Oceanography Commons^™

Seasonal Dynamics In Fish Distribution And Abundance Revealed By An Acoustic Survey In Coastal Waters Of The Suzu Area, Kochi Prefecture, Japan, Yanhui Zhu, Kenji Minami, Yuka Iwahara, Kentaro Oda, Koichi Hidaka, Osamu Hoson, Koji Morishita, Sentaro Tsuru, Masahito Hirota, Hokuto Shirakawa, Kazushi Miyashita

Journal of Marine Science and Technology–Taiwan

For Japan's fishery, it is essential to conduct sustainable and efficient fishery owing to the decline in fish catch as well as the fisher population. To obtain information that contributes to sustainable and efficient fishery, we researched appropriate set-net locations with regard to fish distribution, abundance, and environmental characteristics. We conducted surveys from 2017/5 to 2018/2 in the Suzu coastal area, Kochi Prefecture, where the only main industry is set-net fishery. We investigated the seasonal relationships between fish school characteristics, including distribution and size, and marine environmental conditions in the Suzu coastal area, using a quantitative echo sounder (KSE300 SONIC, …

Development Of A Biomass Assessment Method Using Fisheries Echo Sounder For Monitoring Whitebait Fishery In Shizuoka Prefecture, Japan, Kenichi Kobayashi, Yanhui Zhu, Daichi Oshiyama, Kenji Minami, Hokuto Shirakawa, Kazushi Miyashita

Journal of Marine Science and Technology–Taiwan

Coastal fisheries constitute the second most important sector in fishery production in Japan, following offshore fisheries. Thus, spatial evaluation of coastal fishing grounds and understanding of the changes in biomass are important for the sustainable use of fishing resources. For the assessment of spatial fish biomass, a quantitative echo sounder is used, but such a device is not mass produced and involves a high cost. In the present study, we examined the feasibility of biomass assessment using typical commercial fisheries echo sounders that are widely used and cheaper than quantitative echo sounders. Therefore, we aimed to verify the validity of …

Acoustic Survey For Estimating Density Of Anchovy Schools In The South Sea Of Korea, Eunbi Min, Eun-A Yoon, Sung-Tae Kim, Seong Yong Moon, Hyun Woo Kim, Shelly Salim, Taejong Kang, Doo-Jin Hwang

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Estimating The Sampling Efficiencies Of A Framed Midwater Trawl And Ring Net For Zooplankton Using An Acoustic Method, Zhen Lu, Tohru Mukai, Yasuzumi Fujimori, Kohji Iida

Journal of Marine Science and Technology–Taiwan

It is well known that there is bias using different sampling gear, such as a framed midwater trawl (FMT) and a ring net, when measuring the density and length distribution of target species. This limit is characterized by the sampling efficiency of the gear. Acoustic monitoring can be used to determine the sampling efficiencies of this gear, as its noninvasive, wide-range sweeps provide more reliable estimates of absolute abundance of the target species. The density measured by the gear can then be standardized by multiplying the initial density measurement by the derived sampling efficiency. In this study, we compared the …

In Situ Broadband Acoustic Measurements Of Age-0 Walleye Pollock And Pointhead Flounder In Funka Bay, Hokkaido, Japan, Kohei Hasegawa, Naizheng Yan, Tohru Mukai

Journal of Marine Science and Technology–Taiwan

Measurements of the broadband acoustic backscattering from fish should improve acoustic discrimination between species. The pulse compression processing of broadband systems can be used to measure acoustic backscattering with high range resolution and improve signal-to-noise ratio. This may increase opportunities for in situ target strength (TS) measurements, the preferred method of collecting TS data. To evaluate the availability of TS spectra for acoustic discrimination, three Simrad EK80 wideband transceivers and split-beam transducers of 70, 120, and 200 kHz were used to collect in situ frequency responses of TS from age-0 juvenile walleye pollock and pointhead flounder, a swimbladderless flat-fish, distributed …

Volume Scattering And Echo Integration In Fisheries Acoustics Revisited, Masahiko Furusawa

Journal of Marine Science and Technology–Taiwan

Echo integration is the most important method in fisheries acoustics. The basis of the method is volume scattering theory, and the theory assumes that many fish are randomly and homogeneously distributed broader than a beam spread. In actual acoustic surveys, however, we encounter various distributions for which these assumptions do not hold. It is the echo integration method that hypothetically fulfills these assumptions. In this paper, we review the volume scattering theory and the echo integration method historically and theoretically and confirm their bases. We then point out some misunderstandings affected by historical constraints such as the persistence of time …

Alexandrium In The Arctic: Are Harmful Algae Spreading As The Arctic Warms?, Sveinn Einarsson, Kate Lowry, Robert Pickart, Karin Ashjian, P. Dreux Chappell

College of Sciences Posters

Alexandrium tamerense is a well-studied dinoflagellate known for its ability to produce the neurotoxin that causes paralytic shellfish poisoning. Until 1970 Alexandrium tamerense was only found in Europe, North America, and Japan but has been increasingly found all over the globe. Alexandrium is characteristically found in temperate and subtropical regions and as the Arctic warms, there is considerable concern that it may be expanding into the Arctic. We found Alexandrium tamerense during a research expedition to the Alaskan Beaufort Sea shelf to study upwelling. Upwelling events are known to support seasonal blooms of phytoplankton, which are important primary producers at …

Seasonal Variability In Diazotroph Abundance And Gene Expression At A Coastal N2 Fixation Hotspot (Outer Banks, Nc), Katherine Crider, Corday Selden, Kimberly Powell, P. Dreux Chappell

College of Sciences Posters

Marine microbial dinitrogen (N₂) fixation, the conversion of gaseous N₂ to bioavailable species, is the primary source of new oceanic nitrogen (N). N is present in nucleic acids, amino acids, and proteins, and is essential to all life. Long considered to be a primarily oligotrophic ocean process, significant N₂ fixation rates have recently been observed in coastal environments, including along the Cape Hatteras front. To see if elevated N₂ fixation was a persistent feature in this region, N₂ fixation rates and N₂ fixer (diazotroph) abundance and gene expression were investigated through roughly monthly …

Implications Of Increased Sst On Sula Dactylatra In Rapa Nui Marine Park, Flavia Soctto D'Antuono, Hayden E. Dubniczki

Student Publications

Marine protected areas are a relatively new conservation tool intended to remove harmful anthropogenic practices and influences to enable ecological processes to occur normally, but they cannot protect ecosystems from global impacts like climate change. One such MPA, Rapa Nui Marine Park in Chile, is home to the Masked Booby, Sula dactylatra. Though not currently endangered, their population numbers decrease annually, and seabirds are among the most threatened species in the face of climate change. This study seeks to examine the spatial ecology of the Sula dactylatra against the context of the MPA and examines whether increasing sea surface temperatures …

Thermoelectric Generation And Thermophysical Properties Of Metal Oxide Nanofluids, Xinran Hou, Rong-Tsu Wang, Shaowen Huang, Jung-Chang Wang

Journal of Marine Science and Technology–Taiwan

This study describes the comprehensive characterization of the diverse water-based nanofluids involving aluminum oxide, titanium dioxide, and zinc oxide nanoparticles, which were prepared through the two-step synthesis method assisted by a microemulsion ultrasound skill with effects of both weight-percent concentration (wt.%) in the range of 1.0% and 5.0% and between 20 ^oC and 40 ⁰C. The mean cluster size, zeta potential, pH value, viscosity, thermal conductivity, absorbance, light absorption, and electrical charge density of the various nanofluids were surveyed by relative experiments. The results showed that the 2 wt.% Al₂O₃, 2 wt.% TiO_{2 …}

Wireless Sensor Network-Based Monitoring Of Bridge Pile Foundations For Detecting Scouring Depth, Han-Tang Huang, H. Ping Tserng, Ruei-Yu Hou, Mirosław Skibniewski

Journal of Marine Science and Technology–Taiwan

Climate change brings about unprecedented increases in the occurrence of storms and flooding. In response to increased risk of bridge pier scouring, there is a need for increased safety monitoring of bridges. This paper presents a wireless sensor network (WSN) - based solution developed to measure micro-vibrations of a bridge pier. Test measurement values are converted with the use of the Fast Fourier Transform (FFT) method to obtain natural frequencies. Scouring depth of the pier is estimated with the use of a Finite Element Method model. WSN is used to collect the signal and to test data transmission stability in …

A New Fuzzy Dea Model For Solving The Mcdm Problems In Supplier Selection, Chi-Mao Tsai, Hsuan-Shih Lee, Guo-Ya Gan

Journal of Marine Science and Technology–Taiwan

Supplier selection is a crucial task in supply chain management, and good supply chain management is essential to a company's ability to develop sustainably and gain the trust and satisfaction of its customers. In modern supply chain management, supplier selection often takes the form of a multi-criteria decision-making (MCDM) problem. Thus, to solve this problem, this study formulated a novel fuzzy MCDM model, which is based on the fuzzy data envelopment analysis model. This novel approach can transform the linguistic variables of assessment criteria into well-founded quantitative data for calculation. Moreover, our approach can effectively discriminate between decision-making units (both …

Evaluation Of The Human Discomfort Caused By Ship Vibrations, Laurentiu Picu, Eugen Rusu

Journal of Marine Science and Technology–Taiwan

The present work analyzes the subjective responses of people exposed to transient vibrations caused by systems with a single degree of freedom. In this context, the main objective of the research was to identify the main effect of vibrations on people's well-being at work (in particular on vessels crew) and to discover those frequencies that lead to the greatest discomfort. In order to achieve this goal, 12 laboratory experiments were carried out involving ten male subjects in good health, aged between 28 and 42. The variables of the vibratory system considered are: acceleration (4.8 ÷ 8.6 m/s¡2), amplitude (1 ÷ …

Application Of Physically Based Semi-Distributed Hec-Hms Model For Flow Simulation In Tributary Catchments Of Kaohsiung Area Taiwan, Fiaz Hussain, Ray-Shyan Wu, Kai-Chun Yu

Journal of Marine Science and Technology–Taiwan

Hydrologic modeling is a commonly used tool to understand the rainfallerunoff processes of gauged and ungauged catchments for proper quantitative estimation of water resources availability. In the present study, an attempt is made to simulate surface runoff using a physically based semi-distributed hydrological (HEC-HMS) model for four local-scale tributary catchments of Kaohsiung area Taiwan. The input physical parameters of the model were calculated and preprocessed in HEC-GeoHMS based on digital elevation model (DEM), land use, soil and hydro-meteorological data. The model performance was satisfactory with Nash Sutcliffe Efficiency (NSE) ¼ 0.51 to 0.86 and the coefficient of determination (R2) ¼ …

Evaluating Key Factors Of Container Shipping Lines From The Perspective Of High-Tech Industry Shippers, Chien-Lung Hsu, Tien-Chun Ho

Journal of Marine Science and Technology–Taiwan

Because of the changes in customers' needs and demands created by the development of container transport in the 1960s, the global container transport business has become increasingly competitive. With the high-tech industry ranged with one of the few competitive industries in Taiwan from 2002, container shipping lines have been forced to implement innovative operating patterns to meet the evolving demands of the high-tech industry shippers. This study conducts a survey questionnaire of domestic high-tech industry shippers to explore the different factors affecting their selection of container shipping lines, evaluating the key influencing factors by maritime marketing's 4C framework: customer needs, …

Beach Topography Surveying Using Unmanned Aerial Vehicle Photogrammetry Technology, Hui-Ming Fang, Kuan-Tsung Chang, Sung-Shan Hsiao, Shih-Peng Chiang

Journal of Marine Science and Technology–Taiwan

The mechanisms of in situ topography changes must be identified for spatial planning in coastal areas. In this study, the authors used in situ direct measurement methods and indirect remote-sensing technologies to develop a method for beach topography surveillance. Unmanned aerial vehicles (UAVs) have advantages of high portability and mobility and low operating altitude. Therefore, a UAV was equipped with a lightweight camera and a positioning system that comprised a global positioning system and an inertial measurement unit. Aerial photogrammetry and aerial triangu-lation methods were adopted for matching image feature points to obtain the corresponding topographic points in the sand. …

Seasonal Controls On Nearshore Hypoxia In A Small Coastal Embayment, Stephen Alexander Huie

Physics

Dissolved oxygen (DO) is an important biogeochemical factor that strongly influences nearshore coastal ecosystems. Low DO (hypoxic) events can cause physiological stressful environments for ecological and economically important species, potentially leading to mass mortalities. In order to better assess drivers of coastal hypoxia, we collected data from monthly cruises on the inner shelf and nearshore moorings inside and outside a small coastal embayment (San Luis Obispo Bay on the Central California Coast) across the full upwelling season (March to August). During the late spring and early summer, we found that the nearshore near-bottom temperature-DO (T-DO) relationship aligned with the shelf …

Developing A Method To Track Marine Snow Aggregation Through Individual Collisions Using Stereoscopic Imaging, Riley Henning

Theses

The aggregation of individual phytoplankton into marine snow allows particles to sink more quickly, thus resulting in the transport of particulate organic carbon from surface waters to the deep ocean. Aggregate formation has previously been measured in experiments indirectly by quantifying how particle size or particle concentration changes over time. Here, I present my thesis in which I applied high-resolution imaging to quantify aggregate formation using two different methodologies.

We conducted experiments to investigate aggregate formation using stereoscopic imaging, tracking individual particles directly in a 3D volume. Phytoplankton cultures were rolled in cylindrical tanks and imaged by two cameras illuminated …

Atlantic Sailfish (Istiophorus Albicans) Distribution Off The East Coast Of Florida From 2003 To 2018 In Response To Sea Surface Temperature, Meredith M. Pratt

Mako: NSU Undergraduate Student Journal

The Atlantic sailfish (Istiophorus albicans) ranges from 40°N to 40°S in the Western Atlantic Ocean and has great economic and recreational value for sport fishers. Off the east coast of Florida, recreational fishing boats often target this species due to its size, speed and strength. This project aimed to determine the relationship between sea surface temperature (SST) and the distribution of Atlantic sailfish caught and released over a fifteen-year period (2003 to 2018). Tagging information was collected from The Billfish Foundation and NOAA who have the most extensive programs for billfish. Using the time and location of each …

Resolving Variability In Size Structure In An Individual-Based Model For The North Pacific Krill, Euphausia Pacifica, Roxanne Robertson

Cal Poly Humboldt theses and projects

Individual-based models (IBMs) have emerged as a powerful tool for ecological research and are particularly well suited to studies of plankton ecology. In this thesis, I develop an IBM for the North Pacific krill, Euphausia pacifica, with the goal of replicating observed variability in size-structure in the northern California Current Ecosystem. Krill, and E. pacifica in particular, are central to the structure and function of the California Current Ecosystem. Their response to environmental forcing translates climate variability to higher trophic levels and underpins broader ecosystem responses. Recent observations indicate environmental and climate-related shifts in E. pacifica size distributions, which …

Trichome Lengths Of The Heterocystous N2-Fixing Cyanobacteria In The Tropical Marginal Seas Of The Western North Pacific, Sing-How Tuo, Margaret R. Mulholland, Yukiko Taniuchi, Houng-Yung Chen, Wann-Neng Jane, Yen-Huei Lin, Yuh-Ling Lee Chen

OES Faculty Publications

Calothrix rhizosoleniae and Richelia intracellularis are heterocystous cyanobacteria found in the tropical oceans. C. rhizosoleniae commonly live epiphytically on diatom genera Chaetoceros (C-C) and Bacteriastrum (B-C) while R. intracellularis live endosymbiotically within Rhizosolenia (R-R), Guinardia (G-R), and Hemiaulus (H-R); although, they occasionally live freely (FL-C and FL-R). Both species have much shorter trichomes than the other marine filamentous cyanobacteria such as Trichodesmium spp. and Anabaena gerdii. We investigated the trichome lengths of C. rhizosoleniae and R. intracellularis in the South China Sea (SCS) and the Philippine …

Lagrangian Betweenness As A Measure Of Bottlenecks In Dynamical Systems With Oceanographic Examples, Enrico Ser-Giacomi, Alberto Baudena, Vincent Rossi, Mick Follows, Sophie Clayton, Ruggero Vasile, Cristóbal López, Emilio Hernández-García

OES Faculty Publications

The study of connectivity patterns in networks has brought novel insights across diverse fields ranging from neurosciences to epidemic spreading or climate. In this context, betweenness centrality has demonstrated to be a very effective measure to identify nodes that act as focus of congestion, or bottlenecks, in the network. However, there is not a way to define betweenness outside the network framework. By analytically linking dynamical systems and network theory, we provide a trajectory-based formulation of betweenness, called Lagrangian betweenness, as a function of Lyapunov exponents. This extends the concept of betweenness beyond the context of network theory relating hyperbolic …

Marine Phytoplankton Functional Types Exhibit Diverse Responses To Thermal Change, S. I. Anderson, A. D. Barton, Sophie Clayton, S. Dutkiewicz, T. A. Rynearson

OES Faculty Publications

Marine phytoplankton generate half of global primary production, making them essential to ecosystem functioning and biogeochemical cycling. Though phytoplankton are phylogenetically diverse, studies rarely designate unique thermal traits to different taxa, resulting in coarse representations of phytoplankton thermal responses. Here we assessed phytoplankton functional responses to temperature using empirically derived thermal growth rates from four principal contributors to marine productivity: diatoms, dinoflagellates, cyanobacteria, and coccolithophores. Using modeled sea surface temperatures for 1950-1970 and 2080-2100, we explored potential alterations to each group's growth rates and geographical distribution under a future climate change scenario. Contrary to the commonly applied Eppley formulation, our …

Lipid Markers And Compound-Specific Carbon Isotopes As Diet And Biosynthesis Reflectors In The Northern Neptune Whelk Neptunea Heros, H. Rodger Harvey, Rachel Mcmahon, Karen A. Taylor

OES Faculty Publications

A suite of lipid biomarkers plus compound-specific carbon isotopes of major sterols were determined in muscle tissues across increasing sizes of northern Neptune whelks Neptunea heros, developing eggs and potential diets to link trophic patterns, metabolism and carbon sources on the Chukchi Sea shelf. Analysis of primary prey included the northern clam Astarte borealis, water column particulate organic matter (POM) and surface sediments near the collection sites. Sterols specific to major algal groups along with algal-derived polyunsaturated fatty acids (C20:5n-3, C20:4n-3, C22:6n-3) in whelk muscle tissue reflected the importance of algal primary production to benthic consumers and its …

Impact Of Ocean Carbonation On Long-Term Regulation Of Light Harvesting In Eelgrass Zostera Marina, Billur Celebi-Ergin, Richard C. Zimmerman, Victoria J. Hill

OES Faculty Publications

Seagrasses account for approximately 10% of the total carbon stored in the ocean, although photosynthesis of seagrasses is carbon-limited at present oceanic pH levels. Therefore, increasing atmospheric CO₂ concentration, which results in ocean acidification/carbonation, is predicted to have a positive impact on seagrass productivity. Previous studies have confirmed the positive influence of increasing CO₂ on photosynthesis and survival of the temperate eelgrass Zostera marina, but the acclimation of photoprotective mechanisms in this context has not been characterized. We aimed to quantify the long-term impacts of ocean acidification on photochemical control mechanisms that promote photosynthesis while simultaneously protecting …

Detrital Neodymium And (Radio)Carbon As Complementary Sedimentary Bedfellows? The Western Arctic Ocean As A Testbed, Melissa S. Schwab, Jörg D. Rickli, Robie W. Macdonald, H. Rodger Harvey, Negar Haghipour, Timothy I. Eglinton

OES Faculty Publications

Interactions between organic and detrital mineral phases strongly influence both the dispersal and accumulation of terrestrial organic carbon (OC) in continental margin sediments. Yet the complex interplay among biological, chemical, and physical processes limits our understanding of how organo-mineral interactions evolve during sediment transfer and burial. In particular, diverse OC sources and complex hydrodynamic processes hinder the assessment of how the partnership of organic matter and its mineral host evolves during supply and dispersal over continental margins. In this study, we integrate new and compiled sedimentological (grain size, surface area), organic (%OC, OC-δ¹³C, OC-F¹⁴C), and inorganic …

A Recirculating Eddy Promotes Subsurface Particle Retention In An Antarctic Biological Hotspot, Katherine L. Hudson, Matthew John Oliver, Josh Kohut, Michael S. Dinniman, J. M. Klinck, Carlos Moffat, Hank Statscewich, Kim S. Bernard, William Fraser

OES Faculty Publications

Palmer Deep Canyon is one of the biological hotspots associated with deep bathymetric features along the Western Antarctic Peninsula. The upwelling of nutrient-rich Upper Circumpolar Deep Water to the surface mixed layer in the submarine canyon has been hypothesized to drive increased phytoplankton biomass productivity, attracting krill, penguins and other top predators to the region. However, observations in Palmer Deep Canyon lack a clear in-situ upwelling signal, lack a physiological response by phytoplankton to Upper Circumpolar Deep Water in laboratory experiments, and surface residence times that are too short for phytoplankton populations to reasonably respond to any locally upwelled nutrients. …

Elevating Dissolved Oxygen—Reflections On Developing And Using Long-Term Data, Nancy N. Rabalais

Gulf and Caribbean Research

This prospectus took me about as long to generate as my 36—year record of working on the issue of northern Gulf of Mexico (nGOM) oxygen deficiency, or so I felt. There was so much to cover, but I focused on the issue of hypoxia on the Louisiana continental shelf from the early 1980s to present and my participation in the research and outreach. Not that I was ignoring other aspects of my academic research career (e.g., stone crab populations and their differences in physiology and larval development along the nGOM coast; settlement of crab megalopae, especially blue crabs, on artificial …

Variation In Coral Thermotolerance Across A Pollution Gradient Erodes As Coral Symbionts Shift To More Heat-Tolerant Genera, Melissa S. Naugle, Thomas A. Oliver, Daniel J. Barshis, Ruth D. Gates, Cheryl A. Logan

Biological Sciences Faculty Publications

Phenotypic plasticity is one mechanism whereby species may cope with stressful environmental changes associated with climate change. Reef building corals present a good model for studying phenotypic plasticity because they have experienced rapid climate-driven declines in recent decades (within a single generation of many corals), often with differential survival among individuals during heat stress. Underlying differences in thermotolerance may be driven by differences in baseline levels of environmental stress, including pollution stress. To examine this possibility, acute heat stress experiments were conducted on Acropora hyacinthus from 10 sites around Tutuila, American Samoa with differing nutrient pollution impact. A threshold-based heat …

Response Of Coastal Ichthyoplankton Assemblages Off Northern California To Seasonal Oceanographic And Climate Variability, Blair M. Winnacott

Cal Poly Humboldt theses and projects

This study analyzed samples collected along the Trinidad Head Line (41°N) to characterize variability in the ichthyoplankton assemblage in coastal waters off northern California from late 2007 through 2019, a period during which a major marine heatwave (MHW; late 2014-16) strongly perturbed the ecosystem. I augmented visual identification with genetic techniques to resolve the species composition of visually cryptic larval rockfishes (Sebastes spp.). While taxonomic composition off northern California was largely similar to studies off Oregon and Washington, and cross-shelf structure and seasonal patterns in species’ abundance were generally consistent with the distribution and phenology of parental stocks, interannual …