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2003

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Articles 91 - 102 of 102

Full-Text Articles in Statistical Theory

Jmasm6: An Algorithm For Generating Exact Critical Values For The Kruskal-Wallis One-Way Anova, Todd C. Headrick May 2003

Jmasm6: An Algorithm For Generating Exact Critical Values For The Kruskal-Wallis One-Way Anova, Todd C. Headrick

Journal of Modern Applied Statistical Methods

A Fortran 77 subroutine is provided for computing exact critical values for the Kruskal-Wallis test on k independent groups with equal or unequal samples sizes. The subroutine requires the user to provide sorting and ranking routines and a uniform pseudo-random number generator. The program is available from the author on request.

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Randomization Technique, Allocation Concealment, Masking, And Susceptibility Of Trials To Selection Bias, Vance W. Berger, Costas A. Christophi May 2003

Randomization Technique, Allocation Concealment, Masking, And Susceptibility Of Trials To Selection Bias, Vance W. Berger, Costas A. Christophi

Journal of Modern Applied Statistical Methods

It is widely believed that baseline imbalances in randomized clinical trials must necessarily be random. Yet even among masked randomized trials conducted with allocation concealment, there are mechanisms by which patients with specific covariates may be selected for inclusion into a particular treatment group. This selection bias would force imbalance in those covariates, measured or unmeasured, that are used for the patient selection. Unfortunately, few trials provide adequate information to determine even if there was allocation concealment, how the randomization was conducted, and how successful the masking may have been, let alone if selection bias was adequately controlle d. In …

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Improved Multiple Comparisons With The Best In Response Surface Methodology, Laura K. Miller, Ping Sa May 2003

Improved Multiple Comparisons With The Best In Response Surface Methodology, Laura K. Miller, Ping Sa

Journal of Modern Applied Statistical Methods

A method to construct simultaneous confidence intervals about the difference in mean responses at the stationary point and at x for all x within a sphere with radius I R is proposed. Results of an efficiency study to compare the new method and the existing method by Moore and Sa (1999) are provided.

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Penalized Spline Nonparametric Mixed Models For Inference About A Finite Population Mean From Two-Stage Samples, Hui Zheng, Rod Little Mar 2003

Penalized Spline Nonparametric Mixed Models For Inference About A Finite Population Mean From Two-Stage Samples, Hui Zheng, Rod Little

The University of Michigan Department of Biostatistics Working Paper Series

Samplers often distrust model-based approaches to survey inference due to concerns about model misspecification when applied to large samples from complex populations. We suggest that the model-based paradigm can work very successfully in survey settings, provided models are chosen that take into account the sample design and avoid strong parametric assumptions. The Horvitz-Thompson (HT) estimator is a simple design-unbiased estimator of the finite population total in probability sampling designs. From a modeling perspective, the HT estimator performs well when the ratios of the outcome values and the inclusion probabilities are exchangeable. When this assumption is not met, the HT estimator …

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A Semiparametric Model Selection Criterion With Applications To The Marginal Structural Model, M. Alan Brookhart, Mark J. Van Der Laan Mar 2003

A Semiparametric Model Selection Criterion With Applications To The Marginal Structural Model, M. Alan Brookhart, Mark J. Van Der Laan

U.C. Berkeley Division of Biostatistics Working Paper Series

Estimators for the parameter of interest in semiparametric models often depend on a guessed model for the nuisance parameter. The choice of the model for the nuisance parameter can affect both the finite sample bias and efficiency of the resulting estimator of the parameter of interest. In this paper we propose a finite sample criterion based on cross validation that can be used to select a nuisance parameter model from a list of candidate models. We show that expected value of this criterion is minimized by the nuisance parameter model that yields the estimator of the parameter of interest with …

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Ibd Configuration Transition Matrices And Linkage Score Tests For Unilineal Relative Pairs, Sandrine Dudoit Feb 2003

Ibd Configuration Transition Matrices And Linkage Score Tests For Unilineal Relative Pairs, Sandrine Dudoit

U.C. Berkeley Division of Biostatistics Working Paper Series

Properties of transition matrices between IBD configurations are derived for four general classes of unilineal relative pairs obtained from the grand-parent/ grand-child, half-sib, avuncular, and cousin relationships. In this setting, IBD configurations are defined as orbits of groups acting on a set of inheritance vectors. Properties of the transition matrix between IBD configurations at two linked loci are derived by relating its infinitesimal generator to the adjacency matrix of a quotient graph. The second largest eigenvalue of the infinitesimal generator and its multiplicity are key in determining the form of the transition matrix and of likelihood-based linkage tests such as …

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Asymptotic Optimality Of Likelihood Based Cross-Validation, Mark J. Van Der Laan, Sandrine Dudoit, Sunduz Keles Feb 2003

Asymptotic Optimality Of Likelihood Based Cross-Validation, Mark J. Van Der Laan, Sandrine Dudoit, Sunduz Keles

U.C. Berkeley Division of Biostatistics Working Paper Series

Likelihood-based cross-validation is a statistical tool for selecting a density estimate based on n i.i.d. observations from the true density among a collection of candidate density estimators. General examples are the selection of a model indexing a maximum likelihood estimator, and the selection of a bandwidth indexing a nonparametric (e.g. kernel) density estimator. In this article, we establish asymptotic optimality of a general class of likelihood based cross-validation procedures (as indexed by the type of sample splitting used, e.g. V-fold cross-validation), in the sense that the cross-validation selector performs asymptotically as well (w.r.t. to the Kullback-Leibler distance to the true …

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Asymptotics Of Cross-Validated Risk Estimation In Estimator Selection And Performance Assessment, Sandrine Dudoit, Mark J. Van Der Laan Feb 2003

Asymptotics Of Cross-Validated Risk Estimation In Estimator Selection And Performance Assessment, Sandrine Dudoit, Mark J. Van Der Laan

U.C. Berkeley Division of Biostatistics Working Paper Series

Risk estimation is an important statistical question for the purposes of selecting a good estimator (i.e., model selection) and assessing its performance (i.e., estimating generalization error). This article introduces a general framework for cross-validation and derives distributional properties of cross-validated risk estimators in the context of estimator selection and performance assessment. Arbitrary classes of estimators are considered, including density estimators and predictors for both continuous and polychotomous outcomes. Results are provided for general full data loss functions (e.g., absolute and squared error, indicator, negative log density). A broad definition of cross-validation is used in order to cover leave-one-out cross-validation, V-fold …

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Semiparametric Receiver Operating Characteristic Analysis To Evaluate Biomarkers For Disease, Tianxi Cai, Margaret S. Pepe Jan 2003

Semiparametric Receiver Operating Characteristic Analysis To Evaluate Biomarkers For Disease, Tianxi Cai, Margaret S. Pepe

UW Biostatistics Working Paper Series

The receiver operating characteristic (ROC) curve is a popular method for characterizing the accuracy of diagnostic tests when test results are not binary. Various methodologies for estimating and comparing ROC curves have been developed. One approach, due to Pepe, uses a parametric regression model with the baseline function specified up to a finite-dimensional parameter. In this article we extend the regression models by allowing arbitrary nonparametric baseline functions. We also provide asymptotic distribution theory and procedures for making statistical inference. We illustrate our approach with dataset from a prostate cancer biomarker study. Simulation studies suggest that the extra flexibility inherent …

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Semi-Parametric Regression For The Area Under The Receiver Operating Characteristic Curve, Lori E. Dodd, Margaret S. Pepe Jan 2003

Semi-Parametric Regression For The Area Under The Receiver Operating Characteristic Curve, Lori E. Dodd, Margaret S. Pepe

UW Biostatistics Working Paper Series

Medical advances continue to provide new and potentially better means for detecting disease. Such is true in cancer, for example, where biomarkers are sought for early detection and where improvements in imaging methods may pick up the initial functional and molecular changes associated with cancer development. In other binary classification tasks, computational algorithms such as Neural Networks, Support Vector Machines and Evolutionary Algorithms have been applied to areas as diverse as credit scoring, object recognition, and peptide-binding prediction. Before a classifier becomes an accepted technology, it must undergo rigorous evaluation to determine its ability to discriminate between states. Characterization of …

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Checking Assumptions In Latent Class Regression Models Via A Markov Chain Monte Carlo Estimation Approach: An Application To Depression And Socio-Economic Status, Elizabeth Garrett, Richard Miech, Pamela Owens, William W. Eaton, Scott L. Zeger Jan 2003

Checking Assumptions In Latent Class Regression Models Via A Markov Chain Monte Carlo Estimation Approach: An Application To Depression And Socio-Economic Status, Elizabeth Garrett, Richard Miech, Pamela Owens, William W. Eaton, Scott L. Zeger

Johns Hopkins University, Dept. of Biostatistics Working Papers

Latent class regression models are useful tools for assessing associations between covariates and latent variables. However, evaluation of key model assumptions cannot be performed using methods from standard regression models due to the unobserved nature of latent outcome variables. This paper presents graphical diagnostic tools to evaluate whether or not latent class regression models adhere to standard assumptions of the model: conditional independence and non-differential measurement. An integral part of these methods is the use of a Markov Chain Monte Carlo estimation procedure. Unlike standard maximum likelihood implementations for latent class regression model estimation, the MCMC approach allows us to …

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Estimation Of Cumulative Incidence Functions In Competing Risks Studies Under An Order Restriction, Hammou El Barmi, Subhash C. Kochar, Hari Mukerjee, Francisco J. Samaniego Jan 2003

Estimation Of Cumulative Incidence Functions In Competing Risks Studies Under An Order Restriction, Hammou El Barmi, Subhash C. Kochar, Hari Mukerjee, Francisco J. Samaniego

Mathematics and Statistics Faculty Publications and Presentations

In the competing risks problem an important role is played by the cumulative incidence function (CIF), whose value at time t is the probability of failure by time t for a particular type of failure in the presence of other risks. Its estimation and asymptotic distribution theory have been studied by many. In some cases there are reasons to believe that the CIFs due to two types of failure are order restricted. Several procedures have appeared in the literature for testing for such orders. In this paper we initiate the study of estimation of two CIFs subject to a type …

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