Integrative Biology Commons^™

Purification And Characterization Of Bcsc; An Integral Component Of Bacterial Cellulose Export, Emily D. Wilson Ms

Theses and Dissertations (Comprehensive)

Biofilms are a growing concern in the medical field due to their increased resistance to antibiotics. When found in a biofilm, bacteria can have antibiotic resistance 10-1000 times that of their planktonic counterparts. Therefore, it is important to study the formation of biofilms. Cellulose biofilms are formed by Enterobacteriaceae, such as many Escherichia coli and Salmonella spp. strains. Biofilms provide these species with benefits including antimicrobial protection, development of bacterial communities, promotion of DNA exchange, uptake of nutrients, and, in the case of cellulose biofilms, immune system evasion. Cellulose biofilms are controlled by the Bacterial cellulose synthesis (Bcs) complex located …

Impact Of Biofilm Formation And Composition On Antibiotic Resistance In Environmental Isolates Of Escherichia Coli And Salmonella Spp., Raluca Tutulan

Theses and Dissertations (Comprehensive)

Escherichia coli and Salmonella spp., like most bacteria, prefer to grow in biofilms. These biofilms provide bacteria with protection from harsh environmental factors (such as desiccation and changes in pH), aid in the evasion of host immune responses and provide increased antibiotic resistance. Biofilms are present in non-host environments (e.g. water pipes) as well as in mammalian hosts (in the healthy gastrointestinal microbiota and in over 65% of nosocomial infections). Two important components utilized by E. coli and Salmonella spp. to form biofilms are cellulose and curli fimbriae. Curli fimbriae mediate the attachment of bacteria to abiotic surfaces and …

The Effects Of Lampricide 3-Trifluoromethyl-4-Nitrophenol Toxicity On The Gills Of Larval Sea Lamprey And Non-Target Rainbow Trout And Lake Sturgeon, Lisa A. Sorensen

Theses and Dissertations (Comprehensive)

The pesticide, 3-trifluoromethyl-4-nitrophenol (TFM), is widely used in the Great Lakes to control invasive sea lampreys (Petromyzon marinus) populations, but much about its sub-lethal effects remains unknown. A better understanding of its toxicity is needed to improve TFM effectiveness and to protect non-target organisms from its potential adverse effects. The objectives of this thesis were to test the following two hypotheses: (1) impairment of mitochondrial ATP production by TFM interferes with ATP-dependent ion-uptake by fish, leading to altered electrolyte balance, and (2) perturbations of gill function by TFM are exacerbated in soft, ion poor water (SW; 40 mg …

Ebola Cases And Health System Demand In Liberia, John M. Drake, Rajreni B. Kaul, Laura W. Alexander, Suzanne M. O’Regan, Andrew M. Kramer, J. Tomlin Pulliam, Matthew J. Ferrari, Andrew W. Park

Integrative Biology Faculty and Staff Publications

In 2014, a major epidemic of human Ebola virus disease emerged in West Africa, where human-to-human transmission has now been sustained for greater than 12 months. In the summer of 2014, there was great uncertainty about the answers to several key policy questions concerning the path to containment. What is the relative importance of nosocomial transmission compared with community-acquired infection? How much must hospital capacity increase to provide care for the anticipated patient burden? To which interventions will Ebola transmission be most responsive? What must be done to achieve containment? In recent years, epidemic models have been used to guide …

Ebola Cases And Health System Demand In Liberia, John M. Drake, Rajreni B. Kaul, Laura W. Alexander, Suzanne M. O’Regan, Andrew M. Kramer, J. Tomlin Pulliam, Matthew J. Ferrari, Andrew W. Park

Integrative Biology Faculty and Staff Publications

In 2014, a major epidemic of human Ebola virus disease emerged in West Africa, where human-to-human transmission has now been sustained for greater than 12 months. In the summer of 2014, there was great uncertainty about the answers to several key policy questions concerning the path to containment. What is the relative importance of nosocomial transmission compared with community-acquired infection? How much must hospital capacity increase to provide care for the anticipated patient burden? To which interventions will Ebola transmission be most responsive? What must be done to achieve containment? In recent years, epidemic models have been used to guide …

Immigration Can Destabilize Tri-Trophic Interactions: Implications For Conservation Of Top Predators, Kevin L. S. Drury, Jesse D. Suter, Jacob B. Rendall, Andrew M. Kramer, John M. Drake

Integrative Biology Faculty and Staff Publications

Top predators often have large home ranges and thus are especially vulnerable to habitat loss and fragmentation. Increasing connectance among habitat patches is therefore a common conservation strategy, based in part on models showing that increased migration between subpopulations can reduce vulnerability arising from population isolation. Although three-dimensional models are appropriate for exploring consequences to top predators, the effects of immigration on tri-trophic interactions have rarely been considered. To explore the effects of immigration on the equilibrium abundances of top predators, we studied the effects of immigration in the three-dimensional Rosenzweig-MacArthur model. To investigate the stability of the top predator …

Consequences Of Vine Infestation: Linking Abiotic Influences And Biotic Interactions To Successional And Structural Changes In Coastal Communities, Spencer N. Bissett

Theses and Dissertations

Located at the interfaces of terrestrial and marine environments, coastal habitats are inherently vulnerable to the effects of global change. Barrier island systems in particular serve not only as protective buffers against storm events, but also as sentinel ecosystems for observation of the impacts of sea level rise, and of increasing storm frequency and intensity. In the mid-Atlantic region, shrub thickets of Morella species compose the dominant forest community. The often monospecific nature of these plant community assemblages is advantageous to ecological studies and cross-scale applications; the relatively low diversity facilitates transitions between scales. My objective was to investigate the …

Adaptive Plasticity And Epigenetic Variation In Response To Warming In An Alpine Plant, Adrienne B. Nicotra, Deborah L. Segal, Gemma L. Hoyle, Aaron W. Schrey, Koen J. Verhoeven, Christina L. Richards

Integrative Biology Faculty and Staff Publications

Environmentally induced phenotypic plasticity may be a critical component of response to changing environments. We examined local differentiation and adaptive phenotypic plasticity in response to elevated temperature in half-sib lines collected across an elevation gradient for the alpine herb, Wahlenbergia ceracea. Using Amplified Fragment Length Polymorphism (AFLP), we found low but significant genetic differentiation between low- and high-elevation seedlings, and seedlings originating from low elevations grew faster and showed stronger temperature responses (more plasticity) than those from medium and high elevations. Furthermore, plasticity was more often adaptive for plants of low-elevation origin and maladaptive for plants of high elevation. With …

Effects Of Proline And Glycine On The Cnidocyte Discharge Of Hydra Magnipapillata, Janine R. Appleton

Honors Theses and Capstones

The sense of taste enables animals to utilize environmental cues to detect favorable foods. Through specialized sensory receptors, Cnidarians employ stinging cells called cnidocytes to perform a variety of activities such as locomotion, capturing prey, inducing of feeding responses, and defense. Their discharge is highly regulated by mechanical and chemical signals that are mediated by a complex system including the opsin and taste pathways. Taste 1 Receptors (T1R) have previously been isolated in vertebrates but only until recently, have been noted in invertebrates. Receptors specific to L- amino acids corresponding to the taste sensation of umami, were studied to determine …

Modeling Atp-Binding Cassette G2 (Abcg2) Substrate Specificity, Raghav D. Acharya, Aurijit Sarkar, Glen E. Kellogg

Undergraduate Research Posters

How well can we predict efflux by ATP-binding cassette G2?

It is estimated that there will be about 1.6 million new cases of cancer and half a million cancer deaths in the US during 2015.ATP-binding cassette (ABC) efflux transporters such as ABCG2 are overexpressed in chemotherapy-resistant cancer cells. Anticancer drugs are prone to efflux by these transporters. Being able to identify drugs that are effluxed is of great interest in drug discovery.The current arsenal of methods used to detect efflux are not easily adaptable to high throughput formats and are limited in scope, making experimental analysis an expensive prospect. Hence, …

Life-History Aspects Of Moxostoma Cervinum (Blacktip Jumprock) In The Roanoke River, Virginia, Dezarai A. Thompson, John S. Bentley, Steven L. Powers

Virginia Journal of Science

Life-history aspects of Moxostoma cervinum(Blacktip Jumprock) were identified using specimens from recent collections and the Roanoke College Ichthyological Collection. The largest specimen examined was a female 161.27 mm SL and 66 months of age. Spawning appears to occur in May, with a mean of 2477.6 oocytes (SD = 2825.3) up to 1.54 mm diameter in gravid females. Sexual maturity appears to occur by 1-2 years of age in males and 2-3 years of age in females. Male to female ratio was not significantly different from 1:1. Chironomidae composed the bulk of the diet; while detritus, Trichoptera, Ephemeroptera, and Acari …

Mid-Winter Temperatures, Not Spring Temperatures, Predict Breeding Phenology In The European Starling Sturnus Vulgaris, Tony D. Williams, Sophie Bourgeon, Allison Cornell, Laramie Ferguson, Melinda Fowler, Raime B. Fronstin, Oliver P. Love

Integrative Biology Publications

In many species, empirical data suggest that temperatures less than 1 month before breeding strongly influence laying date, consistent with predictions that short lag times between cue and response are more reliable, decreasing the chance of mismatch with prey. Here we show in European starlings (Sturnus vulgaris) that mid-winter temperature ca 50–90 days before laying (8 January–22 February) strongly (r2 =0.89) predicts annual variation in laying date. Mid-winter temperature also correlated highly with relative clutch size: birds laid later, but laid larger clutches, in years when mid-winter temperatures were lower. Despite a high degree of breeding synchrony (mean laying date …

Developing A Site Specific Understanding Of The Toxicity Of Rare Earth Elements, Cerium And Dysprosium, To Daphnia Pulex And Hyalella Azteca, Oliver Vukov

Theses and Dissertations (Comprehensive)

Rare earth elements (REEs) are a group of similarly reactive metals that are divided into two groups; the light (LREEs) and heavy (HREEs) rare earths. These metals are used in a variety of industries and are critical to the function of modern society. The demand for REEs is expected to increase and as a result new mining projects are being developed with a potential for future mining in Canada. The toxicological understanding of these metals in the aquatic environment is very limited. The objective of this research is to compare the toxicological effect of REEs to the freshwater invertebrates Daphnia …

Population Differentiation And Habitat Selection Of A Montane Red Fox Population In The Greater Yellowstone Ecosystem, Patrick Cross

Graduate Student Theses, Dissertations, & Professional Papers

Montane red fox (Vulpes vulpes) populations across the western United States are genetically and morphologically distinct from foxes at lower elevations. These montane populations also share a preference for subalpine forest habitats. One hypothesis is that they stem from boreal forest-associated ancestors that expanded during the Pleistocene when boreal forests extended farther south than they do today. Forest habitat selection may therefore aid the persistence of native populations surrounded by non-native conspecifics. Alternatively, this behavior may be an avoidance mechanism in response to competition with larger coyotes (Canis latrans), or a product of the fox's natural adaptability. The red fox …

An Examination Of Mathematical Models For Infectious Disease, David M. Jenkins

Williams Honors College, Honors Research Projects

Starting with the original 1926 formulation of the SIR (Susceptible-Infected-Removed) model for infectious diseases, mathematical epidemiology continued to grow. Many extensions such as the SEIR, MSIR, and MSEIR models were developed using SIR as a basis to model diseases in a variety of circumstances. By taking the original SIR model, and reducing the system of three first-order equations to a single first-order equation, analysis shows that the model predicts two possible situations. This analysis is followed by discussion of an alternative use of the SIR model which allows for one to track the amount of sustainable genetic variation in a …

The Effects Of Substrate Roughness In Air And Water On The Gecko Adhesive System, Amanda Palecek

Williams Honors College, Honors Research Projects

In an effort to better understand the fascinating gecko adhesive system, scientists have long tested the abilities of the gecko in controlled conditions that mimic the gecko’s native environment. The effects of humidity, environmental temperature, and exposure to water have all been tested. Roughness, however has not been studied in great detail. Surfaces of varying roughnesses are all over the gecko’s natural environment. We tested geckos on hydrophilic silicon carbide sandpapers of varying roughnesses in both air and water to attempt to better study the effects of roughness on gecko adhesion. When tested on the rougher (1 µm) surface, the …

Speed And Resolution In The Age Of Technological Reproducibility, Shawn Taylor

Theses and Dissertations

The rate of acceleration of the biologic and synthetic world has for a while now, been in the process of exponentially speeding up, maxing out servers and landfills, merging with each other, destroying each other. The last prehistoric relics on Earth are absorbing the same oxygen, carbon dioxide and electronic waves in our biosphere as us. A degraded .jpeg enlarged to full screen on a Samsung 4K UHD HU8550 Series Smart TV - 85” Class (84.5” diag.). Within this composite ecology, the ancient limestone of the grand canyon competes with the iMax movie of itself, the production of Mac pros, …

Understanding The Physiological Effects Of Suspended Material On Rainbow Trout (Oncorhynchus Mykiss), Tyler J. Weinhardt

Theses and Dissertations (Comprehensive)

The effect of global warming on northern environments is becoming increasingly evident. Melting of underlying permafrost is associated with widespread impacts in these environments. The loss of permafrost results in a destabilizing of underlying sedimentary layers resulting in thermokarst slumping. When this occurs on a large scale (mega-slumping) soil material becomes mobilized and is carried into local streams and rivers. The purpose of this study is to examine the sub-lethal physiological effects that suspended material has on rainbow trout (Oncorhynchus mykiss) in the context of the Peel River Plateau. Juvenile rainbow trout were exposed (following Environment Canada exposure …

Molecular Identification And Functional Characteristics Of Peptide Transporter 1 (Pept1) In The Bonnethead Shark (Sphyrna Tiburo), Hannah Hart

UNF Graduate Theses and Dissertations

Many elasmobranchs are considered top predators with worldwide distribution, and in general these fish play an important role in the transfer of energy from the lower to the upper trophic levels within the marine ecosystem. Despite this, little research has been done regarding the rates of prey ingestion, digestion, and the processes of energy and nutrient absorption. Specifically understudied is enzymatic digestion within the intestinal brush border, which functions to break down macromolecules into smaller subunits for luminal absorption across the gastrointestinal epithelium. Given their carnivorous diet, the present study sought to expand knowledge on nutrient intake in elasmobranchs by …

Taxonomy And Phylogeny Of The Asphondylia Species (Diptera: Cecidomyiidae) Of North American Goldenrods: Challenging Morphology, Complex Host Associations, And Cryptic Speciation, Netta Dorchin, Jeffrey Joy, Lukas Hilke, Michael Wise, Warren Abrahamson

Warren G. Abrahamson, II

Reproductive isolation and speciation in herbivorous insects may be accomplished via shifts between host-plant resources: either plant species or plant organs. The intimate association between gall-inducing insects and their host plants makes them particularly useful models in the study of speciation. North American goldenrods (Asteraceae: Solidago and Euthamia) support a rich fauna of gall-inducing insects. Although several of these insects have been the subject of studies focusing on speciation and tritrophic interactions, others remain unstudied and undescribed. Among the latter are at least seven species of the large, cosmopolitan gall midge genus Asphondylia Loew (Diptera: Cecidomyiidae), the taxonomy and biology …