Life Sciences Commons^™

Field Study To Identify The Composition Of Plant Vegetation In Wadi Al- Ain - Hadramout – Yemen, Murad Mohammed Kanji, Mohammed Saeed Bn Qadim, Alawiya Abdullah Al Awad, Abdulkarim Saber Ali

Hadhramout University Journal of Natural & Applied Sciences

This study was conducted during the period of April 2016 - December 2017 to determine the plant vegetation of Wadi Al-Ain. The results of the field survey identified a total of 86 plant species 37 families and 77 genera, including 58 wild plant species grown naturally. The total number of cultivated plants was 26 plant species, but only two plant species are grown as both wild and cultivated species. The number of plant species that appeared as an ecological form of shrubs reached 34 plant species, while the number of plant species that appeared ecologically in the form of herbs …

The Effect Of Flaveria Trinervia Plant Extract On Germination And Growth Of Onion Seeds (Allium Cepa L), Mahrous Abdullah Bahoirth, Yaser Saeed Bahurmuz

Hadhramout University Journal of Natural & Applied Sciences

This part of the study applied in the laboratory experiment to know the effect of water extracts of the vegetation and rootlet of the Flaveria trinervia in the four levels (0,10,20,30%) on germination and growth onion seeds. These crop was added 10 seeds in a petri dish, and 5 mL of the extract was added, with four replicates per treatment. After two weeks, the measurements were taken on the studied traits (germination ratio, speed, length of the plumule, the rootlet, the soft and dry weight of the plumule and the rootlet). The results showed that the effect of the rootlet …

Survey On Red Palm Weevil (Rhynchophorus Ferrugineusolivier, Coleoptera, Curculionidae)On Date Palm In Some Infected Areas In Wadi Hadhramout, Mohamed Othman Al-Amodi, Ahmed Mbruk Baekabah, Saleh Ryes Alsaqir, Mohamed Mbruk Easukul, Saleh Salem Dahlus

Hadhramout University Journal of Natural & Applied Sciences

A Comprehensive survey study of Red palm weevil (Rhynchophorus ferrugineus) (RPW) was conducted during the year 2017 in seven villages of Seiyun, Shibam and Al-Qateen Districts in Wadi Hadhramout. A 4477 palmswere surveyed of these trees 322 palms (4.27%) were found infested by Red palmweevil. The results showed a level of old infestation between 25 – 34% and a level of new infestation between 31 – 37%. The pest incidence was also differenced according to date varieties different among date varieties different. Eighteen investigated date palm varieties showed different response towards infestation by RPW. Sabiahsafra and Khalas were highly affected …

Rehabilitation Of Rangeland And The Possibility Of Productivity Improvement In Wadi Al-Khun (Hadhramout), Ahmed Salem Bataher

Hadhramout University Journal of Natural & Applied Sciences

One hectare of the area in Wadi Al-khun has been fenced and plant inventory in the fenced area (Enclosure) was conducted. The enumerations in the fenced area are showed increase in numbers of perennial species such as Merremia hadramautica, Tephrosia nubica and Acacia tortilis while annual or seasonal species as Cenchrus ciliaris, Stipagrostes hirtigluma, Tribulus sp, Dichanthium insculptum .etc, were decreased or disappeared after a few months of the rainy season. Natural regeneration of perennial range species have been increased in their density in particular Merremia hadramautica, Tephrosia nubica. The dry matter of fodder production was 408 kg /ha and …

The Effect Of Concentration Of Mannitol Solution On The Germination And Growth Of Three Cultivars Of Sorghum Bicolor L, Ghassan Abdulwahid Obad, Mahroos Abedalla Bahwirth

Hadhramout University Journal of Natural & Applied Sciences

A laboratory experiment was conducted in the Department of Biology, Faculty of Education (Saber) – Aden University, to evaluate the effect of Five different concentrations of mannitol solution (i,e., control, 0.5%, 1.0%, 1.5% and 2.0%) on germination and growth of three cultivars of Sorghum bicolor L. i.e., "HAIQ", "BAINI" and "SAIF". The results showed significant differences between the three cultivars for all studied parameters except for the root dry weight mg./seedling. The cultivar "HAIQ" was the most tolerant one, then the cultivar "SAIF", whereas the cultivar "BAINI" was the least tolerant one (95%, 92.1% and 89.4%, respectively). The cultivar "HAIQ" …

A Survey Of Weeds Present In Al- Qatten Diroctorate Farms Hadhramout Governorate, Yaser Saeed Bahurmuz, Ahmed Subait Bamosa, Abdulgader Ali Hassan

Hadhramout University Journal of Natural & Applied Sciences

An exclusive study of weeds present in Alqatten Directorate farms, was carried out this study aimed to identify types and number of weeds in the farms. The study area included (20) Farms in five different regions. 39 plant species belonging to 20 plant Family have been identified. Grassy famil was the most present with 7 species. the most wide spread grass was, Cynodon dactylon and Setaria verticillata; as they were found in all studied farms. While Withania somnifera and Rhazya stricta, were less prevalent, as they were present in two farms only.The study reveals that there is defference in the …

Hyperseed: An End-To-End Method To Process Hyperspectral Images Of Seeds, Tian Gao, Anil Kumar Nalini Chandran, Puneet Paul, Harkamal Walia, Hongfeng Yu

School of Computing: Faculty Publications

High-throughput, nondestructive, and precise measurement of seeds is critical for the evaluation of seed quality and the improvement of agricultural productions. To this end, we have developed a novel end-to-end platform named HyperSeed to provide hyperspectral information for seeds. As a test case, the hyperspectral images of rice seeds are obtained from a high-performance line-scan image spectrograph covering the spectral range from 600 to 1700 nm. The acquired images are processed via a graphical user interface (GUI)-based open-source software for background removal and seed segmentation. The output is generated in the form of a hyperspectral cube and curve for each …

Enhancing Therapeutic Approaches For Melanoma Patients Targeting Epigenetic Modifiers., Maria Gracia-Hernandez, Zuleima Munoz, Alejandro Villagra

Biochemistry and Molecular Medicine Faculty Publications

Melanoma is the least common but deadliest type of skin cancer. Melanomagenesis is driven by a series of mutations and epigenetic alterations in oncogenes and tumor suppressor genes that allow melanomas to grow, evolve, and metastasize. Epigenetic alterations can also lead to immune evasion and development of resistance to therapies. Although the standard of care for melanoma patients includes surgery, targeted therapies, and immune checkpoint blockade, other therapeutic approaches like radiation therapy, chemotherapy, and immune cell-based therapies are used for patients with advanced disease or unresponsive to the conventional first-line therapies. Targeted therapies such as the use of BRAF and …

Age And Not The Preferred Limb Influences The Kinematic Structure Of Pointing Movements, Kurt W. Kornatz, Brach Poston, George E. Stelmach

Kinesiology and Nutrition Sciences Faculty Research

In goal-directed movements, effective open-loop control reduces the need for feedback-based corrective submovements. The purpose of this study was to determine the influence of hand preference and aging on submovements during single-and two-joint pointing movements. A total of 12 young and 12 older right-handed participants performed pointing movements that involved either elbow extension or a combination of elbow extension and horizontal shoulder flexion with their right and left arms to a target. Kinematics were used to separate the movements into their primary and secondary submovements. The older adults exhibited slower movements, used secondary submovements more often, and produced relatively shorter …

Identifying Sinorhizobium Meliloti Genes That Determine Fitness Outcomes, Alexander B. Benedict

Theses and Dissertations

The remarkable metabolic capacity of the soil-dwelling bacterium Sinorhizobium meliloti is encoded on its three circular replicons: the chromosome and two large megaplasmids, pSymA and pSymB. Despite making up 45% of the genome, the pSymA and pSymB megaplasmids can be cured from S. meliloti. This unique attribute provides an opportunity to study the essentiality of chromosomal genes in the presence or absence of nearly half the genome. By interrogating chromosomal genes via massively parallel transposon insertion sequencing (Tn-seq) in the presence and absence of pSymA and pSymB, we identified 307 genes as being essential for viability regardless of the genomic …

Mistakes In Difficult Conversations, Allan Vyhnalek

Cornhusker Economics

Farm families that work together across the family tree and across generations seem to encounter difficulty from time to time when separating “family” from “business.” Having clear, consistent, and honest communications will go a long way towards reducing the troubles that can arise in difficult conversations. This article addresses those troubles.

Saprotrophy Among Endophytic Fungi, Emily Marissa Weatherhead

Theses and Dissertations

Endophytic fungi have been found in every terrestrial plant investigated thus far. They can receive nutritional benefits from their host tissues. Two major modes of nutrition for endophytic fungi include biotrophy and saprotrophy. In chapter 1, I set out to determine whether endophytic fungi isolated from Quercus gambelii in Utah, USA were capable of saprotrophy and, if some were, how much variation in saprotrophic ability exists among them. Because saprotrophy requires moisture and, in Utah, moisture is largely unavailable outside winter and early spring, in chapter 2 I set out to determine if any of our isolated endophytic fungi were …

Human Skin Triglycerides Prevent Bed Bug (Cimex Lectularius L.) Arrestment, Sudip Gaire, Zachary C. Devries, Russell Mick, Richard G. Santangelo, Grazia Bottillo, Emanuela Camera, Coby Schal

Entomology Faculty Publications

Bed bugs (Cimex lectularius) have proliferated globally and have become one of the most challenging pests to control indoors. They are nocturnal and use multiple sensory cues to detect and orient towards their human hosts. After feeding, usually on a sleeping human, they return to a shelter on or around the sleeping surface, but not directly on the host. We hypothesized that although human skin odors attract hungry bed bugs, human skin compounds may also prevent arrestment on hosts. We used arrestment assays to test human skin swabs, extracts from human skin swabs, and pure compounds identified from …

Closely Related Gull Species Show Contrasting Foraging Strategies In An Urban Environment, K. A. Lato, D. J. Madigan, R. R. Veit, L. H. Thorne

Publications and Research

The expansion of urban landscapes has both negative and positive effects on wildlife. Understanding how different species respond to urbanization is key to assessing how urban landscapes influence regional wildlife behavior and ecosystem structure. Gulls are often described as strong urban adapters, but few studies have explored species-specific differences in habitat use. Here, we use GPS tracking in conjunction with stable isotope analysis (SIA) to quantify the habitat use and trophic ecology of great black-backed gulls (Larus marinus) and herring gulls (L. argentatus) in an urbanized area. Non-Metric Multidimensional Scaling (NMDS) of foraging locations revealed significant differences in the habitat …

Limited Range-Filling Among Endemic Forest Herbs Of Eastern North America And Its Implications For Conservation With Climate Change, Stephanie K. Erlandson, Jesse Bellemare, David A. Moeller

Biological Sciences: Faculty Publications

Biodiversity hotspots host a high diversity of narrowly distributed endemic species, which are increasingly threatened by climate change. In eastern North America, the highest concentration of plant diversity and endemism occurs in the Southern Appalachian Mountains (SAM). It has been hypothesized that this region served as a refugium during Pleistocene glacial cycles and that postglacial migration northward was dispersal limited. We tested this hypothesis using species distribution models for eight forest herb species. We also quantified the extent to which the geography of suitable habitat shifted away from the current range with climate change. We developed species distribution models for …

Ecological And Morphological Differentiation Among Coi Haplotype Groups In The Plant Parasitic Nematode Species Mesocriconema Xenoplax, Julianne N. Matczyszyn, Timothy Harris, Kirsten S. Powers, Sydney E. Everhart, Thomas O. Powers

Department of Plant Pathology: Faculty Publications

DNA barcoding with the mitochondrial COI gene reveals distinct haplotype subgroups within the monophyletic and parthenogenetic nematode species, Mesocriconema xenoplax. Biological attributes of these haplotype groups (HG) have not been explored. An analysis of M. xenoplax from 40 North American sites representing both native plant communities and agroecosystems was conducted to identify possible subgroup associations with ecological, physiological, or geographic factors. A dataset of 132 M. xenoplax specimens was used to generate sequences of a 712 bp region of the cytochrome oxidase subunit I gene. Maximum-likelihood and Bayesian phylogenies recognized seven COI HG (≥99/0.99 posterior probability/bootstrap value). Species delimitation …

Ecological And Morphological Differentiation Among Coi Haplotype Groups In The Plant Parasitic Nematode Species Mesocriconema Xenoplax, Julianne N. Matczyszyn, Timothy Harris, Kirsten S. Powers, Sydney E. Everhart, Tom Powers

Department of Plant Pathology: Faculty Publications

DNA barcoding with the mitochondrial COI gene reveals distinct haplotype subgroups within the monophyletic and parthenogenetic nematode species, Mesocriconema xenoplax. Biological attributes of these haplotype groups (HG) have not been explored. An analysis of M. xenoplax from 40 North American sites representing both native plant communities and agroecosystems was conducted to identify possible subgroup associations with ecological, physiological, or geographic factors. A dataset of 132 M. xenoplax specimens was used to generate sequences of a 712 bp region of the cytochrome oxidase subunit I gene. Maximum-likelihood and Bayesian phylogenies recognized seven COI HG (≥99/0.99 posterior probability/bootstrap value). Species …

Intake Estimation Of Rams Under Grazing Condition In A Deferred Pastures Of Panicum Coloratum By Two Techniques, C. M. Ferri, M. A. Brizuela, N. P. Stritzler, H. J. Petruzzi

IGC Proceedings (1977-2023)

The goal of this study was to quantify the organic matter intake (OMI) of Pampinta rams grazing in a Panicum coloratum cv Verde differed pasture. The OMI was compared by two methods: a) the difference between the forage measured in pre and post-grazing condition, and b) the faecal production:digestibility ratio of the diet, estimated by total faecal gathering, and from the quantity of total faecal N in g per 100 g^-1 of OMI and the concentration of total faecal N, respectively. The OMI estimated by difference between the forage measured in pre and post-grazing was 9 % higher (P …

Estimation Of Organic Matter Digestibility And Intake From Faecal Organic Matter And Daily N Excretion And Concentration, C. M. Ferri, N. P. Stritzler, M. A. Brizuela

IGC Proceedings (1977-2023)

This study was performed with grazing sheep, to establish: a) if the amount of total faecal N (C; in g 100g^-1 of organic matter intake (OMI)) remains constant at three feeding levels, in four utilisation periods of deferred Panicum coloratum cv. Verde; b) the relationship between C and faecal N fractions, and c) the relationship between faecal daily excretion of OM and N, and OMI. Intake increased (P< 0.01) with utilisation period, and was related (r = - 0.82; P< 0.01) to the protein content of food, the insoluble N fraction (r = -0.49; P< 0.01) and the soluble:insoluble N ratio (r = 0.41; P< 0.01) in faeces. No relation with total N concentration (r = -0.22; P> 0.05) or soluble N fraction (r = -0.02; P> 0.05) in faeces could be found. Daily excretion of OM and N were positively related (R² = 0.93 and 0.96, respectively; …

Effects Of Fertilization And Legume Introduction On The Forage Production Of Brachiaria Decumbens Pastures, M. R. Correa, Tsutomu Kanno, Manuel C. M. Macedo, J. D. G. Santos Junior, L. G. Beretta

IGC Proceedings (1977-2023)

A grazing experiment was conducted to examine the effects of P and K fertilization and legume introduction on the forage production of Brachiaria decumbens (BD) pastures. Amount of biomass, dry matter production and forage quality were evaluated on BD pastures where three treatments were applied: without maintenance fertilizer (BD-N), with maintenance fertilizer (BD-F), and BD and Stylosanthes guianensis cv. Mineirao (SG) mixture with maintenance fertilizer (BD-FL). The fertilizer application increased an annual average of biomass and the contents of P and K in the leaves. On the other hand, the legume introduction had a positive influence on crude protein and …

Alterations In Glycemic Variability, Vascular Health, And Oxidative Stress Following A 12-Week Aerobic Exercise Intervention-A Pilot Study, Joshua R. Sparks, Mark A. Sarzynski, J. Mark Davis, Peter W. Grandjean, Xuewen Wang

International Journal of Exercise Science

International Journal of Exercise Science 14(3): 1334-1353, 2021. The state of being overweight or obese leads to an increased risk of development of cardiometabolic disease. Increases in glycemic variability have been associated with greater induction of oxidative stress and declined vascular health, which may be exacerbated by higher weight status and improved through exercise. The purpose of this study was to examine the impact of a twelve-week aerobic exercise intervention on continuous glucose monitor (CGM) assessed glucose concentrations and glycemic variability, and biomarkers of vascular health and oxidative stress in overweight or obese adults. Eight adults (Age = 48.9 ± …

Acute Changes In Arterial Function Post High-Intensity Lower Extremity Cycling, Alyssa Weatherholt, William R. Vanwye, Jeffery L. Short, Alyssa A. Andreis, Guoyuan Huang

International Journal of Exercise Science

International Journal of Exercise Science 14(2): 1363-1374, 2021. The purpose of this study was to assess the acute arterial blood flow velocity of the lower extremity (LE) immediately after a bout of high-intensity LE cycling exercise. Twenty-eight healthy males (n = 14) and females (n = 14) aged 20.9 ± 1.7 years participated in this study. All subjects performed a single bout of high-intensity cycling (70% of HRR) for 45 min. The subjects' LE blood flow velocity, heart rate (HR), systolic blood pressure (SBP), and oxygen saturation (SpO₂) were measured at rest, immediately post-, post-15 min., …

Remote Ischemic Preconditioning Does Not Improve The Six Minutes Walk Test Performance In Chronic Heart Failure Patients: A Randomised Pilot Trial, Sarah-Maude Martin, Francois Lalonde, Elise Legault, Paula Ribeiro, Alain Steve Comtois, François Tournoux

International Journal of Exercise Science

International Journal of Exercise Science 14(2): 1354-1362, 2021. Cycles of ischemia and reperfusion induced with a pressure cuff on a skeletal muscle, also know as remote ischemic preconditioning (RIPC), appears to improve performance in different time-trial events in healthy individuals. Our primary goal was to assess the effect of RIPC in heart failure (HF) patients’ functional capacity using the six-minute walk test (6MWT). A randomized crossover design comparing RIPC (4 x five-minutes of upper arm ischemia) to the SHAM procedure was done in 15 patients prior to a 6MWT. The primary outcome measure was the total distance walked in a …

Ketone Body Metabolism In The Ischemic Heart, Stephen C. Kolwicz Jr.

Health Sciences Faculty Publications

Ketone bodies have been identified as an important, alternative fuel source in heart failure. In addition, the use of ketone bodies as a fuel source has been suggested to be a potential ergogenic aid for endurance exercise performance. These findings have certainly renewed interest in the use of ketogenic diets and exogenous supplementation in an effort to improve overall health and disease. However, given the prevalence of ischemic heart disease and myocardial infarctions, these strategies may not be ideal for individuals with coronary artery disease. Although research studies have clearly defined changes in fatty acid and glucose metabolism during ischemia …

Annotated Checklist Of The Bryophytes Observed At The Gordon Natural Area West Chester University, Pa) 2007-2021. Version Ii, Nur Ritter, Noah Long

Gordon Natural Area Baseline Plant Survey Documents

Summary: Data Number of Taxa: 38 Species, in 31 Genera, 24 Families, and 13 Orders.

Description: The bryophytes are an informal group that is composed of three divisions of non-vascular plants: the liverworts, hornworts, and mosses. Of these, the mosses are the most familiar to most people, but the three groups are similar in appearance, and differ only in their reproductive structures. All bryophytes lack specialized tissues for transporting resources (i.e., vascular tissue); hence, they are characteristically small in stature. Additionally, bryophytes do not produce flowers or seeds; rather, reproduction is through spores. Bryophytes have received relatively little investigation at …

Scorpionfish (Scorpaena Porcus) Neurocranium, Erin Porter, Cairone Reft, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium preparation of a Scorpionfish (Scorpaena porcus) by Erin Porter and Cairone Reft for the Biology of Fishes course at Nova Southeastern University taught by Dr. Kerstetter.

Annotated Checklist Of Invertebrate Species Observed At The Gordon Natural Area (West Chester University, Pa) 2007-2021. Version Iii, Nur Ritter

Gordon Natural Area Biodiversity Studies Documents

Description: As with some of the other biotic groups, the research pattern for invertebrates at the GNA might best be described as ‘intermittent.’ Former WCU professor Win Fairchild and his students conducted research on aquatic invertebrates in Plum Run, both inside and outside of the boundaries of the GNA. To date, the only data from that work that we’ve been able to obtain are from the 2007 MS thesis of Danielle DiFederico.

Since that time, the only ‘directed’ invertebrate research at the GNA has been the annual monitoring in Plum Run by the Stroud Water Research Center (SWRC). This research …

Gut Microbiota Composition And Predicted Microbial Metabolic Pathways Of Obesity Prone And Obesity Resistant Outbred Sprague-Dawley Cd Rats May Account For Differences In Their Phenotype, Diana N. Obanda, Michael J. Keenan, Ryan Page, Anne M. Raggio, Christopher Taylor, Brian D. Marx, Rhett W. Stout, Justin Guice, Meng Luo, David A. Welsh, Diana Coulon, Claudia Husseneder

School of Graduate Studies Faculty Publications

Like humans, outbred Sprague-Dawley CD rats exhibit a polygenic pattern of inheritance of the obese phenotype and not all individuals exposed to a high calorie intake develop obesity. We hypothesized that differences in gut microbiota composition account for phenotype differences between obese prone (OP) and obese resistant (OR) rats. We studied the gut microbiota composition of OPand OR rats after a high fat (HF) diet and how they respond to fermentation of resistant starch (RS). In phase 1 of the study 28 OP and 28 OR rats were fed a HF diet. In order to determine causal role of microbiota …

Evidence Of Western Corn Rootworm (Diabrotica Virgifera Virgifera Leconte) Field-Evolved Resistance To Cry3bb1 + Cry34/ 35ab1 Maize In Nebraska, Jordan D. Reinders, Emily E. Reinders, Emily Robinson, Bryan W. French, Lance J. Meinke

Department of Entomology: Faculty Publications

BACKGROUND: Western corn rootworm (WCR; Diabrotica virgifera virgifera) field-evolved resistance to transgenic maize expressing the Cry3Bb1 protein derived from Bacillus thuringiensis (Bt) has been confirmed across the United States Corn Belt. Although use of pyramided hybrids expressing Cry3Bb1 + Cry34/35Ab1 has increased in recent years to mitigate existing WCR Bt resistance, susceptibility of Nebraska WCR populations to this rootworm–Bt pyramid has not been assessed. Plant-based bioassays were used to characterize the susceptibility of WCR populations to Cry3Bb1 and Cry3Bb1 + Cry34/35Ab1 maize. Populations were collected from areas of northeastern Nebraska with a history of planting Bt maize that expressed …

Validation Of Reference Genes For Quantitative Pcr In The Forest Pest, Ips Calligraphus, Mary Wallace, Lynne K. Rieske

Entomology Faculty Publications

The six-spined ips, Ips calligraphus, is a North American bark beetle that can exploit most eastern North American Pinus species and can cause mortality. Biotic and abiotic disturbances weaken trees, creating breeding substrate that promotes rapid population growth. Management historically relied on silvicultural practices, but as forests become increasingly stressed, innovative management is needed. Manipulation of the cellular RNA interference (RNAi) pathway to induce gene silencing is an emerging means of insect suppression, and is effective for some bark beetles. Quantitative PCR (qPCR) is a powerful tool for analysis of gene expression, and is essential for examining RNAi. To …