Life Sciences Commons^™

Data To Accompany: "Keeping It Cool To Take The Heat: Tropical Lizards Have Greater Thermal Tolerance In Habitats With Lower Ambient Temperatures", Lindsey Swierk

Biological Sciences Faculty Scholarship

No abstract provided.

Environmental Conditions At Fish Capture Sites In Virginia Waters, 2000 -2016, Mary C. Fabrizio, Troy D. Tuckey, Aaron J. Bever, Michael L. Macwilliams

Data

Environmental data are provided in CSV and xlsx formats which can be read in Excel or imported into other software programs such as R, SAS, and MatLab. Surface and bottom temperature, salinity, and dissolved oxygen data were collected by the VIMS Juvenile Fish Trawl Survey program under the direction of Drs. M. C. Fabrizio and T. D. Tuckey.

Stations were selected for sampling from a stratified random design, and collections occurred monthly from 2000 to 2016. Protocols and methodological details can be found in Tuckey and Fabrizio 2021 (Estimating Relative Juvenile Abundance of Ecologically Important Finfish in the Virginia Portion …

Data Repository For "North American Porcupine Distribution In The Pacific Northwest And Evaluation Of A Non-Invasive Monitoring Technique", Cara L. Appel, Katie M. Moriarty, Sean M. Matthews, David S. Green, Stacy Anderson, Evan King, J Scott Yaeger, Jeremy Brown, Claire Bortot, Tim Bean

Research Data Sets

North American Porcupines (Erethizon dorsatum) have a broad geographic distribution across much of the continent, but recent evidence suggests that their populations may be declining in some areas, including the Pacific Northwest. Estimating baseline historical and contemporary distributions of Porcupines is necessary for initiating monitoring efforts and, if necessary, informing strategic conservation actions. We compiled 1905 occurrence records of Porcupines in Washington, Oregon, and northern California from 1908 to 2018. Using maximum entropy modeling (Maxent), we created historical and contemporary distribution models based on Porcupine records from 1981–2010 and 2012–2018, respectively, to match the temporal scale of available …

Evaluation Of Wave Attenuation And Shoreline Protection Provided By Us Atlantic And Gulf Coast Oyster Reef Living Shoreline Projects During Storm Events, Matthew Virden, Eric Sparks

Coastal Research and Extension Center Publications

No abstract provided.

Caribbean Fad Tracking Project Dataset, Erin E. Kimak, David W. Kerstetter, Thomas D. Pitchford

Kerstetter Fisheries and Avian Ecology Lab Datasets

This dataset encompasses crowd-sourced reports of abandoned, lost or otherwise discarded fishing gear (ALDFG), particularly drifting Fish Aggregating Devices (dFADs) from citizen scientists around the North Atlantic Ocean and greater Caribbean region. Data collection did not involve survey efforts, but rather keyword searches of affiliated terms such as "bamboo raft" and "satellite buoy", as well as collection of reports via email and Facebook. Although this dataset is incomplete and an under representation of the total number of ALDFG dFADs as a result of widespread nature of stranding locations, it provides a minimum estimate of the numbers of FADs stranding in …

Winter Malt Barley Growth, Yield, And Quality Following Leguminous Cover Crops In The Northeast United States, Arthur Siller, Heather Darby, Alexandra Smychkovich, Masoud Hashemi

Data and Datasets

There is growing interest in malt barley (Hordeum vulgare L.) production in the Northeast United States. This crop must meet high quality standards for malting but can command a high price if these quality thresholds are met. A two-year field experiment was conducted from 2015–2017 to evaluate the impact of two leguminous cover crops, sunn hemp (Crotalaria juncea L.) and crimson clover (Trifolium incarnatum L.), on subsequent winter malt barley production. Four cover crop treatments –sunn hemp (SH), crimson clover (CC), sunn hemp and crimson clover mixture (SH+CC), and no cover crop (NC) – were grown before …

Journal Of Ecology 2021 Global Rainfall-Seagrass Resilience-Swan River, Chanelle L. Webster, Kathryn M. Mcmahon, Paul S. Lavery, Simone Strydom, Marta Sánchez Alarcón, Kieryn L. Kilminster, Katherine Bennet, Sian Mcnamara

Research Datasets

The excel file contains: summary of daily maximum precipitation from global rainfall analysis, monthly change in seagrass indicators (biomass, leaf density etc); water quality data including salinity, temperature and light data. There are also .nc files containing precipitation data from 1979-2019.

Breeding And Feeding Habitat Selection By An Island Endemic Bird May Increase Its Vulnerability To Climate Change [Dataset], Paul Radley, Eddie Van Etten, David Blake, Robert Davis

Research Datasets

Characterising patterns of habitat use is an important first step for effective conservation planning. Species restricted to low-lying islands are at greatest risk from climate change-related sea level rise, and requirements for breeding and foraging habitat may determine their risk from tidal inundation. The endangered Micronesian Scrubfowl (Megapodius laperouse senex) is a model species for understanding these impacts. This species faces the cumulative challenges of tourist visitation, invasive species, and rising sea levels, yet little is understood about its habitat use in the Rock Islands Southern Lagoon Conservation Area (RISL) of Palau. We studied the habitat requirements of …

Supplementary Table 11: Regional Zotu Table (Data As Relative Abundances), Charlie M. Phelps, Kathryn Mcmahon, Andrew Bissett, Rachele Bernasconi, Peter D. Steinberg, Torsten Thomas, Ezequiel M. Marzinelli, Megan J. Huggett

Research Datasets

This zOTU table is the relative abundances for the whole regional (combined WA and NSW) dataset.

Conserving Critical Seagrass Habitat For Dugong. Dugong Seagrass Associations Summary Data., Kathryn M. Mcmahon, Paul Lavery, Nicole Said, Chris Cleguer, Amanda Hodgson

Research Datasets

This is the summary dataset of the dugong seagrass associations data containing dugong counts, benthic habitat cover, seagrass nutrient content, water temperature, water current speed, water depth and water transparency from three locations in the Pilbara over 3 time periods in 2018-2019.

Conserving Critical Seagrass Habitat For Dugong. Seagrass Network Monitoring Data Summary, Kathryn M. Mcmahon, Paul Lavery, Nicole Said

Research Datasets

This is the summary dataset of the seagrass monitoring data containing benthic habitat, seagrass meadow characteristics, seed density and environmental variables from three locations in the Pilbara over 3-4 time periods in 2018-2019.

Predictors Of Marine Genetic Structure In The Indo-Australian Archipelago [Dataset], Kathryn M. Mcmahon, Udhi Eko Hernawan

Research Datasets

This is the dataset extracted from 101 publications on 99 marine species from eight taxonomic groups in the Indo Australian Archipelago. Data extracted includes measures of genetic structure and the potential predictors.

Suitability Of Native Milkweed (Asclepias) Species Versus Cultivars For Supporting Monarch Butterflies And Bees In Urban Gardens [Research Data], Daniel A. Potter

Entomology Research Data

Public interest in ecological landscaping and gardening is fueling a robust market for native plants. Most plants available to consumers through the horticulture trade are cultivated forms that have been selected for modified flowers or foliage, compactness, or other ornamental characteristics. Depending on their traits, some native plant cultivars seem to support pollinators, specialist insect folivores, and insect-based vertebrate food webs as effectively as native plant species, whereas others do not. There is particular need for information on whether native cultivars can be as effective as true or “wild-type” native species for supporting specialist native insects of conservation concern. Herein …

A Brain-Infecting Parasite Impacts Host Metabolism Both During Exposure And After Infection Is Established, Lauren E. Nadler, Erik Bengston, Erika J. Eliason, Cameron Hassibi, Siri H. Helland-Riise, Ida B. Johansen, Garfield T. Kwan, Martin Tresguerres, Andrew V. Turner, Kelly L. Weinersmith, Øyvind Øverli, Ryan F. Hechinger

Marine & Environmental Sciences Faculty Datasets

1. Metabolic costs associated with parasites should not be limited to established infections. Even during initial exposure to questing and attacking parasites, hosts can enact behavioural and physiological responses that could also incur metabolic costs. However, few studies have measured these costs directly. Hence, little is known about metabolic costs arising from parasite exposure.
2. Further, no one has yet measured whether and how previous infection history modulates metabolic responses to parasite exposure.
3. Here, using the California killifish (Fundulus parvipinnis) and its brain-infecting parasite (Euhaplorchis californiensis), we quantified how killifish metabolism, behaviour, and osmoregulatory phenotype changed upon acute …

Data For Rosenberger & Conforti. Native And Agricultural Grassland Use By Stable And Declining Bumble Bees In Midwestern North America. Insect Cons. & Div., Derek W. Rosenberger, Mckenna Conforti

Faculty Scholarship – Biology

Little is known about how agricultural and native grasslands impact bumble bee populations in the Midwestern United States. We surveyed bumble bee populations over 3 years (2017-2019) at Midewin National Tallgrass Prairie in restored prairie, cattle and bison pastures. Raw data from that work is included in this file. These data were used in the manuscript "Native and agricultural grassland use by stable and declining bumble bees in Midwestern North America" by Derek Rosenberger and McKenna Conforti, and published in the journal Insect Conservation and Diversity in 2020.

Data Supporting The Paper “Greening The Grey Infrastructure: Green Adsorbent Media For Catch Basin Inserts To Remove Stormwater Pollutants”, Viravid Na Nagara, Dibyendu Sarkar, Kirk Barrett, Rupali Datta

Michigan Tech Research Data

Stormwater pollution is a major cause of water quality impairment. Much of the existing stormwater infrastructures provide little or no treatment, especially for dissolved pollutants. Due to the capital cost of installing new infrastructure, retrofitting existing grey infrastructures is a promising alternative to reduce stormwater pollution. In this study, aluminum-based drinking water treatment residuals (WTR), a byproduct from drinking water treatment was combined with other common supplies (sand and carbon material) and developed as adsorbent media for use in catch basin inserts to remove total petroleum hydrocarbons (TPH) and dissolved Cu, Pb, and Zn from stormwater runoff. Hydraulic and treatment …

Source Data: Evaluation Of Batch Fraction, Corn Silage Inclusion Level, And Mixing Duration On Long Particle Distribution Of Finishing Diets For Beef Cattle, Elizabeth Buckhaus, Dathan Smerchek, Zachary K. Smith

Animal Science Data Sets

This data set was used for the project titled “Evaluation of batch fraction, corn silage inclusion level, and mixing duration on long particle distribution of finishing diets for beef cattle”

Corresponding author: Zachary K. Smith (Zachary.Smith@sdstate.edu)

File type: .xlsx
File size: 265 KB

Conservation Of Kit Foxes In The Great Basin Desert: A Review And Recommendations, Robert Lonsinger, Brian M. Kluever, Lucas K. Hall, Randy T. Larsen, Eric M. Gese, Lisette P. Waits, Robert N. Knight

NRM Departmental Data Sets

This data represents a compilation of kit fox (Vulpes macrotis) location within the U.S. state of Nevada and Utah.

File type: xlsx
File Size: 106kb

This dataset is associated with the following article:

Consideration of sample source for establishing reliable genetic microsatellite data from mammalian carnivore specimens held in natural history collections, Journal of Mammalogy, Volume 100, Issue 5, 22 October 2019, Pages 1678–1689, https://doi.org/10.1093/jmammal/gyz112

Impacts Of Larval Diet On Pre-Imaginal Development, Survival And Adult Size Of Six Species Of Coccinellidae, Nathan Mercer, John J. Obrycki

Lady Beetle Research Data

Compared larval development, survival, and adult size of six lady beetle species on a diet of aphids or moth eggs

Multiple Hydrocarbon Data From Mangrove Forests Collected During A Coastal Survey Conducted In The Bay Of Campeche, Southern Gulf Of Mexico From 2016-08-09 To 2016-08-10, Isabel Romero, David Hollander

C-IMAGE data

This survey was conducted in mangrove forests from the Bay of Campeche (Mexico) in August 2016 to search for remnants of the Ixtoc-1 spill. This study focused on (1) the chemical composition and concentration of oil weathering products, (2) weathering processes, and (3) fate and potential toxicological impacts. This dataset contains hydrocarbon concentrations, date and location (longitude and latitude) of sample collection. The measurements of hydrocarbons were made using Agilent 7680B gas chromatograph coupled with an Agilent 7010 triple quadrupole mass spectrometer. This dataset supports the publication: Radović, J. R., Romero, I. C., Oldenburg, T. B. P., Larter, S. R., …

The Effect Of Intensified Illuminance And Artificial Light At Night On Fitness And Susceptibility To Abiotic And Biotic Stressors, Grascen Shidemantle

Biological Sciences Student Scholarship

Changing light conditions due to human activities represents an important emerging environmental concern. Although changes to natural light conditions can be independently detrimental, in nature, organisms commonly face multiple stressors. To understand the consequences of altered light conditions, we exposed a model amphibian (wood frog; Lithobates sylvaticus) to a control and two anthropogenic light conditions: intensified daytime illuminance and artificial light at night - ALAN (intensified daytime illuminance + extended photoperiod). We measured (1) metrics of fitness (hatching success as well as survival to, size at, and time to metamorphosis) (2) susceptibility (time to death) to a commonly cooccurring anthropogenic …

Parasite Susceptibility In An Amphibian Host Is Modified By Salinization And Predators, Nicholas Buss, Jessica Hua

Biological Sciences Student Scholarship

Secondary salinization represents a global threat to freshwater ecosystems. Salts, such as NaCl, can be toxic to freshwater organisms and may also modify the outcome of species interactions (e.g. host-parasite interactions). In nature, hosts and their parasites are embedded in complex communities where they face anthropogenic and biotic (i.e. predators) stressors that influence host-parasite interactions. As human populations grow, considering how anthropogenic and natural stressors interact to shape host-parasite interactions will become increasingly important. We conducted two experiments investigating: (1) the effects of NaCl on tadpole susceptibility to trematodes and (2) whether density- and trait-mediated effects of a parasite-predator (i.e. …

Direct And Indirect Effects Of A Common Cyanobacterial Toxin On Amphibian-Echinostome Dynamics, Nicholas Buss, Matthew Wersebe, Jessica Hua

Biological Sciences Student Scholarship

Wildlife diseases are emerging at unprecedented rates. While there are likely several factors at play, human-mediated environmental alterations may play a significant role. Of growing interest is the effect that microcystin-LR (MC-LR), a cyanotoxin, may have on disease outcomes. In this study, using an amphibian-trematode model we examined (1) the lethal effects of MC-LR on cercariae of trematodes; (2) the sublethal effects of MC-LR exposure on the ability for trematodes to infect green frog tadpoles; and (3) the sublethal effects of MC-LR on green frog tadpole susceptibility to trematodes. We found that environmentally-relevant concentrations of MC-LR at 50, 100, and …

Altering Planting Date To Manage Melanaphis Sacchari (Hemiptera: Aphididae) Populations In Sweet Sorghum, Nathan Mercer

Entomology Research Data

This study was conducted to determine if altering sweet sorghum planting date from the recommended (mid) could reduce yield loss from the aphid pest, Melanaphis sacchari.

Impact Of Buckwheat And Methyl Salicylate Lures On Natural Enemy Abundance For Early Season Management Of Melanaphis Sacchari (Hemiptera: Aphididae) In Sweet Sorghum, Nathan Mercer

Entomology Research Data

Tested effect of buckwheat flowers and methyl salicylate lures to attract natural enemies to sweet sorghum fields to manage Melanaphis sacchari, a recent pest of sweet sorghum.

Adaptive Manipulation Of Information Broadcast From A Microbial Community, Stephen T. Trumbo, Paula Kb Philbrick, Sandra Steiger

EEB Articles

No abstract provided.

Parasitoid Host Acceptance And Suitability For Sugarcane Aphid, Nathan Mercer

Entomology Research Data

Commercially available parasitoids were tested for their host acceptance and suitability on the sugarcane aphid, recent pest of sorghum.

Pennuto Et Al. Goby Migration Data, Christopher Pennuto

Biology Faculty Datasets

These are data used for a manuscript on round goby nearshore/offshore migration behavior in Lake Ontario. The file is an Excel format that includes raw data for number of fish observed, their sizes, size of gobies in sturgeon guts.

Data Set: Comparative Parental Care In Carrion Beetles, Stephen T. Trumbo, Derek S. Sikes

EEB Articles

Comparative experimental study of species can provide insight into behavioral transitions in evolution. The insects offer many such examples for the analysis of parental care. We examined three species of Nicrophorus and two non-Nicrophorus silphid beetles for their ability to conceal a small carcass from competitors. We predicted that species with well-developed parental care would exhibit a heightened ability to conceal a resource from competitors, even when differences in burying behavior were experimentally eliminated. Carcasses were provided to male-female pairs in the laboratory for three days and then experimentally buried in the field, without parents, to assess discovery by …

Using Ecological Analyses To Characterize Socio-Economic Food Deserts, Annie Goyanes, J. Matthew Hoch

Marine & Environmental Sciences Faculty Datasets

“Food desert” refers to an area where citizens lack access to fresh, affordable, nutritious food. Food deserts are generally in low-income urban neighborhoods or rural towns and can be considered environmental or economic injustice. South Florida and Broward County have been documented as having a high food insecurity rate, indicative of households having difficulty putting food on the table. Given the high rate of food insecurity, it was hypothesized that a lack of access to food and the presence of socio-economic food deserts was at least partially responsible. Data was collected by visiting three supermarkets in each of the 13 …