Biodiversity Commons^™

Evaluating The Efficacy Of Land Snail Survey Techniques In Hawaii: Implications For Conservation Throughout The Pacific, Torsten Durkan, Norine Yeung, Wallace Meyer, Kenneth Hayes, Robert Cowie

Department of Biology Faculty Publications

Terrestrial micromolluscs (snails with an adult maximum shell dimension <5 mm) constitute a considerable proportion of the land snail fauna of the Pacific. However, micromolluscs are often underestimated in biological surveys because of size bias. It has been argued that visual searches are preferable on Pacific islands because: (1) size biases are limited based on the understanding that most native Pacific island land snails are very small, and (2) amount of labor is less than other methods such as soil surveys and adequate for inventory purposes (though not for abundance assessments). To test whether visual surveys and soil surveys were accurately recording all taxa, land snail inventories were completed in three forest reserves (5 sampling sites in each) on the island of Oahu, Hawaii. Visual surveys involved 30-min visual search in a 10 m2 site; soil surveys involved sieving leaf litter and topsoil from four 0.3 m2 quadrats and extracting snails with the aid of a microscope. The data indicate a size and microhabitat bias associated with both techniques. Visual surveys consistently collected large arboreal and litter-dwelling species but missed a significant portion of micromolluscs, while soil surveys collected micromolluscs but missed larger snails. Because of such biases, employing both methods is critical for collecting all taxa at a survey location. As such, we recommend that future land snail surveys on Pacific Islands incorporate both survey techniques. Obtaining a complete inventory is critical if we are to understand species distributions and patterns of diversity and make well-informed conservation recommendations.

A New Cave-Dwelling Millipede Of The Genus Scutogona From Central Portugal (Diplopoda, Chordeumatida, Chamaesomatidae), Ana Reboleira, Henrik Enghoff

Ana Sofia P.S. Reboleira

A new cave-dwelling species of the genus Scutogona Ribuat, 1913, S. minor n. sp., is described from caves of Sicó karst in central Portugal. The classification and delimitation of Scutogona vis-à-vis related genera, in particular Meinerteuma Mauriès, 1982, is discussed.

Variable Δ15n Diet-Tissue Discrimination Factors Among Sharks: Implications For Trophic Position, Diet And Food Web Models, Jill A. Olin, Nigel E. Hussey, Alice Grgicak-Mannion, Mark W. Fritts, Sabine T. Wintner, Aaron T. Fisk

Great Lakes Institute for Environmental Research Publications

The application of stable isotopes to characterize the complexities of a species foraging behavior and trophic relationships is dependent on assumptions of δ15N diet-tissue discrimination factors (∆15N). As ∆15N values have been experimentally shown to vary amongst consumers, tissues and diet composition, resolving appropriate speciesspecific ∆15N values can be complex. Given the logistical and ethical challenges of controlled feeding experiments for determining ∆ 15N values for large and/or endangered species, our objective was to conduct an assessment of a range of reported ∆ 15N values that can hypothetically serve as surrogates for describing the predator-prey relationships of four shark species …

Breeding Bird Communities Associated With Tallgrass Prairies In Southeast Nebraska, Stephen L. Winter, Samuel D. Fuhlendorf, Britt L. Smith

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

We collected data on bird communities associated with tallgrass prairies in two areas of southeast Nebraska that have been identified for focused conservation action: the Sandstone Prairies Biologically Unique Landscape (BUL) and the Southeast Prairies BUL. Our research was conducted in June and July of 2010 and 2011 at 14 privately–owned and state–owned properties located in Gage, Jefferson, Johnson, and Pawnee Counties (Nebraska). We detected a total of 1,108 individuals representing 41 species during 10–minute point counts with 400–m radii. The most commonly encountered species, in descending order of relative abundance (individuals detected per point count) were brown–headed cowbird, dickcissel, …

Pritchardia Boliviensis N. Gen., N. Sp. (Anoplocephalidae: Linstowinae), A Tapeworm From Opossums (Didelphidae) In The Yungas And Lowlands Of Bolivia And Atlantic Forest Of Paraguay, Scott Lyell Gardner, F. Agustín Jiménez Ruiz, Mariel L. Campbell

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

Pritchardia boliviensis n. gen. n. sp. (Anoplocephalidae: Linstowiinae) is described from marsupials (Marmosops noctivagus, Metachirus nudicaudatus, Gracilinanus sp.) collected in Bolivia and Paraguay. These cestodes have a very small strobila with only three segments, regularly alternating genital pores, genital ducts crossing excretory canals ventrally, ovoid to pyriform cirrus sac, three to five testes, external seminal vesicle present and separated from cirrus sac by long seminal duct surrounded by glandular material, uterus ephemeral, eggs forming rapidly in gravid segments, and seminal receptacle present. Pritchardia boliviensis n. sp. includes a single species that occurs in small marsupials in the family …

Sylvatic Species Of Echinococcus From Rodent Intermediate Hosts In Asia And South America, Scott Lyell Gardner, Altangerel T. Dursahinhan, Gábor R. Rácz, Nyamsuren Batsaikhan, Sumiya Ganzorig, David S. Tinnin, Darmaa Damdinbazar, Charles Wood, A. Townsend Peterson, Erika Alandia, José Luís Mollericona, Jorge Salazar-Bravo

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

During a global survey of the diversity of vertebrates and their parasites including the Gobi and desert/steppe biomes ranging from south central to western Mongolia, we found metacestodes (larvae) of Echinococcus multilocularis (Leuckart 1863) in the liver of an individual vole (Microtus limnophilus Büchner 1889) collected in grassland habitat at Har Us Lake, southeast of Hovd, Mongolia. Positive identification of E. multilocularis from near Hovd was made via comparative cyst morphology, study of hooks from the rostellum derived from protoscolexes, and DNA sequencing of the COX1 mitochondrial gene extracted from tissue of the cysts frozen in the field. This …

Mycological Study For A Management Plan Of A Neotropical Show Cave (Brazil), Erika Linzi Silva Taylor, Maria Aparecida De Resende Stoianoff, Rodrigo Lopes Ferreira

International Journal of Speleology

Caves are stable environments with characteristics favoring the development of microorganisms. The allocthonous input of organic matter and microbes into the warm Neotropical caves may favor the development of filamentous fungi, including pathogenic species. Histoplasma capsulatum is a pathogenic species commonly found in caves and associated with bat and bird guano. Many Brazilian caves have been historically visited due to scenic and religious tourism. The objective of this study was to perform a microbiology study for a management plan of a show cave in Brazil, focusing on the presence and distribution of pathogenic and opportunistic fungi in the cave. Statistics …

Unalienated Recognition At The Core Of Meaningful Exchange Between School And Community. A Response To "Unalienated Recognition As A Feature Of Democratic Schooling", Robin R. Sears

Democracy and Education

I apply the concept of unalienated recognition as a form of democratic exchange, introduced by Rheingold (2012), to a different educational setting. Through a case study of the School for Field Studies international environmental programs, that are, like Rheingold’s study school, field based and community centered, I explore the hypothesis that today’s undergraduate students’ desire to serve and to solve can be usefully harnessed in formal coursework and research to address real problems at their foundation. I link the cases by building on Rheingold’s use of the concept of boundary objects as an organizing principle behind the success in motivating …

Fringed Myotis (Myotis Thysanodes Pahasapensis): Species Conservation Assessment, Melissa J. Panella

Nebraska Game and Parks Commission: Publications

The primary goal in development of at-risk species conservation assessments is to compile biological and ecological information that may assist conservation practitioners in making decisions regarding the conservation of species of interest. The Nebraska Natural Legacy Project recognizes the fringed myotis (Myotis thysanodes pahasapensis) as a Tier I at-risk species. Provided are some general management recommendations regarding the fringed myotis. Conservation practitioners will need to use professional judgment to make specific management decisions based on objectives, location, and a multitude of variables. This resource was designed to share available knowledge of the fringed myotis that will aid in the decision-making …

Pasture Condition Guide For The Kimberley, Kathryn Ryan, Elizabeth Tierney, Paul Novelly, Robert Mccartney

Bulletins 4000 -

This interactive guide has been produced as a tool for assessing pasture condition over a range of pasture types in the Kimberley. A pasture type is a distinctive mix of plant species, soil type and landscape position. For example, the Mitchell Grass Alluvial Plain Pasture type is a mixture of Mitchell grasses and other species occurring on black soil alluvial plains. Pasture condition is an important factor affecting the potential of the rangelands for animal production and is a useful indicator for the sustainability of production.

Incorporating Satellite Derived Cloud Climatologies To Improve High Resolution Interpolation Of Daily Precipitation., Adam M. Wilson, Benoit Parmentier, Brian Mcgill, Rob Guralnick, Walter Jetz

Yale Day of Data

Conservation of biodiversity demands comprehension of evolutionary and ecological patterns and processes that occur over vast spatial and temporal scales. A central goal of ecology is to understand the factors that control the spatial distribution of species and this has become even more important in the face of climate change. However, at global scales there can be enormous uncertainty in environmental data used to model species distributions. Even ‘simple’ metrics such as mean annual precipitation are difficult to estimate in areas with few weather stations and available data sets do not quantify uncertainty in these surfaces. We are developing a …

The Tiger Genome And Comparative Analysis With Lion And Snow Leopard Genomes, Yun Sung Cho, Li Hu, Haolong Hou, Hang Lee, Jiaohui Xu, Soowhan Kwon, Sukhun Oh, Hak-Min Kim, Sungwoong Jho, Sangsoo Kim, Young-Ah Shin, Byung Chul Kim, Hyunmin Kim, Chang-Uk Kim, Shu-Jin Luo, Warren E. Johnson, Klaus-Peter Koepfli, A. Schmidt-Kunzel, Jason A. Turner, L. Marker, Cindy K. Harper, Susan M. Miller, Wilhelm Jacobs, Laura D. Bertola, Tae Hyung Kim, Sunghoon Lee, Qian Zhou, Hyun-Ju Jung, Xiao Xu, Priyvrat Gadhvi, Pengwei Xu, Yingqi Xiong, Yadan Luo, Shengkai Pan, Caiyun Gou, Xiuhui Chu, Jilin Zhang, Sanyang Liu, Jing He, Ying Chen, Linfeng Yang, Yulan Yang, Jiaju He, Sha Liu, Junyi Wang, Chul Hong Kim, Hwanjong Kwak, Jong-Soo Kim, Seungwoo Hwang, Junsu Ko, Chang-Bae Kim, Sangtae Kim, Damdin Bayarlkhagva, Woon Kee Paek, Seong-Jin Kim, Stephen J. O'Brien, Jun Wang, Jong Bhak

Biology Faculty Articles

Tigers and their close relatives (Panthera) are some of the world’s most endangered species. Here we report the de novo assembly of an Amur tiger whole-genome sequence as well as the genomic sequences of a white Bengal tiger, African lion, white African lion and snow leopard. Through comparative genetic analyses of these genomes, we find genetic signatures that may reflect molecular adaptations consistent with the big cats’ hypercarnivorous diet and muscle strength. We report a snow leopard-specific genetic determinant in EGLN1 (Met39>Lys39), which is likely to be associated with adaptation to high altitude. We also detect a …

Four Decades Of Andean Timberline Migration And Implications For Biodiversity Loss With Climate Change, David A. Lutz, Rebecca L. Powell, Miles R. Silman

Dartmouth Scholarship

Rapid 21st-century climate change may lead to large population decreases and extinction in tropical montane cloud forest species in the Andes. While prior research has focused on species migrations per se, ecotones may respond to different environmental factors than species. Even if species can migrate in response to climate change, if ecotones do not they can function as hard barriers to species migrations, making ecotone migrations central to understanding species persistence under scenarios of climate change. We examined a 42-year span of aerial photographs and high resolution satellite imagery to calculate migration rates of timberline–the grassland-forest ecotone–inside and outside of …

Review Of Report On The “Status Of Nearshore Finfish Stocks In South-Western Western Australia: Australian Herring And Tailor”, Department Of Fisheries

Fisheries occasional publications

No abstract provided.

Food, Parasites, And Epidemiological Transitions: A Broad Perspective, Karl Reinhard, Luis Fernando Ferreira, Françoise Bouchet, L. Sianto, J. M.F. Dutra, A. Iniguez, Daniela Leles, M. Le Bailley, Martín Horacio Fugassa, Elisa Pucu, Adauto Araújo

Karl Reinhard Publications

Pathoecology provides unique frameworks for understanding disease transmission in ancient populations. Analyses of Old and New World archaeological samples contribute empirically to our understanding of parasite infections. Combining archaeological and anthropological data, we gain insights about health, disease, and the way ancient people lived and interacted with each other and with their environments. Here we present Old and New World parasite evidence, emphasizing how such information reflects the different ways ancient populations exploited diverse environments and became infected with zoonotic parasites. It is clear that the most common intestinal helminthes (worm endoparasites) were already infecting ancient inhabitants of the New …

Traversing Swanton Road, 13th Ed., James A. West

Academic, Government & Associated Organizational Research Resources

Situated at the northwest end of Santa Cruz County and occupying circa 30 square miles of sharply contrasted terrain, the Scott Creek Watershed concentrates within its geomorphological boundaries, at least 10-12% of California's flora, both native and introduced. Paradoxically, the use/abuse that the watershed has sustained over the past 140+ years, has not necessarily diminished the biodiversity and perhaps parallels the naturally disruptive but biologically energizing processes (fire, flooding, landslides and erosion), which have also been historically documented for the area for +60 years. This is an early edition of an extensive document by James A. West. Please visit the …

Diatom Assemblages Promote Ice Formation In Large Lakes, N. A. D'Souza, Y. Kawarasaki, J. D. Gantz, R. E. Lee, B. F.N. Beall, Y. M. Shtarkman, Z. A. Koçer, S. O. Rogers, H. Wildschutte, G. S. Bullerjahn, R. M.L. Mckay

Great Lakes Institute for Environmental Research Publications

We present evidence for the directed formation of ice by planktonic communities dominated by filamentous diatoms sampled from the ice-covered Laurentian Great Lakes. We hypothesize that ice formation promotes attachment of these non-motile phytoplankton to overlying ice, thereby maintaining a favorable position for the diatoms in the photic zone. However, it is unclear whether the diatoms themselves are responsible for ice nucleation. Scanning electron microscopy revealed associations of bacterial epiphytes with the dominant diatoms of the phytoplankton assemblage, and bacteria isolated from the phytoplankton showed elevated temperatures of crystallization (T c) as high as -3 °C. Ice nucleation-active bacteria were …

A Glyptosaurine Lizard From The Eocene (Late Uintan) Of San Diego, California, And Implications For Glyptosaurine Evolution And Biogeography, David Moscato

Electronic Theses and Dissertations

Glyptosaurinae is an extinct subfamily of lizards of the family Anguidae. Glyptosaurine lizards are known exclusively from the Paleogene of North America and Eurasia, reaching their peak of diversity and distribution in the Eocene. In North America these lizards are largely restricted to the intermontane basins along the Rocky Mountain range, with only sparse, indeterminately-identified skeletal elements known from outside of this region. Glyptosaurine lizards are split into two tribes: the monophyletic Glyptosaurini and paraphyletic “Melanosaurini”. Within Glyptosaurini, the most common and widespread genus is Glyptosaurus. In this study I describe a new specimen assignable to G. sylvestris, …

Oral Presentation Abstracts By Day And Symposium From The 11th International Mammalogical Congress (Belfast, Northern Ireland : August 11-16, 2013), International Mammalogical Congress

University of Nebraska State Museum: Mammalogy Papers

About IMC

IMC returns to Europe after 24 years at a time when IUCN has identified 25% mammal species as at risk. As a venue to share concerns, concepts and techniques among professional mammalogists, IMC has never been more relevant. IMC11 Organising Committee hopes to welcome colleagues with diverse interests in the biology, conservation and management of mammals from throughout the world. IMC11 will encourage active participation in the Congress program by maximising time for spoken papers and posters offered by delegates.

Queen's University Belfast is the venue and are pleased to host the 11th International Mammalogical Congress on behalf …

Leatherback Hatchling Fitness, Violet Campbell, Shane Morales, Kelly Stewart

STAR Program Research Presentations

Leatherback hatchling fitness on land is essential for their success in entering the ocean without being predated. Two ways fitness on land may be measured are by how fast hatchlings crawl as well as how fast their righting responses are when they are flipped onto their carapaces. Hatchlings from certain nests have slower righting response times along with slower crawl times, both of which would increase the odds of predation and hinder the success of hatchlings reaching the ocean.

Hatchling crawling speed was determined by timing 12 randomly selected hatchlings from each nest to crawl a distance of two meters. …

Systematics, Climate, And Ecology Of Fossil And Extant Nyssa (Nyssaceae, Cornales) And Implications Of Nyssa Grayensis Sp. Nov. From The Gray Fossil Site, Northeast Tennessee, Nathan R. Noll

Electronic Theses and Dissertations

The Late Hemphillian (latest Miocene or earliest Pliocene, 7-4.5 Ma) Gray Fossil Site in northeastern Tennessee is interpreted to represent a lacustrine paleokarst fed by a river or stream. This research focuses on the morphological and systematic relations of Nyssa endocarps (fruit pits) from the fossil site to extinct and extant Nyssa species. A combination of metric and nonmetric traits allows recognition of a new species: Nyssa grayensis sp. nov. This fossil species shares the most similarities with the extant Nyssa ogeche Bartram ex Marshall from southeast North America and the Eocene fossil Nyssa eolignitica Berry from western Tennessee. Affinities …

Trends In Borrelia Spp. Prevalence In Ixodes Spp. Ticks From The Southeastern Coastal United States, Lauren Paul Maestas

Masters Theses

The Lyme borreliosis (LB) cycle, involving Ixodes scapularis and Borrelia burgdorferi sensu stricto (Bbss), is well documented in the northeastern US, where LB is becoming increasingly prevalent. In coastal North Carolina, I. affinis has been shown to have a higher incidence of Bbss than I. scapularis. My objectives were, to assess changes in prevalence of Bbss in Ixodes spp. along a transect from Virginia to Florida, and to assess the value of dogs and mesomammals as sentinels for spread of Borrelia burgdorferi sensu lato.

Ixodes spp. were collected at sites from 37.4^o N to 30.0^{o …}

Comparative Microbial Community Composition From Secondary Carbonate (Moonmilk) Deposits: Implications For The Cansiliella Servadeii Cave Hygropetric Food Web, Annette Summers Engel, Maurizio G. Paoletti, Mattia Beggio, Luca Dorigo, Alberto Pamio, Tiziano Gomiero, Claudio Furlan, Mauro Brilli, Angelo Leandro Dreon, Roberto Bertoni, Andrea Squartini

International Journal of Speleology

The microbial diversity of moonmilk, a hydrated calcium carbonate speleothem, was evaluated from two Italian caves to provide context for the food web of highly-specialized troglobitic beetles, Cansiliella spp. (Leptodirinae), with distinctive carbon and nitrogen isotope values indicative of a novel food source. The moonmilk and associated percolating waters had low to no extractable chlorophyll, with an average organic C:N ratio of 9, indicating limited allochthonous input and a significant contribution from microbial biomass. The biomass from moonmilk was estimated to be ~10⁴ micro- and meiofaunal individuals per m² and ~10⁷ microbial cells/ml. Betaproteobacteria dominated the …

Structure Of An Ensemble Of Insectivorous Bats, Matthew A. Emrich

Electronic Thesis and Dissertation Repository

Ensembles of species show distinct characteristics that may permit resource partitioning but few studies focus on more than one or two traits. Using seven sympatric Jamaican bats, I examined features which could allow for spatial, temporal, behavioural and dietary partitioning including wing morphology, echolocation characteristics, flight behaviour, habitat use, and diet. Using acoustic arrays I compared activity patterns at different sites to determine temporal and spatial partitioning and generated flight paths to determine flight speeds. From captured bats I measured wing morphology to examine morphological differences and did genetic analysis of guano to determine dietary partitioning. Morphology, call structure and …

Examining Gradients In Novelty: Native And Non-Native Fish Assemblages In Everglades Canals, David A. Gandy

FIU Electronic Theses and Dissertations

Novel ecosystems emerge from alterations to historic abiotic regimes and contain new species combinations. Everglades canals offer an opportunity to understand the function of novel habitat for native and non-native fishes and how novel conditions in turn influence distribution, abundance and assembly patterns. I examined native and non-native fish assemblages collected across a gradient in novelty, defined by the loss of wetland connectivity and habitat complexity. As novelty increased, native species richness and abundance strongly declined, and the contribution of non-natives increased. Community structure vastly differed among canals and was strongly influenced by spatial factors and secondarily by hydrological factors. …

The Birds Of Nebraska, Revised Edition 2013, Paul A. Johnsgard

Zea E-Books Collection

This summary of the birds of Nebraska has been restricted to those species that have been convincingly reported at least once in Nebraska from historic time to the present. It has also been modified in its current revision to conform very closely in that regard to the most recent Nebraska Ornithologists’ Union’s “Official List of the Birds of Nebraska” (Brogie, 2010; NOU Records Committee, 2011 and annual updates). The N.O.U.’s official state list of birds (455 species as of 2013, including 329 “regular” species, 42 of “casual” occurrence, 68 accidentals, and six extinct or extirpated species) is based on actual …

Wolf Reintroduction Into Yellowstone National Park, Erin Quartley

The Review: A Journal of Undergraduate Student Research

In lieu of an abstract, below is the essay's first paragraph.

" ... My, what big eyes you have grandmother. 'All the better to see you with, my dear.' My, what big teeth you have grandmother. 'All the better to eat you with, my dear. ' ... " The story of Little Red Riding Hood is one that commonly surfaces when people talk about and picture wolves. The negative image that has been placed upon wolves originates from folklore, fairy tales, and Hollywood. This same falsified image is one that has greatly contributed to the past and present plight of …

Global Cities Are Coastal Cities Too: Paradox In Sustainability?, Herman L. Boschken

Herman L. Boschken

Worldwide, most global cities are located in coastal zones, but a paradox of sustainability is especially striking for American global cities. This article examines such paradox drawn between globalization-induced development and coastal ecosystems. It focuses on two developmental components found principally in global cities: (1) the agglomeration of foreign waterborne commerce and global business services and (2) the accelerated activity and mobility habits of a global professional class. Despite formidable gaps in research, some anecdotal evidence suggests unique hazards exist for the coastal ecology as globalization pressures expand a global city’s urban footprint.

Birds And Birding In Wyoming’S Bighorn Mountains Region, Jacqueline L. Canterbury, Paul A, Johnsgard, Helen F. Downing

Zea E-Books Collection

The Bighorn Mountains consist of a relatively well-isolated north-south mountain range in north-central Wyoming that had their origins during the early Cenozoic era, 50-65 million years ago. The present-day Bighorn range is more than 100 miles in length and has a maximum elevation of 13,167 feet (Cloud Peak), only slightly less than the highest peak in Wyoming (Gannett Peak, at 13,804 feet). The mountains are flanked to the west by the Bighorn River basin, and to the east by the Powder River basin, both of which support only semi-desert vegetation dominated by sagebrush. Elevations of the Powder River basin near …

Multiple Approaches For Assessing Mangrove Biophysical And Biochemical Variables Using In Situ And Remote Sensing Techniques, Francisco Javier Flores De Santiago

Electronic Thesis and Dissertation Repository

Mangrove forests are important ecosystems and play a key role in maintaining the equilibrium in coastal lagoons and estuaries. However, in recent years, there has been a considerable loss of mangrove extension due to anthropogenic activities. Recent studies suggest that multiple in situ and remote sensing approaches must be carried out to understand the dynamics in these complex ecosystems. Therefore, the objective for this PhD dissertation is to develop multiple techniques for monitoring the seasonal biophysical and biochemical conditions of the mangrove forests. Particular objectives will include: i. Test the feasibility of using a Chlorophyll Content Index from a …