Animal Sciences Commons^™

In Memory Of Margaret Triplett

Nebraska Bird Review

The NOU lost a longtime member in Kearney on August 7, 2014, when Margaret Sealing Triplett died.

First Documented Nest Of Northern Saw-Whet Owl In Nebraska, Wayne J. Mollhoff

Nebraska Bird Review

Northern Saw-whet Owl was added to our avifauna with a list prepared by Taylor and Van Vleet (1889). The first suggestion of breeding was a second-hand report included in a paper presented at the first meeting of the Nebraska Ornithologists' Union in 1899 by M. A. Carriker, Jr., who "was told of a set of five eggs collected near Nebraska City about seven years ago" (1900), but which included no other details. At the next meeting, Bruner (1901) cited that report to include the species on a list of birds that breed in the state. Bruner, Swenk, and Walcott later …

Cheatgrass Die-Off Phenomena: What Are The Short And Long Term Recovery Factors Of Bromus Tectorum Stand Failure?, Joshua Alan Nicholson

Theses and Dissertations

Observations of Bromus tectorum L. (cheatgrass or downy brome) monocultures have shown that populations are susceptible to stand die-off or replacement failures. Die-offs, where the seed bank from the previous year fails to emerge, occurs in cheatgrass stands and it is unclear the trigger or cause. The fungus Fusarium has been identified in plant and seed samples from die-offs and may drive die-off activity through pathogenicity. Die-off recovery may take several years but cheatgrass populations eventually reestablish. The purpose of our study was to determine whether Fusarium is a potential player in a die-off, and understand how die-offs recover after …

Fuel Response To Mechanical Mastication Of Pinyon-Juniper Woodlands In Utah, Alan Wyatt Shakespear

Theses and Dissertations

Pinyon-juniper woodland encroachment threatens ecosystem function and diversity on sagebrush steppe. Decreased fire frequency likely favors proliferation of pinyon-juniper woodlands and subsequent decline in desirable understory species. Increased tree cover produces hazardous canopy fuel loads that contribute to severe crown fires and threaten life and property at the wildland-urban-interface. Mechanical mastication converts large canopy fuels into small woody debris, altering wildfire dynamics from a potential crown fire to a more controllable surface fire. We measured fuel loading and cover on untreated, masticated, and masticated + burned treatments on 30-m transects within 30 X 33-m subplots, representing 45 different sites throughout …

Fire And Ungulate Herbivory Differentially Affect The Sexual Reproduction Of Generalist And Specialist Pollinated Plants, Andrew Hollis Lybbert

Theses and Dissertations

Currently the size and frequency of wildfires are increasing at a global scale, including arid ecosystems that exhibit great sensitivity to disturbance. Fire effects on plant pollination and reproductive success in deserts are largely unknown. Plant dependence on animal pollinators for reproduction can increase the risk of reproductive failure if pollination services are hindered or lost. Species that depend on few taxonomically related pollinator species are expected to be most negatively affected by disturbances that disrupt pollination interactions. To assess fire and isolation effects on reproductive success in desert plant communities, and how wildfire influences the pollination success of generalist …

Uk Ag Equine Programs 2015 Calendar: A 12-Month Planning Calendar For The Care And Use Of Your Horses, Jason Phillips, Glenn Mackie, Don Sorrell, Nicholas L. Carter, Paula A. Jerrell, Brian Newman, Daniel Wilson, Christopher Jeffcoat, Karen Douglas, Katheryn L. Cerny, Fernanda Camargo, Robert Coleman, Essie Rodgers, Jim Smith

Agriculture and Natural Resources Publications

The information in this calendar is provided to aid owners in planning for the care and use of their horses. When necessary, information is discussed in the month prior to application to allow horse owners adequate time to plan for activities such as weed control, soil testing, and vaccinations.

Contact your local veterinarian for health-related issues and your county extension agent for further information. Phone numbers are listed at the end of the calendar.

The Effects Of Conjugated Linoleic Acid Supplementation On Lipopolysaccharide-Challenged Synoviocytes, Allison Millican

All Theses

Osteoarthritis is one of the leading causes of lameness in the athletic horse. Cases of equine osteoarthritis typically present with synovitis, or inflammation of the synovium. This inflammation in the synovium leads to the production of inflammatory cytokines and eicosanoids. Although these downstream products can be beneficial, overproduction can lead to degradation of cartilage and joint disease. Opportunities to help mitigate or decrease inflammation within the joint are of current interest to the equine industry. One method being investigated is nutritional supplementation. The anti-inflammatory effects demonstrated by CLA supplementation make it a potential prospect for utilization in mitigating joint inflammation. …

Wildlife Deterrence Method Test Device, Garrett Tietz, Adam Webb, Dane Knutson

Mechanical Engineering

The objective of the Deer Busters team is to design and build a device or system of devices that will be used to determine which method, or methods, are most effective at deer deterrence. JumpSport suspects that a method which gives the appearance of approach to the deer in an aggressive or startling manner but also changes the way it attacks so that the deer do not get used to the device will be most effective. Deer Busters is committed to the completion of the deer deterrent testing device by the end of the fall quarter of 2014.

There May Not Always Be More Fish In The Sea: Why Noaa’S Restrictions Do Not Violate The Magnuson-Stevens Act, Lindsey Nicolai

William & Mary Environmental Law and Policy Review

No abstract provided.

Jellyfish, Forage Fish, And The World's Major Fisheries, Kelly L. Robinson, James J. Ruzicka, Mary Beth Decker, Richard D. Brodeur, Frank J. Hernandez, Javier Quiñones, E. Marcelo Acha, Shin-Ichi Uye, Hermes Mianzan, William M. Graham

Faculty Publications

A majority of the world’s largest net-based fisheries target planktivorous forage fish that serve as a critical trophic link between the plankton and upper-level consumers such as large predatory fishes, seabirds, and marine mammals. Because the plankton production that drives forage fish also drives jellyfish production, these taxa often overlap in space, time, and diet in coastal ecosystems. This overlap likely leads to predatory and competitive interactions, as jellyfish are effective predators of fish early life stages and zooplankton. The trophic interplay between these groups is made more complex by the harvest of forage fish, which presumably releases jellyfish from …

A Study Of The American Black Bear (Ursus Americanus) In Utah: An Analysis Of The Post-Denning Activities And Bear-Human Conflict, Julie Ann Miller

Theses and Dissertations

This study examined two different aspects of black bear (Ursus americanus) ecology in Utah. First, we determined the post-denning behaviors of female black bears in order to help management agencies protect bears from human disturbances as well as set spring hunts that minimize the taking of females with dependent young. We looked at the timing of den emergence (X = 25 March), the number of days at the den site post emergence (X = 11 days), and departure (X = 8 April) for female black bears in Utah from 2011—2013. We also analyzed the effects of cohort (lone …

Dialect Use Within A Socially Fluid Group Of Southern Resident Killer Whales, Orcinus Orca, Courtney Elizabeth Smith

Master's Theses

Resident killer whales, Orcinus orca, of the Northeastern Pacific form stable kinship-based matrifocal associations and communicate with group-specific repertoires of discrete calls (dialects) that reflect these associations. The gradual fission of matrilines is usually consistent with dialect variations among groups that may manifest as differences in call usage at the repertoire level or subtle structural differences of the calls themselves. Therefore, matrilines that are more closely related tend to be more acoustically similar. Within the endangered community of Southern Resident killer whales (SRKWs), recent evidence shows that one particular group (L pod) exhibits the lowest rate of intrapod association …

Effects Of Feeding Distillers Grains Throughout A Yearling Heifer Beef Production System On Meat Quality Attributes And Effects Of Omnigen-Af With Ractopamine Hydrochloride On Animal Performance And Beef Carcass Characteristics Of Feedlot Steers, Kelby M. Sudbeck

Department of Animal Science: Dissertations, Theses, and Student Research

Heifers (n = 229; 225 kg ± 2) were used in a 2 x 2 x 2 factorial to determine the effects of longterm exposure to corn distillers grains plus solubles (DGS) on meat quality characteristics. Factors included supplementing 0.91 kg (LW) or 2.3 kg (HW) modified DGS (MDGS) while grazing corn stalks; 0.6% BW dry DGS (SS) daily or none (NS) during summer grazing; and finishing diet containing 40% wet corn gluten feed (CGF) or 40% MDGS (DGF) on a DM basis. An interaction was observed within CGF for discoloration, with SS increasing discoloration 30%; but no differences between …

Examining Predation As A Possible Means Of Controlling Crown-Of- Thorns Starfish (Acanthaster Planci) Outbreaks On Reefs Around Lizard Island, Australia, Amanda Chan

Independent Study Project (ISP) Collection

Since the world’s coral reefs are currently threatened by a variety of different natural and anthropogenic factors, research on protecting coral reefs is pivotal to protect these diverse ecosystems. However, only Indo-Pacific reefs such as the Great Barrier Reef are dying due to a corallivorous echinoderm threat known as the Crown-of-Thorns Starfish (Acanthaster planci). A. planci is a starfish which feeds on coral tissue and can quickly reduce coral cover on a reef during an outbreak. Although scientists are still unsure as to what causes these outbreaks, one suggestion is the predator-removal theory. The predator removal-theory states that major predators …

Index-Based Insurance And Risk Management Among Nomadic Mongolian Herders , Kelsey Larson

Independent Study Project (ISP) Collection

Mongolian herders must contend with the risk of dzuds, harsh winters that can kill large numbers of livestock. To do so, they use a mixture of formal financial tools and traditional risk mitigation techniques. This paper is a study of the interaction between the Mongolian Index-based Livestock Insurance Program and traditional informal risk mitigation techniques. The researcher interviews herders in Bulgan soum, Arhangai aimag and Galuut soum, Bayanhongor aimag to compare the IBLI program’s impact in a community that has had IBLI since 2006 and one that only received IBLI in 2012. This study finds that insurance purchase is positively …

New Study Of Altitude And Butterfly Diversity Evaluation Of Butterfly Diversity In La Hesperia And Influence Of Altitude On Diversity, Savannah Artusi

Independent Study Project (ISP) Collection

Due to the increasing effects of climate change, studies focusing on bioindicator species are becoming more necessary than ever. Additionally, knowledge about global biodiversity can be very useful to conservation organizations because it helps them determine what areas need to be conserved the most .Butterflies are useful as bioindicators due to their complex life cycles, importance in the food chain, and sensitivity to environmental changes. This project focused on studying the overall biodiversity of butterflies in the La Hesperia reserve. In addition, this study aimed to determine how butterfly diversity varies at different altitudes. To do this, the reserve was …

New Observations Of The Andean Ibis (Theristicus Branickii, Threskiornithidae): Distribution, Movements, And Behavior Near Volcán Antisana, Benjamin West

Independent Study Project (ISP) Collection

The Andean Ibis (Theristicus branickii) of the highland grasslands of Ecuador, Peru, and Bolivia is listed globally as Near Threatened and Critically Endangered in Ecuador. The Ecuadorian population is estimated at 100 individuals and is restricted to the vicinities of Volcán Antisana and Volcán Cotopaxi. Knowledge of the nesting biology of the Andean Ibis in Ecuador consists of a single filming in 1989. Much of its general ecology and movements is also unknown. The purpose of this study was to find evidence of nesting ibis in Ecuador while also collecting data on behavior, population, movements and interspecific interactions. Data was …

The Impacts Of Feral Horses On The Use Of Water By Pronghorn On The Sheldon National Wildlife Refuge, Nevada, Amy Marie Gooch

Theses and Dissertations

Feral horses occupy 31.6 million acres throughout western North America. Feral horses share similar habitats with a wide range of animal species, including pronghorn. Since horses are larger and often more aggressive than other animals of this region, they are generally socially dominant over all other native ungulate species. Pronghorn share water sources with horses in areas where both occur. In situations where horses exclude pronghorn from water, pronghorn fitness may be impaired, especially during the hottest months of the year when water is limited. The purpose of this study was to investigate interference competition between pronghorn and feral horses …

Comparative Genomics Reveals Insights Into Avian Genome Evolution And Adaptation, Guojie Zhang, Cai Li, Qiye Li, Bo Li, Dennis M. Larkin, Chul Lee, Jay F. Storz, Agostinho Antunes, Matthew J. Greenwold, Robert W. Meredith, Anders Ödeen, Jie Cui, Qi Zhou, Luohao Xu, Hailin Pan, Zongji Wang, Lijun Jin, Pei Zhang, Haofu Hu, Wei Yang, Jiang Hu, Jin Xiao, Zhikai Yang, Yang Liu, Qiaolin Xie, Hao Yu, Jinmin Lian, Ping Wen, Fang Zhang, Hui Li, Yongli Zeng, Zijun Xiong, Shiping Liu, Long Zhou, Zhiyong Huang, Na An, Jie Wang, Quimei Zheng, Yingqi Xiong, Guangbiao Wang, Bo Wang, Jingjing Wang, Yu Fan, Rute R. Da Fonseca, Alonzo Alfaro-Núñez, Mikkel Schubert, Ludovic Orlando, Tobias Mourier, Jason T. Howard, Ganeshkumar Ganapathy, Andreas Pfenning, Osceola Whitney, Miriam V. Rivas, Erina Hara, Julia Smith, Marta Farré, Jitendra Narayan, Gancho Slavov, Michael N. Romanov, Rui Borges, João Paulo Machado, Imran Khan, Mark S. Springer, John Gatesy, Federico G. Hoffmann, Juan C. Opazo, Olle Håstad, Roger H. Sawyer, Heebal Kim, Kyu-Won Kim, Hyeon Jeong Kim, Seoae Cho, Ning Li, Yinhua Huang, Michael W. Bruford, Xiangjiang Zhan, Andrew Dixon, Mads F. Bertelsen, Elizabeth Derryberry, Wesley Warren, Richard K. Wilson, Shengbin Li, David A. Ray, Richard E. Green, Stephen J. O'Brien, Darren Griffin, Warren E. Johnson, David Haussler, Oliver A. Ryder, Eske Willerslev, Gary R. Graves, Per Alström, Jon Fjeldså, David P. Mindell, Scott V. Edwards, Edward L. Braun, Carsten Rahbek, David W. Burt, Peter Houde, Yong Zhang, Huanming Yang, Jian Wang, Avian Genome Consortium, Erich D. Jarvis, M. Thomas P. Gilbert, Jun Wang

Jay F. Storz Publications

Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant clades. The avian genome is principally characterized by its constrained size, which predominantly arose because of lineage-specific erosion of repetitive elements, large segmental deletions, and gene loss. Avian genomes furthermore show a remarkably high degree of evolutionary stasis at the levels of nucleotide sequence, gene synteny, and chromosomal structure. Despite this pattern of conservation, we detected many non-neutral evolutionary changes in protein-coding genes and noncoding regions. These analyses …

Methane Production By A Packed-Bed Anaerobic Digester Fed Dairy Barn Flush Water, Sean Richard Thomson

Master's Theses

Packed-bed digesters are an alternative to covered lagoon digesters for methane production and anaerobic treatment of dilute wastewaters such as dairy barn flush water. The physical media of packed-beds retain biofilms, often allowing increased treatment rates. Previous studies have evaluated several types of media for digestion of dilute wastewaters, but cost and media fouling have setback commercial development. A major operational cost has been effluent recirculation pumping.

In the present effort, a novel approach to anaerobic digestion of flush dairy water was developed at pilot-scale: broken walnut shells were used as a low-cost packed-bed medium and effluent recirculation was replaced …

Managing Devil Facial Tumour Disease In Tasmanian Devils (Sarcophilus Harrisii): An Investigation Of Heat Shock Proteins As Potential Vaccine Adjuvants, Monika Payerhin

Independent Study Project (ISP) Collection

The world’s largest carnivorous marsupial, the Tasmanian devil (Sarcophilus harrisii), is facing extinction from a deadly, highly communicable cancer that has already decimated over 85% of devil populations in the wild: devil facial tumour disease (DFTD). DFTD cells effectively evade recognition by the immune system, and every devil that contracts the disease dies from it. Many attempts have been made at developing a vaccine that could help save this now-threatened species. Heat shock proteins have been linked to enhanced immune recognition of pathogens, making them potential candidates for acting as adjuvants to such a vaccine against DFTD. In this study, …

The Effects Of Limestone Particle Size On Bone Health And Performance Of Pullets And Hens In Conventional Cage And Alternative Housing Systems, Pamela E. Eusebio Balcazar

Department of Animal Science: Dissertations, Theses, and Student Research

One of the major welfare issues in cage-free housing systems is bone fracture. The goal of this research was to improve bone health in layers by building better pullet skeletons and to investigate limestone particle size (LPS) effects on bone health in conventional cages and cage-free housing systems. Study 1 was a preliminary study that compared conventional cages with litter floor pens in terms of performance, bone health, and eggshell quality from 33 to 47 wk of age. Caged hens had higher egg production and eggshell strength, and improved feed efficiency, but lower tibia bone mineral content compared to floor …

Energy Value Of De-Oiled Distillers’ Grains Plus Solubles In Beef Cattle Diets, Meredith L. Bremer

Department of Animal Science: Dissertations, Theses, and Student Research

Ethanol plants are centrifuging off oil from the thin stillage stream as it has added market value currently. The impact of oil removal on cattle performance has been minimally researched. Thus four trials, one growing, one digestion, and two feedlot, were designed to determine the energy and feeding value of de-oiled distillers grains in beef cattle diets.

In growing cattle diets, diet concentration of modified distillers grains plus solubles (MDGS) impacted cattle performance more than oil content. Ending BW, ADG, and G:F did not differ between cattle fed de-oiled or full fat MDGS, however cattle fed de-oiled MDGS had lower …

Effects Of Step Training On The Kidneys Following Spinal Cord Injury In Rats., Pradeepa Poudyal

Electronic Theses and Dissertations

Detrusor-sphincter dyssynergia after chronic spinal cord injury (SCI) leads to over-distention, high bladder pressures and vesico-ureteric reflux into the kidney, resulting in repeated infections and pyelonephritis. Given the importance/limited knowledge of SCI effects on the upper urinary tract, this study assessed expression of two proteins in the kidneys of contused (T9) male rats relative to controls that are indicative of tissue stress/damage (TGFβ, CD11b). The impact of two therapeutic rehabilitation strategies, 60 minutes of step training and general exercise, was then assessed on these protein levels relative to non-trained SCI controls, plus the effectiveness of a shorter training duration (30 …

Evaluation Of Porcine Ipec-J2 Cell Line Growth Rate And Immune Response To E. Coli (0111:B4) Lps, Xiaofan Wang

Graduate Theses and Dissertations

The objective of this study was to evaluate the intestinal porcine epithelial cell-jejunum 2 (IPEC-J2) cell line as a model to study the innate immune function of live pigs. Growth rates of IPEC-J2 cells in T-75 flasks and 96-well plates were evaluated using a hemocytometer and spectrophotometer for cell quantity measurements to determine growth rate and doubling time. Growth rates of IPEC-J2 cells in T-75 flasks and 96-well plates were 0.4016 and 0.2851 times of doubling/day respectively with a doubling time of 1.73 d and 2.43 d, respectively. Confluent IPEC-J2 monolayers were tested at five time intervals (0, 1, 2, …

Central Administration Of Neuropeptide Y (Npy) And Vasotocin 4 Receptor (Vt4r/V1ar) Antagonists On Food Intake And A Stress Response In Chicks, Megan Ann Hancock

Graduate Theses and Dissertations

The objective of this study was to determine the central effect of the VT4R antagonists (SR-49059 and H-5350 (Manning compound)) on corticosterone (CORT) levels during stress and food intake. A 22-gauge stainless steel guide cannula was surgically implanted into the lateral ventricle of the birds. A preliminary study was done to test the antagonists and their role on food intake. Birds were injected with saline, NPY (4µg), NPY (4µg)+SR-49059 (250ng), or NPY (4µg)+Manning compound (250ng). Birds injected with saline had the lowest 1h food intake (17.7g1.6). Birds injected with NPY+saline had a significantly higher intake (27.1g 1.0), which was enhanced …

Evaluation Of Betaine And Methionine Replacement For Improving Performance And Meat Quality For Broilers Reared Under Higher Temperature Conditions, Malea Graham Frank

Graduate Theses and Dissertations

4,096 broiler chicks were randomly allocated to 128 floor pens (32 birds/pen). 2,048 day-old male broilers were placed in the east end of a barn, and the following week 2,048 day-old male broilers were placed in the west end. At each placement day, half of the chicks were Cobb 500 and half were Ross 708, and each pen contained only one breed source. East end birds received coccidiostat in the feed, west end received coccidial vaccine, and each end was under separate environmental control. Eight diets contained two levels of coccidiostat (0, 1 lb./ton), methionine (deficient, adequate), and betaine (0, …

Identification And The Significance Of Selective Proteins In Bile And Plasma Of Normal And Health-Compromised Chickens, Balamurugan Packialakshmi

Graduate Theses and Dissertations

During the last 50 years, animal breeding programs in commercial poultry have made significant progress in the bodyweight gain of broilers but led to several metabolic and skeletal disorders. Lameness associated with proximal femur known as femoral head separation (FHS) or femoral head necrosis (FHN) is one of the major metabolic disorders in poultry industry. In order to select for healthy chickens, markers that can distinguish between healthy and affected birds are required. Biomarkers from blood represent an ideal and rich source of markers which can be obtained using minimally invasive methods. The biomarkers were explored in an experimental model …

Targeted Sequencing Of Plant Genomes , Mark D. Huynh

Theses and Dissertations

Next-generation sequencing (NGS) has revolutionized the field of genetics by providing a means for fast and relatively affordable sequencing. With the advancement of NGS, whole- genome sequencing (WGS) has become more commonplace. However, sequencing an entire genome is still not cost effective or even beneficial in all cases. In studies that do not require a whole-genome survey, WGS yields lower sequencing depth and sequencing of uninformative loci. Targeted sequencing utilizes the speed and low cost of NGS while providing deeper coverage for desired loci. This thesis applies targeted sequencing to the genomes of two different, non-model plants, Artemisia tridentate (sagebrush) …

Molecular Mapping Of Qtls For Domestication-Related Traits In Cowpea (V. Unguiculata (L.) Walp.), Mebeaselassie Andargie, Remy S. Pasquet, Bhavani S. Gowda, Geoffrey M. Muluvi, Michael P. Timko

All Peer-Reviewed Publications

Understanding the genetic basis underlying domestication-related traits (DRTs) of cowpea (Vigna unguiculata (L.) Walp.) is important since the genome has experienced divergent domestication and in addition it is also useful to utilize the wild germplasm efficiently for improving different traits of the cultivated cowpea. Quantitative trait loci (QTLs) for DRTs were identified in a population of 159 F7 recombinant inbred lines derived from a cross between a domesticated cowpea (V. unguiculata (L.) Walp.) variety, 524B, and a wild accession, 219. Using the constructed linkage map, QTLs for 10 DRTs were analysed and mapped. QTLs for seed, pod and flower related …