Aquaculture and Fisheries Commons^™

Modeling Environmental Effects On Msx Prevalence And Intensity In Eastern Oyster (Crassostrea Virginica) Populations, Michelle Christine Paraso

OES Theses and Dissertations

An oyster population model coupled with a model for Haplosporidium nelsoni, the causative agent of the oyster disease MSX, was used with salinity time-series constructed from Delaware River flow measurements to study environmentally-induced variations in the annual cycle of this disease. Simulations with this model were designed to investigate the effect of increased or decreased spring freshwater discharge, the timing of high freshwater runoff, the presence or absence of a fall or late spring phytoplankton bloom, and the occurrence of a warm winter on MSX prevalence and intensity in Delaware Bay oyster populations. Model simulations for the lower Bay site …

Understanding The Success And Failure Of Oyster Populations: The Importance Of Sampled Variables And Sample Timing, Thomas M. Soniat, Eric N. Powell, Eileen E. Hofmann, John M. Klinck

CCPO Publications

One of the primary obstacles to understanding why some oyster populations are successful and others are not is the complex interaction of environmental variables with oyster physiology and with such population variables as the rates of recruitment and juvenile mortality. A numerical model is useful in investigating how population structure originates out of this complexity. We have monitored a suite of environmental conditions over an environmental gradient to document the importance of short time-scale variations in such variables as food supply, turbidity, and salinity. Then, using a coupled oyster disease population dynamics model, we examine the need for short rime-scale …

Trace Element Signatures In Otoliths Record Natal River Of Juvenile American Shad (Alosa Sapidissima), Simon R. Thorrold, Cynthia M. Jones, Steven E. Campana, James W. Mclaren, Joseph W. H. Lam

OES Faculty Publications

The elemental composition of fish otoliths may represent a permanent record of the environmental conditions an individual has experienced as trace elements, incorporated into the growing surface of the otolith, reflect the physical and chemical characteristics of the ambient water. We tested the utility of trace element signatures in otoliths as natural tags of the river of origin of juvenile American shad (Alosa sapidissima) collected from the Connecticut, Hudson and Delaware Rivers in August and October 1994. Four elements (K, Mn, Sr, and Ba) showed significant variability among sites within rivers in August, although only Mg showed a …

Mark-Recapture Creel Survey And Survival Models, Shampa Saha

Mathematics & Statistics Theses & Dissertations

In this dissertation, we consider a model based approach to the estimation of exploitation rate of a fish population by combining mark-recapture procedures with a creel survey. We also consider the analysis of a proportional hazards survival model for randomly censored observations, known as the Koziol-Green model. The model assumes that the lifetime survivor function is a power of the censored time survivor function.

In Chapter 2, we introduce the model based approach to the estimation of the exploitation rate of a fish population by combining mark-recapture procedures with a creel survey. We assume that in the beginning of a …

Yield-Per-Recruit Analysis And Management Strategies For Atlantic Croaker, Micropogonias Undulatus, In The Middle Atlantic Bight, Luiz R. Barbieri, Mark E. Chittenden, Cynthia M. Jones

OES Faculty Publications

The effect of different fishing mortality (F) and natural mortality (M), and age at first capture (t(c)) on yield-per-recruit of Atlantic croaker, Micropogonias undulatus, in the lower Chesapeake Bay and North Carolina were evaluated with the Beverton-Holt model. Independent of the level of M (0.20-0.35) or F (0.01-2.0) used in simulations, yield-per-recruit values for Chesapeake Bay were consistently higher at t((c)) = 1 and decreased continuously with increases in t(c) (2-5). Although maximum yield-per-recruit always occurred at the maximum level off (F=2.0), marginal increases in yield beyond F = 0.50-0.75 were negligible. Current F (F(CUR)) is estimated to be …

Age And Growth Of Larval And Juvenile Atlantic Croaker, Micropogonias Undulatus, From The Middle Atlantic Bight And Estuarine Waters Of Virginia, Stephen W. Nixon, Cynthia M. Jones

OES Faculty Publications

Sagittal otoliths were used to determine age and growth of 605 larval and juvenile Atlantic croaker, Micropogonias undulatus, collected in the Middle Atlantic Bight and estuarine waters of Virginia. This study is the first to use age-based analysis for young Atlantic croaker collected in this region. A Laird-Gompertz model (r2=0.95) was used to describe the growth of Atlantic croaker up to 65 mm standard length (SL) and 142 days (t): SL((t)) = 2.657 exp (4.656 [1-exp (-0.0081t)]); where SL((t)) = standard length at day t. Spatial and temporal patterns in the size and age of Atlantic croaker showed a …

Response Of Otolith Microchemistry To Environmental Variations Experienced By Larval And Juvenile Atlantic Croaker (Micropogonias Undulatus), Simon R. Thorrold, Cynthia M. Jones, Steven E. Campana

OES Faculty Publications

Minor and trace elements incorporated into otoliths during growth may permanently record environmental conditions experienced by fishes. To determine the validity of this approach, we used laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS) to assay sectioned otoliths from juvenile Atlantic croaker (Micropogonias undulatus) collected from each of three sites in the Neuse River, North Carolina, and the Elizabeth River, Virginia. Elemental concentrations at the center of the otoliths did not differ between locations, although both Mg : Ca and Ba : Ca were significantly higher at the edge of otoliths from the Neuse River than from the …

Recruitment Of Blue Crab, Callinectes Sapidus, Postlarvae To The Back-Barrier Lagoons Of Virginia's Eastern Shore, Robert D. Brumbaugh

OES Theses and Dissertations

Most research on the early life history of the blue crab, Callinectes sapidus, has been conducted in large partially stratified estuaries such as the Chesapeake Bay. In contrast, little is known about the recruitment dynamics or habitat requirements of blue crab postlarvae (megalopae) in shallow well-mixed lagoonal systems that make up a considerable part of the species' range. In Virginia's coastal lagoons, planktonic blue crab megalopae are most abundant at night on flooding tides, and are not abundant during the daytime or on ebbing tides. This appears to enhance retention within the lagoons, despite the short residence time of water …

Fisheries And Oceanography Off Galicia, Nw Spain: Mesoscale Spatial And Temporal Changes In Physical Processes And Resultant Patterns Of Biological Productivity, K. R. Tenore, M. Alonsonval, L. P. Atkinson, J. M. Cabanas, R. M. Cal, H. J. Campos, F. Castillejo, E. J, Chesney, N. Gonzalez, R. B. Hanson, C. R. Mcclain, A. Miranda, M. R. Roman, J. Sanchez, G. Santiago, L. Valdes, M. Varela, J. Yoder

CCPO Publications

The Galician shelf off NW Spain (43N degrees 9W degrees) exhibits mesoscale spatial and temporal changes in biological productivity associated with upwelling. Spatial heterogeneity results from local geomorphic and land-sea interactions superimposed on the large scale atmospheric processes that produce upwelling. Wind-induced upwelling events, commonly of short (i.e., week) duration, are more common in the summer than in the winter. A Series of cruises, including some time series sampling, and satellite imagery analysis showed that surface upwelling was more common and persistent on the northern coast compared with the western coast off the coastal embayments, the Rias Bajas. Nearshore off …

Methods For The Comparison Of Timing Behavior Applied To The Pink Salmon Fisheries Of Prince William Sound, Alaska, Louis J. Rugolo

OES Theses and Dissertations

Harvest control in salmonid fisheries was examined as a problem in the formulation of regulations which restrict time and area of fishing. An ability to rigorously define and compare the form of the progression of migration across time and between harvest areas was judged fundamental to objective harvest decisions. Identification and evaluation of statistical methods appropriate to the comparison of empirical migratory time densities was performed.

The development of the measure of central tendency (mean date) of the time density as the consistent, unbiased estimator of migratory behavior was given. Practical evidence demonstrated that the mean date was highly resistant …

Modeling Oyster Populations Ii. Adult Size And Reproductive Effort, E. E. Hofmann, J. M. Klinck, E. N. Powell, S. Boyles, M. Ellis

CCPO Publications

A time-dependent model of energy flow in post-settlement oyster populations is used to examine the factors that influence adult size and reproductive effort in a particular habitat, Galveston Bay, Texas, and in habitats that extend from Laguna Madre, Texas to Chesapeake Bay. The simulated populations show that adult size and reproductive effort are determined by the allocation of net production to somatic or reproductive tissue development and the rate of food acquisition, both of which are temperature dependent. For similar food conditions, increased temperature reduces the allocation of net production to somatic tissue and increases the rate of food acquisition. …

Modeling Oyster Populations. Iv. Rates Of Mortality, Population Crashes, And Management, E. N. Powell, J. M. Klinck, E. E. Hofmann, S. M. Ray

CCPO Publications

A time-dependent energy-flow model was used to examine how mortality affects oyster populations over the latitudinal gradient from Galveston Bay, Texas, to Chesapeake Bay, Virginia. Simulations using different mortality rates showed that mortality is required for market-site oysters to be a component of the population's size-frequency distribution; otherwise a population of stunted individuals results. As mortality extends into the juvenile sizes, the population's size frequency shifts toward the larger sizes. In many cases adults increase despite a decrease in overall population abundance. Simulations, in which the timing of mortality varied, showed that oyster populations are more susceptible to population declines …

Description, Distribution, And Abundance Of The Blue Crab, Callinectes Sapidus (Rathbun), Spawning Stock Of The Lower Chesapeake Bay, Patrick John Geer

OES Theses and Dissertations

The lower Chesapeake Bay spawning stock of the blue crab, Callinectes sapidus, (Rathbun), is examined for seven years (1986 - 1992) in an attempt to better understand stock behavior. Three methods of post-stratification are used to describe the distribution and movement of the population over time. The three methods, density strata, geographic zones, and depth strata, did well in explaining movements of the population, indicating a trend of increased concentration of blue crabs near the eastern Bay late in the spawning season - October. The data suggest a bimodal period of spawning and a trimodal period of abundance. The …

Age, Growth, And Mortality Of Atlantic Croaker, Micropogonias Undulatus, In The Chesapeake Bay Region, With A Discussion Of Apparent Geographic Changes In Population Dynamics, Luiz R. Barbieri, Mark E. Chittenden Jr., Cynthia M. Jones

OES Faculty Publications

Atlantic croaker, Micropogonias undulatus, collected from commercial catches in Chesapeake Bay and in Virginia and North Carolina coastal waters during 1988-1991 (n=1,967) were aged from transverse otolith sections. Ages 1-8 were recorded, but eight-year-old fish were rare. Marginal increment analysis showed that for ages 1-7, annuli are formed once a year during the period April-May. Otolith age readings were precise: >99% agreement within and between readers. Observed lengths-at-age were highly variable and growth rate decreased after the first year. Despite the high variability in sizes-at-age, observed lengths for ages 1-7 fit the von Bertalanffy growth model (r2=0.99; n=753) well. …

Age, Growth, And Reproduction Of Tautog Tautoga Onitis (Labridae: Perciformes) From Coastal Waters Of Virginia, E. Brian Hostetter, Thomas A. Munroe

Biological Sciences Faculty Publications

Tautog Tautoga onitis are gaining popularity in Virginia's coastal waters as a recreational and food fish. Adult tautog are seasonally abundant on inshore hard-bottom habitats (1-10 m) and inhabit offshore areas (10-75 m) year-round. Juveniles, especially newly-settled recruits, inhabit vegetated areas in shallow water (usually < 1 m). From March 1979 to July 1986, tautog were collected in lower Chesapeake Bay and nearby coastal waters to examine age, growth, and sexual maturation. Age estimates were determined from annular marks on opercle bones: 82% of the fish were age-10 or younger, 18% exceeded age-10, and 1% were age-20 or older. Marginal increment analysis revealed that annuli formed concurrent with a protracted spawning season (April-July). The von Bertalanffy growth equation, derived from back-calculated mean lengths-at-age, was l(t) = 742 [1-e-0.085 (t-1.816)]. Tautog are long-lived (25+ yr) and attain relatively large sizes (672 mm TL) slowly (K for sexes combined = 0.085). Growth rates of both sexes are similar, although males grow slightly faster (K = 0.090 vs. 0.085 for females). Maturity occurs at age-3 in both sexes. Growth rates for tautog from Virginia are similar to those reported nearly 25 years ago for tautog in Rhode Island. Growth rates for tautog are similar to those of other reef fishes, such as snappers and groupers. Habitat restriction, slow growth, great longevity, and increasing popularity by user groups may contribute to over-exploitation of this species in Virginia waters.

Spatial And Temporal Occurrence Of Spanish Mackerel Scomberomorus Maculatus In Chesapeake Bay, Mark E. Chittenden Jr., Luiz R. Barbieri, Cynthia M. Jones

OES Faculty Publications

No abstract provided.

Computer Simulation Techniques To Assess Bias And Precision In The Roving Creel Survey Estimator, David L. Wade

Biological Sciences Theses & Dissertations

Fisheries scientists use roving creel survey methods to estimate total catch and total effort of recreational fisheries. Bias in the roving creel estimators had been known to the scientific community, but it had not been quantified. I developed a roving-creel-survey computer simulation model to investigate the bias and precision of roving creel estimators, and estimated parameters for the model based on field observations from the blue crab (Callinectes sapidus) fishery of the Chesapeake Bay. The computer model was used to identify bias in roving-creel effort and catch estimators and to demonstrate survey methods that will reduce this bias. …

The Effects Of Two Polycyclic Aromatic Hydrocarbons Benzo[A]Pyrene And Naphthalene On Reproductive Success Embryological Development Larval Physiology And Mortality Of The Mud Crab Rhithropanopeus Harisii (Gould), Gregory V. White

OES Theses and Dissertations

Polycyclic aromatic hydrocarbons (PAHs) such as naphthalene (Nap) and benzo[a]pyrene (B[a]P) are common in the water column and sediments of estuarine and coastal areas. The mud crab Rhithropanopeus harrisii was exposed to varying concentrations of Nap or B[a]P to determine the effects on reproductive success, embryological development, larval physiology and mortality. Nap and B[a]P decreased hatching success and prolonged embryological development. Both pollutants produced high abnormality frequencies for egg exposed larvae. Molt frequency and respiratory rates of larvae from non-exposed eggs were more chronically affected by these pollutants than were egg exposed larvae. The EC₅₀ concentrations were determined for …

Estimates Of Spawning Stock Size Of Blue Crab, Callinectes Sapidus, In Chesapeake Bay, 1986-1987, Cynthia M. Jones, John R. Mcconaugha, Patrick J. Geer, Michael H. Prager

OES Faculty Publications

The 1986 spawning stock exhibited a single abundance peak, increasing from 1.0×105 individuals in early July to 9.3×106 in late July, maintaining high levels throughout the summer, and declining in the fall to 7.4×105 individuals. The 1987 spawning stock showed 2 peaks of abundance. The population reached the lesser peak, 1.0×106 individuals, in late July; the greater peak, 1.5×106, in late August. By late September, the population had declined to 6.5×105 individuals. The peak abundance of the 1987 female spawning stock was only 16% as great as the peak abundance in 1986; the 1987 spawning stock size in 1986. Variability …

Fecundity Of Blue Crab, Callinectes Sapidus, In Chesapeake Bay: Biological, Statistical And Management Considerations, Michael H. Prager, John R. Mcconaugha, Cynthia M. Jones, Patrick J. Geer

OES Faculty Publications

Ovigerous blue crabs were collected from the mouth of Chesapeake Bay during the 1986 and 1987 spawning seasons. Mean carapace width was 14.7 cm; mean fecundity was 3.2×106 eggs. Fecundity was significantly related to carapace width, and did not vary significantly with developmental stage of the eggs. Mean fecundities were 2.6×106 eggs in 1986, and 4.0×106 eggs in 1987. An additive model with year and size effects described the observed fecundities reasonably well, was compact, and was easier to interpret than a multiplicative model. To fit a more general model without year effects, the authors took the mean of 1986 …

The Temporal And Spatial Distribution Of Blue Crab Larvae On The Mid-Atlantic Bight Adjacent To The Chesapeake Bay, 1982-1983, Lyle Michael Varnell

OES Theses and Dissertations

Recruitment processes are important information for the management of commercially and recreationally exploited marine species. Recruitment processes of the Chesapeake Bay's most important commercial and recreational species, the blue crab, are unknown, due in part to the lack of knowledge of the processes directly preceeding recruitment.

The present study was undertaken to investigate and explain the movement and developmental patterns of blue crab larvae while offshore. Interannual and intraseasonal variations of these patterns were also examined.

Sampling occurred from May to November during 1982 and 1983. Larvae were collected at three depths (neuston layer (upper 10 cm), one meter and …

Growth Potential Of Young Black Sea Bass, Centropristis Striata, In Artificial Environments, Joung Won Kim

OES Theses and Dissertations

The growth potential of the commercially important marine finfish, black sea bass (Centropristis striata), was examined for aquaculture under controlled conditions. The effect of food and body weight on growth was evaluated using juveniles and young black sea bass cultured with a natural diet and a commercial diet at various feeding levels.

Growth was affected by type of food, food consumption rate, and fish body weight. For fish having positive weight gain, absolute growth rate (gram/day) increased exponentially as food consumption rate (percent of body weight per day) and/or body weight increased. Instantaneous growth rate (percent of body weight per …

A Comparison Of Potential Fishing Methods Associated With Fish Aggregating Devices Off The Northeast Coast Of Puerto Rico, Alan M. Friedlander

OES Theses and Dissertations

Six fish aggregating devices (FADs) were deployed in June and monitored through December 1986. Emphasis was placed on trolling, live-bait handlining and longlining.

There was a significant difference (x2 = 7.815, pCoryphaena hippurus) which made up 64.2% of the catch.

Handlining at night around inshore buoys for one boat yielded 82.7 kg per trip. Pelagic fish comprised 83.9% of the catch, with the majority (81.4%) being kingfish (Scomberomorous cavalla). Catch rates were 50% higher and the species diversity much greater on the FADs versus control during experimental nightfishing, but the difference was not significant.

Longlining resulted in 3.4 …

Validation Of The Otolith Increment Aging Technique For Striped Bass, Morone Saxatilis, Larvae Reared Under Suboptimal Feeding Conditions, Cynthia Jones, Edward B. Brothers

OES Faculty Publications

Striped bass, Morone saxatilis, larvae were reared in the laboratory for 97 days to validate the otolith increment aging technique for this species. Otolith-increment deposition rates were determined under optimal laboratory conditions for growth and under three conditions of restricted feeding and using both light and scanning electron microscopy (SEM). Under optimal laboratory conditions. increments were deposited daily from the fourth day after hatching through the first 2 months of life and were discernible with the light microscope. For larvae reared under restricted feeding regimes and readings done with the light microscope, counts did not reflect true age. Counts …

The Spatial And Temporal Distribution Of The Larvae Of Sympatric Pagurid Hermit Crabs (Decapoda, Anomura) In Virginian Estaurine And Coastal Waters, Philip Wesley Sadler

OES Theses and Dissertations

Thirteen stations were occupied at two - week intervals from May through September 1980 within the York River, lower Chesapeake Bay depths encompassing the entire water column.

Three species of pagurids were identified: Pagurus longicarpus, P. pollicaris, and P. annulipes. The larvae of P. annulipes had not been previously identified from Virginian waters. The shapes of the antennae of P. pollicaris and P. annulipes weredistinctive, allowing rapid identification of these larvae. The shapes of the uropods were found to be useful in distinguishingthe glaucothoe· of P. longicarpus from P. annulipes. The larvae of these species …

An Intraseason Forecasting System For Commercial Marine Fisheries, Erik J. Barth

OES Theses and Dissertations

The reliability of an intraseason yield estimation technique which is commonly used by Pacific salmon harvest managers is evaluated for applicability to a variety of commercial finfish and crustacean fisheries. The estimation technique is known as the average timing or the average performance model. The method is not easily related to standard statistical models, but does show some similarity to both a single parameter linear regression model and the ratio estimator of sampling theory. A comparison of these models, a two parameter linear model, and a regression estimator is made to determine if the precision of forecasts of performance can …

Timing Of The Blue Crab Fisheries Of Virginia And Its Application To Harvest Management, J. Dale Shively

OES Theses and Dissertations

The timing of a fishery is a quantitative expression of the composite behaviors of harvesters, markets, animals and climatic events. A quantitative description of the timing of the blue crab (Callinectes sapidus) fisheries of Virginia was established using the time density model of Mundy (1979). Blue crab catch statistics supplied by the National Marine Fisheries Service and the Virginia Marine Resource Commission were divided into two fisheries based on gear type; the summer and winter fisheries. Average performance curves were then constructed using average cumulative proportions of catch. Annual yield estimates were also made and timing in five …

Determinants For The Timing Of Escapement From The Sockeye Salmon Fishery Of The Copper River, Alaska: A Simulation Model, Howard A. Schaller

OES Theses and Dissertations

A model to estimate determinants for migratory timing of catch and escapement in a terminal salmon fishery is presented. A method was developed to estimate average seasonal migration rates of salmon through a harvest area from catch and escapement data. The time series for the total population of Copper River sockeye salmon (Oncorhynchus nerka) was reconstructed in the reference frame of the commercial harvest area from catch and escapement data.

The catchability coefficients (q), derived from the reconstructed populations were found to vary within season and between seasons. The relation between q and effort was attributed to a …

An Examination Of The Variability Of Migratory Timing Statistics Estimated From Catch And Effort Observations, Arthur J. Butt

OES Theses and Dissertations

The estimate of the mean arrival time based on catch or CPUE of fishes migrating into a fixed harvest area is a function of the number of days fished. Simulation studies using chinook salmon catch and effort data from the Yukon River delta, Alaska indicate that fishing effort concentrated at the tails of the migratory distribution which would tend to erroneously weigh the estimated mean arrival time in the direction of the sample, away from the true mean, is only a significant problem when the number of days open to fishing is small, covering less than 12% of the total …

A Description And Analysis Of The Timing Of Virginia's Weakfish Fishery, Bruce William Hill

OES Theses and Dissertations

The seasonality of Virginia's weakfish fishery is quantitatively defined by providing a mean time of catch and variance of catch for the years 1960 - 1981. On the average. the central half of the population is available for harvest from mid-May through September in all of Virginia's waters and the mean date of harvest is July 20th • The 22 year average variance of catch for Virginia's waters is 3.97. In Virginia's Chesapeake Bay tributaries the mean date of harvest is July 17th and the 22 year average variance of catch is 2.50. There is evidence for an inverse relationship …