Oceanography Commons^™

The Extraordinary Voyage Of Kamome; A Tsunami Boat Comes Home, Lori Dengler, Amya Miller, Amy Uyeki

Trade & Scholarly Monographs

This sweet story, intended for lower elementary grades, is intended to provide a window for discussing earthquakes, tsunamis, marine debris, preparedness and cultural awareness in the classroom and within families.

On April 7, 2013, a little over two years after the magnitude 9 Tohoku-oki Japan earthquake triggered a massive tsunami off the coast of northeastern Japan, a lone boat washed up on the shores of Crescent City, California. The confirmation of the boat as belonging to a high school in Rikuzentakata was first step in an amazing story that has linked two tsunami-vulnerable communities on opposite sides of the Pacific …

Divergent Responses Of Atlantic Coastal And Oceanic Synechococcus To Iron Limitation, Katherine R. M. Mackey, Anton F. Post, Matthew R. Mcilvin, Gregory A. Cutter, Seth G. John, Mak A. Saito

OES Faculty Publications

Marine Synechococcus are some of the most diverse and ubiquitous phytoplankton, and iron (Fe) is an essential micronutrient that limits productivity in many parts of the ocean. To investigate how coastal and oceanic Atlantic Synechococcus strains acclimate to Fe availability, we compared the growth, photophysiology, and quantitative proteomics of two Synechococcus strains from different Fe regimes. Synechococcus strain WH8102, from a region in the southern Sargasso Sea that receives substantial dust deposition, showed impaired growth and photophysiology as Fe declined, yet used few acclimation responses. Coastal WH8020, from the dynamic, seasonally variable New England shelf, displayed a multitiered, hierarchical cascade …

The Relative Importance Of Methanogenesis In The Decomposition Of Organic Matter In Northern Peatlands, J. Elizabeth Corbett, Malak M. Tfaily, David J. Burdige, Paul H. Glaser, Jeffrey P. Chanton

OES Faculty Publications

Using an isotope-mass balance approach and assuming the equimolar production of CO₂ and CH₄ from methanogenesis (e.g., anaerobic decomposition of cellulose), we calculate that the proportion of total CO₂ production from methanogenesis varies from 37 to 83% across a variety of northern peatlands. In a relative sense, methanogenesis was a more important pathway for decomposition in bogs (80 ± 13% of CO₂ production) than in fens (64 ± 5.7% of CO₂ production), but because fens contain more labile substrates they may support higher CH4 production overall. The concentration of CO₂ produced from methanogenesis (CO …

Iron Supply And Demand In Antarctic Shelf Ecosystem, D. J. Mcgillicuddy Jr., Peter N. Sedwick, Michael S. Dinniman, K. R. Arrigo, T. S. Bibby, B. J. W. Greenan, Eileen E. Hofmann, John M. Klinck, W. O. Smith Jr., S. L. Mack, C. M. Marsay, B. M. Sohst, G. L. Van Dijken

OES Faculty Publications

The Ross Sea sustains a rich ecosystem and is the most productive sector of the Southern Ocean. Most of this production occurs within a polynya during the November-February period, when the availability of dissolved iron (dFe) is thought to exert the major control on phytoplankton growth. Here we combine new data on the distribution of dFe, high-resolution model simulations of ice melt and regional circulation, and satellite-based estimates of primary production to quantify iron supply and demand over the Ross Sea continental shelf. Our analysis suggests that the largest sources of dFe to the euphotic zone are wintertime mixing and …

Heterotrophic And Autotrophic Contribution To Dinitrogen Fixation In The Gulf Of Aqaba, Eyal Rahav, Barak Herut, Margaret R. Mulholland, Natalia Belkin, Hila Elifantz, Ilana Berman-Frank

OES Faculty Publications

We evaluated the seasonal contribution of heterotrophic and autotrophic diazotrophy to the total dinitrogen (N₂) fixation in the photic zone of a pelagic station in the northern Gulf of Aqaba, Red Sea. N₂ fixation rates were highest during a Trichodesmium bloom in winter (0.7 nmol N l^-1 d^-1), decreased 7-fold 1 wk later throughout the upper 200 m (~0.1 nmol N l^-1) d^-1), and were significantly coupled with both primary and bacterial productivity. N₂ fixation rates were generally higher in the upper 200 m (~0.4 nmol N l^{-1 …}

Tropical North Atlantic Subsurface Warming Events As A Fingerprint For Amoc Variability During Marine Isotope Stage 3, Andrew O. Parker, Matthew W. Schmidt, Ping Chang

OES Faculty Publications

The role of Atlantic Meridional Overturning Circulation (AMOC) as the driver of Dansgaard-Oeschger (DO) variability that characterized Marine Isotope Stage 3 (MIS 3) has long been hypothesized. Although there is ample proxy evidence suggesting that DO events were robust features of glacial climate, there is little data supporting a link with AMOC. Recently, modeling studies and subsurface temperature reconstructions have suggested that subsurface warming across the tropical North Atlantic can be used to fingerprint a weakened AMOC during the deglacial because a reduction in the strength of the western boundary current allows warm salinity maximum water of the subtropical gyre …

Dissolved Oxygen Dynamics During A Phytoplankton Bloom In The Ross Sea Polyna, Bastien Y. Queste, Karen J. Heywood, Walker O. Smith Jr., Daniel E. Kaufman, Timothy D. Jickells, Michael S. Dinniman

CCPO Publications

The Ross Sea polynya is one of the most productive regions in the Southern Ocean. However, limited access and high spatio-temporal variability of physical and biological processes limit the use of conventional oceanographic methods to measure early season primary productivity. High-resolution observations from two Seagliders provide insights into the timing of a bloom in the southern Ross Sea polynya in December 2010. Changes in chlorophyll and oxygen concentrations are used to assess bloom dynamics. Using a ratio of dissolved oxygen to carbon, net primary production is estimated over the duration of the bloom showing a sensitive balance between net autotrophy …

Theoretical Foundation Of Cyclostationary Eof Analysis For Geophysical And Climatic Variables: Concepts And Examples, Kwang-Yul Kim, Benjamin Hamlington, Hanna Na

CCPO Publications

Natural variability is an essential component of observations of all geophysical and climate variables. In principal component analysis (PCA), also called empirical orthogonal function (EOF) analysis, a set of orthogonal eigenfunctions is found from a spatial covariance function. These empirical basis functions often lend useful insights into physical processes in the data and serve as a useful tool for developing statistical methods. The underlying assumption in PCA is the stationarity of the data analyzed; that is, the covariance function does not depend on the origin of time. The stationarity assumption is often not justifiable for geophysical and climate variables even …

Spectroscopic Characterization Of Oceanic Dissolved Organic Matter Isolated By Reverse Osmosis Coupled With Electrodialysis, John R. Helms, Jingdong Mao, Hongmei Chen, E. Michael Perdue, Nelson W. Green, Patrick G. Hatcher, Kenneth Mopper, Aron Stubbins

Chemistry & Biochemistry Faculty Publications

Oceanic dissolved organic matter (DOM) is one of the largest pools of reduced carbon on Earth, yet DOM remains poorly chemically characterized. Studies to determine the chemical nature of oceanic DOM have been impeded by the lack of efficient and non-fractioning methods to recover oceanic DOM. Here, a DOM fraction (~40 to 86% recovery) was isolated using reverse osmosis/electrodialysis (RO/ED) and analyzed by solid-state ¹³C nuclear magnetic resonance (NMR) spectroscopy. Samples were obtained from biogeochemically distinct environments: photobleached surface gyre, productive coastal upwelling zone, oxygen minimum, North Atlantic Deep Water, and North Pacific Deep Water. A ubiquitous ‘background’ refractory …

The Simulation & Evaluation Of Surge Hazard Using A Response Surface Method In The New York Bight, Michael H. Bredesen

UNF Graduate Theses and Dissertations

Atmospheric features, such as tropical cyclones, act as a driving mechanism for many of the major hazards affecting coastal areas around the world. Accurate and efficient quantification of tropical cyclone surge hazard is essential to the development of resilient coastal communities, particularly given continued sea level trend concerns. Recent major tropical cyclones that have impacted the northeastern portion of the United States have resulted in devastating flooding in New York City, the most densely populated city in the US. As a part of national effort to re-evaluate coastal inundation hazards, the Federal Emergency Management Agency used the Joint Probability Method …

Aptian To Santonian Foraminiferal Biostratigraphy And Paleoenvironmental Change In The Sverdrup Basin As Revealed At Glacier Fiord, Axel Heiberg Island, Canadian Arctic Archipelago, Claudia J. Schröder-Adams, Jens O. Herrle, Ashton F. Embry, James W. Haggart, Jennifer M. Galloway, Adam T. Pugh, David M. Harwood

ANDRILL Research and Publications

Exceptional exposures of a High Arctic Cretaceous sedimentary record were studied at Glacier Fiord, Axel Heiberg Island. The succession reveals a complex Aptian to Santonian paleoenvironmental history of the Sverdrup Basin that documents several global events. Foraminiferal faunas in combination with rare macrofossil occurrences permit the distinction of nine zones that facilitate biostratigraphic correlations to other High Arctic locales, the Beaufort Mackenzie Basin and the Western Interior Sea. The depositional environment as exposed in the Christopher, Hassel, Bastion Ridge and Kanguk formations changed frequently from a shelf to a shoreface setting. Most sequence boundaries appear to be conformable where shoaling …

Iron Sources And Dissolved-Particulate Interactions In The Seawater Of The Western Equatorial Pacific, Iron Isotope Perspectives, M. Labatut, F. Lacan, C. Pradoux, J. Chmeleff, A. Radic, J. W. Murray, F. Poitrasson, Anne M. Johansen, F. Thil

All Faculty Scholarship for the College of the Sciences

This work presents iron isotope data in the western equatorial Pacific. Marine aerosols and top core margin sediments display a slightly heavy Fe isotopic composition (δ⁵⁶Fe) of 0.33 ± 0.11‰ (2SD) and 0.14 ± 0.07‰, respectively. Samples reflecting the influence of Papua New Guinea runoff (Sepik River and Rabaul volcano water) are characterized by crustal values. In seawater, Fe is mainly supplied in the particulate form and is found with a δ⁵⁶Fe between −0.49 and 0.34 ± 0.07‰. The particulate Fe seems to be brought mainly by runoff and transported across continental shelves and slopes. …

Research On The Application Of Sea Ice Information In The Arctic North West Passage, Yuanhui Yang

Maritime Safety & Environment Management Dissertations (Dalian)

No abstract provided.

Characterization Of Rain And Stormwater Nitrogen Inputs To The Mississippi Sound: A Landscape Approach, Joshua Michael Allen

Master's Theses

Urbanization in coastal watersheds is becoming an increasingly important issue in the world. Increased impervious surface cover, a factor of urbanization, has drawn more attention to stormwater runoff as a source of contamination to receiving waters. In this study, nitrogen species from rain and stormwater were analyzed across three different landscape types along the Mississippi Sound (hardened, residential, and pristine), as well as from drainage pipes that flow directly into to the Mississippi Sound. Nitrogen stable isotopes were used to trace the stormwater nitrogen to the surface waters and biota within the Sound.

The objective of this study was to …

Organic Copper Binding Ligands And Thiol Compounds Produced By Bacteria And In The Elizabeth River, Virginia, Christina Louise Dryden

OES Theses and Dissertations

This dissertation presents work focusing on copper and organic copper binding ligands in laboratory cultures and the Elizabeth River, Virginia. Laboratory cultures of the marine bacterium Vibrio parahaemolyticus were used to demonstrate the influence of elevated copper concentrations on copper-complexing ligand and thiol production. Copper-complexing ligands similar in binding strength to the strongest natural ligands were detected in V. parahaemolyticus cultures (log K′_CuL = 11.8–13.2). A strong correlation (r² = 0.973) was found between total thiol and copper-complexing ligand concentrations at all copper concentrations examined.

A yearlong seasonal study was undertaken in a heavily polluted estuary to ascertain …

A Comprehensive Evaluation Of C25 Highly Branched Isoprenoid Alkenes Of Marine Diatoms As Proxies For Sea Ice Extent In The Arctic Ocean, Tetiana Muniak

OES Theses and Dissertations

Sea Ice extent is one of the major factors regulating carbon cycling and ecosystem function in the modern Arctic Ocean. It is an essential component of climate models and is crucial for the evaluation of various oceanographic processes that influence a particular region. Yet it is also one of the most difficult attributes of the ocean with respect to our ability for its accurate reconstruction from paleo records. The lack of the detailed records prior to satellite information has encouraged the development of new proxy records for the reconstruction of past

sea ice conditions. In recent years, a new monounsaturated …

Implications Of Climate Change For Cyanobacteria Over The Western Florida Shelf In The Gulf Of Mexico, Ivy Mara Ozmon

OES Theses and Dissertations

Concentrations of atmospheric CO₂ are expected to double by year 2100 as a result of anthropogenic activities. Under elevated CO₂ conditions, cyanobacteria may reallocate energy from active accumulation and transport of dissolved inorganic carbon (C) required for photosynthesis to other growth processes. Stimulation of cyanobacterial production on the Western Florida Shelf in the Gulf of Mexico (GOM) could lead to improved nutritional status for the toxic, mixotrophic dinoflagellate Karenia brevis that utilizes newly fixed N₂ from co-occurring diazotrophic cyanobacteria and consumes unicellular cyanobacteria via grazing for growth. Culture studies performed by other researchers on the climate induced …

Exploring The Link Between Otolith Growth And Function Along The Biological Continuum In The Context Of Ocean Acidification, Eric D. Wilcox Freeburg

Graduate Doctoral Dissertations

Oceans are acidifying as atmospheric CO₂ is drawn down. This process, known as ocean acidification (OA), is well known and documented. Over the next 100 years, pH of the surface ocean is projected to decrease by up to 0.35 units. This CO₂ draw down has a direct effect on dissolved inorganic carbon (DIC) balance in the ocean. OA is expected to impact calcifying organisms that rely on constituencies of the DIC system, specifically carbonate ion [CO₃2-]. It is clear that externally calcified structures, such as coral skeletons, bivalve shells, etc., will be significantly affected as pH, …

Quantifying The Impact Of Atmospheric Deposition On The Biogeochemistry Of Fe And Al In The Upper Ocean: A Decade Of Collaboration With The Us Clivar-Co2 Repeat Hydrography Program, Maxime Grand, Clifton Buck, William Landing, Christopher Measures, Mariko Hatta, William Hiscock, Matthew Brown, Joseph Resing

Faculty Publications

The aerosol deposition of continental material and its partial dissolution in the surface ocean exerts an important control on the distribution of iron and other potentially limiting trace metal (TM) micronutrients in the open ocean. This dust deposition has implications for the regulation of global climate through the coupling of biolimiting TM cycles, marine productivity, and the global carbon cycle. Thus, it is important to determine the locations of dust deposition in the open ocean and to quantify the magnitude and subsequent dissolution of the dust. At present, there are too few dust deposition estimates and solubility measurements in the …

Kenyan Climate Variation Assessment Through Rainfall Anomalies And Sea Surface Temperature (Sst) Correlations, Kimberly E. Lykens

STAR Program Research Presentations

The diverse and varied climate of Eastern Africa’s Kenya is home to an agriculturally dependent populace, in which farmers and other related economic sectors make up the majority of livelihoods and gross domestic product. Recurring droughts and severe flooding are major concerns for local farmers and governmental entities. The purpose of this study is to identify and categorize differences in rainfall trends over Kenya and to examine relationships between seasonal rainfall anomalies of sea surface temperature (SST), with an ultimate goal to improve predictions of wet season rainfall amounts. The analysis began with data from 27 national and cooperative weather …

Weekly Gridded Aquarius L-Band Radiometer/Scatterometer Observations And Salinity Retrievals Over The Polar Regions - Part 1: Product Description, L. Brucker, Emmanuel P. Dinnat, L. S. Koenig

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Passive and active observations at L band (frequency similar to 1.4 GHz) from the Aquarius/SAC-D mission offer new capabilities to study the polar regions. Due to the lack of polar-gridded products, however, applications over the cryosphere have been limited. We present three weekly polar-gridded products of Aquarius data to improve our understanding of L-band observations of ice sheets, sea ice, permafrost, and the polar oceans. Additionally, these products intend to facilitate access to L-band data, and can be used to assist in algorithm developments. Aquarius data at latitudes higher than 50 degrees are averaged and gridded into weekly products of …

Weekly Gridded Aquarius L-Band Radiometer/Scatterometer Observations And Salinity Retrievals Over The Polar Regions - Part 2: Initial Product Analysis, L. Brucker, Emmanuel P. Dinnat, L. S. Koenig

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Following the development and availability of Aquarius weekly polar-gridded products, this study presents the spatial and temporal radiometer and scatterometer observations at L band (frequency similar to 1.4 GHz) over the cryosphere including the Greenland and Antarctic ice sheets, sea ice in both hemispheres, and over sub-Arctic land for monitoring the soil freeze/thaw state. We provide multiple examples of scientific applications for the L-band data over the cryosphere. For example, we show that over the Greenland Ice Sheet, the unusual 2012 melt event lead to an L-band brightness temperature (TB) sustained decrease of similar to 5K at horizontal polarization. Over …

Molecular Characterization And Photochemical Transformation Of Dissolved Organic Matter From Land To Ocean, Hongmei Chen

Chemistry & Biochemistry Theses & Dissertations

Molecular characterization and photochemical transformation of dissolved organic matter (DOM) in both rivers and the ocean is the main research focus of this dissertation. Chemical characterization of DOM is hampered by the limited application of advanced techniques to desalt, concentrate, isolate and then molecularly characterize DOM. An affordable, commercially available mini-electrodialysis (mini-ED) system has been evaluated and recommended for the efficient desalting of small volume samples of seawater prior to analysis by electrospray Fourier transform ion cyclotron resonance mass spectrometry (ESI FTICR-MS).

A high-recovery technique of DOM isolation – reverse osmosis coupled with electrodialysis (RO/ED) – was used to isolate …

Phytoplankton And Nutrient Dynamics In A Tidally Dominated Eutrophic Estuary: Daily Variability And Controls On Bloom Formation, Ryan E. Morse, Margaret R. Mulholland, Todd A. Egerton, Harold G. Marshall

OES Faculty Publications

To better understand nutrient dynamics and factors that promote the initiation of algal blooms, the Lafayette River, a tidal subestuary of Chesapeake Bay that experiences seasonal algal blooms, was sampled daily for a period of 54 d in the fall of 2005. Three phytoplankton blooms (chl a concentrations exceeding twice the average of monthly measurements from 2000 to 2009) occurred during this period: a mixed bloom of Akashiwo sanguinea and Gymnodinium sp., a monospecific Skeletonema costatum bloom, and a monospecific Gymnodinium sp. bloom. Over the sampling period, nutrient concentrations increased following precipitation events and were elevated between bloom periods but …

The Great 2012 Arctic Ocean Summer Cyclone Enhanced Biological Productivity On The Shelves, Jinlun Zhang, Carin Ashjian, Robert Campbell, Victoria Hill, Yvette H. Spitz, Michael Steele

OES Faculty Publications

A coupled biophysical model is used to examine the impact of the great Arctic cyclone of early August 2012 on the marine planktonic ecosystem in the Pacific sector of the Arctic Ocean (PSA). Model results indicate that the cyclone influences the marine planktonic ecosystem by enhancing productivity on the shelves of the Chukchi, East Siberian, and Laptev seas during the storm. Although the cyclone's passage in the PSA lasted only a few days, the simulated biological effects on the shelves last 1 month or longer. At some locations on the shelves, primary productivity (PP) increases by up to 90% and …

The Impact Of Changing Surface Ocean Conditions On The Dissolution Of Aerosol Iron, Matthew P. Fishwick, Peter N. Sedwick, Maeve C. Lohan, Paul J. Worsfold, Kristen N. Buck, Thomas M. Church, Simon J. Ussher

OES Faculty Publications

The proportion of aerosol iron (Fe) that dissolves in seawater varies greatly and is dependent on aerosol composition and the physicochemical conditions of seawater, which may change depending on location or be altered by global environmental change. Aerosol and surface seawater samples were collected in the Sargasso Sea and used to investigate the impact of these changing conditions on aerosol Fe dissolution in seawater. Our data show that seawater temperature, pH, and oxygen concentration, within the range of current and projected future values, had no significant effect on the dissolution of aerosol Fe. However, the source and composition of aerosols …

Did A Submarine Landslide Contribute To The 2011 Tohoku Tsunami?, David R. Tappin, Stephan T. Grilli, Jeffrey C. Harris, Robert J. Geller, Timothy Masterlark, James T. Kirby, Fengyan Shi, Gangfeng Ma, K.K.S. Thingbaijam, P. Martin Mai

Civil & Environmental Engineering Faculty Publications

Many studies have modeled the Tohoku tsunami of March 11, 2011 as being due entirely to slip on an earthquake fault, but the following discrepancies suggest that further research is warranted. (1) Published models of tsunami propagation and coastal impact underpredict the observed runup heights of up to 40. m measured along the coast of the Sanriku district in the northeast part of Honshu Island. (2) Published models cannot reproduce the timing and high-frequency content of tsunami waves recorded at three nearshore buoys off Sanriku, nor the timing and dispersion properties of the waveforms at offshore DART buoy #21418. (3) …

Marine Diatom Assemblage Variation Across Pleistocene Glacial–Interglacial Transitions And Neogene Diatom Biostratigraphy Of Site C9001, Nw Pacific Ocean, Marcella K. Purkey

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

In 2006, D/V-Chikyu cruise CK06-06 drilled Hole C9001C at Site C9001 in the Northwest Pacific Ocean, 80 km east of the Shimokita Peninsula, Japan. An existing chronostratigraphic framework provides a continuous glacial-interglacial (GI) climate record from which a diatom record of paleoenvironmental changes was developed across several GI cycles. Species counts, diatom temperature values, calculated sea-surface temperatures (SST) and factor analysis were produced for each sample and calibrated to prior diatom studies in this region. These features were used to characterize and compare interglacial maxima of Marine Isotope Stages (MIS) 1, 5e, 9 and 11 and transitions from the preceding …

Phosphorus Cycling In Tropical Carbonate Sediment-Seagrass Systems, Zachary Howerton

OES Theses and Dissertations

This thesis presents two studies focusing on phosphorus cycling in calcium carbonate sediments inhabited by seagrasses. Phosphorus is a major limiting nutrient for primary productivity in these sediments as well as in the overlying waters. In large part this is due to removal of phosphate from solution by adsorption and precipitation reactions.

In chapter II, the relationship between the size of the sedimentary phosphorus pool and the abundance of seagrass on the Great Bahama Bank, as well as the relationship between phosphorus content and grain size in the sediments, were examined to better understand the biogeochemistry of carbonate sediments and …

Scavenging, Cycling And Removal Fluxes Of 210Po And 210Pb At The Bermuda Time-Series Study Site, G. H. Hong, M. Baskaran, T. M. Church, M. Conte

Environmental Science and Geology Faculty Research Publications

Quantifying relative affinities of Po and Pb in different populations of marine particulate matter is of great importance in utilizing ²¹⁰Po as a tracer for carbon cycling. We collected and analyzed water samples for the concentrations of dissolved and total ²¹⁰Po and ²¹⁰Pb from the upper 600 m of the water column at Bermuda Time-series Study site (September 1999 to September 2000) to investigate their seasonality of concentrations and their ac-tivity ratio (²¹⁰Po/²¹⁰Pb activity ratio, AR). Sinking particles collected in sediment traps at depths of 500 m, 1500 m, and 3200 m from …