Physical Sciences and Mathematics Commons^™

Age And Growth Of Scotia Sea Icefish, Chaenocephalus Aceratus, From The South Shetland Islands, M. La Mesa, J. Ashford, E. Larson, M. Vacchi

OES Faculty Publications

Samples of Chaenocephalus aceratus (Lönnberg) were collected during a trawl survey carried out around the South Shetland Islands in January–February 2002. Fish were caught by commercial bottom trawl fishing down to 500 m depth, using a stratified randomized sampling design. As observed in other recent surveys within the same area, C. aceratus represented one of the predominant species. Overall, 357 specimens ranging from 13 and 67 cm (TL) were selected for the present study. Ages were estimated by counting annuli present in the sagittal otoliths, exposed by grinding and polishing along their sagittal plane. To estimate the precision of age …

On The Ecological Status Of The Concept "Boundary Conditions" - A Few Methodological Remarks, Lubomira Burchardt, Krzystof Lastowski, Harold G. Marshall

Biological Sciences Faculty Publications

Plant and animal populations are frequently found in habitats where the environmental conditions are considered extreme or challenging for life form to exist. These conditions may be classified as either: (1) Supreme: a situation characteristic of degradation conditions where only a few species live under stress, and (2) Extra-ordinary: habitats that provide high biodiversity that are under stress conditions. Due to the differences in what we consider extreme conditions, it is necessary to distinguish between these two categories, because they are not comparable. Our presentation will include examples of these two extreme environmental categories.

Light Dependence Of Selenium Uptake By Phytoplankton And Implications For Predicting Selenium Incorporation Into Food Webs, Stephen B. Baines, Nicholas S. Fisher, Martina A. Doblin, Gregory A. Cutter, Lynda S. Cutter, Brian Cole

OES Faculty Publications

The potentially toxic element selenium is first concentrated from solution to a large but highly variable degree by algae and bacteria before being passed on to consumers. The large loads of abiotic and detrital suspended particles often present in rivers and estuaries may obscure spatial and temporal patterns in Se concentrations at the base of the food web. We used radiotracers to estimate uptake of both selenite (Se(IV)) and C by intact plankton communities at two sites in the Sacramento/San Joaquin River Delta. Our goals were to determine (1) whether C and Se(IV) uptake were coupled, (2) the role of …

Prescribed Fire Impacts To Amphibians And Reptiles In Shelterwood-Harvested Oak-Dominated Forests, Patrick D. Keyser, David J. Sausville, W. Mark Ford, Donald J. Schwab, Patrick H. Brose

Virginia Journal of Science

As part of a larger study examining the role of prescribed fire in regenerating upland oaks (Quercus spp.), seasonal prescribed burns (winter, spring, summer, and unburned control) were applied to first-stage shelterwood-harvested stands on Horsepen Wildlife Management Area in the Virginia Piedmont in 1995. Because fire impacts are poorly documented for herpetofaunal communities, we surveyed these stands in 1996 capturing 133 individuals of ten species during over 12,720 pitfall trapnights. We found no significant differences in relative abundance of Eastern Red-backed Salamanders (Plethodon cinereus) (P = 0.26), American Toads (Bufo americanus) (P = 0.93), …

Advection, Krill, And Antarctic Marine Ecosystems, Eileen E. Hofmann, Eugene J. Murphy

CCPO Publications

Advective processes are recognized as being important in structuring and maintaining marine ecosystems. In the Southern Ocean advective effects are perhaps most clearly observed because the Antarctic Circumpolar Current (ACC) provides a connection between most parts of the system, including open ocean and continental shelf regions. The ACC also provides a mechanism for large-scale transport of plankton, such as Antarctic krill (Euphousia superba Dana), which is an important component of the Southern Ocean food web. This overview provides a summary of recent observational and modelling results that consider the importance of advection to the Southern Ocean ecosystem and, in particular, …

Hydrologic Variations Within Created And Natural Wetlands In Southeastern Virginia, Aaron Dyer Despres

OES Theses and Dissertations

The hydrology of wetlands, particularly how wetland soils collect, store, and redistribute water strongly affects how wetland systems function. In created wetlands, construction processes and materials influence the hydrology and consequently, the potential for successful reestablishment of target vegetation communities. During 2002–2004, the Virginia Department of Transportation constructed large mitigation wetlands on two different Quaternary aged surfaces with very similar hydrogeomorphic conditions. The Sandy Bottom Nature Park site (SBNP) located in Hampton, VA and rests on the sandy loam Tabb Formation while the Charles City Wetland site (CCW) lies on the older and clay-rich Shirley Formation. This study documents and …

Estimation Of Primary Production And Carbon Flux In Antarctic Coastal Waters: A Modeling Study, Hae-Cheol Kim

OES Theses and Dissertations

This study presents results from models that are designed to simulate the underwater light field, to simulate phytoplankton primary production, and to estimate the fate of phytoplankton carbon in continental shelf waters of the west Antarctic Peninsula (WAP) and Ross Sea. Simulation of the underwater light field required derivation of new coefficient sets for power function-type cloud cover correction algorithms, which were found to be influenced by multiple reflections between the bottom of clouds and the surface. The coefficient sets indicate that the spectral effect of clouds on the properties of the surface irradiance was spectrally-neutral for wavelengths greater than …

The Role Of Physical, Chemical, And Microbial Heterogeneity On The Field-Scale Transport And Attachment Of Bacteria, Brian J. Mailloux, Mark E. Fuller, Tullis C. Onstott, James Hall, Hailiang Dong, Mary F. Deflaun, Sheryl H. Streger, Randi K. Rothmel, Maria Green, Donald J. P. Swift, Jon Radke

OES Faculty Publications

A field-scale bacterial transport experiment was conducted at the Narrow Channel Focus Area of the South Oyster field site located in Oyster, Virginia. The goal of the field experiment was to determine the relative influence of subsurface heterogeneity and microbial population parameters on flow direction, velocity, and attachment of bacteria at the field scale. The field results were compared with results from laboratory-scale column experiments to develop a method for predicting field-scale bacterial transport. The field site is a shallow, sandy, unconfined, aerobic aquifer that has been characterized by geophysical, sedimentological, and hydrogeological methods. Comamonas sp. strain DA001 and a …

A Biooptical Model Of Irradiance Distribution And Photosynthesis In Seagrass Canopies, Richard C. Zimmerman

OES Faculty Publications

Although extremely vulnerable to coastal eutrophication, seagrasses represent important structuring elements and sources of primary production in shallow waters. They also generate an optical signature that can be tracked remotely. Accurate knowledge of light absorption and scattering by submerged plant canopies permits the calculation of important plant- and ecosystem-level properties, including rates of photosynthesis, vegetation abundance, and distribution. The objectives of this study were to develop a realistic, yet simply parameterized two-flow model of plane irradiance distribution through a seagrass canopy submerged in an optically active water column, to evaluate its performance against in situ measurements, and to explore the …

Effects Of Epiphyte Load On Optical Properties And Photosynthetic Potential Of The Seagrasses Thalassia Testudinum Banks Ex König And Zostera Marina L, Lisa A. Drake, Fred C. Dobbs, Richard C. Zimmerman

OES Faculty Publications

The biomass and optical properties of seagrass leaf epiphytes were measured to evaluate their potential impact on the photosynthetic performance of the seagrasses Thalassia testudinum Banks ex König (turtlegrass) and Zostera marina L. (eelgrass). Turtlegrass was obtained from oligotrophic waters near Lee Stocking Island, Bahamas; eelgrass was collected from a eutrophic environment in Monterey Bay, California. Leaf–epiphyte loads were characterized visually and quantified using measurements of their phospholipid biomass. Light absorption and reflectance of the intact epiphyte layer were determined spectrophotometrically. Turtlegrass epiphytes from the oligotrophic site absorbed a maximum of 36% of incident light in peak chlorophyll absorption …

Extracellular Enzyme Activity And Uptake Of Carbon And Nitrogen Along An Estuarine Salinity And Nutrient Gradient, Margaret R. Mulholland, Cindy Lee, Patricia M. Gilbert

OES Faculty Publications

Amino acid oxidation (AAO) and peptide hydrolysis (PH) are processes affecting the recycling of organic material and nutrients. We compared extracellular AAO and PH rates to C and N uptake rates along estuarine gradients of salinity, nutrients and productivity in the Pocomoke River, a subestuary of the Chesapeake Bay. This estuary is seasonally depleted in inorganic N, and rich in dissolved organic material (DOM) throughout the year. AAO, PH, and N uptake rates measured in 1999 and 2000 were not limited to particular size fractions measured, or to auto- or heterotrophic groups of organisms. At a station near the turbidity …

Recognizing Toxic Species In Aquatic Habitats: A Potential Concern In Lake Management, Mikolaj Kokocinski, Harold G. Marshall

Biological Sciences Faculty Publications

The importance of distinguishing toxic and non-toxic algal species is becoming a more common problem for management decisions associated with various freshwater and estuarine habitats. An example is given where two dinoflagellates, originally unidentified as closely resembling the toxin producing Pfiesteria spp., have been compared to these species. In order to clarify any relationship to Pfiesteria spp., scanning electron microscopy was used to determine the plate tabulation patterns of these dinoflagellates and make comparisons to the tabulation present in Pfiesteria spp. The results indicated significant differences in the plate tabulations of these taxa to distinguish them from Pfiesteria …

Experimental Investigation Of Elemental Incorporation In The Otoliths Of Larval And Juvenile Fish: Implications For Use As Environmental Recorders, Gretchen Bath Martin

Biological Sciences Theses & Dissertations

Innovative techniques for discerning fish stocks, identifying nursery habitats, locating spawning sites, tracing larval transport pathways, and quantifying the degree of population connectivity are required to meet the goals of sustainable management of marine capture fisheries. One of the most promising techniques is the use of elemental signatures in fish otoliths (ear stones), which record valuable life history data and serve as the link between fish and their environment. To validate the assumption that otolith elemental composition is a function of water elemental concentrations, and to address the possible effects of external variables such as temperature and salinity, the composition …

Identifying Sources Of Fecal Pollution In The Roanoke River, Roanoke County, Virginia, J. Brooks Crozier, Brian Clark, Holly Weber

Virginia Journal of Science

Antibiotic Resistance Patterns (ARPs) of Enterococcus spp. were used as a phenotypic fingerprint to compare and categorize unknown-source isolates in an impaired segment of the Roanoke River, Roanoke County, Virginia. Antibiotic resistance analysis (ARA) of enterococci has been effectively used to differentiate among sources of fecal contamination in many geographic regions in the United States. Enterococcus spp. were used as a fecal indicator in a library consisting of 1,562 known-source isolates. Two-way analysis indicated that approximately 95% of the unknown-source isolates collected were of animal origin. A 3-way analysis indicated that 61% of the unknowns were of livestock origin while …

Long Term Residual Effects Of A Nutrient Addition On A Barrier Island Dune Ecosystem, Susan M. Heyel

Biological Sciences Theses & Dissertations

In 1991, 150 m² were fertilized with nitrogen on three dunes on Hog Island, part of the Virginia Coast Reserve Long Term Ecological Research site, to examine plant community response to nitrogen addition. In 2000, the fertilized plots continued to exhibit a positive growth response. This study sampled the aboveground biomass, belowground biomass, and nutrient content of the experimental plots to examine the long- term patterns of nitrogen retention in a nitrogen limited system. Aboveground and belowground biomass was significantly greater in the fertilized plots than in the control plots. Aboveground biomass exhibited was significantly greater in control and …

The Transformation Of Iodate To Iodide In Marine Phytoplankton Cultures, George T. F. Wong, Ajcharaporn U. Piumsomboon, William M. Dunstan

OES Faculty Publications

Six species of phytoplankton, representing 6 major phylogenetic groups (2 oceanic species: a cyanobacteria, Synechococcus sp., and a coccolithophorid, Emiliania huxleyi; and 4 coastal species: a prasinophyte, Tetraselmis sp., the green algae Dunaliella tertiolecta, the diatom Skeletonema costatum and a dinoflagellate Amphidinium carterae) were tested for their ability to reduce iodate to iodide in batch cultures. They all did so to varying degrees. Thus, the reduction of iodate to iodide by phytoplankton may be a general phenomenon in the marine environment. At ambient concentrations of iodate, the rates of depletion of iodate and appearance of …

The Standardized Fish Bioassay Procedure For Detecting And Culturing Actively Toxic Pfiesteria, Used By Two Reference Laboratories For Atlantic And Gulf Coast States, Joann M. Burkholder, Harold G. Marshall, David W. Seaborn, Nora J. Deamer-Melia

Biological Sciences Faculty Publications

In the absence of purified standards of toxins from Pfiesteria species, appropriately conducted fish bioassays are the "gold standard" that must be used to detect toxic strains of Pfiesteria slop. from natural estuarine water or sediment samples and to culture actively toxic Pfiesteria. In this article, we describe the standardized steps of our fish bioassay as an abbreviated term for a procedure that includes two sets of trials with fish, following the Henle-Koch postulates modified for toxic rather than infectious agents. This procedure was developed in 1991, and has been refined over more than 12 years of experience in …

The Distribution Of Airborne Coal Dust In Soil Profiles Of Norfolk, Va And Its Implication For Arsenic Loading To These Soils, William Joseph Bounds

OES Theses and Dissertations

Norfolk, Virginia is home to the Northern Hemisphere's largest coal terminal the Lamberts Point Docks. The coal loading process of this terminal creates large amounts of coal dust, which subsequently is distributed throughout the local region by atmospheric transport and deposition. While the coal dust itself poses only minor health hazards, certain trace elements within the coal, particularly arsenic, may pose environmental as well as significant health hazards. Within coal, arsenic occurs primarily in the mineral pyrite. As pyrite in the coal dust is subsequently oxidized via exposure to the atmosphere and/or meteoric water, arsenic may be released to the …

A Comparison Of Phytoplankton Communities In Lake Prince And The Western Branch Reservoir, Suffolk, Virginia, Cara Marie Muscio

Biological Sciences Theses & Dissertations

Lake Prince and the Western Branch Reservoir are two eutrophic bodies of water located in Suffolk, Virginia. Lake Prince and its two small tributaries join the Western branch via a constructed spillway. This lake system is a source of water for the surrounding municipalities, and a recreational area for community citizens. In the past, these bodies of water had repeated incidents of low oxygen and nuisance algal blooms, particularly cyanobacteria species. As a result aerators have been installed in the main body of both Lake Prince and the Western Branch Reservoir. In addition, a pipeline has been installed from North …

Effects Of Human Disturbances On The Behavior Of Dabbling Ducks, Melissa Lynn Pease

Biological Sciences Theses & Dissertations

Disturbance of wintering and migrating birds by human activities can cause birds to expend energy in avoidance of humans and reduces the time available for resting and feeding at a time in the annual cycle when fat deposition and energy conservation are important. Also, human disturbances can effectively cause habitat loss by displacing birds from feeding or resting habitat. Managers of natural resources are increasingly faced with decisions about the types and amounts of public use that should be allowed without lowering the value of the resource for wildlife. In order for managers to make decisions about how to minimize …

Effects Of Collection, Transport, And Redeployment Methods On Natural Mortality Of Rangia Cuneata (Mactridae) Used In Biomonitoring Studies, Eugene G. Maurakis, David V. Grimes, William C. Gretes

Virginia Journal of Science

Sporadic, high mortality in test populations of wedge clams (Rangia cuneata) has limited the potential for using this otherwise desirable test organism in biomonitoring studies. To determine whether high mortality was due to ontogenic or experimental variables, a two-phased study was conducted. In phase I, mortality of collected and re-deployed wedge clams, subjected to varying transport conditions, was determined at 7, 14, 21 and 60 days re-deployment. The use of three transport times (1, 2, 3 hr.), two vehicle conditions (open, closed) and three transport treatments (open, closed, iced containers) yielded 18 test groups. Individual test group mortalities …

Growth Rate Variability And Lipofuscin Accumulation Rates In The Blue Crab Callinectes Sapidus, Se-Jong Ju, David H. Secor, H. Rodger Harvey

OES Faculty Publications

To better understand growth and age-pigment (lipofuscin) accumulation rates of the blue crab Callinectes sapidus under natural conditions, juveniles (33 to 94 mm carapace width) were reared in outdoor ponds for over 1 yr. Growth rates, measured by carapace width, during summer and fall exceeded all those reported in the literature; the initial carapace width of 59 ± 14 mm (mean ± SD) increased to 164 ± 15 mm within a 3 mo period. No growth occurred during winter months (November to April) at low water temperatures. Growth rates of crabs in ponds were substantially higher (von Bertalanffy growth parameter …

Hydrogeological Characterization Of The South Oyster Bacterial Transport Site Using Geophysical Data, Susan S. Hubbard, Jinsong Chen, John Peterson, Ernest L. Majer, Kenneth H. Williams, Donald J. Swift, Brian Mailloux, Yoram Rubin

OES Faculty Publications

A multidisciplinary research team has conducted a field-scale bacterial transport study within an uncontaminated sandy Pleistocene aquifer near Oyster, Virginia. The overall goal of the project was to evaluate the importance of heterogeneities in controlling the field-scale transport of bacteria that are injected into the ground for remediation purposes. Geochemical, hydrological, geological, and geophysical data were collected to characterize the site prior to conducting chemical and bacterial injection experiments. In this paper we focus on results of a hydrogeological characterization effort using geophysical data collected across a range of spatial scales. The geophysical data employed include surface ground-penetrating radar, radar …

Classification And Identification Of Pfiesteria And Pfiesteria-Like Species, Karen Steidinger, Jan Landsberg, R. William Richardson, Earnest Truby, Barbara Blakesley, Paula Scott, Patricia Tester, Torstein Tengs, Patrice Mason, Stever Morton, David Seaborn, Wayne Litaker, Kimberly Reece, David Oldach, Leonard Haas, Gerardo Vasta

Biological Sciences Faculty Publications

Dinoflagellates can be classified both botanically and zoologically; however, they are typically put in the botanical division Pyrrhophyta. As a group they appear most related to the protistan ciliates and apicomplexans at the ultrastructure level. Within the Pyrrhophyta are both unarmored and armored forms of the dominant, motile flagellated stage. Unarmored dinoflagellates do not have thecal or wall plates arranged in specific series, whereas armored species have plates that vary in thickness but are specific in number and arrangement. In armored dinoflagellates, the plate pattern and tabulation is a diagnostic character at the family, subfamily, and even genus levels. In …

Effects Of Elevated Atmospheric Co2 On Root Growth, Turnover And Decomposition In A Scrub Oak Ecosystem, John Joseph Dilustro

Biological Sciences Theses & Dissertations

Atmospheric carbon dioxide levels are increasing and predicted to double this century. The implications of this rise on vegetation structure and function are not well understood. Measurement of root growth response to elevated atmospheric carbon dioxide is critical to understanding soil carbon input. I investigated the effects of elevated carbon dioxide on fine root growth and decomposition using open top chambers with both ambient and elevated (700 PPM) CO₂ treatments in an oak-palmetto scrub ecosystem at Kennedy Space Center, Florida. Minirhizotron tubes were installed in each elevated and control chamber to allow observation of roots. Each tube was sampled …

Characterization And Identification Of A Sludge-Associated Bacterial Isolate, Abiodun O. Adibi, Derrell Mcpherson, Minna Laine

Virginia Journal of Science

During a metal speciation study, an unusually high retention of lead ·was observed when lead solution was percolated through a column packed with sludge compost obtained from Hampton Roads Sanitation department. A bacterium was isolated from the sludge compost and identified as Bacillus sphaericus using electron microscopy, whole cell fatty acid analysis (Midi System) and Biolog GP Microplate. The isolate grows in broth and agar media containing up to 800 µM lead. Lead accumulation study using atomic absorption spectrophotometer indicates that the isolate adsorbs lead. Lead adsorption is pH dependent. The isolate contains a plasmid of approximately 40 -50 kbp …

Benthic Community Analysis Of Hog Island Bay, Virginia, David James Lewis

Biological Sciences Theses & Dissertations

The benthic infaunal macroinvertebrate communities of Hog Island Bay of the Virginia Eastern Shore were quantitatively sampled at 30 locations on August 31 and September 1, 1995. The primary objectives of this study were: (1) to characterize the subtidal macroinfaunal benthic communities of Hog Island Bay, (2) to examine relationships between abiotic factors and the macroinfaunal communities and (3) to characterize the environmental condition of the system using the Benthic Index of Biotic Integrity (B-IBI) (Weisburg et al. 1997) and the EMAP Benthic Index for the Virginian Province (Strobel et al. 1995).

The ecological condition of Hog Island Bay appears …

Pcr And Fish Detection Extends The Range Of Pfiesteria Piscicida In Estuarine Waters, P. A. Rublee, J. Kempton, E. Schaefer, J.M. Burkholder, H. B. Glasgow Jr., David Oldach

Virginia Journal of Science

PCR and fluorescent in situ hybridization probes were used to assay for the presence of the dinoflagellate Pfiesteria piscicida in 170 estuarine water samples collected from New York to northern Florida. 20% of samples tested positive for the presence of P. piscicida, including sites where fish kills due to Pfiesteria have occurred and sites where there was no historical evidence of such events. The results extend the known range of P. piscicida northward to Long Island, New York. The results also suggest that P. piscicida is common, and normally benign, inhabitatant of estuarine waters of the eastern US.

Field Sampling And Necropsy Examination Of Fish, A. S. Kane, A. Baya, R. Reimschuessel, K. M. St. Pé, C. A. Poukish, C. P. Driscoll

Virginia Journal of Science

This paper presents an overview of observational and fish sampling tech­niques for investigating fish lesions, morbidity and mortality. These sam­pling techniques and investigations are much like detective work and require attention to detail, common sense, technical proficiency and experience. To solve the mystery of a fish kill, the investigator must use available evidence and clues to piece together a series of events that often have long since passed. The cause of these field events may be chemical, biological or physical; more often, it is some combination of these. An initial categorization approach may be used to reduce the great number …

Determination Of The N-Terminal Amino Acid Residues On Polypeptides In Secondary Wastewaters, Edward L. Creecy

Chemistry & Biochemistry Theses & Dissertations

The N-terminal amino acid residues on polypeptides and proteins were determined in wastewaters prior to chlorination. The terminal amino groups'ere first derivatized with the well known derivatizing agent dansyl chloride, and then the resulting dansyl amino acid hydrolyzed from the peptide chain by a propionic acid/ hydrochloric acid mixture. The resulting dansyl amino acids were then separated and detected using reversed phase high performance liquid chromatography with fluorescence detection. The majority of N-terminal residues detected were the more polar amino acids. Concentrations ranged from 1 x 10^-10 to 3 x 10^-7 moles/liter. It is suggested that the shorter …