Oceanography Commons^™

Environmentally-Driven Variation In The Population Dynamics Of Gulf Menhaden (Brevoortia Patronus), Grant D. Adams

Master's Theses

Gulf Menhaden (Brevoortia patronus) is an abundant forage fish distributed throughout the Northern Gulf of Mexico (NGOM). Gulf Menhaden support the second largest fishery, by weight, in the United States and represent a key linkage between upper and lower trophic levels. Variation in the population dynamics can, therefore, pose consequences for the ecology and economy in the NGOM. Here we aim to understand variation in the individual and population dynamics of Gulf Menhaden throughout ontogeny and how such variation relates to environmental processes. We utilized a suite of fishery-dependent and –independent, remote sensing, modeled, and in situ data …

Age, Growth, And Reproduction Of Vermilion Snapper (Rhomboplites Aurorubens) In The North-Central Gulf Of Mexico, Trevor Dalton Moncrief

Master's Theses

Vermilion Snapper is a commonly harvested species of reef fish in the northern Gulf of Mexico (GOM). It supports both a large commercial and popular recreational fishery, however knowledge of this fish’s life history is limited spatially. Non-linear curve fitting was used to estimate growth parameters and Akaike information criteria (AIC) was used to determine relative model fit. The 2-parameter von Bertalanffy growth function provided the best model fit and lowest AIC score. Histological examination indicated that Vermilion Snapper are batch spawners with asynchronous oocyte development. Additionally, 17% of Vermilion Snapper in the actively spawning phase containing 24 hour POF’s …

Loop Current Spin-Off Eddies, Slope Currents And Dispersal Of Reef Fish Larvae From The Flower Gardens National Marine Sanctuary And The Florida Middle Grounds, Donald R. Johnson, Harriet Perry, Guillermo Sanchez-Rubio, Mark A. Grace

Gulf and Caribbean Research

Large energetic spin—off eddies from Loop Current intrusions into the Gulf of Mexico play a major role in water exchange between the continental shelf and the deep basin in the northern Gulf. Reef fish larvae, spawned on the outer shelf and planktonic during their early life history, are broadly dispersed by this mechanism, but may be lost to the cohort by transport away from suitable settlement habitat. In this study, satellite altimeter data—assimilative ocean model currents (HYCOM) from 2003—2015 are used to calculate kinetic energy of the mixed layer over the upper continental slope (200 m —1000 m) due to …

Modern Fair-Weather And Storm Sediment Transport Around Ship Island, Mississippi: Implications For Coastal Habitats And Restoration Efforts, Eve Rettew Eisemann

Master's Theses

The Mississippi – Alabama barrier island chain is experiencing accelerated sea level rise, decreased sediment supply, and frequent hurricane impacts. These three factors drive unprecedented rates of morphology change and ecosystem reduction. All islands in the chain have experienced land loss on the order of hectares per year since records began in the 1840s. In 1969, Hurricane Camille impacted as a Category 5, breaching Ship Island, and significantly reduced viable seagrass habitat. Hurricane Katrina impacted as a Category 3 in 2005, further widening Camille Cut. To better understand the sustainability of these important islands and the ecosystems they support, sediment …

Bloom Or Bust: Retrospective Analysis Of The Giant Jellyfish, Nemopilema Nomurai (Scyphozoa: Rhizostomeae), Ecology In The East Asian Marginal Seas, Naomi Yoder

Master's Theses

The Giant Jellyfish, Nemopilema nomurai, is a large-bodied bloom-forming jellyfish that occurs in the semi-enclosed basins of the East Asian Marginal Seas. N. nomurai has bloomed more frequently in the past 20 years than in any period previously recorded. In Japan, recent N. nomurai blooms were responsible for millions of dollars in lost revenue and equipment damage to commercial fisheries alone. This study statistically analyzed 21 environmental factors in connection with N. nomurai occurrence (using occurrence as a proxy for blooms). Eight factors resulted in a statistically significant or marginally significant (p ≤ 0.10), linear or non-linear relationship with …

Determining The Viability Of Recent Storms As Modern Analogues For North-Central Gulf Of Mexico Paleotempestology Through Sedimentary Analysis And Storm Surge Reconstruction, Joshua Caleb Bregy

Master's Theses

The northern Gulf of Mexico has been devastated by recent intense storms. Camille (1969) and Katrina (2005) are two notable hurricanes that made landfall in virtually the same location in Mississippi. However, fully understanding the risks and processes associated with hurricane impacts is impeded by a short and fragmented instrumental record. Paleotempestology could potentially use modern analogues from intense storms in this region to extend the hurricane record back to pre-observational time. Existing empirically based models can back-calculate surge heights over coastal systems as a function of transport distance, particle settling velocity, and gravitational acceleration. We collected cores in a …

A Compilation Of Global Bio-Optical In Situ Data For Ocean-Colour Satellite Applications, André Valente, Shubba Sathyendranath, Vanda Brotas, Steve Groom, Michael Grant, Malcolm Taberner, David Antoine, Robert A. Arnone Prof, William M. Balch, Kathryn Baker, Ray Barlow, Simon Bélanger, Jean-François Berthon, Sükrü Beşiktepe, Vittorio Brando, Elisabetta Canuti, Francisco Chavez, Hervé Claustre, Richard Crout, Robert Frounin, Carlos García-Soto, Stuart W. Gibb, Richard Gould, Stanford Hooker, Mati Kahru, Holger Klein, Susanne Kratzer, Hubert Loisel, David Mckee, Brian G. Mitchell, Tiffany Moisan, Frank Muller-Karger, Leonie O'Dowd, Michael Ondrusek, Alex J. Poulton, Michel Repecaud, Timothy Smythe, Heidi M. Sosik, Michael Twardowski, Kenneth Voss, Jeremy Werdell, Marcel Wernand, Giuseppe Zibordi

Faculty Publications

A compiled set of in situ data is important to evaluate the quality of ocean-colour satellite-data records. Here we describe the data compiled for the validation of the ocean-colour products from the ESA Ocean Colour Climate Change Initiative (OC-CCI). The data were acquired from several sources (MOBY, BOUSSOLE, AERONET-OC, SeaBASS, NOMAD, MERMAID, AMT, ICES, HOT, GeP&CO), span between 1997 and 2012, and have a global distribution. Observations of the following variables were compiled: spectral remote-sensing reflectances, concentrations of chlorophyll a, spectral inherent optical properties and spectral diffuse attenuation coefficients. The data were from multi-project archives acquired via the open internet …

Hydrodynamic Variability In A Microtidal Coastal Bay Geographically Susceptible To North East Trade Winds, Israel Medina-Gómez, Cecilia Enríquez, Björn Kjerfve, Ismael Mariño, Jorge Herrera-Silveira

Gulf and Caribbean Research

The ecological integrity and overall health conditions of natural coastal systems are largely based upon the balance among physical processes. The objective of this study was to assess the effects of tides and winds on the water level variability, circulation patterns, and turnover time in Bahia de la Ascension (BA), a shallow, tropical coastal bay in the Mexican Caribbean prone to the influence of Trade winds due to its geographical location. The analysis of the hydrodynamics of BA using a 2D numerical model indicates that the tidal flow in the inlets and central basin of the bay vary by tidal …

A Statistical Model For The Prediction Of Dissolved Oxygen Dynamics And The Potential For Hypoxia In The Mississippi Sound And Bight, Andreas Moshogianis

Master's Theses

Hypoxia events occur when dissolved oxygen concentrations fall below the minimum threshold (dissolved oxygen concentrations < 2 mg O₂ L^-1) necessary to avoid respiratory distress among aquatic organisms. In the Mississippi Sound and Bight, hypoxia is most prevalent from late-spring through late summer. Since hypoxia events can have dramatic effects on coastal fisheries, the spatial and temporal magnitude of hypoxia presents a clear threat to the productive fisheries in the northern Gulf of Mexico. Long-term hydrographic data were collected from eight sampling stations on a monthly basis from January 2009 to December 2011 along a cross-shelf transect from the mouth of …

Macrobenthic Communities In The Northern Gulf Of Mexico Hypoxic Zone: Testing The Pearson-Rosenberg Model, Shivakumar Shivarudrappa

Dissertations

The Pearson and Rosenberg (P-R) conceptual model of macrobenthic succession was used to assess the impact of hypoxia (dissolved oxygen [DO] ≤ 2 mg/L) on the macrobenthic community on the continental shelf of northern Gulf of Mexico for the first time. The model uses a stress-response relationship between environmental parameters and the macrobenthic community to determine the ecological condition of the benthic habitat. The ecological significance of dissolved oxygen in a benthic habitat is well understood. In addition, the annual recurrence of bottom-water hypoxia on the Louisiana/Texas shelf during summer months is well documented.

The P-R model illustrates the decreasing …

The Distribution Of Dissolved Barium Along The U.S. Geotraces North Atlantic Transect: Impact Of Biogeochemical Processes, Circulation And Phase Association, Karen Renee Grissom

Master's Theses

During the last four decades, since the completion of the GEOSECS program, there has been a growing interest in the biogeochemical cycle of barium (Ba) due to its potential as a proxy for interpreting the geologic record. The typical barium distribution exhibits removal in the upper water column and regeneration at depth, consistent with its classification as a bio-intermediate element and similar to the nutrient-like profiles of silicic acid and alkalinity. To better constrain the uses of Ba, trace element clean samples were collected during the North Atlantic US GEOTRACES cruises.

The cycling of barium in the North Atlantic region …

Assessing Biogeochemical Impacts And Environmental Conditions Associated With Cross-Shelf High Chlorophyll Plumes In The Northern Gulf Of Mexico, Erin Brooke Jones

Dissertations

The northern Gulf of Mexico is a complex marine system subject to episodic physical phenomena such as loop current eddies. Flow fields generated by these eddies can result in cross-shelf exchanges between riverine influenced shelf waters and the offshore water column. This study considers the impacts of high chlorophyll plumes (HCPs) resulting from cross-shelf exchanges to the bio-optical properties of affected waters and how these plumes are influenced by their environment. The seasonal, interannual and decadal chlorophyll cycles of the Gulf of Mexico and the northern Gulf of Mexico are described to provide context for evaluating the ecological effects of …

Marine Snow Settling Velocities At An Oil Spill Site And A Control Site In The Northern Gulf Of Mexico, Clayton Hugh Dike

Master's Theses

After budgeting for response efforts and natural processes, over one million barrels of oil from the BP oil spill were unaccounted for. A hypothesis coined "The Dirty Blizzard" formed subsequent to observations of large and numerous oiled marine snow aggregates amidst the surface slick proposed that a large quantity of oil sank to depth via the aggregates. Having reached the seafloor, aggregates were subject to microbial degradation and to redistribution due to bottom currents. To assist in characterizing redistribution of particles near the seafloor, sediment traps, marine snow cameras, and acoustic Doppler current profilers (ADCPs) were deployed at two sites …

Improved Monitoring Of The Changjiang River Plume In The East China Sea During The Monsoon Season Using Satellite Borne L-Band Radiometers, Bumjun Kil

Dissertations

Measurement of sea surface salinity (SSS) from Satellite borne L-band (1.4 GHz, 21cm) radiometers (NASA Aquarius/SAC-D and ESA SMOS) in the East China Sea (ECS) is challenging due to the uncertainty of SSS caused by land thermal emissions in the antenna side lobes and because of strong radio frequency interference (RFI) due to illegally emitted man-made sources. RFI contamination in the ECS has gradually decreased because of the on-going international efforts to eliminate broadcasts in the protected L-band radio-astronomy frequency band. The present dissertation focuses on carefully eliminating the remaining RFI contamination in retrieved SSS, and masking out regions close …

Methane Dynamics In St. Louis Bay, Mississippi, Hannah Marie Roberts

Master's Theses

A method of dissolved methane analysis was developed utilizing cavity ring-down spectroscopy and headspace equilibration. Samples of 70 mL were collected in 140 mL plastic syringes and equilibrated with a methane free headspace. Reproducibility was high (i.e. 4% typical RSD), and samples were successfully measured in the low nanomolar to high micromolar range. During method development, multiple research cruises were undertaken in the northern Gulf of Mexico. Stations included the Orca Basin, the Deepwater Horizon site, and the surrounding area. The Deepwater Horizon site showed no continuing leakage from October 2010 to June 2013. Samples collected from the northern Gulf …

Effects Of Selective Grazing By Microzooplankton On Phytoplankton Composition In A Subtropical Estuary, Amanda Marie Mcgehee

Master's Theses

Rates of phytoplankton growth and microzooplankton grazing were measured at two locations within the Bay of St. Louis, MS, over the course of three months to explore the dynamics of the phytoplankton community. Community growth rates were estimated based on the changes in chlorophyll a (chl a) concentration using the dilution technique, (Landry and Hassett, 1982) and a C-specific rate was obtained using chl a labeling (Redalje and Laws, 1981). Concentrations of chl a were determined using high performance liquid chromatography (HPLC) and fluorometry. HPLC was also employed to obtain class specific growth and grazing rates, using either marker pigments …

Characterization Of Rain And Stormwater Nitrogen Inputs To The Mississippi Sound: A Landscape Approach, Joshua Michael Allen

Master's Theses

Urbanization in coastal watersheds is becoming an increasingly important issue in the world. Increased impervious surface cover, a factor of urbanization, has drawn more attention to stormwater runoff as a source of contamination to receiving waters. In this study, nitrogen species from rain and stormwater were analyzed across three different landscape types along the Mississippi Sound (hardened, residential, and pristine), as well as from drainage pipes that flow directly into to the Mississippi Sound. Nitrogen stable isotopes were used to trace the stormwater nitrogen to the surface waters and biota within the Sound.

The objective of this study was to …

Exploration Of Biophysical Interactions Associated With Mesoscale Variability In The Central Gulf Of Mexico, Katharine Celeste Woodard

Master's Theses

Bio-physical coupling in the Gulf of Mexico (GMx) is explored in this research using an integrated satellite sensor approach. Physical features are identified using Sea Level Anomaly (SLa) produced by Archiving, Validation, and Interpretation of Satellite Oceanographic data (AVISO). Biological characteristics of the GMx have been recognized as ocean color identified by the satellites SeaWiFS and MODISA. A climatology data set and a chlorophyll anomaly (CLa) was made using the 14-year mean determined from the ocean color files. The hypotheses are that there will be an inverse relationship between SLa and CLa, that mesoscale SLa features will significantly modulate local …

A Comprehensive Uncertainty Analysis And Method Of Geometric Calibration For A Circular Scanning Airborne Lidar, Michael Oliver Gonsalves

Dissertations

This dissertation describes an automated technique for ascertaining the values of the geometric calibration parameters of an airborne lidar. A least squares approach is employed that adjusts the point cloud to a single planar surface which could be either a narrow airport runway or a dynamic sea surface. Going beyond the customary three boresight angles, the proposed adjustment can determine up to eleven calibration parameters to a precision that renders a negligible contribution to the point cloud’s positional uncertainty.

Presently under development is the Coastal Zone Mapping and Imaging Lidar (CZMIL), which, unlike most contemporary systems that use oscillating mirrors …

Hierarchical Modeling: Biogeochemical Processes And Mechanisms That Drive Clay Nano-And Microfabric Development, Kenneth J. Curry, Richard H. Bennett, Paula J. Smithka, Matthew H. Hulbert

Faculty Publications

Conceptual scientific models of clay and clay fabric development can be constructed profitably by considering chemical and physical systems in terms of an ordered hierarchy. We develop here a hierarchical model of early stages of marine sediment development identifying processes and focusing on mechanisms. While the focus of our model is on mechanisms, the physical aspects of the hierarchy are cast in terms of the nanometer (nanofabric) level of organization of sediment fabric. This level is nested below the micrometer (microfabric) level that includes aggregates of clay signatures and is nested above the molecular level that includes edges and faces …

Monsoon-Driven Biogeochemical Processes In The Arabian Sea, Jerry D. Wiggert, Raleigh Hood, Karl Banse, John Kindle

Faculty Publications

Although it is nominally a tropical locale, the semiannual wind reversals associated with the Monsoon system of the Arabian Sea result annually in two distinct periods of elevated biological activity. While in both cases monsoonal forcing drives surface layer nutrient enrichment that supports increased rates of primary productivity, fundamentally different entrainment mechanisms are operating in summer (Southwest) and winter (Northeast) Monsoons. Moreover, the intervening intermonsoon periods, during which the region relaxes toward oligotrophic conditions more typical of tropical environments, provide a stark contrast to the dynamic biogeochemical activity of the monsoons. The resulting spatial and temporal variability is great and …