Life Sciences Commons^™

Response To Management Strategies In Young-Growth Giant Sequoia Stands At Mountain Home Demonstration State Forest – Remeasurement Twenty Years After Treatment, Joshua Soderlund

Master's Theses

There is limited information on how young-growth giant sequoia (Sequoiadendron giganteum [Lindl.] Buchholz)/mixed conifer stands respond to forest management strategies. An applied research study was initiated in 1989 when 35 approximately 0.1 acre (0.04 hectare) plots were installed in six young-growth giant sequoia/mixed conifer stands. The objective of this study was to determine if there was a difference after 20 years between treatments (a) thin only, (b) thin and prescribe burn, and (c) control in terms of the effect on overstory growth and yield, understory plants, tree regeneration and downed woody debris. Analysis of variance (ANOVA) for cubic-foot growth …

The Influence Of Chilling And Heat Accumulation On Bloom Timing, Bloom Length And Crop Yield In Almonds (Prunus Dulcis (Mill.)), Melanie M. Covert

Master's Theses

Almonds are one of the first commercial nut trees to bloom in early spring and thus are susceptible to temperature patterns prior to and during bloom which affect bloom timing, bloom length, pollination and nut set. Data used in this project include yearly dates of 90% bloom from 1996-2006, bloom length in days and final crop yields in pounds per tree for Nonpareil and Mission varieties. Data were collected from the University of California Cooperative Extension reports on the 1993-2006 Regional Almond Variety Trials in Butte, San Joaquin and Kern Counties. Temperature pattern models in the form of Chill Hours …

Investigating The Roles Of Ndj1 And Tid1 In Crossover Assurance In Saccharomyces Cerevisiae, Rianna Knowles

Master's Theses

Meiosis is the specialized process of cell division utilized during gametogenesis in all sexually reproducing eukaryotes, which consists of one round of DNA replication followed by two rounds of chromosome segregation and results in four haploid cells. Crossovers between homologous chromosomes promote proper alignment and segregation of chromosomes during meiosis.

Crossover interference is a genetic phenomenon in which crossovers are non-randomly placed along chromosomes. Crossover assurance ensures that every homologous chromosome pair obtains at least one crossover during Prophase I. Crossovers physically connect homologous pairs, allowing spindle fibers to attach and separate homologs properly. However, some organisms have shown an …

The Efficacy Of Antibiotic Residue Screening Tests For The Detection Of Natural Antimicrobials In Milk, Stacey L. O'Donnell

Master's Theses

No abstract provided.

Classifying And Mapping Diversity In A Species-Poor System: The Mangrove Meta-Community Of Laguna Chacahua National Park, Oaxaca, Mexico, Elizabeth Kay Weisgerber

Master's Theses

ABSTRACT

Classifying and Mapping Diversity in a Species-Poor System: the mangrove meta-community of Laguna Chacahua National Park, Oaxaca, Mexico

by

Elizabeth Kay Weisgerber

Both field transects and imagery grid plots were analyzed with the goal of creating a community classification map for the mangrove forest of Parque Nacional Lagunas de Chacahua. In total, data was collected in 49 sites throughout the park, recording measures such as DBH, basal area, estimated dominance, frequency, cover and relative dominance. Field locations were marked and georeferenced with a GPS and grid plots overlaid on satellite imagery of the park were generated via a random …

Effect Of Prostaglandin E2 On Mechanical Stresses Applied By Mc3t3-E1 Osteoblast-Like Cells On A Soft Hydrogel Substrate, Abhijit Deb Roy

Master's Theses

Osteoblasts are sensitive to mechanical stimuli and release Prostaglandin E2 (PGE2) when exposed to a fluid shear stress. The exact mechanism by which these cells sense mechanical stress is not well established. A study of the stresses applied by the osteoblasts, under the influence of PGE2, on a hydrogel provided information regarding intercellular-communication via changes in the substrate surface pattern.

A digital image correlation program was developed using the Levenberg-Marquardt optimization algorithm to analyze images and compare the deformations between pairs of images. Comparisons of images before and after the addition of PE2 to the media showed differences in the …

Automation Of Orthodontic Wire Tester For Performing Three Point Bending Tests, Adithya Venkatesan

Master's Theses

Abstract

Understanding the biomechanical factors in orthodontics is important in order to improve the overall effectiveness of actual clinical treatment. An accurate method to study the threedimensional (3D) force systems and the resulting movements of teeth during orthodontic treatment is needed along with the understanding of the material properties of any orthodontic wire. Until recently, most of the orthodontic biomechanics literature was limited to twodimensional experimental studies. Recent advances in threedimensional computer modeling have also been developed but have been limited to the manual control of tooth movement. Overall, there is very little published evidence in the literature on the …

Aronia Mitschurinii: Solving A Horticultural Enigma, Peter J. Leonard

Master's Theses

Aronia (Medik.), commonly known as chokeberry, is a taxonomically misunderstood genus currently experiencing a renaissance in North America as both an ornamental and fruit crop. Three species of chokeberry are commonly accepted as native in North America: A. arbutifolia (L.) Pers. red chokeberry; A. melanocarpa (Michx.) Elliot, black chokeberry; and A. prunifolia (Marshall) Rehder, or purple chokeberry. In Europe a fourth species of human origin is recognized as Aronia mitschurinii (A.K.Skvortsov & Maitul.), or cultivated, black-fruited Aronia. It is widely speculated that this genotype originated in the early 20^th century with Russian pomologist Ivan Michurin, as the product …

The Influence Of Resistance Training On Primary Hemostatic Responses, Brent C. Creighton

Master's Theses

Objective: The rise in casualties of acute cardio vascular disease has increased the investigation of potential ways to combat these problems. Long term resistance training has been viewed as one possible approach in helping to reduce the hyperaggragability of platelets following acute strenuous exercise. The present investigation was designed to explore the effects of an acute resistance exercise test (AERET) and recovery on the primary hemostatic system in both resistance trained and untrained individuals.Methods: Ten resistance trained (RT) (Age, 26.0 ± 1.42 yr; Height, 175.12 ± 2.7 cm; Weight, 79.56 ± 4.29 kg) and ten untrained individuals UT (Age, …

The Expression Of T-Box (Tbx3) In The Bovine Mammary Gland, Maria L. Procopio Ms.

Master's Theses

Development of the bovine mammary gland is a complex process that is regulated by several hormones, growth factors and transcription factors including but not limited to growth hormone (GH), insulin-like growth factor (IGF)-I and T-box (Tbx)2 and 3. Tbx2 and Tbx3 are transcription factors required for mammary gland development in humans and known to regulate cell cycle. In addition, there is recent evidence that GH increases expression of Tbx3 in osteoblasts independent of IGF-I. Based on these findings, we hypothesized GH and IGF-I will increase Tbx2 and Tbx3 expression in bovine mammary epithelial cells (MEC), the cell responsible for milk …

Influence Of Vineyard Floor Management Practices On Soil Aggregate Stability, Total Soil Carbon And Grapevine Yield, Kimberly Ellen Adams

Master's Theses

Soil aggregates provide pore spaces of various sizes supplying water, gases and nutrients to plant roots and microorganisms, and facilitate moisture retention and availability. Soil aggregate stability is indicative of soil biological and structural health, and is increased by soil carbon derived from plant roots and the soil microbial biomass. Aggregate stability and soil carbon can be enhanced by increasing organic matter through compost additions or by planting cover crops. Additionally, aggregate stability is enhanced by arbuscular mycorrhizal fungi (AMF) that form a symbiotic association with plant roots, and consolidate soil particles into aggregates through hyphal networks and through the …

Ornamentation, Behavior, And Maternal Effects In The Female Northern Cardinal, Caitlin Winters

Master's Theses

This study seeks to understand the relationship between ornamentation, maternal effects, and behavior in the female Northern Cardinal (Cardinalis cardinalis). Female birds possess ornaments that indicate a number of important known aspects of quality and are usually costly to maintain. However, the extent to which female specific traits, such as maternal effects, are indicated is less clear. It is predicted by the Good Parent Hypothesis that this information should be displayed through intraspecific signal communication. Specifically, androgens and carotenoids are of interest in this study because both are linked to ornamentation, and are also important egg components that …

Feeding Selectivity And Habitat Usage Of Esox Americanus, Scott Richard Clark

Master's Theses

Patterns of piscine prey selection and habitat usage of Esox americanus were assessed through a series of field and experimental studies. Although few detailed studies exist on the foraging behavior and habitat usage of E. americanus, throughout its range it may be an important trophic component in maintaining fish assemblage structure in many lower order streams. Across 17 sampled streams, the presence of E. americanus among reaches within streams was found to be strongly correlated with increasing levels of habitat complexity. Reaches occupied by E. americanus featured increased amounts of in-stream physical structure, increased variability in stream width and …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

Temporal And Spatial Variability Of Phytoplankton Biomass In Coastal Mississippi Waters, Lorin Matthew Dornback

Master's Theses

Chlorophyll concentrations were measured in western Mississippi coastal waters to determine the spatial and temporal variability of phytoplankton. Nutrients (nitrate, silicate, phosphate), river discharge, temperature, salinity, stratification, tides, currents and winds were measured in concert with the phytoplankton concentrations. The purpose of this study was to determine the seasonal variability in phytoplankton and what was driving the variability. This study was comprised of a three year (September 2007-November 2010) time series where samples were taken once a month for eight stations. Profiles of each station were taken using a Conductivity, Temperature and Depth (CTD) sensor and a WET Labs FL-3 …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

An Analytical Study Of Air-Sea Co2 Gas Exchange In The Northwest Mississippi Bight Region, Andrea Kathryn Braatz

Master's Theses

With the continued increase of carbon dioxide (CO2) emissions, researchers are concerned with accumulation of excess CO2 within the atmosphere. The ocean is an important sink for the drawdown of atmospheric CO2 concentrations. Due to high spatial and temporal variability, CO2 fluxes in the coastal ocean are not as well characterized as those for the open ocean. More specifically, data for the northern Gulf of Mexico (GOM) coastal region is lacking. A time series analysis of air-sea CO2 flux rates from May through December 2009 was conducted using data collected by The University of Southern Mississippi’s Central Gulf Ocean Observing …

A Formative Evaluation For A Food Choices Intervention In A Mississippi Delta Community: A Focus Group Of Rural African American Adolescents, Jovan Chantrell Eugene Williams

Master's Theses

A needs assessment should be conducted to plan effective interventions. This study used a qualitative research approach to examine the eating patterns, food purchasing and preparation skills and practices, barriers and facilitators of dietary change, social and contextual influences on food choices, and preferences for communication and presentation channels and styles of low-income rural African American adolescents. Seven focus groups were conducted with a total of 33 participants, 21 girls and 12 boys, aged 13-18. Adolescents were grouped by age and gender. A moderator, who was trained in focus group methodology, conducted the session using a focus group discussion guide …

Diet And Feeding-Related Morphometrics Of The Blackstripe Topminnow, Fundulus Notatus, In Allotropic And Syntopic Populations With The Blackspotted Topminnow, Fundulus Olivaceus, Charles Michael Champagne

Master's Theses

The Fundulus notatus species complex consists of three described species: F. notatus, F. olivaceus and F. euryzonus. Both F. notatus and F. olivaceus have broad overlapping ranges with many populations being found within and outside of contact zones. Contact zones are generally found in midreaches with F. olivaceus dominating headwaters and F. notatus in larger rivers downstream. Both species share similar ecological niches so the mechanism allowing for stable coexistence in contact zones is unknown. The purpose of this study was to examine variability in diet and feeding morphology of F. notatus in syntopic and allotopic populations across …

An Exploratory Biomechanical Analysis Of The Side-To-Side Swing Patterns Of Three Skilled Switch Hitters, Francesca Marie Castellucci

Master's Theses

The ability to successfully switch hit, or hit a baseball from both sides of the plate, requires a great amount of practice and coordination bilaterally. This study used three-dimensional kinematic and kinetic data to examine the swing patterns of skilled switch hitters in baseball. Three male minor league and division I collegiate switch hitters participated. Subjects stood on force plates and hit baseballs off a tee while their swings were recorded with a three-dimensional optical motion capture system. Each subject performed twenty total swings, ten from the right and ten from the left. The swings were digitally analyzed and the …

Effects Of Chainring Design On Performance In Competitive Cyclists, Christiane Rose O'Hara

Master's Theses

The development of noncircular chainrings to improve cycling performance has been in progress since the 1980’s and continues apace. The aim of this study was to compare performance time and physiological responses in cycling using a standard circular chainring versus a noncircular chainring developed in 2005: the Rotor Q-Ring. Eight competitive male cyclists were pre-tested using the original circular chainrings and also on the initial week of testing. The intervention consisted of cycling with Rotor Q-Rings for four weeks. Post-testing occurred with the original chainrings for the final week of testing. Testing consisted of a maximal or submaximal graded exercise …

Effects Of Milk Processing On The Milk Fat Globule Membrane Constituents, Xiomara E. Elías-Argote

Master's Theses

ABSTRACT

Effects of Milk Processing on the Milk Fat Globule Membrane Constituents

Xiomara E. Elías-Argote

The milk fat globule membrane (MFGM) is avidly studied by many groups of scientists around the world due to its unprecedented nutritional and functional properties; however, limited research has been performed on the effects of milk processing on the chemical changes of the MFGM. Thus, this study highlights the changes that lipids and proteins undergo from the time milk leaves cow’s udders. Cooling (4 °C) was included along with subsequent pasteurization by different traditional thermal processes and cold pasteurization by pulse light ultra violet treatment. …

Evaluation Of Vacuum Packaging On The Physical Properties, Solubility, And Storage Space Of Dairy Powders, Hadi Eshpari

Master's Theses

As many of the dairy powders manufactured have to travel long distances to reach their customers, both domestically and internationally, there is considerable interest among dairy powder manufacturers to maintain the quality of their products for relatively long storage periods. Dairy powders can have a long shelf life if packaged and stored properly. Vacuum packaging can be an attractive packaging strategy to maintain the quality of dairy powders and provide added value by improving the efficiency of using the storage space; because of the inherent compactness of these products. Vacuum packaged dry dairy ingredients may also have added ease of …

Investigation Of Mirnas Expression In A Citron-Kinase Mutant Model Of Microcephaly, Shan Parikh

Master's Theses

Mutation of Citron-Kinase (Cit-K) in rodents causes substantial reductions in the number of neurons generated in the CNS and results in a primary microcephaly-like phenotype. Evidence from drosophila genetics has further established a genetic link between Cit-K and a protein Argonaut 1 (AGO1), which is required for proper functioning of the miRNA machinery (2). Experiments characterizing the role of miRNAs in the developing cortex demonstrate the requirement of miRNAs for differentiation of neural progenitor cells starting at embryonic day 12.5 (3). Together, this evidence links the role of miRNAs to neurogenesis and thus this relationship warrants further investigation. Here miRNA …

The Regulation Of Liv-1 Mrna In Mda-Mb-231 Human Breast Cancer Cells And Its Association With E-Cadherin (Cdh1), Leelyn Chong

Master's Theses

LIV-1, the estrogen-regulated gene encoding a member of the ZIP family of zinc transporters (SLC39A6), has been implicated in both growth and metastasis of estrogen-receptor (ER) positive (+) and negative (-) breast cancer cells. In ER⁺ breast cancer cells, LIV-1 expression is induced by both estrogen and insulin. In embryonic cells, LIV-1 has also been negatively associated with the expression of the cell adhesion protein, E-cadherin (CDH1), thought to play a role in metastasis. In the present study, we investigated the regulation of LIV-1 and its relationship to CDH1 in MDA-MB-231 ER^- breast cancer cells. Cells were …

Isolation Of Antifungal Lactic Acid Bacteria From Food Sources And Their Use To Inhibit Mold Growth In Cheese, Dan Zhao

Master's Theses

A large amount of cheese is lost every year due to mold contamination. Biopreservation, which is the use of biological entities (microbes) and their metabolites to suppress microbial spoilage instead of chemical preservatives has lately gained increasing interest. Lactic acid bacteria (LAB) have the potential for use in biopreservation, because they are safe to consume and naturally exist in many foods. In this study, fifteen strains of lactobacilli isolated from dairy products, vegetables, and fermented pickles were tested by agar overlay assay for their anti-mold activity. Six strains grown on MRS agar showed strong inhibitory activity against a target mold …

The Effect Of Processing Parameters And Methylcellulose On Texture And Consumer Acceptability Of A Non-Melting Dairy Protein Gel, Joshua Goldman

Master's Theses

The overall goal was to understand the capabilities of a dairy based meat alternative.  This was done in three phases: 1) the production of a dairy protein gel as a base for a dairy based meat alternative, 2) texturization of the dairy protein gel base to produce a nugget like texture, and 3) a consumer test to determine the acceptability of the dairy based nugget compared to meat and meat alternatives on the market.

For phase I, a dairy protein gel base was tested to understand the textural attributes.  Milk to whey percentages and level of acidification were examined to …

Studying Milk Coagulation Kinetics With Laser Scanning Confocal Microscopy, Image Processing, And Computational Modeling, Richard Joseph Hennessy

Master's Theses

The kinetics of milk coagulation are complex and still not well understood. A deeper understanding of coagulation and the impact of the relevant factors would aid in both cheese manufacturing and also in determining the nutritional benefits of dairy products. A method using confocal microscopy was developed to follow the movement of milk fat globules and the formation of a milk protein network during the enzyme-induced coagulation of milk. Image processing methods were then used to quantify the rate of coagulation. It was found that the texture of the protein network is an indicator of the current status of the …

The Ma-10 Cell Line As A Model Of Insl3 Regulation And Leydig Cell Function, Mary E. Strong

Master's Theses

Leydig cells produce testosterone in response to luteinizing hormone (LH) via the cyclic adenosine monophosphate (cAMP)/protein kinase A pathway. Additionally, these cells are responsible for producing insulin-like peptide 3 (INSL3), a peptide hormone that is essential for testicular descent. The insl3 promoter in Leydig cells can be activated by cAMP through the transcription factor Nur77, which has also been shown to regulate the promoters of the steroidogenic enzymes, cyp17 and 3b-hsd. While the mechanism of LH action on testosterone production is well characterized, the effect of LH on insl3 abundance has yet to be shown directly. The MA-10 …

A Novel Exercise Device For Users In Wheelchairs: A Study Of Abdominal Muscle Activation, Rebecca Jo Campbell

Master's Theses

This study evaluates the use of a wheelchair balance board. The balance board was created as a sensory stimulation tool for users with various disabilities. It was originally designed to create vestibular stimulation for the person after they were loaded on.  This study was used as a way to test if the balance board could be used for other things such as physical therapy and exercise.  Ten able-bodied individuals were used to show the functionality of the device.  They were asked to perform six different abdominal exercises while the muscle activity of their rectus abdominis and external obliques was measured …