Biomedical Commons^™

Unmixing In Very High Spatial Resolution Hyperspectral Images, Ana C. Chavez Lopez

Open Access Theses & Dissertations

Hyperspectral Imaging (HSI) captures hundreds of contiguous narrow wavelength bands across the optical region of the electromagnetic spectrum collecting the spectral signature of materials in the field of view of the sensor enabling detailed analysis of each pixel's spectral signature. Satellite or airborne remote sensing systems often capture imagery with low to moderate spatial resolution (LMSR). At these resolutions, the measured spectral signature is a mixture of the signatures of the materials within a single pixel. This mixing of spectral information makes analysis and material identification difficult. Hyperspectral unmixing is an analysis technique that decomposes a pixel's spectrum into constituent …

Thermal Inkjet Bioprinting Of Human Fibroblasts Into Stem Cell Environment Leads To Stem-Like Gene And Protein Expression And Changes In Hippo Pathway Effectors Yap/Taz, Patricia Ablanedo Morales

Open Access Theses & Dissertations

Thermal inkjet bioprinting (TIB) has emerged as a powerful tool with many potential applications, such as organ regeneration, drug testing, and cell differentiation, among others. Despite the forces and stress that cells are subjected to during the printing process, there is little research that investigates in detail the combined effects of the TIB process and the surrounding environment on cells. Furthermore, a cell's biological environment greatly influences its behavior. Therefore, understanding the effects of bioprinting on cells in a particular environment at a genetic level can provide clues regarding changes in cell characteristics. Bioprinting could potentially be used as a …

Effects Of Environmental Stressors On Human Tissue-On-A-Chip Platforms, Andie Padilla

Open Access Theses & Dissertations

As space exploration begins to extend beyond low earth orbit, it has become increasingly critical to understand the interaction of the extreme environment of space flight with human systems. While it is known that space-travel induces a vast array of complications to cardiac, neural, musculoskeletal, and immune systems, the mechanisms by which these complications occur are poorly understood. Current research to study the effects of microgravity and radiation are limited to ground simulations, which rarely account for the multifactorial stressors experienced during spaceflight, or long duration studies aboard the International Space Station. Similarly, traditional two-dimensional (2D) models lack the ability …

Fibrin-Polycaprolactone Scaffolds For The Differentiation Of Human Neural Progenitor Cells Into Dopaminergic Neurons, Salma Paulina Ramirez

Open Access Theses & Dissertations

This project aimed to develop a tissue-on-a-chip platform for studying Parkinson's Disease (PD) using dopaminergic (DA) neurons. PD is a neurodegenerative disorder characterized by progressive loss of DA neurons, leading to involuntary movements and other symptoms. Early diagnosis and deeper understanding of PD pathogenesis are crucial for improving disease management and patient outcomes. To model PD in vitro, this research utilized human-induced pluripotent stem cell (hiPSC)-derived neural progenitor cells (NPCs) cultured on electrospun (ES) polycaprolactone (PCL) scaffolds. Given PCL's hydrophobicity, ECM-based biomaterial coatings, including Cell Basement Membrane (CBM) proteins, Matrigel, and Fibrin, were explored to enhance NPC adhesion, differentiation, and …

Myofibroblast Targeted Liposomes For The Treatment Of Skin Fibrosis, Elfa Beaven

Open Access Theses & Dissertations

Continuous overactivation of myofibroblasts leads to excessive deposition of profibrotic proteins, which in turn causes tissue stiffness and, ultimately, organ failure. One of those proteins, Cadherin-11 (CDH11), is reported to be overexpressed in the tissue of fibrotic skin, specifically on myofibroblasts. Similarly, chronic inflammation drives fibrosis progression in autoimmune-related illnesses like systemic sclerosis (SSc). Therefore, it is hypothesized that CDH11 could be a target for cell-specific delivery of antifibrotic therapies to fibrotic skin tissue. Here, a CDH11 peptide conjugated liposome loaded with Tofacitinib, a JAK inhibitor, was developed to understand the potential of targeted therapies to treat skin fibrosis. The …

Development Of 3d Human Cardiovascular And Cancer Tissue Model Within A Self-Driven Microfluidic Platform For Preclinical Drug Screening, Aibhlin Alexis Esparza

Open Access Theses & Dissertations

According to the American Heart Association and World Health Organization, cardiovascular diseases (CVDs) are the leading cause of death worldwide. Monolayer cell culture (2D) and animal models are conventional methods to study CVDs, however, they limit researcherâ??s ability to simulate the human cardiovascular cellular microenvironments and accurate predication of pharmaceutical drug responses. Human induced pluripotent stem cell derived cardiomyocytes (hiPSC-CMs), biomaterials, and microfluidic technologies can be combined to create a controlled, reproducible 3D platform to study physiologically-relevant cellular responses to biochemical and physical changes in the microenvironment. My dissertation work demonstrates the development of novel self-driven microfluidic devices designed with …

Effect Of Patient Specific Blood Biomarkers On Nanoparticle - Cell Interactions, Veronica Gabriela Contreras

Open Access Theses & Dissertations

Nanoparticles are currently known to be a promising material class for bio-applications in drug delivery and vaccine development. Using gold nanoparticles of varied sizes, in this case 45 and 100 nanometers as a model nanomaterial system, we investigated how patients' blood physiology and chemistry (such as solute, protein, lipid levels) affect the biological response to bionanomaterials. When nanoparticles are injected into the body, biomolecules in the blood adsorb to the nanoparticle's surface to form a biomolecular corona that is specific to the patient's unique blood composition. This biomolecular corona is important because it affects the in vivo fate and biodistribution …

Bcl2 Mediated Targeted Drug Delivery For The Treatment Of Kidney Fibrosis And Stomach Cancer, Humayra Afrin

Open Access Theses & Dissertations

Apoptosis, the programmed death of cells, is primarily regulated by a delicate balance between pro-apoptotic and anti-apoptotic signals. The Bcl-2 (B-cell lymphoma 2) family of proteins acts as anti-apoptotic agents, promoting cell survival. Dysregulation of these proteins is a common occurrence in conditions such as cancer and fibrosis, where overexpression of anti-apoptotic members can foster tumor cell survival and fibroblast activation. In this study, our aim was to explore the therapeutic potential of Bcl-2 inhibitors, both as a small molecule (specifically Navitoclax (Navi)), inhibitor and as Bcl-2 siRNA, for targeted treatment. Intravenous administration of Navi often leads to thrombocytopenia, necessitating …

Biofabrication Of Human Tissue-On-A-Chip Models Using Engineered Biocompatible Electrospun Scaffolds, Zayra Naomi Dorado

Open Access Theses & Dissertations

This study explored the adoption of furfuryl gelatin (F-gelatin) based electrospun scaffolds compared with poly-caprolactone (PCL) as promising biomaterials for tissue engineering applications. Tissue-on-a-chip models, incorporating F-gelatin and PCL electrospun scaffolds, offer promising avenues for healthy and disease-in-vitro tissue models that can be explored to investigate underlying physiological mechanisms involved in disease development. Previous research has demonstrated the cytocompatibility of F-gelatin when used for modifying implant surfaces and tissue repair applications [1]. Our earlier published works have also successfully utilized F-gelatin for in-vitro cardiac tissue engineering [2][3]. We designed F-gelatin and PCL electrospun scaffolds to replicate the native tissue extracellular …

Selective Transfection Of A Transferrin Receptor-Expressing Cell Line With Dna-Lipid Nanoparticles And Synthesis Of Parasite-Derived Glycans As Biomarkers For Leishmaniasis, Irodiel Vinales Lozano

Open Access Theses & Dissertations

Despite notable progress in lipid nanoparticle (LNP)-mediated gene delivery, achieving selective transfection of specific cell types, such as cancer cells, remains a significant hurdle, hindering the advancement of innovative gene therapies. In this study, we engineered an LNP formulation encapsulating plasmid DNA (pDNA) encoding the monomeric Green Lantern (mGL) fluorescent reporter protein. The DT7 peptide ligand targeting human transferrin receptor 1 (hTfR1) was also conjugated to the LNP surface for targeted delivery to hTfR1-expressing cells. Optimization of LNP composition yielded favorable particle diameter, ζ-potential, yield, and pDNA encapsulation efficiency. Evaluation of transfection selectivity using a panel of two engineered cell …

Development Of A 3d Printed Conductive Biopolymer For Cardiac Tissue Engineering, Britanny Lizeth Stark

Open Access Theses & Dissertations

Cardiovascular disease (CVD) is the leading cause of death in the US, with approximately 859,000 deaths each year. The major contributor to CVD is Acute Myocardial Infarction (AMI), which causes the death of approximately 25% of the cardiomyocytes present in the left ventricle of the heart. After AMI, the adult human heart has a very limited regenerative capacity. Moreover, the electrical propagation of the myocardium is severely disrupted, making the heart more susceptible to failure and patient death. However, current pharmacological treatments do not address the loss of cardiomyocytes and the disruption of electrical propagation in the heart. Tissue engineering …

Integration Of Biomedical Engineering And Computer Vision For Morphological Alteration Identification In Diabetic Cardiomyopathy: An Analysis And Evaluation Stra Tegy, Monica Delgado

Open Access Theses & Dissertations

Diabetic cardiomyopathy (DCM) is a type of heart disease that affects people with diabetes. It is characterized by changes in the structure and function of the heart, including thickening and stiffening of the heart muscle, impaired relaxation of the heart, and reduced pumping function. DCM is considered an ailment of the heart muscle and an increased risk factor in people with type 2 diabetes mellitus (T2DM). Although the exact mechanisms behind DCM are not fully understood, high blood glucose levels are known to contribute to the development and progression of the disease.While many options to manage and diagnose DCM have …

Development Of A Cost-Constrained Intelligent Prosthetic Knee With Real-Time Machine Learning, Predictive Stumble Control, Lucas Jonathan Galey

Open Access Theses & Dissertations

The field of biomechatronics is evolving quickly with advances in computer science, biology, and electrical and mechanical engineering. Coupled with increased interests in machine learning (ML) across all industry sectors, there are opportunities to leverage advanced analytics in uniquely complex problems. This study aimed to deploy real-time ML predictions in a novel microprocessor-controlled prosthetic knee (MPK) device capable of identifying and responding to stumble-events to reduce amputee fall prevalence. Innately, stumbling is a chaotic event. Current MPKs operate by detecting gait characteristics and reacting to preprogrammed states. While these systems are beneficial in significant ways, such as energy expenditure and …

Engineering 3d Bioprinted Cardiac Spheroidal Droplets With Cardiomyocytes And Cardiac Fibroblasts For Tissue Engineering And Drug Cytotoxicity Studies, Raven El Khoury

Open Access Theses & Dissertations

Engineering is the supreme human endeavor that involves harnessing the scientific understanding of the natural world to design and invent objects to improve the society around us. Biomedical engineering is the implementation of concepts acquired from engineering in biology and medicine that aims to improve human health through the integration of engineering with biomedical sciences. The mission of a biomedical engineer is to develop technologies that help advance the quality of peopleâ??s health using various tools and materials with one passion and goal: making the patient's life longer and easier. Tissue engineering is developed from the field of biomaterials and …

Design Of A Hemi-Anechoic Chamber For Acoustic Testing Of Hearing Devices And Development Of Custom-Designed 3d Printed Pinnae For Accurate Representation Of The Anatomical Frequency Response, Hector Hugo Estrada Medinilla

Open Access Theses & Dissertations

Sound localization is the capacity to identify the general location from which a sound is originating. The primary anatomical feature responsible for the ability to localize sound is the external portion of the ear, also known as the auricle or pinna. This faculty is significantly hindered when the ear is obstructed, as is the case with hearing protection devices (HPD), which act as a barrier between sound waves and the ear canal. In the case of electronic HPDs, certain frequencies are entirely filtered out by a digital sound processor (DSP) while the remaining frequencies are delivered directly into the ear …

Fetal Electrocardiogram Detection And Analysis From Maternal Abdominal Ecg For Diagnosis Of Fetal Heart Rhythm Abnormalities, Claudia L. Angel

Open Access Theses & Dissertations

Fetal cardiac arrhythmias are present in about 1–3% of pregnancies and account for about 10–20% of the referrals to fetal cardiology around the world. Most fetal arrhythmias are benign; however, some can cause fetal hydrops, preterm delivery, and higher perinatal morbidity and mortality. The evolution and treatment of fetal arrhythmia depend on a timely and complete diagnosis. However, conventional methods used in clinical practice for fetal arrhythmia diagnosis are limited since they do not reflect the primary electrophysiological conduction processes in the myocardium. Fetal electrocardiography (fECG) has the potential to better support fetal arrhythmia diagnosis through the continuous analysis of …

Development Of A Custom, 3d-Printed, Multi-Microphone, Noise-Cancelling, Hearing Protection Device With A Magnetically Attached Printed Ear Canal For Sound Localization Preservation, Brenda Leticia Valadez Mesta

Open Access Theses & Dissertations

Hearing loss is a prominent health issue that affects a significant fraction of the global population. One of the main causes behind hearing loss is exposure to harmful noise levels in the workplace. There have been multiple efforts to prevent hearing loss from excessive noise in occupational settings, such as hearing conservation programs and use of hearing protection devices (HPDs), however, these are often ineffective. Although HPDs are frequently available in the workspace, they are not used as intended since they usually generate discomfort and hindered sound localization. The loss of sound localization can be hazardous in occupational settings, since …

The Mobility And Cognitive Mechanisms Involved In Altering Gait Speed In Children With Autism Spectrum Disorder, Alyssa Olivas

Open Access Theses & Dissertations

Autism is a socio-behavioral disorder, and diagnoses are conducted through behavioral screening instruments. Recent research suggests motor deficits may be a core symptom of the disorder, as children with autism present with deficits in motor development, locomotor skills, and postural instability. In addition, children with autism often have affected, executive function, attention, and perception cognitive domains. Different gait speeds have been used to examine gait adaptations in other clinical populations. Additionally, individuals with decreased cognitive abilities have demonstrated difficulties in modulating their walking speed. There is limited research on mechanisms children with autism use to alter their gait speed, or …

Cell Bioprinting: A Novel Approach For Alpha Cell To Beta Cell Transdifferentiation, Atzimba Casas

Open Access Theses & Dissertations

Diabetes is a chronic disease that occurs in the body when the pancreas fails to either produce insulin (TID) or does not effectively use the insulin produced (TIID) and poses further health complications as well as an insurmountable economic impact.[1] Type I diabetes is an autoimmune disease characterized by a deficient amount of insulin production on account of the body’s immune system destroying its own β-cells.[2] Current diabetes treatment methods include the administration of insulin via injections or islet transplantation therapy. However, although both are viable options, they come with limitations that make the managing of this disease difficult. It …

Evaluation Of Varying Graphene Oxides Through Their Physicochemical Characterizations On Erythrocytes, Hs27 Cells, Escherichia Coli And Staphylococcus Aureus Bacteria Cell Lines, To Assess Graphene Oxides Cytotoxicity., Miriam Montana

Open Access Theses & Dissertations

Research on the toxicity of Graphene Oxides (GO) has captivated interest in the field of material science, environmental sciences, and medicine for their avail significance in biomedical engineer applications either as integrates, enhancements, or in the making of medical devices. Moreover, there is still a lack of understanding as to what characteristics on GOs causes them to be cytotoxic at a cellular level. In our study we synthesized four different GOs by varying in both the method used for oxidation (Modified Hummer’s method & Improved Marcano-Tour’s method), and the precursor parent graphite, for a standardization approach to aid in the …

Non-Invasive In-Vitro Glucose Monitoring Using Optical Sensor And Machine Learning Techniques For Diabetes Applications, Maryamsadat Shokrekhodaei

Open Access Theses & Dissertations

Diabetes is a major public health challenge affecting more than 451 million people. Physiological and experimental factors influence the accuracy of non-invasive glucose monitoring, and these need to be addressed before replacing the finger prick method with a non-invasive glucose measurement technique. Also, the suitable employment of machine learning techniques on experimental data can significantly improve the accuracy of glucose predictions.

This work includes the design, development, testing and data analysis of an optical based sensor for glucose measurements. The feasibility of non-invasive measurement of glucose within aqueous solutions that assimilate the composition of human blood plasma is investigated. The …

Engineering Cardiac Tissues With Three-Dimensional Bioprinting For Biomedical Applications, Matthew Alonzo

Open Access Theses & Dissertations

The role of a biomedical engineer is to solve unmet health-related needs that face society. For the past couple of decades, heart disease (HD) has remained the leading cause of mortality and morbidity worldwide. The disease is characterized by various pathologies that affect the heart. Indeed, malfunction of one of the bodyâ??s most vital organs is bound to manifest poor health and even death in patients. Despite advances in medicine and technology, heart disease continues to be prevalent and diminishes the quality of life for many around the world. Certainly, there exists a need for developing new tools to better …

Evaluation Of The Cytotoxyc Effects Of Lmdf5-7 On A Human T-Cell Leukemia Cell Line, Andrea F. Ibarra Chacon

Open Access Theses & Dissertations

According to World Health Organization (WHO), cancer is the second leading cause of death worldwide, with 9.6 million deaths in 2018 . In the United States, an estimated 434,982 people were living with cancer during 2017 . Leukemia is the most common blood cancer in children from birth to 14 years old . In particular, Hispanic children in the United States experience a higher incidence rate of leukemia . Therefore, the discovery of novel cancer therapies is necessary to help those affected survive the disease. A new compound, LMDF5-7 was investigated and found to have anticancer properties that can help …

3d Printing Of High Viscosity Fluids And Its Application In 3d Printing Of Prosthetic Teeth., Abhilash Aditya

Open Access Theses & Dissertations

The advancement in technology has brought forward non-conventional manufacturing methods that are efficient and advantageous for specific applications. 3D printing is one such outcome, whose applications stretch from biomedical applications to daily products. 3D printing is a rapidly growing technology, and innovative research developments have proven versatility in creating physical objects. Simplification and constant improvement in Fused Deposition Modeling (FDM) operation result from decades of research. However, 3D printing is material-specific and contributes to shortcomings in the technology. The build-material dictates the extrusion parameters, including the material discharge rate and head speed for a continuous flow. Customization being the prime …

Early Detection Of Asthma Via Enhanced Resolution Of Small Airways Using Ultra-Low Frequency Impulse Oscillometry, Christopher M. Aguilar

Open Access Theses & Dissertations

Examination of lung function for diagnosis and monitoring of diseases such as chronic obstructive pulmonary disease (COPD) and asthma can be performed with a variety of pulmonary function testing (PFT) techniques. The most commonly prescribed of these procedures are spirometry and whole-body plethysmography. However, these active participation tests depend on forced breathing maneuvers, may be physically exhausting, might not produce enough information, and are susceptible to being subject-dependent. In contrast, passive PFT approaches such as the forced oscillation technique (FOT) and the impulse oscillometry system (IOS) are increasingly being utilized for measuring lung mechanics because they require only minimal participation, …

Fabrication, Development, And Characterization Of Hipco Swcnt - Alginate Hydrogel Composites For Cellular Product Applications, Fabian Armando Alvarez-Primo

Open Access Theses & Dissertations

In this study, we designed, synthesized, and characterized ultrahigh purity single-walled carbon nanotube (SWCNT)-alginate hydrogel composites. Among the parameters of importance in the formation of an alginate-based hydrogel composite with single-walled carbon nanotubes, are their varying degrees of purity, their particulate agglomeration and their dose-dependent correlation to cell viability, all of which have an impact on the resultant compositeâ??s efficiency and effectiveness towards biomedical applications. To promote their homogenous dispersion by preventing agglomeration of the SWCNT, at first, we used three different surfactants-sodium dodecyl sulfate (SDS-anionic), cetyltrimethylammonium bromide (CTAB-cationic), and Pluronic F108 (nonionic). After experimentation and corroboration through evidence obtained …

Formulation Strategies To Enhance Solubility And Permeability Of Small Molecules For Drug Delivery Applications, Pradeep Kumar Bolla

Open Access Theses & Dissertations

All the new chemical entities/drug molecules intended for therapeutic use must be administered using an appropriate delivery system/dosage form to achieve maximum bioavailability. However, designing a drug delivery system is complex as several factors such as lipophilicity, molecular mass, crystallinity, ionic charge, polymorphic forms and hydrogen bonding) affect the solubility and permeability of these molecules. Biopharmaceutics drug classification system (BCS) categorizes the existing drugs into four classes based on the aqueous solubility and membrane permeability and it is reported that >70% of the drugs are poorly soluble and belong to BCS class II and BCS class IV. Several physical, chemical …

Supercritical Processed Decellularized Extracellualr Matrix As Regeneration Therapeutics Applying 3d Printing, Seungwon Chung

Open Access Theses & Dissertations

Extracellular matrix has been broadly applied and show great promise in medical applications and tissue engineering. Product of extracellular matrix (ECM) should be treated with decellularization and purification process. Supercritical carbon dioxide treatment is of particular interest for purifying ECM because of its medically available and rapid speed of process. However, it is not fully researched in treatment of biomaterials for tissue engineering. Therefore, we investigated optimal conditions of supercritical carbon dioxide processing in different extracting parameters from porcine adipose tissue. The 3-day, dual treatment including enzymatic decellularization and supercritical fluid extraction of pork adipose tissue were performed. Two types …

3d Printed Alginate-Based Zinc Oxide Nanoparticle Scaffolds For Wound Healing, Carol Cleetus

Open Access Theses & Dissertations

Effective treatment of chronic wounds is essential for the prevention of infection and scar tissue formation, requiring a novel approach to address the limitations of existing options. This study utilizes Calcium Chloride (CaCl2) crosslinked alginate, a common biomaterial widely used in wound dressing, and UV activated Zinc Oxide (ZnO) nanoparticles (NPs) for their potential hydroxyl radical mediated antibacterial applications. ZnO NPs were synthesized by combustion method from Zinc Nitrate Hexahydrate and Sucrose. Scanning Electron Microscopy (SEM) and X-Ray Diffraction (XRD) characterization were used to verify composition and NP size. Terephthalic Acid, used as a fluorescent probe, confirmed the generation of …

Regulation Of Schlafen 11 Expression, Christian Waldemar Corona Ayala

Open Access Theses & Dissertations

Schlafen 11 (SLFN11) is a member a family of proteins that can be found in mammals. Members of this family are involved in important functions. SLFN11 in particular has been identified as a restriction factor for several evolutionarily disparate viruses such as HIV-1 and Flaviviruses and to play an important role in DNA repair, sensitizing cells to chemotherapy. Despite its relevance SLFN11 remains largely uncharacterized. The aim of this research was to achieve a more comprehensive understanding the regulation mechanism of SLFN 11 expression. Before our research, it was only known that type I interferon (IFN) regulates SLFN11 levels. However, …