Life Sciences Commons^™

Phylogenetic Diversity Of Microbial Isolates From The Mars Pathfinder, Kyla Bradylong, Adriana Blachowicz, Parag Vaishampayan, James N. Benardini, Wayne Schubert

STAR Program Research Presentations

As spacecraft are sent to different planets, they take with them microscopic pieces of life from Earth. It is the task of the Biotechnology and Planetary Protection Group to keep as much of this life off other planets as possible as well as document any life that may have been sent. During the construction of the Mars Pathfinder, samples were collected from various locations on the spacecraft to test for contamination. These samples were then isolated, grown, documented, preserved and their 16S rRNA genes were sequenced for identification. The 16S rRNA gene sequence is utilized because it is a highly …

The Path To The Sea: Leatherback Hatchling Orientation At Sandy Point National Wildlife Refuge, Christina Macmillan, Kelly Stewart

STAR Program Research Presentations

Once sea turtle hatchlings emerge from their nest, they must find their way to the ocean by using cues such as a bright horizon and the slope of the beach. While moving toward the water, hatchlings often must navigate past predators and through vegetation, sticks, footprints in the sand, and other dangers such as ghost crab holes. Sometimes hatchlings become confused (or disoriented) and turn in circles to find the right route to the water. Sea turtle hatchlings also may become disoriented as a result of human impacts such as town lights or trash. The purpose of our experiment was …

Growing Conditions For Algae, Angeles Mora, Tamar Melkonian, Alejandro Calderon-Urrea

STAR Program Research Presentations

With the growing demands of water in California and the increasing cost of fossil fuels to operate water-cleaning equipment, Algae was cultivated in different concentrations of Nitrogen, Phosphorus, and Potassium (NPK) during different trails to identify the best growing conditions for the removal water contaminates. Before testing algae in waste water, the Algae: Dunaliella Primolecta, Chlorella Vulgaris, and Scenedesmus Dimorphus were cultivated in four different media containing distilled water and plant vitamins. The different mediums used include: Orchid Grow More (20-20-20), Miracle Grow (30-10-10), Murashige & Skoog, and Orchid Bloom Boster (11-35-15). As a result of the investigation, the algae, …

Light Pollution Research Through Citizen Science, John Kanemoto

STAR Program Research Presentations

Light pollution (LP) can disrupt and/or degrade the health of all living things, as well as, their environments. The goal of my research at the NOAO was to check the accuracy of the citizen science LP reporting systems entitled: Globe at Night (GaN), Dark Sky Meter (DSM), and Loss of the Night (LoN). On the GaN webpage, the darkness of the night sky (DotNS) is reported by selecting a magnitude chart. Each magnitude chart has a different density/number of stars around a specific constellation. The greater number of stars implies a darker night sky. Within the DSM iPhone application, a …

Xrf Analyses Of Prehanford Orchards, Komal Rana

STAR Program Research Presentations

Subsequent to 1943, the use of Lead Arsenic was banned from the Orchards standing on the Hanford site. This use of Lead Arsenate pesticide was popular among the orchard owners and was dispersed over the site in a myriad of ways. The presence of the traces of lead and arsenic are found today, more than half a century later. Using a portable X-ray florescence analyzer (XRF), the values of lead and arsenic are evaluated while determining the efficiency of the equipment itself. Samples from different decision sites were collected, with lead arsenic values in the low, high and medium range …

Comparison Of The Promega And Kikkoman Atp Devices, Ryan Hendrickson, James Nick Benardini, Kasthuri Venkateswaran

STAR Program Research Presentations

Planetary Protection (PP) is a scientific discipline that aims to protect other celestial bodies from microorganisms found on Earth by preventing forward and backward contamination. Forward contamination is bringing life from Earth to a given celestial body and backward contamination is preventing contamination of eventual sample return missions from Mars back to Earth. PP verifies that NASA Planetary Protection requirements are met in part via the NASA Standard Assay in order to support the launch approval process and to comply with international law. The NASA Standard Assay verifies these bioburden requirements by quantifying any aerobic, heterotrophic, and heat-shock resistant isolates. …

Mother Convict Cichlids Inflict More Bites Upon An Intruder In Hot Temperatures, Jesse L. Heckendorf

STAR Program Research Presentations

Convict cichlids (Archocentrus nigrofasciatus) have developed to be extremely good parents by protecting their brood. Parental care leads to aggressive biting, chasing, and gill flaring to intimidate known predators. In this experiment, we show that environmental factors, such as the changing of temperature in this case, affect a female convict cichlid’s aggression toward caring for her offspring when an intruder is introduced. Females attack more in warmer water.

Salinity Distribution Of Microplankton In The San Francisco Estuary, Carrie Ann Sharitt, Lindsay Sullivan, Wim Kimmerer

STAR Program Research Presentations

Microplankton are a diverse group of planktonic organisms ranging from 0.02 to 0.2 millimeters. Since the group is defined solely by size, it spans numerous taxonomic groups, including both heterotrophs and autotrophs. Microplankton are abundant in all aquatic ecosystems and are important prey for many organisms, including bivalves, crustaceans, and fish. The San Francisco Bay is truly an estuary as saltwater enters the estuary under the Golden Gate Bridge and freshwater flows in from the Sacramento and San Joaquin Rivers. Thus, there is a gradient of salinity from freshwater (0) in the rivers to saltwater by the Golden Gate Bridge …

Assessment Of Salmon Habitat On The Feather River, Nathan Sweem

STAR Program Research Presentations

Human activity in central valley streams has had a significantly negative impact on salmon habitat (Williams 2006). The presence of dams impedes sediment transport which is critical to salmon spawning (Williams 2006; Kondolf 1997). As part of an effort to enhance salmon spawning, the California Department of Water Resources added 7000 ft³ of gravel to Cottonwood Hatchery, Upper Auditorium, and Auditorium riffles on the Lower Feather River below the Thermalito Dam Complex in July of 2014. Stream conditions at Cottonwood Hatchery riffle were assessed by conducting analysis of sediment grain size, water depth and velocity, gravel permeability, and dissolved …

Aquaponics And Basil Plant Density, Danika L. Macmaster, Brook Murphy, Dudley Burton

STAR Program Research Presentations

Aquaponics is the use of water from a fish tank to provide nutrients to plants in a soil-less environment. The rocks cultivate the bacteria that turns the ammonia into nitrates that the plants need, and the plant bed functions as a filter for the fish tank. In this study, with the guidance of Doctor Dudley Burton, Doctor Brook Murphy, we researched the optimal plant density for basil in an Aquaponics system. We attempted to control or measure all the other variables to consider, as to isolate the variable of distance between plants. The water flow was spread through the plant …

Habitat Preference Of The Introduced Green Crab Carcinus Maenas, Brittany Susan Daum, Andy Chang

STAR Program Research Presentations

The aim of this experiment was to determine if Carcinus Maenas (European Green Crab) hhas a habitat preference in Seadrift Lagoon located in Stinson Beach, California. This experiment was accomplished by placing crab traps on the two types of substrate in Seadrift (sand and algae). The traps were pulled up every 24 hours and the size and sex of crabs was recorded. The data was analyzed to see if there was a difference in habitat preference based upon size, sex, and number of crabs. Using a Poisson Regression model, the size and sex of crabs were not significantly different between …

Functional Response Of Protected Larval Delta Smelt, Carrie Fong, Lindsay Sullivan, Wim Kimmerer

STAR Program Research Presentations

Delta smelt, Hypomesus transpacificus, is a slender and small-bodied fish, (Limnoithona tetraspina, under a controlled lab setting. Delta smelt at 132 dph were placed in buckets with different concentrations of prey, L. tetraspina. Larval stage delta smelt were given 2 hours to feed. When the experiment was over, fish were then dissected and analyzed to see how many prey were ingested. So far the data suggests that delta smelt may be prey limited. In the controlled lab conditions fish were given much higher prey densities than what would normally be available in the wild. Not having enough prey …

A Multicultural Nutrition And Culinary Intervention For Middle School Students: Pink And Dude Chefs, Phase 2, Jaime Lynn Lockhart

Master's Theses

The prevalence of adolescent obesity in the United States has more than quadrupled in the past 30 years, growing from 5% to nearly 21% in 12-19 year olds. Although obesity has many interrelated causes, a lack of knowledge and practical skill to prepare healthy food from scratch is an important factor. Research indicates that nutrition and culinary interventions based on behavioral change theories may improve mediators of healthful eating in adolescents.

Pink and Dude Chefs, Phase 2, an eight-week after-school nutrition and culinary intervention targeted towards middle school students in a predominantly low-income, Hispanic community, was developed and evaluated. The …

Examining The Impacts Of State Route 101 On Wildlife Using Road Kill Surveys And Remote Cameras, Sara Ann Snyder

Master's Theses

Roads can negatively impact the survival of wildlife populations through additional mortality from road kill and population fragmentation caused by road avoidance behaviors. The 11.9 mile section of State Route 101 between the towns of San Luis Obispo and Atascadero, CA, USA, cross a mountain lion movement corridor and an area important to maintaining ecological connectivity between protected lands in the Los Padres National Forest to the north and south.

I examined the spatial patterns and landscape and roadway factors associated with road kill occurrence for six taxa; large mammals, mesocarnivores, squirrels, rabbits, birds and raptors. Between 1 May 2009 …

Sex Ratio Assessment Of Endangered Kemp’S Ridley Sea Turtle Foraging Populations: Validation Of A Testosterone Elisa For Juvenile Sex Determination, William A. Hilton, Camryn D. Allen

STAR Program Research Presentations

Currently all species of sea turtles are listed as threatened or endangered with extinction under the U.S. Endangered Species Act. In order to effectively construct management approaches we need as much information on various sea turtle populations as possible including demography, genetic origin, and critical habitat. One demographic piece of data that is lacking is the sex ratio of turtle populations in foraging habitats, as this information is integral in determining overall population abundance. Because secondary sex characteristics (i.e. males have longer tails) are not evident until turtles start to reach sexual maturity, the sex of juvenile turtles cannot be …

Behavioral And Hormonal Flexibility Across Light Environments In Guppies (Poecilia Reticulata), Julia C. Walz

Master's Theses

Behavior may be dramatically influenced by changing environments, and differences in light intensity environments may have important behavioral consequences. One approach to understanding changes in behavior is by studying behavioral syndromes, suites of correlated behaviors reflecting between individual consistencies in behavior expressed within a behavioral situation (e.g., correlations between antipredator behaviors in different habitats), or across behavioral contexts (e.g., correlations among feeding, antipredator, or mating behavior) (Sih et al. 2004a). Guppies (Poecilia reticulata) provide a great model system to study behavior. Guppies are small, freshwater tropical fish that inhabit still pools in swift-flowing streams, and the backwaters of small rivers …

A Comparison Of Fatigue During Cardiocerebral Resuscitation With Different Compression Rates Among Layperson And Professional Rescuers, Christopher Cassidy

Master's Theses

Quality chest compressions during Cardiopulmonary Resuscitation (CPR) are vital to maintaining adequate perfusion of oxygenated blood to the organs of the body to sustain life. Over the years, the compression rate recommended in Basic Life Support (BLS)/ Advanced Cardiac Life Support (ACLS) protocols for the best possible outcome has risen, and with that increase there are questions regarding rescuer fatigue and the effectiveness of compressions. Layperson and professional rescuers, answering to an emergency, both maintain continuous chest compressions until advanced life support arrives. Depending on the location, this arrival time would most likely be longer than the two minute standard …

Development Of A Public Education Website: Building Bridges Over Water, Angelina Mckee

Agricultural Education and Communication

Website created by Angelina McKee to educate the public about water resource issues. Water is the basic unit of life, water resources are the basis for what societies and ecosystems are founded upon. Water shortages and droughts are more prevalent in our ever-changing world. It is no shock that there are discrepancies between various stockholders on either sides of the dry riverbed. This senior project resulted in the development of a website that addresses global water resources, water use in California, water conservation, and water allocation. The website informs the public on water resources and related issues and will hopefully …

The Role Of Carotenoid Cleavage Dioxygenase 4 In Flower Color Of The Allopolyploid Brassica Napus, Leanne Denice Fogg

Master's Theses

Allopolyploids are formed by interspecific hybridization and whole genome duplication, with the resulting organism contains multiple distinct subgenomes in one nucleus. Subgenomic interactions result in massive genetic and epigenetic reconstruction, contributing to variable phenotypic traits noted in newly formed allopolyploids. To better understand these mechanisms in the context of molecular biology, evolution, and plant breeding, plant biologists study the model organism Brassica napus (farmed as canola or oilseed rape). With white-flowering and yellow-flowering progenitors, flower color phenotype of B. napus presents an opportunity to examine subgenomic interactions. CAROTENOID CLEAVAGE DIOXYGENASE 4 (CCD4) is known to play a major …

Proliferation, Migration, And Survival Of Cells In The Telencephalon Of The Ball Python, Python Regius, Thomas B. Bales

Master's Theses

Reptiles exhibit neurogenesis throughout the brain during adulthood. However, very few studies have quantified telencephalon-wide neurogenesis in adulthood, and no studies have performed these investigations in snakes. Quantifying neurogenesis in the adult snake is essential to understanding class-wide adult neurogenesis and providing insight into the evolution of this trait. The thymidine analog 5-bromo-2’-deoxyuridine (BrdU) was used to quantify cell proliferation, migration, and survival in the ball python (Python regius). First, to determine the proper dose of BrdU for injection we subcutaneously injected 50mg/kg, 100mg/kg, and 250mg/kg into 15 adult male P. regius. We found the 250mg/kg dose …

Traversing Swanton Road, 16th Ed., James A. West

Academic, Government & Associated Organizational Research Resources

Situated at the northwest end of Santa Cruz County and occupying circa 30 square miles of sharply contrasted terrain, the Scott Creek Watershed concentrates within its geomorphological boundaries, at least 10-12% of California's flora, both native and introduced. Paradoxically, the use/abuse that the watershed has sustained over the past 140+ years, has not necessarily diminished the biodiversity and perhaps parallels the naturally disruptive but biologically energizing processes (fire, flooding, landslides and erosion), which have also been historically documented for the area for +60 years. This is an early edition of an extensive document by James A. West. Please visit the …

Dreams And Learning, Cody Mebane Gibbons

Symposium

Project Summary: This study is being done to test one aspect of how paying attention to one’s dreams may influence our waking lives. The idea was inspired by research linking the brain processes involved in long-term memory storage to qualities of dreaming, as well as the potential for learning in lucid dreams. It is hypothesized that the more conscious one is of one’s dreams and dream world, the better one will be at learning. In order to test this, the dreaming ability of 300 Cal Poly students will be analyzed via dream questionnaires with the purpose of seeing if any …

Characterizing The Response Of Multidrug-Resistant Klebsiella Pneumoniae Species To The Application Of A Phage Cocktail, Steven Liu

Symposium

Project Summary: The application of bacteriophages to treat bacterial infections is known as phage therapy, which takes advantage of bacteriophage’s natural ability to infect and lyse bacterial hosts. Phages have been shaped by billions of years of evolution to be highly specialized deliverers of bactericidal agents to the cytoplasm of their target bacteria. Ever since discovery of bacteriophages in 1915, phage therapy was recognized as a potentially powerful tool for eliminating bacterial infections. The effectiveness of phage therapy can be increased by creating a mixture of multiple phages to target a wider variety of bacterial strains. Furthermore, phage therapy has …

Cultural And Environmental Factors Affecting The Production Of Dendranthema X Grandiflorum, Mary Rebecca Lacy

Horticulture and Crop Science

The purpose of this experiment was to reduce the schedule of cut mum production by decreasing the number weeks of long days and supplementing the flowers with the plant hormone gibberellic acid (GA). GA is a plant hormone which enlarges the cells of the stems and could conceivably affect mum vegetative growth during long days. In this experiment, long days were reduced to 0, 3, 10, 13, 17 and 20. During the long day treatments, different rates of products were applied. Both ProGibb 4% and Fascination were used to look at the effects of the different variations of GA; GA …

Investigating Meter Scale Topographic Variation As A Factor Of Monterey Pine (Pinus Radiata) Growing Conditions At Kenneth Norris Rancho Marino Reserve, Cambria, Ca, William J. Meyst

Natural Resources Management and Environmental Sciences

Endemic Monterey pine (Pinus radiata) is limited to three locations in California due to its unique ecological requirements. This project was conducted to investigate spatial growth patterns ofMonterey pine over complex ground surfaces. The coastal hills of Rancho Marino Reserve, Cambria, were surveyed using four 150-m transects to quantify and record ground surface features and growing conditions ofMonterey pine. Changes in elevation of each transect were measured using an Abney level. Linear ground surfaces were found at 86% (344 of 400) of survey nodes. Convex ground surfaces were found at 10.5% of survey nodes (42 of 400). Of …

Biodiversity: A Guide To Agricultural Wildlife, Rebecca Ozeran, Elaina Cromer

Animal Science

We have compiled a list of the birds and mammals that we documented at selected locations on campus. Through this document we aim to offer an easily accessible resource that students, faculty, and visitors can utilize to not just satisfy their curiosity but also spark further contemplation. For each species and for each location, we have also summarized the possible implications of our observations from a holistic perspective. The purpose of this is to get people to think about the way land is managed and what may indicate that it is being mismanaged or that the certain aspects of current …

Incorporation Of Equine Assisted Therapy In University Curriculum, Shelby Y. Sabati

Animal Science

Equine-assisted activity and therapy incorporates physical, mental and language treatments through equine movement to remediate medical conditions or impairments in clients. For all the opportunities that equine-assisted therapy provides there is little education on the practice. The focus of this project is to present the process, benefits and limitations of adopting an equine-assisted therapy course at California Polytechnic State University so it may be used as a reference for future course proposal.

Objective: The aim of this proposal is to offer insight into Equine-assisted therapy, understanding how to integrate the Professional Association of Therapeutic Horsemanship (PATH) International curriculum into the …

The Effect Of Increasing Rates Of Biochar On Corn Grown In Salinas Clay Loam, Joshua Fridlund

Agricultural Education and Communication

In order to sustain the ever growing global population, agriculture needs to not only increase yields but to increase yields in a way that is sustainable and is either environmentally neutral or has a positive effect on the environment. Biochar offers a solution to this challenge with numerous environmental benefits, as well as agricultural benefits (Lehman and Joseph 2009). The agricultural benefits of biochar have been well documented in tropical climates, with the benefits of biochar for other climates, such as temperate climates and Mediterranean climates, relatively unknown (Blackwell et. al. 2009). To determine the effect of biochar on agricultural …

Veggielution Community Farm Workday Leader And Farm Intern Training Manual, Sarah Wool

Agricultural Education and Communication

The purpose of this project was to write an updated and complete Workday Leader and Farm Intern training manual that could be used at Veggielution Community Farm. It could be presented as reference materials while participants are in the Workday Leader class or could be presented to Farm Interns to orient them on different jobs they might face while working on the farm. This manual provides general overview of many organic farming practices, as well as specific guidelines that Veggielution uses. It also focuses on leading volunteers to have effective workdays. It is hoped that this manual will be actively …

Developent Of A Phospholipid Encapsulation Process For Quantum Dots To Be Used In Biologic Applications, Logan Grimes

Master's Theses

The American Cancer Society predicts that 1,665,540 people will be diagnosed with cancer, and 585,720 people will die from cancer in 2014. One of the most common types of cancer in the United States is skin cancer. Melanoma alone is predicted to account for 10,000 of the cancer related deaths in 2014. As a highly mobile and aggressive form of cancer, melanoma is difficult to fight once it has metastasized through the body. Early detection in such varieties of cancer is critical in improving survival rates in afflicted patients. Present methods of detection rely on visual examination of suspicious regions …