Oceanography and Atmospheric Sciences and Meteorology Commons^™

Investigation Of Bottom Fishing Impacts On Benthic Structure Using Multibeam Sonar, Sidescan And Video, Mashkoor A. Malik, Larry A. Mayer

Center for Coastal and Ocean Mapping

Bottom fishing gear is known to alter benthic structure, however changes in the shape of the sea floor are often too subtle to be detected by acoustic remote sensing. Nonetheless, long linear features were observed during a recent high-resolution multibeam sonar survey of Jeffreys Ledge, a prominent fishing ground in Gulf of Maine, located about 50 km from Portsmouth, NH. These marks, which have a relief of only few centimeters, are presumed to be caused by bottom dredging gear used in the area for scallop and clam fisheries. The extraction of these small features from a noisy data set (including …

Multi-Dimensional, Multi-National, Multi-Faceted Hydrographic Training: The Nippon Foundation Gebco Training Program At The University Of New Hampshire, Dave Monahan, Clive Angwenyi, Hugo Montoro, Taisei Morishita, Abubakar Mustapha, Walter Reynoso Peralta, Shereen Sharma, Srinivas Karlapati

Center for Coastal and Ocean Mapping

Hydrographic training entered a new era when students arrived at the University of New Hampshire in August of 2004 to form the first class of the Nippon Foundation GEBCO (General Bathymetric Chart of the Oceans) training program. Born out of the need to replenish GEBCO’s aging human material, and of the desire to spread deep ocean mapping capabilities more widely throughout the world, the program attracted applications from 57 students in over thirty countries. The seven selected each had post graduate training and several years experience, but differed in that three were hydrographers, two geologists and two oceanographers. Classes planned …

Panoramic Images For Situational Awareness In A 3d Chart-Of-The-Future Display, Matthew D. Plumlee, Colin Ware, Roland J. Arsenault, Rick Brennan

Center for Coastal and Ocean Mapping

Many early charts featured sketches of the coastline, providing a good picture of what the shore looked like from the bridge of a ship. These helped the mariner to distinguish one port from another during an approach and establish their rough position within that approach. More recent experimental 3D chart interfaces have incorporated 3D models of land topography and man-made structures to perform the same function. However, topography is typically captured from the air, by means of stereophotogrammetry or lidar and fails to present a good representation of what is seen from a vessel’s bridge. We have been conducting an …

Crop Updates 2005 - Lupins And Pulses, Peter White, Martin Harries, Ian Pritchard, Rodger Beermier, Mark Seymor, David Syme, Bevan Buirchell, Kedar Adhikari, Mark Sweetingham, Geoff Thomas, Jon Clements, Shao Fang Wang, Ping Si, David Bowran, Huaan Yang, Mike Baker, Wayne Parker, Bob French, Damien Owen D'Arcy, Bill Bowden, Craig Scanlan, Jeff Russell, Angie Roe, Greg Shea, Chris Matthews, Shahab Pathan, Abul Hashem, Sofia Sipsas, John Quealy, Roger Jones, Clive Francis, Colin Smith, Gordon Francis, Tanveer Khan, Kerry Regan, Jenny Garlinge, Rod Hunter, Greg Mussell, Glen Riethmuller, Moin Salam, Jean Galloway, Larn Mcmurray, Kambot Siddique, Dirranie Kirby, Murray Blyth, Fucheng Shan, Heather Clarke, Madeleine Wouterlood, Hans Lambers, Erik Veneklaas, Peter Smith, Gae Plunkett, Tim Pope, Janine Croser, Julia Wilson, Leanne Young, Michael Materne, Colin Hanbury, Dennis Van Gool, Noel Schoknecht, Richard Bell, Wendy Vance, Kedar Adhikari, Mohammad Nuruzzaman, Erik Veneklaas, Mike Bolland, Stuart Pearse, Geoff Thomas, Ken Adcock, Bill Mcleod, Pip Payne, Alan Harrod, Glenda Smith, Rohan Prince

Crop Updates

This session covers sixty five papers from different authors:

1. 2004 LUPIN AND PULSE INDUSTRY HIGHLIGHTS, Peter White Department of Agriculture

2. BACKGROUND, Peter White Department of Agriculture

2004 REGIONAL ROUNDUP

3. Northern Agricultural Region, Martin Harries, Department of Agriculture

4. Central Agricultural Region, Ian Pritchard, Department of Agriculture

5. Great Southern and Lakes, Rodger Beermier, Department of Agriculture

6. Esperance Port Zone, Mark Seymour, Department of Agriculture, and David Syme, The Grain Pool of WA

LUPIN AND PULSE PRODUCTION AGRONOMY AND GENETIC IMPROVEMENT

7. Lupin, Martin Harries, Department of Agriculture …

Crop Updates 2005 - Farming Systems, David Stephens, Nicola Telcik, Ross Kingwell, Wayne Pluske, Bill Bowden, Mike Collins, Frances Hoyle, D. V. Murphy, N. Milton, M. Osman, L. K. Abbott, W. R. Cookson, S. Darmawanto, Bill Crabtree, Geoff Anderson, Darren Kidson, Ross Brennan, Nick Drew, Craig Scanlan, Lisa Sherriff, Bob French, Reg Lunt, Jeff Russell, Angie Roe, Ian Maling, Matthew Adams, George Yan, Mohammad Hamza, Glen Riethmuller, Wal Anderson, Angela Loi, Phil Nichols, Clinton Revell, David Ferris, Phil Ward, Andrea Hills, Sally-Anne Penny, David Hall, Michael Robertson, Don Gaydon, Tress Walmsley, Caroline Peek, Megan Abrahams, Paul Raper, Richard O'Donnell, Trevor Lacey, Meredith Fairbanks, David Tennant, Cameron Weeks, Richard Quinlan, Alexandra Edward, Chris Carter, Doug Hamilton, Peter Tozer, Renaye Horne, Tracey Gianatti, Paul Carmody, Ian Foster, Michele John, Ross George, Imma Farré, Ian Kininmonth, Dennis Van Gool, Neil Coles, Bill Porter, Louise Barton, Richard Harper, Peter Ritson, Tony Beck, Chris Mitchell, Michael Hill, Fiona Barker-Reid, Will Gates, Ken Wilson, Rob Baigent, Ian Galbally, Mick Meyer, Ian Weeks, Traci Griffin, D. Rodriguez, M. Probust, M. Meyers, D. Chen, A. Bennett, W. Strong, R. Nussey, I Galbally, M. Howden

Crop Updates

This session covers forty four papers from different authors:

PLENARY

1. 2005 Outlook, David Stephens and Nicola Telcik, Department of Agriculture

FERTILITY AND NUTRITION

2. The effect of higher nitrogen fertiliser prices on rotation and fertiliser strategies in cropping systems, Ross Kingwell, Department of Agriculture and University of Western Australia

3. Stubble management: The short and long term implications for crop nutrition and soil fertility, Wayne Pluske, Nutrient Management Systems and Bill Bowden, Department of Agriculture

4. Stubble management: The pros and cons of different methods, Bill Bowden, Department of Agriculture, Western Australia and Mike Collins, …

U.S. Law Of The Sea Cruise To Map The Foot Of The Slope And 2500-M Isobath Of The U.S. Arctic Ocean Margin. Cruise Report For 2004, Larry A. Mayer

Center for Coastal and Ocean Mapping

U.S. Law of the Sea cruise to map the foot of the slope and 2500-m isobath of the US Arctic Ocean margin

CRUISES HE-0405

October 6 to October 26, 2004

Nome, AK to Barrow, AK

Ecological Analysis Of Nutrient, Plankton And Benthic Communities In Farmington Bay And The Great Salt Lake, Utah (2004), Amy M. Marcarelli, Wayne A. Wurtsbaugh

Watershed Sciences Faculty Publications

In Fall 2004, the Aquatic Ecology Practicum class at Utah State University finished a third year of research on limnological and ecological characteristics of Farmington Bay and Gilbert Bays of the Great Salt Lake. Our previous research has produced interesting findings in Farmington Bay, including hypereutrophy (Marcarelli et a!. 2001), high phosphorus loading into the Bay, overnight water column anoxia linked to high winds (Wurtsbaugh et a!. 2002), potential predator control of brine shrimp, and high levels of hydrogen sulfide in the sediment and deep brine layer (Marcarelli et a!. 2003). These class findings have lead to increased interest in …

Characteristics Of Instabilities In The Mesopause Region Over Maui, Hawaii, Feng Li, Alan Z. Liu, Gary R. Swenson

Physical Sciences - Daytona Beach

Characteristics of convective and dynamical instabilities in the mesopause region (between 85 and 100 km) over Maui, Hawaii (20.7ºN, 156.3ºW) are investigated using 19 nights, ~133 hours of high-resolution wind and temperature data obtained by the University of Illinois Na wind/temperature lidar during the Maui Mesosphere and Lower Thermosphere (Maui MALT) campaigns. The mean probabilities of convective and dynamical instabilities are observed to be ~3 and 10%, respectively, but there is considerable night-to-night variation. At any given time the probability that an unstable condition is found at some altitudes in the 85–100 km range is 90%. The Maui MALT data …

Potential Economic Impacts Of Zebra Mussels On The Hydropower Facilities In The Columbia River Basin, Stephen Phillips, Tim Darland, Mark Sytsma

Center for Lakes and Reservoirs Publications and Presentations

The purpose of this study was to estimate costs to the Federal Columbia River Power System hydroelectric projects in the event of a zebra mussel infestation.

Vertical Heat And Constituent Transport In The Mesopause Region By Dissipating Gravity Waves At Maui, Hawaii (20.7ºn), And Starfire Optical Range, New Mexico (35ºn), Alan Z. Liu, Chester S. Gardner

Physical Sciences - Daytona Beach

Vertical heat flux profiles induced by dissipating gravity waves in the mesopause region (85–100 km altitude) are derived from Na lidar measurements of winds and temperatures at Maui (20.7ºN, 156.3ºW), Hawaii, and compared with earlier results from Starfire Optical Range (SOR, 35.0ºN, 106.5ºW), New Mexico. The heat flux profile at SOR has a single downward maximum of 2.25 ± 0.3 K m/s at 88 km, while the profile at Maui has two downward maxima of 1.25 ± 0.5 K m/s and 1.40 ± 0.5 K m/s at 87 and 95 km, respectively. The common maximum below 90 km can be …

A Full-Wave Investigation Of The Use Of A ‘‘Cancellation Factor’’ In Gravity Wave–Oh Airglow Interaction Studies, Michael P. Hickey Ph.D., Yonghui Yu

Publications

Atmospheric gravity waves (GWs) perturb minor species involved in the chemical reactions of airglow emissions in the upper mesosphere and lower thermosphere. In order to determine gravity wave fluxes and the forcing effects of gravity waves on the mean state (which are proportional to the square of the wave amplitude), it is essential that the amplitude of airglow brightness fluctuation be related to the amplitude of major gas density fluctuation in a deterministic way. This has been achieved through detailed modeling combining gravity wave dynamics described using a full-wave model with the chemistry relevant to the airglow emission of interest. …

The William S. Richardson Library, Nova Southeastern University

Halmos College of Natural Sciences and Oceanography Course Catalogs

No abstract provided.

The National Coral Reef Institute, Nova Southeastern University

Halmos College of Natural Sciences and Oceanography Course Catalogs

No abstract provided.

Landscape Patterns Of Streams & Lakes In Montane Watersheds Determine Water Temperatures & Nutrient Transport: Watershed Analyses And N Tracer Experiments, Wayne A. Wurtsbaugh, J. Garrett, G. Burkart, W. Fleenor, K. Nydick, R. Hall, Michelle A. Baker

Watershed Sciences Faculty Publications

In glaciated mountains, lakes are interspersed through watersheds and connected by streams. Although lakes or streams are frequently studied as individual water bodies, studying them as integrated functional units provides considerable insight on temperature patterns, nutrient transport and other functions. In the Sawtooth Mountains (Idaho), inter-lake distance averages 2.8 km. In summer, lakes are solar collectors, and warm outflow streams as much as 10 C, thus increasing metabolic rates. These streams seldom cool to equilibrium temperatures before encountering another lake, where the waters tend to overflow and mix into the epilimnion. With overflow, N-15 tracer experiments demonstrated that water and …

An Analysis Of Nitrate Contaminated Water In Cherry Valley, Adriana Hernandez-Romo

Theses Digitization Project

The purpose of this study was to evaluate the level of nitrate contamination in the water in Cherry Valley. It examines the theory that human effluent is the source of the nitrate and evaluates the role of politics in the nitrate issue.

On The Optimization Of Visualizations Of Complex Phenomena, Donald H. House, Althea D. Bair, Colin Ware

Center for Coastal and Ocean Mapping

The problem of perceptually optimizing complex visualizations is a difficult one, involving perceptual as well as aesthetic issues. In our experience, controlled experiments are quite limited in their ability to uncover interrelationships among visualization parameters, and thus may not be the most useful way to develop rules-of-thumb or theory to guide the production of high-quality visualizations. In this paper, we propose a new experimental approach to optimizing visualization quality that integrates some of the strong points of controlled experiments with methods more suited to investigating complex highly-coupled phenomena. We use human-in-the-loop experiments to search through visualization parameter space, generating large …

Mapping Near-Surface Gas With Acoustic Remote Sensing Methods, Examples From Eel River Margin, Ca And Skjalfandi Bay, Iceland, Luciano E. Fonseca, Larry A. Mayer

Center for Coastal and Ocean Mapping

No abstract provided.

Auditory Brainstem Responses In The Eastern Screech Owl: An Estimate Of Auditory Thresholds, Elizabeth F. Brittan-Powell, Bernard Lohr, Dana L. Hahn, Robert J. Dooling

United States Geological Survey: Staff Publications

The auditory brainstem response (ABR), a measure of neural synchrony, was used to estimate auditory sensitivity in the eastern screech owl (Megascops asio). The typical screech owl ABR waveform showed two to three prominent peaks occurring within 5 ms of stimulus onset. As sound pressure levels increased, the ABR peak amplitude increased and latency decreased. With an increasing stimulus presentation rate, ABR peak amplitude decreased and latency increased. Generally, changes in the ABR waveform to stimulus intensity and repetition rate are consistent with the pattern found in several avian families. The ABR audiogram shows that screech owls hear best between …

Multiple-Year Droughts In Nebraska, Michael J. Hayes, Cody L. Knutson, Q. Steven Hu

National Drought Mitigation Center: Faculty Publications

Most people understand that droughts have had a major impact on Nebraska in the past. Yet, many Nebraskans continue to be surprised when drought occurs. It is important to remember that droughts, including multiple-year droughts, are a normal part of Nebraska’s climate. This NebGuide discusses the history of drought in Nebraska, and aims to help Nebraskans better understand the range of climatic variability when they plan for drought.

Drought Preparedness Planning: Building Institutional Capacity, Donald A. Wilhite, Michael Hayes, Cody L. Knutson

National Drought Mitigation Center: Faculty Publications

Past attempts to manage drought and its impacts through a reactive, crisis management approach have been ineffective, poorly coordinated, and untimely, as illustrated by the hydro- illogical cycle in Figure 1. The crisis management approach has been followed in both developed and developing countries. Because of the ineffectiveness of this approach, greater interest has evolved in recent years in the adoption of a more proactive risk-based management approach in some countries (see Chapter 6). Other countries are striving to obtain a higher level of preparedness through development of national action programs that are part of the United Nations Convention to …

A New Approach For Predicting Drought-Related Vegetation Stress: Integrating Satellite, Climate, And Biophysical Data Over The U.S. Central Plains, Tsegaue Tadesse, Jesslyn F. Brown, Michael Hayes

National Drought Mitigation Center: Faculty Publications

Droughts are normal climate episodes, yet they are among the most expensive natural disasters in the world. Knowledge about the timing, severity, and pattern of droughts on the landscape can be incorporated into effective planning and decisionmaking. In this study, we present a data mining approach to modeling vegetation stress due to drought and mapping its spatial extent during the growing season. Rule-based regression tree models were generated that identify relationships between satellite-derived vegetation conditions, climatic drought indices, and biophysical data, including land-cover type, available soil water capacity, percent of irrigated farm land, and ecological type. The data mining method …

Fish Colonization Of A Newly Deployed Vessel-Reef Off Southeast Florida: Preliminary Results, Paul T. Arena, Lance K. B. Jordan, Patrick Quinn, Arlo H. Hemphill, David R. Bryan, Brian Buskirk, Richard E. Spieler

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Fish colonization on the Ebenezer II, a 25.5m merchant marine vessel, was studied from May 2002 - July 2003. The ship was scuttled in May 2002 off Broward County, Florida at a depth of 21m and was censused 10 times during the study period using a modified Bohnsack and Bannerot visual census method. Adjacent natural reefs and the Mcallister, a nearby, 30m tugboat deployed in June 1998, were censused during the same period.

Distinct changes in the fish assemblage on the Ebenezer II were observed throughout the sample period. A pioneer assemblage was observed during the first three months, characterized …

The Composition Of Coexisting Jarosite-Group Minerals And Water From The Richmond Mine, Iron Mountain, California, Heather E. Jamieson, Clare Robinson, Charles N. Alpers, D. Kirk Nordstrom, Alexei Poustovetov, Heather A. Lowers

United States Geological Survey: Staff Publications

Jarosite-group minerals accumulate in the form of stalactites and fine-grained mud on massive pyrite in the D drift of the Richmond mine, Iron Mountain, California. Water samples were collected by placing beakers under the dripping stalactites and by extracting pore water from the mud using a centrifuge. The water is rich in Fe³⁺ and SO₄^2–, with a pH of approximately 2.1, which is significantly higher than the extremely acidic waters found elsewhere in the mine. Electron-microprobe analysis and X-ray mapping indicate that the small crystals (<10 > μm in diameter) are compositionally zoned with respect to Na …

Taxonomic Relationships Among Phenacomys Voles As Inferred By Cytochrome B, M. Renee Bellinger, Susan M. Haig, Eric D. Forsman, Thomas D. Mullins

United States Geological Survey: Staff Publications

Taxonomic relationships among red tree voles (Phenacomys longicaudus longicaudus, P. l. silvicola), the Sonoma tree vole (P. pomo), the white-footed vole (P. albipes), and the heather vole (P. intermedius) were examined using 664 base pairs of the mitochondrial cytochrome b gene. Results indicate specific differences among red tree voles, Sonoma tree voles, white-footed voles, and heather voles, but no clear difference between the 2 Oregon subspecies of red tree voles (P. l. longicaudus and P. l. silvicola). Our data further indicated a close relationship between tree voles and albipes, …

Comparison Of Individual And Pooled Sampling Methods For Detecting Bacterial Pathogens Of Fish, Sonia Mumford, Chris Patterson, Joy Evered, Ray Brunson, Jay Levine, Jim Winton

United States Geological Survey: Staff Publications

Examination of finfish populations for viral and bacterial pathogens is an important component of fish disease control programs worldwide. Two methods are commonly used for collecting tissue samples for bacteriological culture, the currently accepted standards for detection of bacterial fish pathogens. The method specified in the Office International des Epizooties Manual of Diagnostic Tests for Aquatic Animals permits combining renal and splenic tissues from as many as 5 fish into pooled samples. The American Fisheries Society (AFS) Blue Book/US Fish and Wildlife Service (USFWS) Inspection Manual specifies the use of a bacteriological loop for collecting samples from the kidney of …

Discovering Associations Between Climatic And Oceanic Parameters To Monitor Drought In Nebraska Using Data-Mining Techniques, Tsegaye Tadesse, Donald A. Wilhite, Michael J. Hayes, Steve Goddard

National Drought Mitigation Center: Faculty Publications

Drought is a complex natural hazard that is best characterized by multiple climatological and hydrological parameters. Improving our understanding of the relationships between these parameters is necessary to reduce the impacts of drought. Data mining is a recently developed technique that can be used to interact with large databases and assist in the discovery of associations between drought and oceanic data by extracting information from massive and multiple data archives. In this study, a new data-mining algorithm [i.e., Minimal Occurrences With Constraints and Time Lags (MOWCATL)] has been used to identify the relationships between oceanic parameters and drought indices. Rather …

Winter 2005, Nsu Oceanographic Center

Currents

No abstract provided.

The State Of Coral Reef Ecosystems Of Florida, Katherine Andrews (Ed.), Larry Nall (Ed.), Chris Jeffrey (Ed.), Simon Pittman (Ed.), Kenneth Banks, Carl Beaver, James A. Bohnsack, Richard E. Dodge, David S. Gilliam, Walter Jaap, Brian Keller, V. R. Leeworthy, Tom Matthews, Ramon Ruiz-Carus, Deborah Santavy, Richard E. Spieler, Jerald Ault, Gabriel Delgado, Fleur M. Ferro, Carol R. Fretwell, Bill Goodwin, Doug Harper, John Hunt, Margaret Miller, Christy Pattengil-Semmens, Bill Sharp, Steve Smith, Jennifer Wheaton, Dana Williams

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Sea Turtle Conservation Program, Broward County, Fl 2005 Report, Curtis M. Burney, Stefanie Ouellette

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Highly Streamlined Pcr-Based Genetic Identification Of Carcharhinid Sharks (Family Carcharhinidae) For Use In Wildlife Forensics, Trade Monitoring, And Delineation Of Species Distributions, Marcy Henning

HCNSO Student Theses and Dissertations

An increase in worldwide industrialized shark fisheries resulting from the growing demand for shark products, especially shark fins in Asian markets, as well as high levels of bycatch mortality associated with multi-species fisheries have raised suspicions of substantial declines in global shark populations. Due to varying responses by individual species to fishing pressure, it has become necessary to manage sharks on a species-specific basis, which requires the collection of more accurate catch and trade data. The accumulation of such data is hindered, however, by difficulties in identifying species from only landed carcasses, body parts, or fins. This is especially true …