Oceanography and Atmospheric Sciences and Meteorology Commons^™

Social-Ecological Dynamics Of Coral Reef Resource Use And Management, Sarah J. Freed

Dissertations and Theses

This dissertation investigates social and ecological factors that facilitate effective management of coral reefs as social-ecological systems. Meta-analytical and field-based methods were employed to examine current management challenges and identify strategies that improve management effectiveness and coral reef health. A meta-analysis was used to evaluate biological indicators of reef health in relation to the types of fishing regulations in place (no-take areas, gear restriction areas, and periodic closures) and the actor groups (community-based, co-management, state, private) involved in management efforts for coral reef fisheries throughout the world. Other than enhancement of fish biomass within no-take areas that was significantly greater …

Interspecific Variation In Leaf-Level Biogenic Emissions Of The Bambuseae, Andrea Natalie Melnychenko

Dissertations and Theses

Plants emit a diverse range of biogenic volatile organic compounds (BVOCs) into the atmosphere, of which isoprene is the most abundantly emitted. Isoprene significantly affects biological and atmospheric processes, but the range of isoprene and BVOCs present in bamboos has not been well characterized. In this thesis I explore the range of isoprene emission found in bamboos and relate it to plant morphological and physiological characteristics. In addition, I measure and relate the entire suite of BVOCs present in the bamboos to their fundamental isoprene emission rate.

Interspecific variation in isoprene emission documented in a comprehensive survey of bamboos. Two …

Air-Quality And Climatic Consequences Of Bioenergy Crop Cultivation, William Christian Porter

Dissertations and Theses

Bioenergy is expected to play an increasingly significant role in the global energy budget. In addition to the use of liquid energy forms such as ethanol and biodiesel, electricity generation using processed energy crops as a partial or full coal alternative is expected to increase, requiring large-scale conversions of land for the cultivation of bioenergy feedstocks such as cane, grasses, or short rotation coppice. With land-use change identified as a major contributor to changes in the emission of biogenic volatile organic compounds (BVOCs), many of which are known contributors to the pollutants ozone (O₃) and fine particulate matter …

Glacier Change In The North Cascades, Washington: 1900-2009, Kristina Amanda Dick

Dissertations and Theses

Glaciers respond to local climate changes making them important indicators of regional climate change. The North Cascades region of Washington is the most glaciated region in the lower-48 states with approximately 25% of all glaciers and 40% of the total ice-covered area. While there are many on-going investigations of specific glaciers, little research has addressed the entire glacier cover of the region. A reference inventory of glaciers was derived from a comparison of two different inventories dating to about 1958. The different inventories agree within 93% of total number of glaciers and 94% of total ice-covered area. To quantify glacier …

Climate Change Impact On The Spatio-Temporal Variability Of Hydro-Climate Extremes, Mohammad Reza Najafi

Dissertations and Theses

The rising temperature of the earth due to climate change has shown to alter the variations of hydro-climate variables, including their intensities, frequencies and durations. Extreme events such as floods are, in particular, susceptible to any disturbances in climate cycles. As such it is important to provide policymakers with sufficient knowledge about the probable impacts of climate change on hydrologic extremes and most importantly on floods, which have the highest impacts on the societies. For this reason analysis of hydro-climate extremes is commonly performed using data at each site (or grid cell), however due to the limited number of extreme …

Climate Change Impacts On Precipitation Extremes Over The Columbia River Basin Based On Downscaled Cmip5 Climate Scenarios, Ghulam Hussain Dars

Dissertations and Theses

Hydro-climate extreme analysis helps understanding the process of spatio-temporal variation of extreme events due to climate change, and it is an important aspect in designing hydrological structures, forecasting floods and an effective decision making in the field of water resources design and management. The study evaluates extreme precipitation events over the Columbia River Basin (CRB), the fourth largest basin in the U.S., by simulating four CMIP5 global climate models (GCMs) for the historical period (1970-1999) and future period (2041-2070) under RCP85 GHG scenario.

We estimated the intensity of extreme and average precipitation for both winter (DJF) and summer (JJA) seasons …

Effects Of Hru Size On Prms Performance In 30 Western U.S. Basins, Madeline Olena Steele

Dissertations and Theses

Semi-distributed hydrological models are often used for streamflow forecasting, hydrological climate change impact assessments, and other applications. In such models, basins are broken up into hydrologic response units (HRUs), which are assumed to have a relatively homogenous response to precipitation. HRUs are delineated in a variety of ways, and the procedure used may impact model performance. HRU delineation procedures have been researched, but it is still not clear how important these subdivision schemes are or which delineation methods are most effective. To start addressing this knowledge gap, this project investigated whether or not HRU size has a significant effect on …

The Production Of Organic Nitrates In Portland Oregon And The Columbia River Gorge, Holly Ann Neill

Dissertations and Theses

This work studied the production of aerosol-phase organic nitrates in both Portland and the Columbia River Gorge (CRG). Ozone and NO_x species were investigated for correlation with organic nitrate aerosol, as they function as precursors to the production of organic nitrates. These ambient gas-phase measurements were collected in the same locations as high-volume (Hi-Vol) filters samples, in an urban and rural gorge setting to investigate correlations at the origin of the pollution plume and downwind. A novel Soxhlet extraction method for Hi-Vol filters was developed based on literature and EPA standard methods. Analysis for nitrate production was done by …

Aquatic Invasive Plant Surveys In The Blm Medford District During 2012, Rich Miller, Vanessa Morgan, Mark D. Sytsma

Center for Lakes and Reservoirs Publications and Presentations

Aquatic plant surveys were conducted at 22 waterbodies located within the Bureau of Land Management’s Medford District during the summer of 2012. Sites included eleven lakes, ponds or reservoirs and six reaches along the Rogue and Applegate Rivers. Five sampling areas surveyed during 2010 and 2011 were revisited to determine the extent of known non-native species infestations, positively identify rare species, or verify the absence of an expected non-native species. Plant specimens were collected at up to 50 sites at each waterbody using plant rakes or by observation. The non-native submersed species curly leaf pondweed (Potamogeton crispus) and …

Aquatic Invasive Species Surveys Of Upper Klamath Lake, Fourmile Lake, And Lake Of The Woods, Or During 2012, Rich Miller, Mark D. Sytsma

Center for Lakes and Reservoirs Publications and Presentations

Three lakes located within the Klamath River Basin in Oregon (Upper Klamath Lake, Fourmile Lake, and Lake of the Woods) were surveyed for aquatic invasive species during the summer of 2012. Specimens were collected using plant rakes, benthic dredges, plankton nets, and crayfish traps. No invasive aquatic plants, gastropods, snails, bivalves or crayfish were detected in the lakes.

Aquatic Invasive Species Surveys Of Pacificorp’S North Umpqua River Impoundments, Rich Miller, Mark D. Sytsma, Vanessa Howard Morgan

Center for Lakes and Reservoirs Publications and Presentations

Ten North Umpqua Hydroelectric Project impoundments were surveyed for aquatic invasive species during the summer of 2012. One non-native submersed aquatic vegetation species (Potamogeton crispus) and one non-native snail species (Radix auricularia) was detected. No crayfish or mussel veligers were collected and no non-native zooplankton species were encountered.

Effects Of Molecular Structure Of The Oxidation Products Of Reactive Atmospheric Hydrocarbons On The Formation Of Secondary Organic Particulate Matter, Including The Effects Of Water, Negar Niakan

Dissertations and Theses

Organic aerosols have significant effects on human health, air quality and climate. Secondary organic aerosols (SOA) are produced by the oxidation of primary-volatile organic compounds (VOC). For example, α-pinene reacts with oxidants such as hydroxyl radical (OH), ozone (O₃), and nitrate radical (NO₃), accounting for a significant portion of total organic aerosol in the atmosphere. Experimental studies have shown that the oxidation process between α-pinene and ozone has the most significant impact in the formation of SOA (Hoffmann et al., 1997). Most of the models used to predict SOA formation, however, are limited in that they …

Impacts Of Predicted Global Sea-Level Rise On Oregon Beaches And Tidelands, Curt D. Peterson

Geology Faculty Publications and Presentations

Forward by:

Phillip Johnson, Executive Director Oregon Shores Conservation Coalition

The Oregon Shores Conservation Coalition’s "Coastal Climate Change Adaptation Project" is under development as an experiment in grassroots organizing for adaptive planning for expected climate change impacts. Oregon Shores is a regional conservation group with a 40-year history of working to protect marine, shoreline, estuarine and other coastal habitats. The organization’s board and staff came to recognize that the likely effects of climate change—rising sea levels, more intensive storm surges, increased erosion, lower-river flooding, among others—would affect every aspect of the group’s work. Consequently, a new program, the Climate Action …

Analyzing Experimental Data And Model Parameters: Implications For Predictions Of Soa Using Chemical Transport Models, Kelley Barsanti, Annmarie G. Carlton, Serena H. Chung

Civil and Environmental Engineering Faculty Publications and Presentations

Despite critical importance for air quality and climate predictions, accurate representation of secondary organic aerosol (SOA) formation remains elusive. An essential addition to the ongoing discussion of improving model predictions is an acknowledgement of the linkages between experimental conditions, parameter optimization and model output, as well as the linkage between empirically-derived partitioning parameters and the physicochemical properties of SOA they represent in models. In this work, a "best available" set of SOA modeling parameters is selected by comparing predicted SOA yields and mass concentrations with observed yields and mass concentrations from a comprehensive list of published smog chamber studies. Evaluated …

Final Coastal Lakes Aquatic Plant Survey Report, Mary Pfauth, Mark Sytsma

Center for Lakes and Reservoirs Publications and Presentations

Invasive, non-indigenous plants can degrade water quality and fish habitat when they invade lakes, ponds, and streams. Changes in plant community architecture in lakes due to invasion by canopy-forming invasive aquatic plants can result in loss of native plant biodiversity and reduction of the structural complexity of the underwater habitat.

Osmb Ais Funds Final Report: Task 1 Boat Ramp Monitoring For New Zealand Mud Snails, Valance Brenneis, Samuel Cimino, Angela L. Strecker

Center for Lakes and Reservoirs Publications and Presentations

The New Zealand mud snail (Potamopyrgus antipodarum; NZMS) is an invasive species found in a variety of ecosystems in Oregon, including brackish estuaries, heavily used recreational rivers, and highly trafficked coastal freshwater lakes. NZMS are an invasive species of concern because once established, they may out-compete native invertebrate grazers, such as native insect larvae that provide important food resources for fish, and NZMS themselves provide little nutritional value. Monitoring for the presence and population density of NZMS was performed at boat ramps located along several water bodies in 2006 – 2007. These water bodies were then re-sampled during the summer …

Use Of International Hydrographic Organization Tidal Data For Improved Tidal Prediction, Songwei Qi

Dissertations and Theses

Tides are the rise and fall of water level caused by gravitational forces exerted by the sun, moon and earth. Understanding sea level variation and its impact currents is very important especially in coastal regions. With knowledge of the tide-generating force and boundary conditions, hydrodynamic models can be used to predict or model tides in coastal regions. However, these models are not sufficiently accurate, and in-situ tide gauge data may be used to improve them in coastal regions. The International Hydrographic Organization (IHO) tidal data bank consists of over 4000 tide gauge stations scattered all around the globe, most of …

Stream-Associated Amphibian Habitat Assessment In The Portland-Vancouver Metropolitan Region, Andrew Evans Dietrich

Dissertations and Theses

This study assessed the influence of landscape development on stream-associated amphibians in forested riparian areas within the Portland-Vancouver metropolitan region. Human alteration of landscapes may dramatically affect the ecology of neighboring aquatic systems. It was hypothesized that lotic amphibians would be negatively associated with greater amounts of landscape development and positively associated with forested area within the surrounding watershed. Thirty-seven 1st-3rd order streams were sampled between June 21st and September 21st in 2011. Streams potentially providing adequate habitat for stream-obligate amphibians were randomly selected. Amphibians were surveyed along 30-meter stream transects using an active-cover search (ACS). Environmental variables associated with …

An Analysis Of The Impact Of Global Warming On Hurricane Activity In The United States, Jesse Senzer

Anthós

This paper discusses the influence of global warming on ocean temperatures, and explains how vertical wind shear affects hurricane formation. It explores the scientific arguments against linking global warming to increased hurricanes, that ocean warming increases vertical wind shear in the main development region for Atlantic hurricanes, and that current/recent American hurricane trends fall within the realm of natural, multidecadal oscillations. Arguments supporting the link between global warming and hurricanes are addressed with climate modeling that links sea surface temperature (SST) increase to anthropogenic causes. It discusses SST’s influencing hurricane activity globally, if not locally to the U.S., and points …

Links From Mantle To Microbe At The Lau Integrated Study Site: Insights From A Back-Arc Spreading Center, Margaret K. Tivey, Erin Becker, Roxanne Beinart, Charles R. Fisher, Peter Girguis, Charles H. Langmuir, Peter J. Michael, Anna-Louise Reysenbach

Biology Faculty Publications and Presentations

The Lau Integrated Study Site (ISS) has provided unique opportunities for study of ridge processes because of its back-arc setting in the southwestern Pacific. Its location allows study of a biogeographical province distinct from those of eastern Pacific and mid-Atlantic ridges, and crustal compositions along the ridge lie outside the range of mid-ocean ridge crustal compositions. The Lau ISS is located above a subduction zone, at an oblique angle. The underlying mantle receives water and other elements derived from the downgoing lithospheric slab, with an increase in slab influence from north to south. Water lowers the mantle melting temperature and …

Where Is The Rain-On-Snow Zone In The West-Central Washington Cascades?: Monte Carlo Simulation Of Large Storms In The Northwest, Matthew John Brunengo

Dissertations and Theses

Rain-on-snow (ROS) occurs when warm, wet air moves into latitudes and/or elevations having vulnerable snowpacks, where it can alter water inputs to infiltration, runoff and erosion. The Pacific Northwest is particularly susceptible: winter storms off the Pacific cause locally heavy rain plus snowmelt almost annually, and disastrous flooding and landsliding intermittently. In maritime mountainous terrain, the effects seem more likely and hydrologically important where warm rains and seasonal snowpacks are liable to coincide, in middle elevations. Several questions arise: (1) In the PNW, does ROS affect the long-term frequency and magnitude of water delivery to the ground, versus total precipitation …

Greenhouse Gas Fluxes In Southeastern U.S. Coastal Plain Wetlands Under Contrasting Land Uses, Jennifer L. Morse, Marcelo Ardón, Emily S. Bernhardt

Environmental Science and Management Faculty Publications and Presentations

Whether through sea level rise or wetland restoration, agricultural soils in coastal areas will be inundated at increasing rates, renewing connections to sensitive surface waters and raising critical questions about environmental trade-offs. Wetland restoration is often implemented in agricultural catchments to improve water quality through nutrient removal. Yet flooding of soils can also increase production of the greenhouse gases nitrous oxide and methane, representing a potential environmental trade-off. Our study aimed to quantify and compare greenhouse gas emissions from unmanaged and restored forested wetlands, as well as actively managed agricultural fields within the North Carolina coastal plain, USA. In sampling …

Groundwater Surface Trends In The North Florence Dunal Aquifer, Oregon Coast, Usa, Sarah Rebecca Doliber

Dissertations and Theses

The North Florence Dunal Aquifer is the only feasible source for drinking water for the coastal city of Florence, Oregon and Florence's Urban Growth Boundary. High infiltration rates and a shallow groundwater table leave the aquifer highly susceptible to contamination from septic tank effluent, storm runoff, chemical fertilizers and recreational ATV use throughout the dunes. Public interest in the quality and quantity of the aquifer water has been sparked since the City of Florence received a grant from the Environmental Protection Agency for a watershed protection and restoration project. Delineation of the shallow groundwater surface and its relationship to the …

Community Earth System Model: Implementation, Validation, And Applications, William Christian Porter

Dissertations and Theses

The Community Earth System Model (CESM) is a coupling of five different models which are combined to simulate the dynamic interactions between and within the Earth's atmosphere, ocean, land, land-ice, and sea-ice. In this work, the installation and testing of CESM on Portland State University's Cluster for Climate Change and Aerosol Research (CsAR) is described and documented, and two research applications of the model are performed. First, the improved treatment of cloud microphysics within recent versions of CESM's atmospheric module is applied to an examination of changes in shortwave cloud forcing (SWCF) and results are compared to output from older …

Climate Change Effects And Water Vulnerability In The Molalla Pudding River Basin, Oregon, Usa, Susan Amelia Wherry

Dissertations and Theses

Water management plans are typically developed using historical data records and historical return periods for extreme events, such as floods or droughts. Since these analyses of return periods typically assume a certain degree of stationarity (constant mean, standard deviation, distribution) in hydrologic variables, the potential future impacts of climate change are excluded. In developing water management plans, predicted changes to climate variables should be considered to evaluate the degree of non-stationarity that may exist in the future. In this way, regions most sensitive to climate change can be identified and managed appropriately. This study performed such a task by using …

Late Pleistocene And Holocene Aged Glacial And Climatic Reconstructions In The Goat Rocks Wilderness, Washington, United States, Joshua Andrews Heard

Dissertations and Theses

Eight glaciers, covering an area of 1.63 km2, reside on the northern and northeastern slopes of the Goat Rocks tallest peaks in the Cascades of central Washington. At least three glacial stands occurred downstream from these glaciers. Closest to modern glacier termini are Little Ice Age (LIA) moraines that were deposited between 1870 and 1899 AD, according to the lichenometric analysis. They are characterized by sharp, minimally eroded crests, little to no soil cover, and minimal vegetation cover. Glacier reconstructions indicate that LIA glaciers covered 8.29 km2, 76% more area than modern ice coverage. The average LIA equilibrium line altitude …

Survey Of Aquatic Invasive Species In Selected Umpqua National Forest Lakes And Ponds, Mark D. Sytsma, Rich Miller

Center for Lakes and Reservoirs Publications and Presentations

Eleven lakes and ponds within the Umpqua National Forest were surveyed for invasive aquatic macrophytes, snails, bivalves, and crayfish during the summer of 2011. Yellow floating heart (Nymphoides peltata), an invasive floating leaf macrophyte species, was detected in Willow Sump within the Little River drainage. European ear snails (Radix auricularia), an invasive species present in several Umpqua National Forest waterbodies, were detected in Beaver Pond within the Steamboat Creek drainage. One native crayfish species, the signal crayfish (Pacifastacus leniusculus), was observed in Crayfish Lake within the Brice Creek drainage. Diverse assemblages of native plant species were observed in the lakes …

Ensemble Methods For Dynamic Data Assimilation Of Chemical Observations In Atmospheric Models, Adrian Sandu, Emil Constantinescu, Gregory R. Carmichael, Tianfeng Chai, Dacian Daescu, John H. Seinfeld

Mathematics and Statistics Faculty Publications and Presentations

The task of providing an optimal analysis of the state of the atmosphere requires the development of dynamic data-driven systems (DDDAS) that efficiently integrate the observational data and the models. Data assimilation, the dynamic incorporation of additional data into an executing application, is an essential DDDAS concept with wide applicability. In this paper we discuss practical aspects of nonlinear ensemble Kalman data assimilation applied to atmospheric chemical transport models. We highlight the challenges encountered in this approach such as filter divergence and spurious corrections, and propose solutions to overcome them, such as background covariance inflation and filter localization. The predictability …

Aquatic Plant Surveys In The Bureau Of Land Management, Medford District, 2010-2011, Mark D. Sytsma, Rich Miller, Vanessa Morgan

Center for Lakes and Reservoirs Publications and Presentations

The introduction of invasive aquatic plant species (IAPS) can cause significant ecological and economic harm. IAPS can displace native aquatic plant species, impair recreation, and degrade water quality. Early detection of new invasions can improve chances for successful eradication or containment to reduce the risk of IAPS spread. The Oregon Department of Agriculture (ODA) lists the most egregious offenders as “Noxious Weeds” which are defined as plants classified by the Oregon State Weed Board that are injurious to public health, agriculture, recreation, wildlife, or any public or private property (ODA 2011).

Several IAPS classified as noxious have been detected within …

2011 Aquatic Weed Surveys In Timothy Lake, Lake Harriet And North Fork Reservoir : Final Report, Mark D. Sytsma, Vanessa Howard Morgan

Center for Lakes and Reservoirs Publications and Presentations

Portland General Electric (PGE) was issued a new license by the Federal Energy Regulatory Commission (FERC) for the continued operation and maintenance of the Clackamas River Hydroelectric Project No. 2195 (Project) on December 21, 2010. This Project is located on both the lower 16 miles of Oak Grove Fork of the Clackamas River (Oak Grove Fork) and the mainstem of the Clackamas River in Clackamas County, Oregon. The effects of relicensing this Project were addressed in the Final Environmental Impact Statement (FEIS) completed in December 2006 and included the issue of invasive aquatic weed species. The term “aquatic weed” is …