Oceanography Commons^™

Mapping Michigan's Historic Coastlines, Ryan A. Williams

Dissertations, Master's Theses and Master's Reports

This five-year project, sponsored by the Michigan Department of Environment, Great Lakes, and Energy, is working to map how Michigan’s Great Lakes shorelines have changed over the past 80+ years. Products of this project include publicly available digital, georeferenced, historic aerial photography datasets, as well as map layers depicting the locations of historic shorelines and bluff lines from 1938, 1980, 2009, 2016, 2018, and 2020. Additional products include bluff retreat risk areas, shoreline rate of change map layers, and tools to assist in the development of future Coastal Vulnerability Index projects for the Great Lakes. All products are available as …

Factors Determining Seagrass Blue Carbon Across Bioregions And Geomorphologies, Ines Mazarrasa, Paul Lavery, Carlos M. Duarte, Anna Lafratta, Catherine E. Lovelock, Peter I. Macreadie, Jimena Samper-Villarreal, Cristian Salinas, Christian J. Sanders, Stacey Trevathan-Tackett, Mary Young, Andy Steven, Oscar Serrano

Research outputs 2014 to 2021

Seagrass meadows rank among the most significant organic carbon (C_org) sinks on earth. We examined the variability in seagrass soil C_org stocks and composition across Australia and identified the main drivers of variability, applying a spatially hierarchical approach that incorporates bioregions and geomorphic settings. Top 30 cm soil C_org stocks were similar across bioregions and geomorphic settings (min-max: 20–26 Mg C_org ha⁻¹), but meadows formed by large species (i.e., Amphibolis spp. and Posidonia spp.) showed higher stocks (24–29 Mg C_org ha⁻¹) than those formed by smaller species (e.g., Halodule, Halophila, …

Coral Oxygen Isotopic Records Capture The 2015/2016 El Niño Event In The Central Equatorial Pacific, Gemma K. O'Connor, Kim M. Cobb, Hussein R. Sayani, Alyssa R. Atwood, Pamela R. Grothe, Samantha Stevenson, Et. Al.

Earth and Environmental Sciences

Coral oxygen isotopes (δ18O) from the central equatorial Pacific provide monthly resolved records of El Niño-Southern Oscillation activity over past centuries to millennia. However, calibration studies using in situ data to assess the relative contributions of warming and freshening to coral δ18O records are exceedingly rare. Furthermore, the fidelity of coral δ18O records under the most severe thermal stress events is difficult to assess. Here, we present six coral δ18O records and in situ temperature, salinity, and seawater δ18O data from Kiritimati Island (2°N, 157°W) spanning the very strong 2015/16 El Niño event. Local sea surface temperature (SST) anomalies of …

Elevating Dissolved Oxygen—Reflections On Developing And Using Long-Term Data, Nancy N. Rabalais

Gulf and Caribbean Research

This prospectus took me about as long to generate as my 36—year record of working on the issue of northern Gulf of Mexico (nGOM) oxygen deficiency, or so I felt. There was so much to cover, but I focused on the issue of hypoxia on the Louisiana continental shelf from the early 1980s to present and my participation in the research and outreach. Not that I was ignoring other aspects of my academic research career (e.g., stone crab populations and their differences in physiology and larval development along the nGOM coast; settlement of crab megalopae, especially blue crabs, on artificial …

Variation In Coral Thermotolerance Across A Pollution Gradient Erodes As Coral Symbionts Shift To More Heat-Tolerant Genera, Melissa S. Naugle, Thomas A. Oliver, Daniel J. Barshis, Ruth D. Gates, Cheryl A. Logan

Biological Sciences Faculty Publications

Phenotypic plasticity is one mechanism whereby species may cope with stressful environmental changes associated with climate change. Reef building corals present a good model for studying phenotypic plasticity because they have experienced rapid climate-driven declines in recent decades (within a single generation of many corals), often with differential survival among individuals during heat stress. Underlying differences in thermotolerance may be driven by differences in baseline levels of environmental stress, including pollution stress. To examine this possibility, acute heat stress experiments were conducted on Acropora hyacinthus from 10 sites around Tutuila, American Samoa with differing nutrient pollution impact. A threshold-based heat …

Monitoring 2019 Bonnet Carré Spillway Impacts - Final Report, J. Read Hendon, Jerry D. Wiggert, Jill Hendon

Faculty Publications

Due to the multiple and extended openings of the Bonnet Carré Spillway in 2019, the University of Southern Mississippi (USM) was tasked by the Mississippi Department of Marine Resources to conduct ecological sampling in the Mississippi Sound and adjacent waters. in an effort to better understand the impacts of the extensive freshwater diversion of Bonnet Carré Spillway operations on Mississippi's coastal and marine resources. The period of performance for this project was June 1, 2019, to August 31, 2019. This technical report summarizes the three months of weekly surveys and analyses, over June - August 2019, conducted by the University …

The Life History And Population Dynamics Of Southern Flounder, Kenneth A. Erickson

LSU Master's Theses

Southern Flounder, Paralichthys lethostigma, are a coastal, estuarine-dependent flatfish species that inhabits the Southeastern US Atlantic Ocean and Gulf of Mexico. Throughout their range, Southern Flounder are exploited by both commercial and recreational fisheries. Recently, numerous sources have expressed concerns about Southern Flounder populations, with stock assessments indicating declines in spawning stock biomass and recruitment. To estimate life history traits needed for informed management, such as age, growth, and maturity, I collected 327 Southern Flounder from Louisiana and obtained 14,184 historical records from the Louisiana Department of Wildlife and Fisheries. Using a von Bertalanffy growth equation in a Bayesian …

Trace Metals And The Environment: Studying The Behaviour Of Iceland’S Glacially Sourced Trace Metals, Owen Bailey

Independent Study Project (ISP) Collection

Trace metal contamination in marine ecosystems is a problem for every trophic level, from zooplankton up to humans. The mobility and uptake availability of these metals depend on such environmental parameters as salinity, temperature, and pH, among others. To explore the effects of varying parameters on dissolved metal behaviour, I studied the Jökulsárlón glacial lagoon, into which the Breidamerkurjökull glacier deposits trace metals from volcanic ash through glacial melt. In this study I develop and follow a sampling procedure to analyze trace metal concentrations in the lagoon, while additionally discussing the behaviour and impact of trace metals, focusing on cadmium, …

Water Quality Assessment In The Occurrence Of Acanthaster Spp. (Crown-Of-Thorns Starfish, Cots) On Coral Reefs In Menjangan Island, Bali, Indonesia, Novia Arinda Pradisty, Eghbert Elvan Ampou, Rizki Hanintyo

Makara Journal of Science

Aquatic stressors are known to cause biological impairment that can result in biodiversity loss in several Marine Protected Areas (MPA), including in Menjangan Island, West Bali National Park. The objectives of this study were to correlate the changes in water quality parameters with the biological effect of Crown-of-Thorns starfish (CoTS) population dynamics and to assess the most applicable parameters for continuous environmental monitoring. Field observations and surveys were conducted three times in 2017, during the wet season, dry season and season transition, in order to assess the effect of seasonal variability. Redundancy Analysis (RDA) was performed to determine the relationship …

Prioritizing The Largest, Oldest Corals For Disease Intervention In A Coral Disease-Ravaged Area: Southeast Florida Coral Reef Ecosystem Conservation Area, Alysha Brunelle

All HCAS Student Capstones, Theses, and Dissertations

Coral diseases appear to be more devastating than ever before. When a virulent disease ravages a coral ecosystem, it can significantly change the population’s demographics and cause local extinctions. Disease intervention response during such an event is impossible at a landscape scale, therefore priorities must be considered. Saving the largest, oldest colonies of reef-building species is a good choice due to their high fecundity and ecological function. Their size, as a proxy for age, is an indicator of their resistance to previous perturbations which may indicate higher fitness. Their size also provides habitat to many organisms and wave resistance in …

The Source Detection Of 28 September 2018 Sulawesi Tsunami By Using Ionospheric Gnss Total Electron Content Disturbance, Jann-Yenq Liu, Chi-Yen Lin, Yuh-Ing Chen, Tso-Ren Wu, Meng-Ju Chung, Tien-Chi Liu, Yu-Lin Tsai, Loren C. Chang, Chi-Kuang Chao, Dimitar Ouzounov, Katsumi Hattori

Mathematics, Physics, and Computer Science Faculty Articles and Research

The 28 September 2018 magnitude Mw7.8 Palu, Indonesia earthquake (0.178° S, 119.840° E, depth 13 km) occurred at 10:02 UTC. The major earthquake triggered catastrophic liquefaction, landslides, and a near-field tsunami. The ionospheric total electron content (TEC) derived from records of 5 ground-based global navigation satellite system (GNSS) receivers is employed to detect tsunami traveling ionospheric disturbances (TTIDs). In total, 15 TTIDs have been detected. The ray-tracing and beamforming techniques are then used to find the TTID source location. The bootstrap method is applied in order to further explore the possible location of the tsunami source based on results of …

Algal Coverage Detection And Classification Using Envi: Correlation With Dissolved Oxygen Levels In Elkhorn Slough, Ca, Jason Dawson

All HCAS Student Capstones, Theses, and Dissertations

Estuaries are exposed to varying stressors, whether they be physical, chemical, or environmental. The most notable of stressors is eutrophication of coastal and inland ecosystems. This is a result of increased supply of nutrients fueling production within the system. One outcome of this increased nutrient load to the system is that of algal blooms. These blooms can impact the aesthetic appearance and degrade the quality of health of the system. Many of these coastal zones and waterways are critical habitats for many biological (some endangered) species and serve as recreational areas for human populations. Elkhorn Slough, California is one of …

Statement Of World Aquatic Scientific Societies On The Need To Take Urgent Action Against Human-Caused Climate Change, Based On Scientific Evidence [Dear Colleague Letter], Scott A. Bonar, Brian R. Murphy, Leanne H. Roulson, Jesse T. Trushenski, Douglas J. Austen, Michael Edward Douglas

United States Fish and Wildlife Service: Publications

Dear Colleague Letter from the American Fisheries Society to fellow scientific societies, July 25, 2020, about the urgent need for responsive collective action to mitigate impending radical climate change. Includes the Statement of World Aquatic Scientific Societies on the Need to Take Urgent Action Against Human-Caused Climate Change, Based on Scientific Evidence, emphasizing the importance of aquatic ecosystems. Includes extensive citations and notes.

"Water is the most important natural resource on Earth as it is vital for life. Aquatic ecosystems, freshwater or marine, provide multiple benefits to human society, such as provisioning of oxygen, food, drinking water, genetic resources; regulation …

Phosphorus Variability In The Area Of Influence Of The Mid-Barataria Sediment Diversion, Peter Mates

LSU Master's Theses

Man-made levees along the lower Mississippi River prevent delivery of sediment from building and maintaining Louisiana’s coastal wetlands. The Mid-Barataria sediment diversions is designed to reintroduce Mississippi River water, sediment, and nutrients into the sediment-starved Barataria Basin. Phosphorus (P) is an important macronutrient for regulating primary production in coastal marine ecosystems. Wetlands can serve as a sink or source for phosphorus to the overlying water column through various retention and release processes, dependent on concentration. Louisiana coastal systems can be phosphorus limited due to much higher concentrations of bioavailable Nitrogen in river water. The high soluble molar N:P ( >50:1) …

Identification And Quantification Of Microplastic Pollution In Water Samples And Four Species Of Fish From The Mississippi River, Kerrin E. Toner

LSU Master's Theses

Microplastics (£5 mm) have become a persistent anthropogenic pollutant and a growing environmental concern with evidence of them being found throughout several ecosystems. In recent years, there has been a growing recognition that rivers play a major role in transporting plastics from the land to the sea. The Mississippi River is the largest river in North America, draining land populated by over 100 million people. With high numbers of microplastics found in the waters of the northern of the Gulf of Mexico, it is likely that the Mississippi River is the primary source of these plastics. This study quantifies and …

Long-Term Ndvi And Recent Vegetation Cover Profiles Of Major Offshore Island Nesting Sites Of Sea Turtles In Saudi Waters Of The Northern Arabian Gulf, Rommel H. Maneja, Jeffrey D. Miller, Wenzhao Li, Hesham El-Askary, Ace Vincent B. Flandez, Joshua J. Dagoy, Joselito Francis A. Alcaria, Abdullajid U. Basali, Khaled A. Al-Abdulkader, Ronald A. Loughland, Mohamed A. Qurban

Mathematics, Physics, and Computer Science Faculty Articles and Research

Vegetation is an important ecological component of offshore islands in the Arabian Gulf (AG), which maintains long-term resilience of these islands. This is achieved by influencing sediment retention and moisture acquisition via condensation during periods of high humidity and by providing a variety of microhabitats for island fauna. The resilience of offshore islands’ ecosystems in the Saudi waters is important because they host the largest number of nesting hawksbill and green turtles in the AG. This study defines the characteristics and the long-term trends in vegetation cover of the offshore islands used by sea turtles as nesting grounds in the …

Seasonal Transport Of Dissolved Inorganic Carbon And Total Alkalinity Across The Louisiana Shelf, Michelle M. Anderson

LSU Master's Theses

Rivers and wetlands are a major source of terrestrial derived carbon for coastal ocean margins. Unfortunately, Louisiana’s wetlands are threatened by ongoing high rates of erosion, deterioration, and unprecedented rates of river water discharge that changes seasonally, leading to a net loss of terrestrial carbon into the northern Gulf of Mexico (nGOM). There exists a current lack of understanding about the distribution of dissolved inorganic carbon (DIC) and total alkalinity (TAlk) within the shallowest regions of the Louisiana shelf. Even less is known about how the transport of DIC alters seasonally with changes in river outflow and shelf currents. Quantifying …

Microplastics In Mississippi River Fishes: A Watershed Approach, Ahmed Gad

LSU Master's Theses

Microplastics are plastic particles less than 5mm that come from different sources, such as industrial products, cosmetics, and the breakdown of the macroplastics. Microplastics derive from terrestrial sources but concentrate in flowing freshwaters where they may enter aquatic food webs. The northern Gulf of Mexico has shown very high microplastic concentrations, which are assumed to be sourced from the Mississippi River and its watershed. This study seeks to study microplastics in fish in the Mississippi River and the Gulf of Mexico. Fish stomachs and intestines from fish underwent chemical digestion, filtration, and microplastics identification and enumeration through FT-IR spectrometry. Chapter …

Synergistic Use Of Remote Sensing And Modeling For Estimating Net Primary Productivity In The Red Sea With Vgpm, Eppley-Vgpm, And Cbpm Models Intercomparison, Wenzhao Li, Surya Prakash Tiwari, Hesham El-Askary, Mohamed Ali Qurban, Vassilis Amiridis, K. P. Manikandan, Michael J. Garay, Olga V. Kalashnikova, Thomas C. Piechota, Daniele C. Struppa

Mathematics, Physics, and Computer Science Faculty Articles and Research

Primary productivity (PP) has been recently investigated using remote sensing-based models over quite limited geographical areas of the Red Sea. This work sheds light on how phytoplankton and primary production would react to the effects of global warming in the extreme environment of the Red Sea and, hence, illuminates how similar regions may behave in the context of climate variability. study focuses on using satellite observations to conduct an intercomparison of three net primary production (NPP) models--the vertically generalized production model (VGPM), the Eppley-VGPM, and the carbon-based production model (CbPM)--produced over the Red Sea domain for the 1998-2018 time period. …

Microplastic Prevalence In Four Oregon Rivers Along A Rural To Urban Gradient Applying A Cost-Effective Validation Technique, Amy Valine, Ashley Peterson, Dorothy Horn, Kaegan M. Scully‐Engelmeyer, Elise F. Granek

Environmental Science and Management Faculty Publications and Presentations

Microplastics are ubiquitous in our environment and are found in rivers, streams, oceans, and even tap water. Riverine microplastics are relatively understudied compared to those in marine ecosystems. In Oregon, we sampled eight sites along four freshwater rivers spanning rural to urban areas to quantify microplastics. Plankton tow samples from sites along the Columbia, Willamette, Deschutes, and Rogue Rivers were analyzed using traditional light microscopy for initial microplastic counts. Application of Nile Red dye to validate microplastics improved microplastic identification, particularly for particles (Wilcox Test; p‐value=0.001). Nile Red‐corrected microfiber abundance was correlated with human population within five kilometers of the …

Investigating Dorsal Fin Hydrodynamic Function Of The Lemon Shark, Negaprion Brevirostris, Vivian Lynn Turner

Electronic Theses and Dissertations

Many sharks are considered highly efficient swimmers. Their swimming efficiency is partially governed by their morphological features such as dorsal fins, which play a role in their hydrodynamics. Most sharks feature two dorsal fins that can vary in size and location over the body. The first dorsal fin has been shown to improve stabilization, maneuverability, and increase thrust production during swimming, whilst the hydrodynamic role of the second dorsal fin is largely unknown. An understanding of the hydrodynamic function of the dorsal fins can be utilized in engineering applications, e.g., to replicate fins on underwater autonomous vehicles to increase energy …

Temporal Transport Dynamics Of The Amazon River Plume Revealed Using Radium Isotope Analysis, Elana J. Ames

Electronic Theses and Dissertations

The Amazon River is the largest river by discharge in the world. It carries terrestrial nutrients into the Western Tropical North Atlantic via a buoyant freshwater plume, conveying water hundreds to thousands of kilometers away and driving critical biogeochemical cycles near the coast. Factors controlling the delivery of nutrients offshore by the plume are complicated and interconnected, yet these nutrients impact the foundation of phytoplankton community structures across the entire plume ecosystem. To better understand the temporal dynamics of this massive, highly influential region, we employ naturally occurring radium isotopes (223Ra, 224Ra, 226Ra, and 228Ra) to analyze mixing and transport …

Surviving Under The Reign Of El Niño Southern Oscillation: An Analysis Of The Effects Of Extreme El Niño Events On The Oceanographic And Biological Environment Of The Galápagos Islands, Ava Mcilvaine

Independent Study Project (ISP) Collection

El Niño Southern Oscillation (ENSO) is commonly known as the atmospheric and oceanographic powerhouse of the Southern Pacific Ocean. From phytoplankton to apex predators, ENSO controls the stability of species’ populations within this biodiverse ocean environment. El Niño’s 9-15 month alteration of the heat storage in the tropical Pacific drastically shifts the temperature, nutrient, and circulation gradient its marine life is accustomed to. A single degree change in the ocean’s surface layer temperature can have large consequences for marine species, and El Niño is commonly associated with Sea Surface Temperature Anomalies (SSTAs) between 2°- 6° Celsius. The potential danger El …

Innovative Protection And Conservation Of Coral Reefs In Madagascar, Meghan Parker

Independent Study Project (ISP) Collection

Madagascar is home to approximately 3,450 kilometers of coral reefs, including some of the most biodiverse and valuable marine ecosystems in the Indian Ocean (Webster 2002). This online research project investigates the status of Madagascar’s coral reefs separated by region, threats that are facing the reefs and community-based solutions to protect and conserve the reefs. Conclusions of this online research suggest that most coral reefs in Madagascar are in relatively good health, although looming threats exist from overfishing, increased coastal populations, tourism, and warming waters. Community-based solutions are abundant and have proven effective, and can be implemented nation-wide, personalized to …

Changes In Atmospheric, Meteorological, And Ocean Parameters Associated With The 12 January 2020 Taal Volcanic Eruption, Feng Jing, Akshansa Chauhan, Ramesh P. Singh, Prasanjit Dash

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The Taal volcano erupted on 12 January 2020, the first time since 1977. About 35 mild earthquakes (magnitude greater than 4.0) were observed on 12 January 2020 induced from the eruption. In the present paper, we analyzed optical properties of volcanic aerosols, volcanic gas emission, ocean parameters using multi-satellite sensors, namely, MODIS (Moderate Resolution Imaging Spectroradiometer), AIRS (Atmospheric Infrared Sounder), OMI (Ozone Monitoring Instrument), TROPOMI (TROPOspheric Monitoring Instrument) and ground observations, namely, Argo, and AERONET (AErosol RObotic NETwork) data. Our detailed analysis shows pronounced changes in all the parameters, which mainly occurred in the western and south-western regions because the …

Rockhounding, Seafaring, And Other Material Tales For The End Of The World, Noemie Fortin

The Goose

In the face of accelerated environmental degradation and climate instability, the future of the Earth and of all life on earth is difficult to visualize. Therefore, the different mediums through which we consider environmental issues are just as important as the actions we take to address them. Focusing on three projects combining art, science, and activism, this article suggests a compilation of material tales. They tell stories of plastic rocks and aluminum nuggets where the protagonists are partly finely crafted objects, partly waste materials, and sometimes both at once. Artists Kelly Jazvac, Yesenia Thibeault-Picazo, and the collective Studio Swine collaborate …

Assessment Of Soil Protein And Refractory Soil Organic Matter Across Two Chronosequences Of Newly Developing Marshes In Coastal Louisiana, Usa, Stuart Alexander Mcclellan

LSU Doctoral Dissertations

The impacts of sea-level rise and hydrologic manipulation are threatening the stability of coastal marshes throughout the world, thereby increasing the potential for re-mineralization of soil organic matter (SOM) in these systems. Such threats have prompted marsh restoration efforts, particularly in coastal Louisiana, yet it is unclear how the slowly decomposing (refractory) and quickly decomposing (labile) fractions of SOM may be differentially affected by different approaches to marsh restoration. Additionally, otherwise labile compounds may accumulate in the soil via a range of protective mechanisms, including rapid burial and association with organic compounds that are thought to enhance soil aggregation, such …

Microplastics In Aquatic Organisms: Improving Understanding And Identifying Research Directions For The Next Decade, Elise F. Granek, Susanne Brander, E. B. Holland

Environmental Science and Management Faculty Publications and Presentations

The study of environmental microplastics has increased over the past decade, with hundreds of new studies and resultant papers on the presence, fate, and sources of microplastics in marine and freshwater systems (Fig. 1). Despite the explosion of interest in the topic and in comparison to the research on the presence of microplastics in marine or fresh waters, there have been notably fewer studies on the extent to which these debris items are ingested by aquatic organisms and far fewer on the potential consequences, or response to their presence in organismal guts, tissues, and food webs. Even less research has …

Projecting Regions Of North Atlantic Right Whale, Eubalaena Glacialis, Habitat Suitability In The Gulf Of Maine In 2050, Camille Ross

Honors Theses

North Atlantic right whales (Eubalaena glacialis) are endangered. Understanding the role environmental conditions play in habitat suitability is key to determining the regions in need of protection for conservation of the species, particularly as climate change shifts suitable habitat. This thesis uses three species distribution modeling algorithms, together with historical data on whale abundance(1993 to 2009) and environmental covariates to build monthly ensemble models of past E. glacialis habitat suitability in the Gulf of Maine. Then, the models are projected onto the year 2050 for a range of climate scenarios. Specifically, the distribution of the species was modeled …

Species Distribution Models For Three Deep-Sea Coral And Sponge Taxa In The Southern California Bight, Nissa Kreidler

Cal Poly Humboldt theses and projects

Deep-Sea Coral and Sponge (DSCS) species are signature taxa of deep-water habitats, however understanding the ecological mechanisms that drive their geographic distributions can be difficult to uncover due to the challenges of surveying deep-water ecosystems. A recent study on benthic assemblages in Southern California revealed statistical associations between several DSCS and demersal fishes, many of which are important to management agencies due to commercial or conservation concerns. Maps that predict where these DSCS may occur are needed for the management and protection of these DSCS taxa and the fauna that rely on them for habitat. In this thesis, I develop …