. …

Variability In The Spatial And Temporal Patterns Of Larval Scombrid Abundance In The Gulf Of Mexico, Sennai Y. Habtes

USF Tampa Graduate Theses and Dissertations

Accurate fishery-independent methods for assessing the abundance of marine fish stocks are important tools for proper pelagic fisheries management. The review and improvement of standardized sampling methods used in fisheries-independent sampling, and the establishment of improved models of abundance and population dynamics utilizing novel statistical techniques for fisheries management will further improve our understanding of the way in which marine fish stocks vary spatially and temporally. One of the most important and longest running surveys of fisheries-independent data in the Southeastern United States is the spring ichthyoplankton survey conducted through the Southeast Area Mapping and Assessment Program (SEAMAP).

These surveys …

Glucose Significantly Enhances Enterotoxigenic Escherichia Coli Adherence To Intestinal Epithelial Cells Through Its Effects On Heat-Labile Enterotoxin Production, Prageeth Wijemanne, Rodney A. Moxley

School of Veterinary and Biomedical Sciences: Faculty Publications

The present study tested whether exposure of enterotoxigenic Escherichia coli (ETEC) to glucose at different concentrations in the media results in increased bacterial adherence to host cells through increased heat-labile enterotoxin (LT) production, thereby suggesting the effects are physiological. Porcine-origin ETEC strains grown in Casamino acid yeast extract medium containing different concentrations of glucose were washed and inoculated onto IPEC-J2 porcine intestinal epithelial cells to test for effects on adherence and host cell cAMP concentrations. Consistent with previous studies, all LT+ strains had higher ETEC adherence to IPEC-J2 cells than did LT2 strains. Adherence of the LT2 but not the …

Pathogenic Landscape Of Transboundary Zoonotic Diseases In The Mexico–Us Border Along The Rio Grande, Maria Dolores Esteve-Gassent, Adalberto A. Pérez De León, Dora Romero-Salas, Teresa Patricia Feria-Arroyo, Ramiro Patino, John A. Goolsby

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Transboundary zoonotic diseases, several of which are vector borne, can maintain a dynamic focus and have pathogens circulating in geographic regions encircling multiple geopolitical boundaries. Global change is intensifying transboundary problems, including the spatial variation of the risk and incidence of zoonotic diseases.The complexity of these challenges can be greater in areas where rivers delineate international boundaries and encompass transitions between ecozones.The Rio Grande serves as a natural border between the US State ofTexas and the Mexican States of Chihuahua, Coahuila, Nuevo León, andTamaulipas. Not only do millions of people live in this transboundary region, but also a substantial amount …

Performance Of A Temperate-Zone Channel Catfish Biofloc Technology Production System During Winter, Bartholomew W. Green

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Channel catfish (Ictalurus punctatus) have been grown successfully in an outdoor biofloc technology production system. Outdoor biofloc production systems in the tropic sare operated year-round, whereas the channel catfish studies were conducted only during the growing season and biofloc production tanks were harvested and idled for the winter. If an outdoor biofloc production system is to be adopted by farmers at temperate latitudes, then data gaps related to system and fish performance over the winter must be addressed. The present study was conducted to address these data gaps for channel catfish culture. Waters from a recently completed biofloc …

Data For Henson Et Al. 2014, Shandelle M. Henson, James L. Hayward, Gordon Atkins, Amanda Sandler, Wadenerson Saint Martin

Faculty Publications

These data are archived for the paper "Changing sea surface temperature alters timescale of reproductive synchrony in seabirds" by Henson et al., currently submitted to Nature.

Freeing Nemo, Stephanie K. Adamczak

SURGE

Floating on the surface of the water, I observe the life teeming below me. The waves were carrying my body further and further into the beautiful reef; but all I was conscious of was the cleaner wrasse below bouncing from fish to fish, the parrotfish scraping algae from the coral, and the anemone protecting the ornate clownfish living within. [excerpt]

Use Of A Towed Camera System For Estimating Reef Fish Populations Densities On The West Florida Shelf, Sarah Elizabeth Grasty

USF Tampa Graduate Theses and Dissertations

Reef fish species tend to reside over high relief habitat which makes them difficult to sample with traditional gears such as nets and trawls. Therefore, implementing and understanding the strengths and weaknesses of new approaches which incorporate acoustic and optical methods has become a priority for reef fish stock assessment. Beginning in June of 2013, a towed camera system known as the Camera-Based Assessment Survey System (C-BASS) has been used to visualize over 500 kilometers of transect and record more than 80 hours of video over several habitats in the Gulf of Mexico. Surveys have been completed on the West …

Kentucky Warbler (Vol. 90, No. 4), Kentucky Library Research Collections

The Kentucky Warbler

No abstract provided.

Assessing The Ecological Impact Of The Western Rock Lobster Fishery In Fished And Unfished Areas Final Frdc Report – Project 2008/013, Lynda B. Bellchambers, Matthew B. Pember

Fisheries Research Reports

This project, in consultation with an industry working group, has been instrumental in establishing a closed area in the western rock lobster fishery to assess the potential ecosystem effects of removing lobster biomass from deep water (40-100 m). The major outcome of this research is an improved understanding of the ecosystem that supports the western rock lobster. These types of information for improve the Department of Fisheries’ ability to manage the fishery in an ecosystem based manner and provide scientifically defensible data to more precisely assess the level of risk of the fishery to deep water communities. In early 2013, …

Shark Bay Prawn Managed Fishery : Bycatch Action Plan : 2014 – 2019 : Version 1.0, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

Fisheries Management Paper No.266 - Exmouth Gulf Prawn Managed Fishery Bycatch Action Plan 2014-2019. Version 1.0, Department Of Fisheries, Western Australia

Fisheries Management Papers

Bycatch is described as the part of the catch which is returned to the sea (usually referred to as non-retained or discarded) either because it has no commercial value or because legislative requirements preclude it being retained. Thus, this Bycatch Action Plan (BAP) includes unmarketable finfish and invertebrate species, along with endangered, threatened and protected (ETP) species, such as marine mammals, reptiles and some elasmobranchs.

It is Government policy to minimise bycatch in all commercial fisheries. This BAP details a program of actions to address bycatch issues in the Exmouth Gulf Prawn Managed Fishery (EGPMF), in accordance with the EGPMF …

Fisheries Management Paper No.265 - Exmouth Gulf Prawn Managed Fishery Harvest Strategy 2014 - 2019 Version 1.0, Department Of Fisheries Western Australia

Fisheries Management Papers

This fishery-specific harvest strategy has been developed in line with the Department of Fisheries' (Department) over-arching Harvest Strategy Policy for Aquatic Resources (Department of Fisheries in prep.) and in consultation with licensees. The broad scope of the Harvest Strategy Policy for Aquatic Resources is consistent with the National Harvest Strategy Guidelines but as well as considering all retained target species, it also incorporates retained non-target species, bycatch' and other ecological components to ensure the risks to these elements are managed effectively.

The Exmouth Gulf Prawn Managed Fishery (EGPMF) harvest strategy outlines the longand short-term fishery-specific management objectives; a description of …

Phylogenetic Analysis Of Algal Symbionts Associated With Four North American Amphibian Egg Masses, Eunsoo Kim, Yuan Lin, Ryan R. Kerney, Lili Blumenberg, Cory Bishop

Biology Faculty Publications

Egg masses of the yellow-spotted salamander Ambystoma maculatum form an association with the green alga “Oophila amblystomatis” (Lambert ex Wille), which, in addition to growing within individual egg capsules, has recently been reported to invade embryonic tissues and cells. The binomial O. amblystomatis refers to the algae that occur in A. maculatum egg capsules, but it is unknown whether this population of symbionts constitutes one or several different algal taxa. Moreover, it is unknown whether egg masses across the geographic range of A. maculatum, or other amphibians, associate with one or multiple algal taxa. To address these …

Spatiotemporal Variation In Flow-Dependent Recruitment Of Long-Lived Riverine Fish: Model Development And Evaluation, Daisuke Goto, Martin J. Hamel, Jeremy J. Hammen, Mathew L. Rugg, Mark A. Pegg, Valery E. Forbes

School of Biological Sciences: Faculty Publications

Abstract Natural flow regimes can play a major role as an overarching ecosystem driver in reproduction and recruitment of riverine fishes. Human needs for freshwater however have altered hydrology of many riverine systems worldwide, threatening fish population sustainability. To understand and predict how spatiotemporal dynamics of flow regimes influence reproductive and recruitment variability, and ultimately population sustainability of shovelnose sturgeon (Scaphirhynchus platorynchus), we develop a spatially explicit (1D) individual-based population model that mechanistically (via energetics-based processes) simulates daily activities (dispersal, spawning, foraging, growth, and survival). With field observations of sturgeon and habitat conditions in a major tributary of …

Restoration Of Bison (Bison Bison) To Agate Fossil Beds National Monument, A Feasibility Study, Daniel S. Licht

United States National Park Service: Publications

Executive Summary

Agate Fossil Beds National Monument is a 3,057-acre park located in western Nebraska. The unit is comprised of northern mixed-grass prairie vegetation, typical of the Northern Great Plains. Weather, fire, and grazing are generally considered to be the ecological drivers of prairie ecosystems and critical for prairie health. However, grazing has essentially been absent since the 1960s. In 2014, a Department of the Interior report explicitly listed the park as a high priority for bison restoration. This report evaluates the feasibility, management options, benefits, and challenges of restoring bison to Agate Fossil Beds National Monument.

A potential bison …

Comparison Of Three Cidr-Based Fixed-Time Ai Protocols In Beef Heifers, G.A. Bridges, J.A. Walker, S.L. Lake, S.G. Kruse, S.L. Bird, B.J. Funnell, R. Arias, J.K. Grant

Animal Science Faculty Publications

Several effective fixed-time AI (FTAI) protocols have been developed to facilitate AI in beef heifers that circumvent the need for estrus detection. Among these are the 5-d CO-Synch + controlled intravaginal progesterone insert (CIDR) protocol (5dCO), PGF2α (PG) 6-d CIDR protocol (PG-6dCIDR), and 14-d CIDR-PG protocol (14dCIDR-PG). Although each of these protocols varies in duration and approach to synchronizing estrus and ovulation, each has been reported as an effective method to facilitate FTAI in beef heifers. Therefore, the objective of this study was to compare FTAI pregnancy rates in beef heifers synchronized with these 3 CIDR-based protocols. Virgin beef heifers …

Eight Legged Encounters, Eileen A. Hebets

Eileen Hebets Publications

This program was funded in part by a National Science Foundation grant (DRL–1241482 to EAH). Material was developed in collaboration with Marie- Claire Chelini, Jessie Rose Storz, Cody Storz, and Malcolm Rosenthal. Steven Schwartz, Jason Stafstrom, Kathy French, Priscilla Grew, and Judy Diamond were all extremely helpful in grant writing, facilitating the first live event, and/or discussions. Pawl Tisdale (artist) was phenomenal to work with on all aspects of the project!

TABLE OF CONTENTS

CLASSIFICATION & TAXONOMY STATIONS
I. WHAT IS AN ARTHROPOD? page 4 a. The goal of this station is to introduce the audience to some basic information …

Species Identification And Phylogeny Of Phycinae Hakes And Related Gadoid Fishes, Laura Ann Whitefleet-Smith

All Theses And Dissertations

The term hake refers to a number of species belonging to multiple families of fish in the suborder Gadoidei and includes two main groups: Phycinae hakes (family Gadidae) and Merluccius spp. hakes (family Merlucciidae). The use of the common name hake for this diverse group of fish prompts questions such as: how are these species related and how can they be differentiated? Chapter one details the development of the Rapid Gadoid Identification Assay (RaGIA) for molecular identification of 11 gadoid fishes (including six hakes) using Polymerase Chain Reaction Restriction Fragment Length Polymorphism (PCR-RFLP). RaGIA was used for species identification of …

Over 75 Years Of Zooplankton Data From Australia, Claire H. Davies, Amelia J. Armstrong, Mark Baird, Frank Coman, Steven Edgar, Daniel J. Gaughan, Jack Greenwood, Felipe Gusmao, Natasha Henschke, J. Anthony Koslow, Sophie C. Leterme, A. David Mckinnon, Margaret Miller, Sarah Pausina, Julian Uribe Palomino, Ruben-Lee Roennfeldt, Peter Rothlisberg, Anita Slotwinski, Joanna Strzelecki, Iain M. Suthers, Kerrie M. Swadling, Sam Talbot, Mark Tonks, David H. Tranter, Jock W. Young, Anthony J. Richardson

Fisheries Research Articles

Zooplankton are the key trophic link between primary producers and fish in pelagic ecosystems. Historically, there are few zooplankton time series in Australia, with no data sets longer than two years prior to 2008. Here we compile 98 676 abundance records of more than 1000 zooplankton taxa from unpublished research cruises, student projects, published literature, and the recent Integrated Marine Observing System (IMOS). This data set covers the entire coastal and shelf region of Australia and dates back to 1938. Most records are for copepods, but there are also data for other taxa such as decapods, chaetognaths, thaliaceans, appendicularians, and …

Arkansas Animal Science Department Report 2014, David L. Kreider, Paul Beck

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

Hydrolyzed Tuna Meat By-Product Supplement For Juvenile Red Sea Bream, Pagrus Major, And Its Effect On Growth, Enzyme Activity, Plasma Parameters, And Apparent Nutrient Digestibility, Janice A. Ragaza, Roger Edward P. Mamauag, Shunsuke Koshio, Manabu Ishikawa, Saichiro Yokoyama

Biology Faculty Publications

A growth experiment was conducted on juvenile red sea bream, Pagrus major to investigate the effect of the inclusion in fish diets, of tuna meat by-product hydrolysate which was processed through enzymatic hydrolysis using a commercially available enzyme, derived from Bacillus subtilis. Six experimental diets were formulated in the experiment. Three diets contained 50, 150 and 250 g/kg of TPM-H (tuna meat by-product hydrolysate), and two diets with the unprocessed TPM (tuna meat by-product) at an inclusion level of 50 and 250 g/kg. A control diet was formulated without any addition of the test ingredients. Treatment diets were fed ad …

Palo Alto Battlefield National Historical Park Breeding Bird Monitoring Data Fy 2014, Kenneth D. Pruitt

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Data are part of the GULN Inventory and Monitoring Program Land bird monitoring project for PAAL. Data were collected by Kenneth Pruit through a cooperative agreement with GULN and UT Brownsville in 2014. A separate reference is available for the Field Sheets that accompanies this data set.

https://irma.nps.gov/DataStore/Reference/Profile/2218507