Agriculture Commons^™

Tree Biomass – A Fragile Carbon Storage In Old-Growth Birch And Aspen Stands In Hemiboreal Latvia, Laura Ķēniņa, Didzis Elferts, Ieva Jaunslaviete, Endijs Bāders, Guntars Šņepsts, Āris Jansons

Aspen Bibliography

Birch (Betula pendula Roth, Betula pubescens Ehrh.) and European aspen (Populus tremula L.) stands dominate the deciduous forests of Northern Europe. Due to increasing forest protections, more deciduous stands will reach the old-growth stage. Thus, data on the carbon storage potential in such areas are essential. We aimed to establish a benchmark for carbon stocks of the main carbon pools in old-growth deciduous hemiboreal stands. Carbon pools were calculated from measurements in forty old-growth (104–148 years-old) deciduous stands in forests on fertile mineral soil. The carbon stock in these stands is distributed across tree biomass (~ 60%), mineral soil (~ …

Transformation And Gene Editing In The Bioenergy Grass Miscanthus, Anthony Trieu, Mohammad B. Belaff, Pradeepa Hirannaiah, Shilpa Manjunatha, Rebekah Wood, Yokshitha Bathula, Rebecca L. Billingsley, Anjali Arpan, Erik J. Sacks, Thomas E. Clemente, Stephen P. Moose, Nancy A. Reichert, Kankshita Swaminathan

Department of Agronomy and Horticulture: Faculty Publications

Background: Miscanthus, a C4 member of Poaceae, is a promising perennial crop for bioenergy, renewable bioproducts, and carbon sequestration. Species of interest include nothospecies M. x giganteus and its parental species M. sacchariforus and M. sinensis. Use of biotechnology-based procedures to genetically improve Miscanthus, to date, have only included plant transformation procedures for introduction of exogenous genes into the host genome at random, non-targeted sites.

Results: We developed gene editing procedures for Miscanthus using CRISPR/Cas9 that enabled the mutation of a specific (targeted) endogenous gene to knock out its function. Classified as paleo-allopolyploids (duplicated ancient …

Easy Calibration For Backpack And Canister (Handheld) Sprayers, Cody Zesiger, Kalen Taylor, Corey Ransom, Earl Creech, Matt Yost

All Current Publications

When applying pesticides, fertilizers, and other chemicals, the applicator should know the amount of chemical applied to the treated area. Calibration is a method an applicator can use to measure and set the application rate. If sprayers are not properly calibrated, it can result in over or under application of chemicals, causing damage, reduced pest control, and potential safety concerns. Making the effort to properly mix chemicals and calibrate sprayers can save money and increase treatment effectiveness. This fact sheet provides simple guidelines for calibrating backpack and canister sprayers.

Aspen Leaves As A "Chemical Landscape" For Fungal Endophyte Diversity - Can Nitrogen And Herbivory Shape The Community Composition In Controlled Conditions?, Johanna Witzell, Vicki Huizu Guo Decker, Marta Agostinelli, Carmen Romeralo Tapia, Michelle Cleary, Benedicte Riber Albrectsen

Aspen Bibliography

The endophytic microbiome may influence the ecological performance of plants, including forest trees. Various abiotic and biotic factors may shape the endophyte communities directly but also indirectly, by modifying the quality of host plants as a substrate. We hypothesized that potentially antifungal or fungistatic condensed tannins (CTs) would determine the quality of aspen (Populus tremula) leaves as a substrate for endophytic fungi. By subjecting the plants to nitrogen fertilization (N) or herbivory (H; leaf beetles) we aimed to change the internal “chemical landscape”, especially the CT levels, in aspen leaves. We expected that this would lead to changes in the …

Easy Calibration For Boom Sprayers, Cody Zesiger, Kalen Taylor, Corey Ransom, Earl Creech, Matt Yost

All Current Publications

Calibrating spray equipment is an important first step when applying pesticides, fertilizers, and other chemicals. If nozzles are not properly calibrated, it can result in over or under application of chemicals, causing crop damage, reduced pest control, and potential safety concerns. Making the effort to properly mix chemicals and calibrate sprayers can save money and headaches in the long run. This fact sheet provides simple guidelines for calibrating boom sprayers.

Yield Prediction Through Integration Of Genetic, Environment, And Management Data Through Deep Learning, Daniel R. Kick, Jason G. Wallace, James C. Schnable, Judith M. Kolkman, Barış Alaca, Timothy M. Beissinger, Jode Edwards, David Ertl, Sherry Flint-Garcia, Joseph L. Gage, Candice N. Hirsch, Joseph E. Knoll, Natalia De Leon, Dayane C. Lima, Danilo E. Moreta, Maninder P. Singh, Addie Thompson, Teclemariam Weldekidan, Jacob D. Washburn

Department of Agronomy and Horticulture: Faculty Publications

Accurate prediction of the phenotypic outcomes produced by different combinations of genotypes, environments, and management interventions remains a key goal in biology with direct applications to agriculture, research, and conservation. The past decades have seen an expansion of new methods applied toward this goal. Here we predict maize yield using deep neural networks, compare the efficacy of 2 model development methods, and contextualize model performance using conventional linear and machine learning models. We examine the usefulness of incorporating interactions between disparate data types. We find deep learning and best linear unbiased predictor (BLUP) models with interactions had the best overall …

Pests Of Hemp In Utah, Marion Murray, Macahl Evans, Claudia Nischwitz, Austin Taylor, Cody Zesiger

All Current Publications

This guide includes information on insect and disease pests of hemp, organized by pest group. Much of the content is a result of a two-year arthropod and plant disease survey of field-grown hemp operations in northern Utah. Some pests included in this guide were not found in that survey but may be likely to occur in the future. Beneficials and natural enemies are also covered, and information on pesticides is included.

Weakly-Supervised Learning Method For The Recognition Of Potato Leaf Diseases, Junde Chen, Xiaofang Deng, Yuxin Wen, Weirong Chen, Adnan Zeb, Defu Zhang

Engineering Faculty Articles and Research

As a crucial food crop, potatoes are highly consumed worldwide, while they are also susceptible to being infected by diverse diseases. Early detection and diagnosis can prevent the epidemic of plant diseases and raise crop yields. To this end, this study proposed a weakly-supervised learning approach for the identification of potato plant diseases. The foundation network was applied with the lightweight MobileNet V2, and to enhance the learning ability for minute lesion features, we modified the existing MobileNet-V2 architecture using the fine-tuning approach conducted by transfer learning. Then, the atrous convolution along with the SPP module was embedded into the …

Genetic Variation In Common Bunt Resistance In Synthetic Hexaploid Wheat, Amira M. I. Mourad, Alexey Morgounov, P. Stephen Baenziger, Samar M. Esmail

Department of Agronomy and Horticulture: Faculty Publications

Common bunt (caused by Tilletia caries and T. Foetida) is a major wheat disease. It occurs frequently in the USA and Turkey and damages grain yield and quality. Seed treatment with fungicides is an effective method to control this disease. However, using fungicides in organic and low-income fields is forbidden, and planting resistant cultivars are preferred. Due to the highly effective use of fungicides, little effort has been put into breeding resistant genotypes. In addition, the genetic diversity for this trait is low in modern wheat germplasm. Synthetic wheat genotypes were reported as an effective source to increase the …

Colored Sweet Bell And Tapered Pepper Cultivar Evaluation For High Tunnel Production In West-Central Indiana, 2022, Petrus Langenhoven, Lian Mahorith Duron Alvarado, Eduardo Jose Miranda Oviedo

Midwest Vegetable Trial Reports

Colored sweet bell-shaped and tapered peppers are a staple at the farmers' market. Many small and medium-sized farming operations in Indiana grow this summer crop. High tunnels allow growers to protect their crops and extend their growing season. Sweet peppers, in particular, benefit from the unique growing environment created by the high tunnel. Planting of peppers can start at least 2-4 weeks earlier in the spring, and production can continue into the fall until the first hard freeze. Pepper variety performance data for Indiana is not readily available. We are working hard to change that. Currently, we have evaluated twenty-five …

Inheritance Of 2,4‑Dichlorophenoxyacetic Acid (2,4‑D) Resistance In Amaranthus Palmeri, Chandrima Shyam, Dallas E. Peterson, Amit J. Jhala, Mithila Jugulam

Department of Agronomy and Horticulture: Faculty Publications

In this study, the inheritance of 2,4-D resistance in a multiple herbicide-resistant Palmer amaranth (KCTR) was investigated. Direct and reciprocal crosses were performed using 2,4-D-resistant KCTR and susceptible KSS plants to generate F₁ progenies. 2,4-D dose–response assays were conducted to evaluate the response of progenies from each F₁ family along with KCTR and KSS plants in controlled environmental growth chambers. Additionally, 2,4-D-resistant male and female plants from each of the F₁ families were used in pairwise crosses to generate pseudo-F₂ families. Segregation (resistance or susceptibility) of progenies from the F₂ families in response to a …

A Stealth Health Approach To Dietary Fibre, P. Stephen Baenziger, Katherine Anna Frels, Steve Greenspan, Julie Jones, Alison Lovegrove, Devin J. Rose, Peter Shewry, Rod Wallace

Department of Agronomy and Horticulture: Faculty Publications

Average dietary fibre intakes have increased little in the past twenty years in many countries, including the USA¹ . Multi-million-dollar campaigns promoting fruits, vegetables, whole grains and other foods high in fibre have delivered only small changes in diets² , and consumers have not changed from traditional staples to whole-grain options³ . UK millers report that consumption of whole-wheat bread has actually declined over the past decade (P. Shewry, personal communication). In the US, white flour, which is lower in fibre than whole-wheat flour, accounts for nearly 40% of the fibre intake⁴ . We believe that …

Impacto De Los Residuos De Cosecha En La Capacidad De Intercambio Catiónico De Suelos Entisoles, Ricardo Bueno Buelvas, John Cristhian Fernández Lizarazo

Utopía - Working papers

Los suelos del orden entisoles en Colombia suman el 24.3% del territorio nacional, son suelos jóvenes poco evolucionados que principalmente están formados de minerales primarios por este motivo entre otros son suelos poco fértiles, presentan una capacidad de intercambio catiónico muy baja. Estos suelos están dedicados a actividades productivas como la ganadería y la agricultura, la condición de baja fertilidad contribuye directamente a la pobreza rural de los habitantes y el abandono del campo. El objetivo del proyecto es evaluar el impacto de los residuos de cosecha en la capacidad de intercambio catiónico de suelos entisoles en Yopal, Casanare. Los …

Respuesta Fisiológica De Plantas De Cacao Inoculadas Con Diferentes Líneas Monospóricas De Rhizophagus Irregularis Frente Al Estrés Por Cd Y En Condiciones De Déficit Hídrico, John Cristhian Fernández Lizarazo

Utopía - Working papers

A pesar de que el cadmio se encuentra normalmente en el ambiente, su concentración ha aumentado en los últimos 100 años debido a actividades antrópicas como la minería y el uso de combustibles fósiles. Recientemente se han incluido límites a las concentraciones de cadmio en el grano de cacao ´con el propósito de evitar que concentraciones de cadmio lleguen a niveles que podrían tener un efecto negativo en los consumidores. Se ha encontrado que los hongos formadores de micorrízias arbusculares (HFMA) son importantes en los procesos de fito-remediación y que pueden facilitar la supervivencia de las plantas que crecen en …

Respuesta Fisiológica De Plantas De Cacao Al Déficit Hídrico Cuando Son Inoculadas Con Hfma, John Cristhian Fernández Lizarazo

Utopía - Working papers

El cacao (Teobroma cacao L.), es una especie hidromegaterma. El cambio climático puede acelerar los episodios de déficit hídrico en la agricultura. Adicionalmente para el cacao, la baja disponibilidad de zonas boscosas para el establecimiento inicial del cacao y la demanda mundial por este producto llevan a los cultivadores a sembrarlo en zonas marginales y de poca disponibilidad hídrica. Los hongos FMA permiten a las plantas hospederas establecerse y crecer más eficientemente aún en condiciones de diferentes estreses bióticos y abióticos, incluyendo el déficit hídrico. Por lo tanto la pregunta que pretendió resolver esta investigación es ¿Cuál es la respuesta …

Rural Movers Studies ... People Are Moving For Community Attributes And Jobs, Marilyn R. Schlake

Cornhusker Economics

University of Minnesota researchers conducted a Rural Movers Study to determine the motivations of people who moved within one to five years to rural Minnesota communities. Their findings are not unlike earlier research conducted at the University of Nebraska in 2008. The Rural Movers Study showed that 31 % of respondents moved due to a job or job offer. However, this was not one of the primary reasons individuals moved. For those individuals who did not move for employment, 76% wanted to find a good environment for raising their children, 67% moved to be closer to relatives, 64% looked for …

Genetic Variations Of Narcissus Tazetta And Selected Narcissus Cultivars Based On The Sequence Analysis Of Nrits And TrnL‑Is‑TrnF Regions, Seo Young Park, Mi Jin Jeon, Young Hee Joung, Keenan L. Amundsen, Gianluca Burchi, Angelo Porcelli, Mark S. Roh

Department of Agronomy and Horticulture: Faculty Publications

Narcissus tazetta var. chinensis (N. taz. var. chi.) accessions collected from the coastal areas of China, Korea, and Japan were compared with accessions of lower ranks of Narcissus tazetta (N. taz.) from Italy to study the genetic variations and with several morphologically similar cultivars available in the trade. Sequences of the internal transcribed spacer (ITS) regions of nuclear ribosomal DNA (nrITS) dendrogram and the chloroplast trnL-IS-trnF intergeneric spacer-gene (cpIS) were analyzed by maximum likelihood (ML) and posterior probability using STRUCTURE program. All single fower form of N. taz. var. chi. collected from China, Korea, and …

Adapting Network Theory For Spatial Network Externalities In Agriculture: A Case Study On Hemp Cross-Pollination, Jeffrey S. Young, Tanner J. Mccarty

Faculty & Staff Research and Creative Activity

Growers have increasingly expressed frustration over the negative externalities created by their neighbor's production practices. These spatial agricultural network problems include issues such as cross-pollination and herbicide drift. We develop novel methods for estimating parameters that allow us to adapt and apply general network diffusion models to these spatial agricultural network problems. Doing so allows us to calculate externality damage within a region and calculate cost-effective policies for alleviating that externality. We empirically illustrate, motivate, and test this approach by applying it to hemp. We find that network structure is an important factor in externality size and cost-effective policy response …

March 1st Filing Deadline, Tina N. Barrett

Cornhusker Economics

One of the many special tax provisions that has applied only to qualified farmers is the relief from estimated tax requirements. A qualified farmer, who is a calendar year taxpayer, can avoid the estimated tax payment penalty by either: 1) Filing an estimated tax payment by January 15th that is either 2/3 of your expected tax for the current year or 100% of last year's tax, whichever is less, or 2) Filing and paying 100% of the tax by March 1'1.

Drought Levels In Nevada Counties, 2022, Julianna Jovillar, Caitlin J. Saladino, William E. Brown Jr.

Environment

This fact sheet synthesizes data on drought levels within Nevada counties from the National Integrated Drought Information System (NIDIS) in 2022. The information presented in this document focuses on the breakdown of the number of Nevada residents affected by the droughts within each county and the drought experience in each county.

Ten Considerations For Solar-Powered Irrigation In Utah, Ngonidzashe Mufute, Matt Yost, Burdette Barker, Kalen Taylor, Mark Nelson, Randall Violett, Jody Gale

All Current Publications

This fact sheet outlines considerations for using solar-powered irrigation in Utah:

• Solar powered irrigation (SPI) is becoming more cost effective and practical to consider on the farm as the cost of alternative sources of energy are rising.
• Irrigators can now benefit from incentives such as tax credits to help offset costs.
• Investing in solar provides more independence from price fluctuations and energy shortages.
• Considerations for SPI systems include energy demand of the irrigation system, type and value of crops grown, available incentives and support, cost and accessibility of alternative energy sources, and multiple uses of the …

Poisson Hurdle Model-Based Method For Clustering Microbiome Features, Zhili Qiao, Elle Barnes, Susannah Tringe, Daniel P. Schachtman, Peng Liu

Department of Agronomy and Horticulture: Faculty Publications

Motivation: High-throughput sequencing technologies have greatly facilitated microbiome research and have generated a large volume of microbiome data with the potential to answer key questions regarding microbiome assembly, structure and function. Cluster analysis aims to group features that behave similarly across treatments, and such grouping helps to highlight the functional relationships among features and may provide biological insights into microbiome networks. However, clustering microbiome data are challenging due to the sparsity and high dimensionality.

Results: We propose a model-based clustering method based on Poisson hurdle models for sparse microbiome count data. We describe an expectation–maximization algorithm and a …

Deciphering The Genetic Architecture Of Key Female Floral Traits For Hybrid Wheat Seed Production, Juan Jimenez

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Wheat (Triticum aestivum L.) is a staple cereal that provides 20% of the calories and proteins in human intake (Ray et al., 2013). Global population is projected to increase to 9.7 billion by 2050. Food production must increase by 70% to feed this future population. Wheat production is in crisis due to political and environmental challenges and is projected to decline by 0.8% in 2022 (FAO, 2022). To ensure food security yield genetic gain must increase by around 1.4% annually. Taking advantage of heterosis, hybrid wheat has the potential to boost grain yield. However, hybrid wheat seed production systems …

The Invisible Meat Microcosmos - Investigations Of Processed Meats' Specific Spoilage Organisms, Rebecca Furbeck

Department of Animal Science: Dissertations, Theses, and Student Research

As humankind grows in population, so will our need to compete against bacterial populations which spoil foodstuffs before we are able to consume them. This dissertation aims to identify the bacterial communities responsible for meat spoilage, and the mechanisms that govern the behaviors of these organisms. The literature review summarizes the state of knowledge regarding factors that influence meat microbiome composition, and how analytical methods can influence research outcomes. Study 1 aimed to identify the impact of additional ingredients and processing steps on the microbial ecology of processed turkey products. The main specific spoilage organisms (SSOs) belonged to the orders …

Molecular Mechanisms Underlying Aberrant Circulating Steroid Hormones In Gnrhr-Ii Knockdown Boars And Their Control Littermates, Dorothy Elsken

Department of Animal Science: Dissertations, Theses, and Student Research

Swine are the only livestock species that produce a functional protein for both GnRH-II and its receptor (GnRHR-II). Our laboratory reported that the interaction between GnRH-II and GnRHR-II facilitates testosterone production, independent of LH stimulation. To further examine GnRHR-II function, we developed a swine line with 70% reduced GnRHR-II mRNA levels (GnRHR-II KD) compared to control littermates. Mass spectrometry analysis of serum revealed that circulating levels of gonadal steroids were reduced in mature transgenic vs. control boars. Paradoxically, evaluation of testicular tissue indicated no difference between lines for gonadal steroid hormone levels. To address a potential cause for this discrepancy, …

Variance Component Estimates For Growth Traits In Beef Cattle Using Selected Variants From Imputed Low-Pass Sequence Data, Chad A. Russell

Department of Animal Science: Dissertations, Theses, and Student Research

A beef cattle population (n=2,343) was used to assess the impact of variants identified from imputed low-pass sequence (LPS) on the estimation of variance components and genetic parameters of birth weight (BWT) and post weaning gain (PWG). Variants were selected based on functional impact and were partitioned into four groups (Low, Modifier, Moderate, High) based on predicted functional consequences and re-partitioned based on consequence of mutation, such as missense and untranslated region variants, into six groups (G1-G6). Each subset was used to construct a genomic relationship matrix (GRM) for univariate animal models. Multiple analyses were conducted to compare the proportion …

Environmental Determination Of Gastrointestinal Parasitism In Katahdin Sheep, Brian Arisman

Department of Animal Science: Dissertations, Theses, and Student Research

Gastrointestinal nematodes (GIN) negatively affect the performance and wellbeing of sheep and are difficult to control due to anthelmintic resistance. Producers are therefore choosing breeds naturally resistant to GIN infection, such as the Katahdin. Katahdin are raised in various climates and management systems in the U.S., and those environmental factors can be combined into eco-management clusters. We hypothesized that GIN challenge varies predictably based on the characteristics of these clusters. Katahdin producers from across the U.S. were surveyed for management information. Body weights (BW), fecal egg counts (FEC) and FAMACHA scores (FAM) were collected on 3,527 Katahdin lambs around 90 …

Increased Bundle-Sheath Leakiness Of Co2 During Photosynthetic Induction Shows A Lack Of Coordination Between The C4 And C3 Cycles, Yu Wang, Samantha S. Stutz, Carl J. Bernacchi, Ryan A. Boyd, Donald R. Ort, Stephen P. Long

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Use of a complete dynamic model of NADP-malic enzyme C4 photosynthesis indicated that, during transitions from dark or shade to high light, induction of the C4 pathway was more rapid than that of C3, resulting in a predicted transient increase in bundle-sheath CO2 leakiness (ϕ). Previously, ϕ has been measured at steady state; here we developed a new method, coupling a tunable diode laser absorption spectroscope with a gas-exchange system to track ϕ in sorghum and maize through the nonsteady-state condition of photosynthetic induction. In both species, ϕ showed a transient increase to > 0.35 before declining to a steady state …

2022 Wics Conference. Water And Integrated Cropping Systems: Driving Research, Teaching, And Extension Impact --Slide Presentation

WICS Conferences

What conference attendees had to say:

"The teaching overview and panel discussion provided many insights on how education pathways are evolving and the need to create diverse opportunities to meet dynamic needs."

"The extension component was valuable in seeing how those doing research can collaborate with and assist extension educators to make a greater impact in the state."

"It was good to learn what relevant research is being conducted and also the work being done in teaching in regards to water and cropping systems."

It was a great first WICS Conference. The discussions have only just begun.

Oak Savanna Restoration And Climate Change Mitigation Through Silvopasture In Minnesota, James Siems

Environmental Studies Student Work

Reducing emissions of world food systems will be critical to combatting climate change. Silvopasture systems, which integrate managed forests with pastureland, have been shown to be a more sustainable alternative to traditional livestock production and have the ancillary benefit of diversifying the sources of income for farmers. Silvopasture may also have the capacity to serve as a mechanism for ecological restoration. This paper combines existing literature with an interview of a farmer who is engaging in silvopasture to evaluate the potential of silvopasture as means to restore Minnesota’s disappearing oak savanna ecosystem, while improving the sustainability of food production within …