Atomic, Molecular and Optical Physics Commons^™

Multi-Modal Mri For The Pre-Clinical Evaluation Of Hiv-Linked Changes In The Central Nervous System, Gabriel Gauthier

Theses & Dissertations

Though the inception of anti-retroviral therapy (ART) has fundamentally changed the life expectancy of human immunodeficiency virus (HIV) patients, accessibility and outcomes vary enormously along demographic lines. Even for people living with HIV (PLWH) with perfect access and adherence to anti-retroviral drugs (ARVs), modern treatment plans are fundamentally unable to secure complete viral remission for patients. The cause of this perpetual infection is the persistence of viral reservoirs in the central nervous system (CNS), hidden beyond the reach of modern ARVs, leaving patients to deal with lifelong medication side-effects and risks of developing HIV-associated neurodegenerative disorders (HAND). Despite improving outcomes …

Nonthermalizing Dynamics Of Interacting Rydberg Atoms, Nicolaus A. Chlanda

Physics and Astronomy Honors Papers

An isolated system of ultracold Rydberg atoms can come to equilibrium by exchanging energy through dipole-dipole interactions. In our experiment, a static electric field of a few V/cm shifts the energy levels of the atoms, so that the energy levels are nearly degenerate at zero field and fan out with increasing field to form a manifold. We excite atoms to energy levels near the center of the manifold, where the spacing is nearly harmonic. We allow them to interact for a few microseconds, by which time the population of each energy level has reached a steady state. The population is …

Theoretical Proof Of And Proposed Experimental Search For The Ground Triplet State Of A Wigner-Regime Two-Electron ‘Artificial Atom’ In A Magnetic Field, Marlina Slamet, Viraht Sahni

Publications and Research

It is experimentally established that there is no ground triplet state of the natural He atom. There is also no exact analytical solution to the Schrödinger equation corresponding to this state. For a two-dimensional two-electron ‘artificial atom’ or a semiconductor quantum dot in a magnetic field, as described by the Schrödinger–Pauli equation, we provide theoretical proof of the existence of a ground triplet state by deriving an exact analytical correlated wave function solution to the equation. The state exists in the Wigner high-electron-correlation regime. We further explain that the solution satisfies all requisite symmetry and electron coalescence constraints of …

Unpaired Virtual Histological Staining Of Tissue From Autofluorescence Using Regularized Cycle-Consistent Adversarial Networks, Zhesi Wen

Theses and Dissertations

We present a regularized CycleGAN with a Dense Residual U-Net to virtually stain autofluorescence images of tissue into H&E-like images. Our method outperforms standard architectures, reduces artifacts, and achieves superior FID scores, enabling efficient, label-free, and accurate digital pathology for unpaired datasets using multi-channel fluorescence inputs.

The Search For Slow Particles And Magnetic Monopoles With Nova, John Clark

Poster Presentations

Singular magnetic poles, north or south, have been theorized to exist for hundreds of years. In the modern day, the elusive singular magnetic pole still remains undiscovered. The appearance of this particle would help confirm many Grand Unified Theories, GUTs, and revolutionize our understanding of some of the fundamental forces of the universe. Fermilab's NOvA collaboration is working on ways to screen and detect magnetic monopoles and other slow-moving particles coming from outer space alongside their main mission to study neutrinos. The aim of this work is to determine and improve the Far Detector’s efficiency at identifying slow moving particles. …

New Mathematical Approaches To Ultra-Cold Atoms, Joanna Ruhl

Graduate Doctoral Dissertations

This dissertation addresses three main themes: cold atoms, integrability, and number theory. In this dissertation we present novel approaches to four models, each of which touches on at least two of the three themes. At the intersection of cold atoms and integrability, we present a Lagrange bracket formalism that allows for exact computation of initial quantum fluctuations of soliton breathers which previously could only be estimated numerically, and the advance in software tools developed in Python to facilitate studies of two-dimensional disc breathers. At the intersection of integrability and number theory, we present a propagator for the Newman-Moore, or triangular …

Gravity Wave Breaking Over Northern Utah With An Advanced Mesospheric Temperature Mapper And Sodium Lidar, Eric Davis

All Graduate Reports and Creative Projects, Fall 2023 to Present

Considerable progress has been made in recent decades in the understanding of gravity wave (GW) dynamics. However, there remain important aspects and effects that are poorly understood. In particular, the coupling and deposition of their energy and momentum into the mesosphere lower thermosphere (MLT) region and the interaction and instability dynamics that are directly associated with GW breaking. Using an Advanced Mesosphere Temperature Mapper (AMTM) several strong wave breaking events were observed in the summer of 2015 at USU’s BLO research station. These events have exhibited high momentum fluxes and associated strong wave breaking, prompting detailed data analyses. Rossby waves, …

The Search For Slow Particles And Magnetic Monopoles With Nova, John Clark

Honors Theses

Singular magnetic poles, north or south, have been theorized to exist for hundreds of years. In the modern day, the elusive singular magnetic pole still remains undiscovered. The appearance of this particle would help confirm many Grand Unified Theories, GUTs, and revolutionize our understanding of some of the fundamental forces of the universe. Fermilab's NOvA collaboration is working on ways to screen and detect magnetic monopoles and other slow-moving particles coming from outer space alongside their main mission to study neutrinos. The aim of this work is to determine and improve the Far Detector’s efficiency at identifying slow moving particles. …

Effects Of Group Delay Dispersion In Silica Glass On Non-Gaussian Laser Pulses, Lars Pedersen

Honors Program: Senior Projects (Public)

We present an analysis of how the group delay dispersion in silica glass affects the envelope of non-Gaussian laser pulses. In particular, we examine femtosecond pulses in the ultraviolet regime with cosine squared and symmetric exponential envelope shapes. For both envelope shapes, our results show a linear or semi-linear dependence of both the maximum electric field strength and duration on the group delay dispersion when the pulse passes through the silica glass medium with a thickness between 1 μm and 10 μm. This computational analysis is done using a fast Fourier transform method.

Power-Beaming: Wireless Energy Transfer Using Lasers, Spencer L. Barnett

ATU Scholars Symposium

The objective of the project is to implement a wireless energy transfer system utilizing laser technology. This system involves modulating the laser’s beam profile and spatial distribution through precise optical manipulation. The energy transmitted by the laser is captured by a photovoltaic array, commonly referred to as a solar panel, which is engineered to convert incident photons into direct current (DC) electrical power. The current challenge is to develop a reliable wireless energy transfer mechanism capable of operating over extended distances, thereby overcoming the constraints imposed by wired connections, particularly in environments where wiring is impractical, such as in space. …

Computational Analysis Of Proton Conductivity Factors In Grotthuss-Style Mechanisms, Brock Dyer

Physics and Astronomy Honors Papers

The mechanism and fundamental molecular properties involved in proton conduction are discussed. Four calculable properties are presented: the proton affinity, binding energy (between protonated and neutral forms), intramolecular tautomerization barrier, and proton hopping barrier. An overview of the computational methods used in this thesis, including an introduction to the many-body Schrödinger equation and Density Functional Theory, as well as a look at Plane-Wave Density Functional Theory and Gaussian-Type Orbital Density Functional Theory are presented. 4,5-dimethyl-[1,2,3]-triazole is used as a model system, with 10 variations being generated with varying amounts and positions of fluorine substitution on the methyl groups. Preliminary calculations …

Doppler Free Laser Spectroscopy, Luis F. Ayala

SACAD: Scholarly Activities

Using Doppler Free laser spectroscopy we observed ground state and excited state Hyperfine structure of Rb atoms Isotopes 85 and 87.

Are The Vibrational Modes Of Molecules Quantized, Aniol Majoral Obradors

SACAD: Scholarly Activities

In electron scattering from N2 molecules we observe quantized vibrational levels of N2-. These vibrational levels are well suited for energy calibration when electron transmission of unknown molecules is performed.

Vorticies In The Nonlinear Optical Fluid, Patrick C. Ford

Electronic Theses and Dissertations

In this dissertation, we review the dynamics of the propagation of a laser through a nonlinear medium, and the dynamics of a self-interacting superfluid phase, and show a mathematical analogy between them. We identify an equivalence that allows direct comparison of the properties and dynamics of the optical fluid with those of the Bose-Einstein condensate. Next, we describe some experimental techniques and methods for data capture and analysis on the way to presenting a novel experimental apparatus that has allowed us to study non-equilibrium nonlinear vortex dynamics in the optical fluid, and that will allow more general future studies of …

How Does Honey Make Gold Nanoparticles? Optical Analysis Of The Effects Of Temperature And Composition, Lydia Alvarnaz, Davon Ferrara Phd

SPARK Symposium Presentations

In recent years, with an increasing interest in green chemistry, there has been an effort to find and understand synthesis methods using biologically-produced reducing and capping agents to produce stable gold nanoparticles (GNPs). Previous research using honey has shown this substance is a viable reducing agent in the formation of nanoparticles but have not looked at the stability of the colloidal gold nanoparticles. In this work, gold nanoparticles were reduced from an aqueous solution of gold chloroauric acid and a solution of varying concentrations of honey and water. The formation of NPs was analyzed using UV-Visible transmission spectroscopy to confirm …

On Static Equilibrium State Of An Electron-Positron Pair Interacting By Electrostatic And Magnetic Forces, Polievkt Perov, Natasha Perova-Mello

College of Arts & Sciences Faculty Works

An electron-positron pair can be in static equilibrium where the magnetic torque is zero and the attractive Coulomb’s force between unlike charges and the repelling force between the spin magnetic moments of these two particles balance each other out. An electron-positron pair near the equilibrium position can be modeled as an oscillator consisting of two masses on a spring. The calculations of the equilibrium distance, the effective “electromagnetic spring constant”, and the frequency of oscillations of an electron-positron pair near the equilibrium are presented. The calculations might be useful for the students in their studies of electricity, magnetism, and particle …

Transfer Efficiencies Of Surface-To-Surface Transport Of Micron-Sized Actinide Surrogate Particles, Austin R. Powell

Theses and Dissertations

Particle effluent of varying sizes is released during routine activities within laboratory environments and these particles can come in contact with a wide range of surfaces. Particles of micron size or smaller can be especially pervasive and can transfer between multiple subsequent surfaces, leading to the progressive contamination of a laboratory. Understanding the transport dynamics of micron sized particles will help inform facility personnel of the possibility of contamination by these potentially hazardous materials of interest. In this research, the transfer efficiency of micron sized surrogate actinide particles (Europium-doped Gadolinium Oxysulfide (EGOS)) is measured for multiple materials, between two particle …

Numerical Studies Of Semiclassical Light Storage Using The Coherent Atomic Transfer Function, Zachary T. Johnson

Theses and Dissertations

Quantum communication through photons relies on photonic storage to preserve quantum states. However, when photons interact with matter, quantum information becomes distorted. A recently developed semi-classical analytical model predicts output light pulses from an electromagnetically induced transparency (EIT) system. Using the predictions, the model known as the Coherent Atomic Transfer (CAT) Function, is capable of predicting the stored pulse or reconstructing the original pulse. Using numerical convolution and deconvolution with the CAT function as an analog of the point spread function of Fourier optics can provide insights on the effects of EIT storage on the retrieved pulse. Blind deconvolution is …

Isotopic Analysis Of Lithium Hydroxide Monohydrate Using Laser-Induced Breakdown Self-Reversal Isotopic Spectrometry (Libris) And Machine Learning, Madison R. Moran

Theses and Dissertations

High-resolution Laser-Induced Breakdown Self-Reversal Isotopic Spectrometry (LIBRIS) is implemented to record the 15.8 pm Li I 670.8 nm isotopic shift in LiOH · H₂O samples of varying 6, 7Li abundance. A simple univariate linear regression demonstrates an acquired isotopic shift of 13.813 ± 1.21 pm in samples varying from 3 to 95 ⁶Li at%. Supervised machine learning regressions are trained on self-reversal wavelength locations in order to quantify ⁶Li abundance. A stacked ensemble using two base learners yields the superlative characterization of 6Li abundance with RMSE of 5.66 at% and detection limit of 18.8 at%. Using …

Implications Of Magnetic Evolution On Coronal Loop Thermal Variation Prior To Solar Flares, Kara L. Kniezewski

Theses and Dissertations

Solar flares are intense bursts of electromagnetic radiation, which occur due to a rapid destabilization and reconnection of the magnetic field. While flares are a magnetic phenomena, very little attention has been paid to thermal conditions in the corona prior to flare onset. This study serves as a follow-on to Kniezewski et al., 2024, where the EUV emission from coronal loops was observed to vary substantially and without any coherence between channels before 53 off-limb flares. These variations suggest multiple mechanisms within the coronal magnetic field are responsible for heating fluctuations. Here, the 3D magnetic field is modeled using a …

On The Exploration Of Crystallographic Anisotropy And Defects In Shock Loading Using Molecular Dynamics, Benjamin P. Helman

Theses and Dissertations

The impact of crystallographic orientation, grain boundaries, and vacancies on the shock behavior of aluminum was investigated using molecular dynamics simulations. Shock loading in the [001], [011], and [111] directions was explored, revealing anisotropic behavior in shock speed, melting, dislocation density, and unique phase changes. The Hugoniot elastic limit in the [100], [110], and [111] directions was calculated as 23.2 GPa, 24 GPa, and 18.4 GPa respectively. These results were found to be an order of magnitude larger than the compressive yield strength computed at equilibrium. Additionally, metastable melting in the [011] and [111] directions occurred roughly 1000 K below …

Material Classification With Spectropolarimetric Lidar, Alexander J. Watson

Theses and Dissertations

A method for characterizing unknown targets using a hyperspectral polarimetric light detection and ranging (LiDAR) system is presented. Light reflected from manmade objects tends to be more polarized than light reflected from objects in the natural world. As such, polarization measurements can be used in remote sensing applications to differentiate artificial and natural objects. Previous works have attempted to characterize objects through passive polarimetric imagery. Methods developed by Cain and Lemaster and Cunningham facilitate reconstruction of the Stokes Vector from returning light. Martin used multispectral polarimetry to classify targets when the angle of incidence (AOI) is close to 0º. Here, …

Convergent Close-Coupling Approach To Electron Scattering On H3+ : Scattering Dynamics And Dissociative Processes, Reese K. Horton, Michael V. Pak, Igor Bray, Dmitry V. Fursa

Faculty Publications

Cross sections for electron impact dissociative excitation and ionization in scattering on vibrationally excited levels of the ground electronic state of H₃⁺, D₃⁺, and T₃⁺ are reported in the energy range of 8–1000 eV. Calculations have been performed using a newly developed version of the molecular convergent close-coupling code. Convergence of the cross sections with the size of the projectile partial-wave and close-coupling expansions is examined. Branching ratios and cross sections for the yields of D₂⁺ and D⁺ from dissociative excitation of D₃⁺ are presented and isotope …

Convergent Close-Coupling Approach To Electron Impact Dissociation Of The Polyatomic Molecule H 3 + And Its Isotopologues, Reese K. Horton, Michael V. Pak, Igor Bray, Dmitry V. Fursa

Faculty Publications

Cross sections for electron impact dissociative excitation and ionization in scattering on vibrationally excited levels of the ground electronic state of H₃⁺ and its isotopologues are reported in the energy range of 8 to 1000 eV. Calculations have been performed using a newly developed version of the molecular convergent close-coupling code. Cross sections for total dissociative excitation, ionization yielding atomic fragments such as D⁺, and the total inelastic cross section are presented. Good agreement with available experiments has been demonstrated.

Explorations Of Dna-Single-Walled Carbon Nanotube Interactions To Develop Multiplexed Molecularly Specific Biosensors For Inflammation, Amelia K. Ryan

Dissertations and Theses

Inflammatory cytokines such as interleukin-6 (IL-6) and interleukin-12 (IL-12) are central regulators of immune signaling and key biomarkers of disease, yet existing assays for their detection remain slow, invasive, and lack multiplexing ability. This dissertation advances the development of single-walled carbon nanotube (SWCNT) optical nanosensors capable of real-time, multiplexed, and molecularly specific cytokine detection through innovative use of single-stranded DNA (ssDNA) interfaces.

First, an IL-6-specific DNA aptamer was employed as both a dispersing agent and recognition probe for SWCNT fluorescence sensing. Sequence modifications, including anchor domains, truncations, and thermally induced refolding, were systematically tested to optimize sensitivity and selectivity. The …

Design And Construction Of An Affordable Adjustable Repetition Rate Optical Frequency Comb, Christopher Latchford

Physics, Astronomy and Geophysics Honors Papers

Two different adjustable repetition rate optical frequency combs were designed and constructed with off-the-shelf components, including several improvements to established erbium fiber designs. These designs were assembled at a fraction of the cost of a commercial comb. Both combs were constructed with a repetition rate of roughly 100 MHz, with one combs tuning range being 2 MHz and the others being 3 MHz. These combs followed different designs, the first being a modification of an established nonlinear polarization rotation (NPR) design, the second being a modification to a “figure 9” design. A stabilization control loop for frep achieved long-term drifts …

Quantum-Mechanical Definition Of The Classical Scalar Potential In Schrödinger-Pauli And Schrödinger Theory, Viraht Sahni

Publications and Research

According to the Bohr correspondence principle, the external temporal scalar potential in the classical equation of motion is replicated in quantum theory as a multiplicative operator. An equivalent quantum-mechanical definition of the scalar potential in Schrödinger-Pauli/Schrödinger theory is provided. The potential is a known universal functional of the wave function. At each instant of time, it is the work done in a conservative “classical” field representative of internal properties of the system: Pauli and Coulomb correlations, kinetic effects, the density, the Lorentz force, an internal magnetic component, and the current density response. The Hamiltonians are thus rewritten in a …

Collision-Induced Absorption Spectra Of N₂ And Ch₄, Ryan M. Johnson, Peter F. Bernath, Brant Billinghurst, Jianbao Zhao

Chemistry & Biochemistry Faculty Publications

Collision-induced spectra are essential for radiative transfer modeling of Titan's atmosphere. We present experimental spectra of nitrogen–methane mixtures with an accompanying fit of N₂-CH₄ collision-induced absorption in the 30–400 cm⁻¹ region at about 130 K. We found a peak absorption of 2.30 × 10⁻⁵ cm⁻¹ amagat⁻² at 75 cm⁻¹ and a secondary peak of 1.35 × 10⁻⁵ c⁻¹ amagat⁻² at 206.5 cm⁻¹, which agrees with previous studies. Our work does not support the suggestion that N₂-CH₄ CIA in the far-infrared should be increased by about 50%, as suggested by spectroscopic modeling of Titan using data from A. Borysow & C. …

Momentum Imaging Of Electrons And Recoil Ions From Anion-Neutral Interactions In A Cryogenic Ion Storage Ring, F. Herrmann, W. Zhang, M. Schulz, D. V. Chicharro, A. Dorn, M. Grieser, F. Grussie, H. Kreckel, O. Novotny, F. Trost, A. Wolf, T. Pfeifer, C. D. Schröter

Physics Faculty Research & Creative Works

We have momentum-analyzed electrons and recoil ions in triple coincidence with projectiles neutralized in 300-keV Si-+Ar collisions. The experiment was performed at a cryogenic ion storage ring with an in-ring reaction microscope. Differential momentum distributions for detachment with simultaneous target ionization were obtained. At more than 15% of the detachment-only rate the ionization rate is surprisingly large. A correlated two-electron channel is found to be dominant. This is also unexpected because the projectile energy is well below the threshold for the correlated process.

A Distorted-Wave Approach To The Elastic Scattering Of Twisted Electrons, Allison Harris, Stephan Fritzsche

Faculty publications – Physics

The elastic scattering of spinless vortex electrons on realistic target atoms has been investigated. In particular, expressions are derived in different approximations for the angular distribution of elastically scattered electrons. We develop a distorted wave formalism that includes the effect of the atomic potential on the impinging vortex electron and compare this to a plane-wave Born approximation (PWBA) without such a distortion. Detailed computations have been performed for elastic scattering of vortex electrons on helium, neon, and argon targets by varying the energy, topological charge, and opening angle. Our results show that the overall magnitude of the angular distribution of …