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Articles 1 - 17 of 17
Full-Text Articles in Statistical Models
Application Of Ordinal Regression Models To Acquired Stress Resistance In Wild Strains Of Saccharomyces Cerevisiae, Carson Stacy
Application Of Ordinal Regression Models To Acquired Stress Resistance In Wild Strains Of Saccharomyces Cerevisiae, Carson Stacy
Graduate Theses and Dissertations
This thesis explores the application of ordinal regression to the analysis of semi-quantitative growth assays often used when comparing fitness for different strains of the model yeast Saccharomyces cerevisiae. For stress survival assays, yeast stress resistance is measured using an ordered survival score that ranges from 0 (no growth) to 4 (confluent growth). Traditional approaches to analyze this type of data either treats data as a nominal categorical variable or as a continuous numerical variable. These approaches risk loss of information or violation of testing assumptions. In contrast, cumulative logit ordinal regression uses the information contained in the order …
Nonparametric Methods For Bayesian Community Detection In Complex Networks, Kedran Young
Nonparametric Methods For Bayesian Community Detection In Complex Networks, Kedran Young
Graduate Theses and Dissertations
Network analysis is becoming an increasingly popular interdisciplinary area of study, with emerging interest in fields like sociology, biology, economics, and ecology. Within the niche of network analysis, capturing the community structure of a network is one important achievement that many statisticians have been working toward over recent decades. The most popular modeling technique for latent community detection is the Stochastic Block Model (SBM), which falls into the category of latent variable models and will serve as the baseline model throughout this thesis. SBM is widely regarded as the most effective community detection method as it detects latent community membership …
Gan With Skip Patch Discriminator For Biological Electron Microscopy Image Generation, Nishith Ranjon Roy
Gan With Skip Patch Discriminator For Biological Electron Microscopy Image Generation, Nishith Ranjon Roy
Graduate Theses and Dissertations
GAN models have been successfully used for image generation in various sections such as real-life objects like human faces, cars, animal faces, landscapes, etc. This work focuses on biological electron microscopy (EM) image generation. Unlike other real-life objects, biological EM images are obtained through electron microscopy techniques to study biological specimens. Electron microscopy offers high resolution and magnification capabilities, making it a powerful tool for visualizing biological structures at the nanoscale. However, using GAN models for biological EM image generation poses challenges due to the complex and unique arrangements of biological structures and the sparse and asymmetrical patterns in EM …
Sparse Neural Network To Enhance Performance Under Limited Parameter Constraints., Nailah Rawnaq
Sparse Neural Network To Enhance Performance Under Limited Parameter Constraints., Nailah Rawnaq
Graduate Theses and Dissertations
Over the past decade, the widespread adoption of deep neural networks has been a breakthrough driven by significant computational advancements. Additionally, the number of parameters of those models is exponentially increasing for performing complex tasks and achieving better performance. However, in most practical cases, often there are constraints in the number of parameters due to limited resources in storage size and computational cost. Network pruning can lead to an optimal solution to this problem. In this thesis, I present supporting evidence to the hypothesis that higher sparsity leads to better performance for a convolution-based neural network. I perform performance studies …
Automatic Appraisals Of Houses, Sloan Scroggin
Automatic Appraisals Of Houses, Sloan Scroggin
Graduate Theses and Dissertations
Multiple hedonic models and an automatic appraiser model were used to create a residential house’s estimated sales price. The goal is to use the limited data available to a REALTOR® to estimate the future sales price of a residential home without the aid of pictures of the property or viewing the physical property. The first model automates some of the actions of an appraiser by finding comparable sales based on proximity, based both on distance between houses and characteristics of the houses, and then calculating a weighted average price for an estimated sales price of future sales. If the model …
Bayesian Learning Of Spatiotemporal Source Distribution For Beached Microplastic In The Gulf Of Mexico, David Pojunas
Bayesian Learning Of Spatiotemporal Source Distribution For Beached Microplastic In The Gulf Of Mexico, David Pojunas
Graduate Theses and Dissertations
Over the last several decades, plastic waste has gradually accumulated while slowly degrading in terrestrial and oceanic environments. Recently, there has been an increased effort to identify the possible sources of plastic to understand how they affect vulnerable beaches. This issue is of particular concern in the Gulf of Mexico due to the presence of oil, natural gas, and plastic production. In this thesis, we expand upon existing Bayesian plastic attribution models and develop a rigorous statistical framework to map observed beached microplastics to their sources. Within this framework, we combine Lagrangian backtracking simulations of floating particles using nurdle beaching …
Aberrant Responding With Underlying Dominance And Unfolding Response Processes: Examining Model Fit And Performance Of Person-Fit Statistics, Jennifer A. Reimers
Aberrant Responding With Underlying Dominance And Unfolding Response Processes: Examining Model Fit And Performance Of Person-Fit Statistics, Jennifer A. Reimers
Graduate Theses and Dissertations
Researchers have recognized that respondents may not answer items in a way that accurately reflects their attitude or trait level being measured. The resulting response data that deviates from what would be expected has been shown to have significant effects on the psychometric properties of a scale and analytical results. However, many studies that have investigated the detection of aberrant data and its effects have done so using dominance item response theory (IRT) models. It is unknown whether the impacts of aberrant data and the methodology used to identify aberrant responding when using dominance IRT models apply similarly when scales …
Evaluating The Efficiency Of Markov Chain Monte Carlo Algorithms, Thuy Scanlon
Evaluating The Efficiency Of Markov Chain Monte Carlo Algorithms, Thuy Scanlon
Graduate Theses and Dissertations
Markov chain Monte Carlo (MCMC) is a simulation technique that produces a Markov chain designed to converge to a stationary distribution. In Bayesian statistics, MCMC is used to obtain samples from a posterior distribution for inference. To ensure the accuracy of estimates using MCMC samples, the convergence to the stationary distribution of an MCMC algorithm has to be checked. As computation time is a resource, optimizing the efficiency of an MCMC algorithm in terms of effective sample size (ESS) per time unit is an important goal for statisticians. In this paper, we use simulation studies to demonstrate how the Gibbs …
Gene Set Testing By Distance Correlation, Sho-Hsien Su
Gene Set Testing By Distance Correlation, Sho-Hsien Su
Graduate Theses and Dissertations
Pathways are the functional building blocks of complex diseases such as cancers. Pathway-level studies may provide insights on some important biological processes. Gene set test is an important tool to study the differential expression of a gene set between two groups, e.g., cancer vs normal. The differential expression of a gene set could be due to the difference in mean, variability, or both. However, most existing gene set tests only target the mean difference but overlook other types of differential expression. In this thesis, we propose to use the recently developed distance correlation for gene set testing. To assess the …
Quantifying The Simultaneous Effect Of Socio-Economic Predictors And Build Environment On Spatial Crime Trends, Alfieri Daniel Ek
Quantifying The Simultaneous Effect Of Socio-Economic Predictors And Build Environment On Spatial Crime Trends, Alfieri Daniel Ek
Graduate Theses and Dissertations
Proper allocation of law enforcement agencies falls under the umbrella of risk terrainmodeling (Caplan et al., 2011, 2015; Drawve, 2016) that primarily focuses on crime prediction and prevention by spatially aggregating response and predictor variables of interest. Although mental health incidents demand resource allocation from law enforcement agencies and the city, relatively less emphasis has been placed on building spatial models for mental health incidents events. Analyzing spatial mental health events in Little Rock, AR over 2015 to 2018, we found evidence of spatial heterogeneity via Moran’s I statistic. A spatial modeling framework is then built using generalized linear models, …
Structural Analysis Of The Multifunctional Spoiie Regulatory Protein Of Clostridioides Difficile., Blythe Emily Bunkers
Structural Analysis Of The Multifunctional Spoiie Regulatory Protein Of Clostridioides Difficile., Blythe Emily Bunkers
Graduate Theses and Dissertations
Clostridioides (formally Clostridium) difficile is a medically relevant pathogen pertinent to infectious disease research. C. difficile is distinctly known for its ability to produce two toxins, enterotoxin A and cytotoxin B, and the propensity to colonize the mammalian gastrointestinal tract. It is known that metabolism is tightly correlated with sporulation in endospore producers such as C. difficile, but an interesting and novel regulatory relationship found by the Ivey lab has yet to be understood. The relationship explored in this study is observed between the sporulation factor, SpoIIE, which represses expression of an ABC peptide transporter, app. In this study, two …
Spatio-Temporal Prediction Of Arkansas Gubernatorial Election, Michael Harris
Spatio-Temporal Prediction Of Arkansas Gubernatorial Election, Michael Harris
Graduate Theses and Dissertations
Our goal is to create spatio-temporal models for predicting future gubernatorial elections. For a concrete example of how well our models work we use past data to predict the 2018 Arkansas gubernatorial election and use the existing 2018 election data to check our models predictive accuracy. Gubernatorial election data was collected from the Arkansas Secretary of State website while related covariate data was collected from the website for the Federal Reserve Bank of St. Louis. The data we collect is on the county level. For predictive purposes we fit multiple models to the data using Markov chain Monte Carlo and …
A Bayesian Framework For Estimating Seismic Wave Arrival Time, Hua Zhong
A Bayesian Framework For Estimating Seismic Wave Arrival Time, Hua Zhong
Graduate Theses and Dissertations
Because earthquakes have a large impact on human society, statistical methods for better studying earthquakes are required. One characteristic of earthquakes is the arrival time of seismic waves at a seismic signal sensor. Once we can estimate the earthquake arrival time accurately, the earthquake location can be triangulated, and assistance can be sent to that area correctly. This study presents a Bayesian framework to predict the arrival time of seismic waves with associated uncertainty. We use a change point framework to model the different conditions before and after the seismic wave arrives. To evaluate the performance of the model, we …
Comparing Elo, Glicko, Irt, And Bayesian Irt Statistical Models For Educational And Gaming Data, Breanna Morrison
Comparing Elo, Glicko, Irt, And Bayesian Irt Statistical Models For Educational And Gaming Data, Breanna Morrison
Graduate Theses and Dissertations
Statistical models used for estimating skill or ability levels often vary by field, however their underlying mathematical models can be very similar. Differences in the underlying models can be due to the need to accommodate data with different underlying formats and structure. As the models from varying fields increase in complexity, their ability to be applied to different types of data may have the ability to increase. Models that are applied to educational or psychological data have advanced to accommodate a wide range of data formats, including increased estimation accuracy with sparsely populated data matrices. Conversely, the field of online …
Bayesian Model For Detection Of Outliers In Linear Regression With Application To Longitudinal Data, Zahraa Al-Sharea
Bayesian Model For Detection Of Outliers In Linear Regression With Application To Longitudinal Data, Zahraa Al-Sharea
Graduate Theses and Dissertations
Outlier detection is one of the most important challenges with many present-day applications. Outliers can occur due to uncertainty in data generating mechanisms or due to an error in data recording/processing. Outliers can drastically change the study's results and make predictions less reliable. Detecting outliers in longitudinal studies is quite challenging because this kind of study is working with observations that change over time. Therefore, the same subject can produce an outlier at one point in time produce regular observations at all other time points. A Bayesian hierarchical modeling assigns parameters that can quantify whether each observation is an outlier …
A Bayesian Variable Selection Method With Applications To Spatial Data, Xiahan Tang
A Bayesian Variable Selection Method With Applications To Spatial Data, Xiahan Tang
Graduate Theses and Dissertations
This thesis first describes the general idea behind Bayes Inference, various sampling methods based on Bayes theorem and many examples. Then a Bayes approach to model selection, called Stochastic Search Variable Selection (SSVS) is discussed. It was originally proposed by George and McCulloch (1993). In a normal regression model where the number of covariates is large, only a small subset tend to be significant most of the times. This Bayes procedure specifies a mixture prior for each of the unknown regression coefficient, the mixture prior was originally proposed by Geweke (1996). This mixture prior will be updated as data becomes …
An Economic Alternative To The C Chart, Ryan William Black
An Economic Alternative To The C Chart, Ryan William Black
Graduate Theses and Dissertations
Because the probability of Type I error is not evenly distributed beyond upper and lower three-sigma limits the c chart is theoretically inappropriate for a monitor of Poisson distributed phenomena. Furthermore, the normal approximation to the Poisson is of little use when c is small. These practical and theoretical concerns should motivate the computation of true error rates associated with individuals control assuming the Poisson distribution. An economic alternative to the c chart is described as a statistical model of upward shift from c0 to c1 and the two charts are compared in theory. For a range of c chart …