Oceanography and Atmospheric Sciences and Meteorology Commons^™

The Adaptations Of The Sulfur-Oxidizing, Gammaproteobacterium "Candidatus Endoriftia Persephone", Endosymbiont Of The Giant Tubeworm Riftia Pachyptila, To Hydrothermal Vent Habitat Heterogeneity, Juliana M. Leonard

USF Tampa Graduate Theses and Dissertations

The siboglinid tubeworm Riftia pachyptila is a dominant member of the deep-sea megafauna where seawater and hydrothermal vent (HTV) effluent interface and mix. It is one of the fastest growing invertebrates on land or in the sea. It does not have a digestive tract (e.g. mouth, gut, or anus), and is completely dependent on its sulfur-oxidizing endosymbiont, the Gammaproteobacterium “Candidatus Endoriftia persephone” for its nutritional requirements. This association was the first and is the most well studied among chemolithoautotrophic symbioses. “Ca. E. persephone” is a chemolithoautotrophic bacterium that oxidizes sulfide as an electron donor for energy, reduces oxygen as a …

Weather And Climate Summary And Forecast: November 2019 Report, Gregory V. Jones

Linfield University Wine Studies Reports

This report provides a summary of the weather and climate forecast for November 2019. It includes forecast information specific to the Pacific Northwest and the western United States, as well as forecast information for other portions of the United States and abroad.

Habitat Associations And Reproduction Of Fishes On The Northwestern Gulf Of Mexico Shelf Edge, Elizabeth Marie Keller

LSU Doctoral Dissertations

Several of the northwestern Gulf of Mexico (GOM) shelf-edge banks provide critical hard bottom habitat for coral and fish communities, supporting a wide diversity of ecologically and economically important species. These sites may be fish aggregation and spawning sites and provide important habitat for fish growth and reproduction. Already designated as habitat areas of particular concern, many of these banks are also under consideration for inclusion in the expansion of the Flower Garden Banks National Marine Sanctuary. This project aimed to gain a more comprehensive understanding of the communities and fish species on shelf-edge banks by way of gonad histology, …

Inferred Function And Dynamics Of Microbial Communities From The Northern Gulf Of Mexico, Deepesh Tourani

HCNSO Student Theses and Dissertations

Microbial communities, or microbiomes, are the major drivers of global biogeochemical cycles, acting as primary producers and decomposers across the water column in the oceans. Thus, they reflect changes in physicochemical properties and nutrient composition of the ocean. However, this correlation between ecological changes and the function of marine microbiomes is poorly understood. Large-scale oceanic events such as the bottom-water oxygen-depleted zone (i.e., “dead zone”) and the Deepwater Horizon oil spill in the Gulf of Mexico (GoM) render the ecosystem fragile. These events decrease survival rates of pelagic and coastal macrofauna and affect the biodiversity of the region. As part …

Seaflow Data V1, High-Resolution Abundance, Size And Biomass Of Small Phytoplankton In The North Pacific, François Ribalet, Chris Berthiaume, Annette Hynes, Jarred Swalwell, Michael Carlson, Sophie Clayton, Gwenn Hennon, Camille Poirier, Eric Shimabukuro, Angelicque White, E. Virginia Armhurst

OES Faculty Publications

SeaFlow is an underway flow cytometer that provides continuous shipboard observations of the abundance and optical properties of small phytoplankton (μm in equivalent spherical diameter, ESD). Here we present data sets consisting of SeaFlow-based cell abundance, forward light scatter, and pigment fluorescence of individual cells, as well as derived estimates of ESD and cellular carbon content of picophytoplankton, which includes the cyanobacteria Prochlorococcus, Synechococcus and small-sized Crocosphaera (μm ESD), and picophytoplankton and nanophytoplankton (2–5 μm ESD). Data were collected in surface waters (≈5 m depth) from 27 oceanographic cruises carried out in the Northeast Pacific Ocean between 2010 and 2018. …

Closing The Oxygen Mass Balance In Shallow Coastal Ecosystems, Matthew H. Long, Jennie E. Rheuban, Daniel C. Mccorkle, David J. Burdige, Richard C. Zimmerman

OES Faculty Publications

The oxygen concentration in marine ecosystems is influenced by production and consumption in the water column and fluxes across both the atmosphere-water and benthic-water boundaries. Each of these fluxes has the potential to be significant in shallow ecosystems due to high fluxes and low water volumes. This study evaluated the contributions of these three fluxes to the oxygen budget in two contrasting ecosystems, a Zostera marina (eelgrass) meadow in Virginia, U.S.A., and a coral reef in Bermuda. Benthic oxygen fluxes were evaluated by eddy covariance. Water column oxygen production and consumption were measured using an automated water incubation system. Atmosphere-water …

Changes In Pm2.5 Peat Combustion Source Profiles With Atmospheric Aging In An Oxidation Flow Reactor, Judith C. Chow, Junji Cao, Lung-Wen Anthony Chen, Xiaoliang Wang, Qiyuan Wang, Jie Tian, Steven Sai Hang Ho, Adam C. Watts, Tessa B. Carlson, Steven D. Kohl, John G. Watson

Environmental & Global Health Faculty Research

Smoke from laboratory chamber burning of peat fuels from Russia, Siberia, the USA (Alaska and Florida), and Malaysia representing boreal, temperate, subtropical, and tropical regions was sampled before and after passing through a potential-aerosol-mass oxidation flow reactor (PAM-OFR) to simulate intermediately aged (∼2 d) and well-aged (∼7 d) source profiles. Species abundances in PM2.5 between aged and fresh profiles varied by several orders of magnitude with two distinguishable clusters, centered around 0.1 % for reactive and ionic species and centered around 10 % for carbon. Organic carbon (OC) accounted for 58 %–85 % of PM2.5 mass in fresh profiles with …

Weather And Climate Summary And Forecast: October 2019 Report, Gregory V. Jones

Linfield University Wine Studies Reports

This report provides a summary of the weather and climate forecast for October 2019. It includes forecast information specific to the Pacific Northwest and the western United States, as well as forecast information for other portions of the United States and abroad.

The Influence Of Location, Positioning, And Seasonality On Feeding Behavior Of The Sydney Oyster (Saccostrea Glomerata) In New South Wales, Australia, Nathaniel Hess

Independent Study Project (ISP) Collection

Oysters are hard shelled bivalves that aggregate over time to create structures in estuarine systems, known as oyster reefs. These reefs are important for the promotion of estuarine biodiversity by supporting many species of fish, invertebrates, and plants. They also act as a key contributor to water health by using active suspension feeding mechanisms and selective feeding to remove nutrients and water borne pollutants from estuarine systems. They have been touted as possible bio-remediators. They also effect rates of sedimentation in estuaries.

Oyster reefs have historically been threatened by anthropogenic influences such as overharvesting, destructive fishing practices, water pollution, CO2 …

A Delicate Balance: The Effects Of Habitat Type On Frog Communities: A Three-Pronged Study Examining The Effects Of Differing Habitat Characteristics On Anuran Diversity At El Centro De Investigación Sumak Kawsay In Situ, Ecuador, Zane Libke

Independent Study Project (ISP) Collection

We conducted 60 hours of visual encounter surveys and 3 hours of calling surveys on 6 different habitat types near Sumak Kawsay in situ Reserva (SKIS) near Mera, Pastaza, Ecuador. We defined habitat types defined by two variables: type of forest and proximity to water. The aim of the study was to determine what effect each variable has on anuran community composition. We compared the effectiveness of the two survey methods as well. High anuran community dissimilarity was found between each habitat type surveyed, indicating that both forest type and proximity to water are important factors that shape species richness …

36 Years After The Species' Mass-Mortality: Diadema Antillarum Test Sizes, Population Densities, And Substrate Preferences In Three Guna Yala Reefs Near Wichub Wala Island, Bimini Horstmann

Independent Study Project (ISP) Collection

In January 1983, a waterborne pathogen beginning near the Atlantic Panama Canal entrance caused history's largest recorded marine animal die-off, wiping out 95-99% of Diadema antillarum populations throughout the Caribbean. D. antillarum, the long-spined sea urchin, is a keystone herbivore in coral reefs and its decreased densities have caused many reefs to suffer macroalgal phase shifts. Modest recovery of this species has been documented in some Caribbean locations, but reefs in Guna Yala, Panama continued to experience population decline. This study investigates density, test size, and substrate preferences of D. antillarum in three shallow coral reef areas to update the …

Optimizing Water Quality And Temperature Parameters To Increase Survival Rates Of Anotheca Spinosa (Anura: Hylidae) Eggs At The El Valle Amphibian Conservation Center, Morgan Oestereich

Independent Study Project (ISP) Collection

Amphibians globally are facing extinction due to the fungus Batrachochytrium dendrobatidis (Bd). This has resulted in a worldwide push for increased conservation efforts. These efforts include those of the El Valle Amphibian Conservation Center (EVACC) in El Valle de Antón, Panama, where captive assurance colonies of many native amphibian species are housed. Among these species is Anotheca spinosa, a species of tree frog native to mountainous regions of Central America. This study was performed to analyze the relationship between water quality parameters and egg survival and reproductive success of EVACC’s captive population of A. spinosa and assess how related husbandry …

Climate-Smart Agriculture: Building Resilience For Women Farmers In Kalchebeshi, Nepal, Annika Ruben

Independent Study Project (ISP) Collection

This case study outlines women’s involvement in climate-smart agriculture and key climate adaptation strategies which are being implemented in the town of Kalchebeshi, Nepal. Kalchebeshi is considered a Resilient Mountain Village because of the town’s integrated approach to addressing climate change and building resilience for farmers. Key findings examined gender differences in farming responsibilities and the significance of farmers’ groups in women’s overall decision making and community involvement. Additionally, changes in water management and pesticide use have been shown to have a positive impact on the lives of women farmers in Kalchebeshi. This paper reinforces the importance of involving vulnerable …

The Relationship Between Forest Management And Stream Discharge In Mazumbai And Baga Ii Forest Reserves, Tanga Region, Tanzania, Shannon Duffy

Independent Study Project (ISP) Collection

Deforestation is known to alter hydrology by reducing interception, transpiration and infiltration capacity, and increasing runoff which all leads to higher stream discharge. For rural Tanzanian communities, surface water resources are crucial for meeting basic needs, so the integrity of headwater catchments need to be maintained to ensure their reliability. The objectives of this study were to a) map the streams in the two forests because none currently exist and b) determine the effect of deforestation on discharge variability. Over fifteen days of data collection, this study analyzed variability of discharge and the degree of correlation between discharge and rainfall …

Vulnerability And Adaptability Of Mangrove Forests On Misali Island, Zanzibar, Tanzania, Samantha A. Smith

Independent Study Project (ISP) Collection

As climate change threatens to cause heightened sea levels and decreased rainfall patterns in the Indian Ocean, mangrove forests are forced to adapt or suffer. This study aims to analyze the persistence of four prominent mangrove forests on Misali Island based on vulnerability and adaptability. The study focuses on three types of forests: overwash, coastal fringing, and scrub. Forest A, an overwash forest, was the main site of study and was surveyed for species type and seedling/sapling counts using ten transects which ranged from 40 to 91.7 meters in length. Data was analyzed in order to determine biodiversity, zonation, and …

What About The Environment?: Exploring The Neglected Third Dimension Of Antimicrobial Resistance, Paige E. Montfort

Independent Study Project (ISP) Collection

Antimicrobial resistance (AMR) is one of the most urgent and complex health risks of our time, with links to human health, animal health, and the environment. The majority of research and policy related to AMR, however, has been dedicated to human and animal health. The third dimension — the environment — has been relatively neglected. Conversations about this problem have begun, but gaps in understanding remain. This study explores the key barriers that have hindered developments related to the environmental aspect of AMR and some of the solutions that have begun to or could be utilized to overcome these barriers. …

Cambios En El Cronograma De Temporadas Reproductivas De Pingüinos De Magallanes (Spheniscus Magellanicus): Relaciones Entre Eventos Fenológicos Y Variables Climáticas, Grace Neumiller

Independent Study Project (ISP) Collection

Estudios a largo plazo han demostrado que hay fluctuaciones a lo largo de la fenología de la vida silvestre a causa de los cambios climáticos (Black, 2016). Los pingüinos de Magallanes (Spheniscus magellanicus) exhiben cambios en el cronograma de los eventos fenológicos de sus temporadas reproductivas a causa de variables oceanográficas y climáticas de su ambiente. A partir de fotos de cámaras trampas, este trabajo describe y analice algunos eventos en la fenología de los pingüinos de Magallanes en Isla Martillo, Canal Beagle, Tierra del Fuego, Argentina: el inicio de la temporada reproductiva, el periodo de muda de pichones, y …

An Evaluation Of Soils On Sólheimajökull Glacier Foreland: Using Invertebrates And Decomposition As Bio-Indicators Of Soil Quality, Carolyn Weisman

Independent Study Project (ISP) Collection

Anthropogenic climate change has led to the retreat of glaciers globally. As glaciers melt, they expose the underlying land- termed the glacier foreland. These forelands provide a natural laboratory for studying ecological succession after a massive disturbance, which is in this case glaciation. In this study, soil invertebrates and decomposition are used as bio-indicators of the soil quality in the foreland of Sólheimajökull Outlet Glacier. Soil cores were collected from five sites (A-E) located 300m apart moving away from the glacier terminus. The abundance of each observed invertebrate taxa and the dissolved oxygen (DO) levels were taken for 30 soil …

Wildlife In Parks And Communities: Institutionalizing Wildlife Conservation In Park Systems Through Municipal-Wide Planning Efforts, John J. Pipoly Iii, Lajuan Tucker, Patrick Fitzgerald, Scott Gilmore

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Wildlife populations are declining in the United States. As development increases, local parks and natural areas often become safe-havens for wildlife, including birds, pollinators and small mammals. Creeks, rights-of-way, roadsides and even private, commercial and public landscapes can create corridors for wildlife in urban and suburban areas, helping wildlife survive and minimizing human-wildlife conflicts. While many park departments and municipalities have some nature or wildlife programs at nature centers and public parks or manage some properties as natural areas, most do not integrate best practices for managing wildlife into park and recreation master plans or municipalwide sustainability, green infrastructure or …

A Toolkit For Managing The Ee (Environmental Education) And Esd (Education For Sustainable Development) Continuum, Attiyya Atkins, John J. Pipoly Iii

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Environmental Education (EE) and Education for Sustainable Development (ESD) represent extremes of a global continuum. EE stresses awareness of process about, from and for the environment (Vrasidas 2007). ESD is defined as education empowering communities to acquire best management practices engendering human, social, economic and natural sustainability (UNESCO 2012) and developing their resilience despite environmental changes (Fastenrath et al. 2019). ESD is a critical component of the UN's Sustainable Development Goals (UN 2012), which grew from the Millennium Development Goals (UN 2000). Each park agency should develop research-based educational programs that address both EE and ESD. The ESD must promote …

Weather And Climate Summary And Forecast: September 2019 Report, Gregory V. Jones

Linfield University Wine Studies Reports

This report provides a summary of the weather and climate forecast for September 2019. It includes forecast information specific to the Pacific Northwest and the western United States, as well as forecast information for other portions of the United States and abroad.

Shifts In Plant Functional Composition Following Long-Term Drought In Grasslands, Robert J. Griffin‐Nolan, Dana M. Blumenthal, Scott L. Collins, Timothy E. Farkas, Ava M. Hoffman, Kevin E. Mueller, Troy W. Ocheltree, Melinda D. Smith, Kenneth D. Whitney, Alan K. Knapp

Biological, Geological, and Environmental Faculty Publications

1. Plant traits can provide unique insights into plant performance at the community scale. Functional composition, defined by both functional diversity and community-weighted trait means (CWMs), can affect the stability of above-ground net primary production (ANPP) in response to climate extremes. Further complexity arises, however, when functional composition itself responds to environmental change. The duration of climate extremes, such as drought, is expected to increase with rising global temperatures; thus, understanding the impacts of long-term drought on functional composition and the corresponding effect that has on ecosystem function could improve predictions of ecosystem sensitivity to climate change.

2. We experimentally …

An Analysis Of The Potential Toxicological Effects Of Marine Plastics And Associated Organic And Inorganic Toxic Compounds On Six Commercially Significant Fishery Species, Nicole Marie Jackson

HCNSO Student Capstones

Marine plastics are a global issue which has garnered significant support for mitigation efforts in recent history. Research on the prevalence of plastic polymers in the marine environment has also come to the forefront of the scientific community, however studies on the toxicological impacts of their presence remains to be a little studied matter to date. In this study an intensive critical review of existing data was conducted to compile profiles (including: stability ranks, sorption capacities, organic and inorganic toxic constituent concentrations, bioaccumulations scores per constituent, biomagnification scores per constituent, and totaled threat scores out of five) for the three …

Odu Launches Open Seas Technology Innovation Hub, News @ Odu

News Items

No abstract provided.

Seastar: A Mission To Study Ocean Submesoscale Dynamics And Small-Scale Atmosphere-Ocean Processes In Coastal, Shelf And Polar Seas, Christine Gommenginger, Bertrand Chapron, Andy Hogg, Christian Buckingham, Baylor Fox-Kemper, Leif Eriksson, Francois Soulat, Clement Ubelmann, Francisco Ocampo-Torres, Bruno Buongiorno Nardelli, David Griffin, Paco Lopez-Dekker, Per Knudsen, Ole Andersen, Lars Stenseng, Neil Stapleton, William Perrie, Nelson Violante-Carvalho, Johannes Schulz-Stellenfleth, David Woolf, Jordi Isern-Fontanet, Fabrice Ardhuin, Patrice Klein, Alexis Mouche, Ananda Pascual, Xavier Capet, Daniele Hauser, Ad Stoffelen, Rosemary Morrow, Lotfi Aouf, Øyvind Breivik, Lee-Leung Fu, Johnny A. Johannessen, Yevgeny Aksenov, Lucy Bricheno, Joel Hirschi, Adrien C. H. Martin, Adrian P. Martin, George Nurser, Jeff Polton, Judith Wolf, Harald Johnsen, Alexander Soloviev, Gregg A. Jacobs, Fabrice Collard, Steve Groom, Vladimir Kudryavtsev, John Wilkin, Victor Navarro, Alex Babanin, Matthew Martin, John Siddorn, Andrew Saulter, Tom Rippeth, Bill Emery, Nikolai Maximenko, Roland Romeiser, Hans Graber, Aida Alvera Azcarate, Chris W. Hughes, Doug Vandemark, Jose Da Silva, Peter Jan Van Leeuwen, Alberto Naveira-Garabato, Johannes Gemmrich, Amala Mahadevan, Jose Marquez, Yvonne Munro, Sam Doody, Geoff Burbidge

Marine & Environmental Sciences Faculty Articles

High-resolution satellite images of ocean color and sea surface temperature reveal an abundance of ocean fronts, vortices and filaments at scales below 10 km but measurements of ocean surface dynamics at these scales are rare. There is increasing recognition of the role played by small scale ocean processes in ocean-atmosphere coupling, upper-ocean mixing and ocean vertical transports, with advanced numerical models and in situ observations highlighting fundamental changes in dynamics when scales reach 1 km. Numerous scientific publications highlight the global impact of small oceanic scales on marine ecosystems, operational forecasts and long-term climate projections through strong ageostrophic circulations, large …

Weather And Climate Summary And Forecast: August 2019 Report, Gregory V. Jones

Linfield University Wine Studies Reports

This report provides a summary of the weather and climate forecast for August 2019. It includes forecast information specific to the Pacific Northwest and the western United States, as well as forecast information for other portions of the United States and abroad.

Prediction Of Wind Power Density For Electricity Generation At Makambako, Tanzania Using Auto-Regression Integrated Moving Average (Arima) Model, Josam Samson, Reuben Kainkwa

Tanzania Journal of Science

Wind speed data used in this study were from Makambako and were recorded at a height of 10 m. In the analysis, the data were extrapolated to 80 m above ground level and wind speed from July to November were found to have an average value of 17.58 m/s. November was found to be the windiest month for the whole duration while the calm month was found to be March. The wind power density was found to be highest in the month of November for the whole study duration. The months of July to November have higher wind power density …

New Host Records And Range Extensions For Helminth Parasites From Wading Birds In Southeastern Florida, Sarah Gumbleton, David Kerstetter, Amy Hirons, Christopher Blanar

Marine & Environmental Sciences Faculty Articles

Six species of wading birds collected from wildlife centers throughout South Florida were dissected for parasites. Twenty-six species of parasites represent new host records and five parasite species represent new geographic range extensions.

Evaluating Responses Of Benthic Macrofauna To Artificial Reef Presence In The Gulf Of Mexico, Douglas Faircloth

Theses and Dissertations

Artificial reef research has long concerned itself with the interactions of fishes and has tended to favor commercially valuable species. Because of this, a larger yet less known group that heavily benefits fishes have been overlooked; benthic macrofauna. Benthic macrofauna are marine invertebrates that live below the sediment-water interface and play many roles in the ecosystem. Macrofauna are important prey items, ecosystem engineers, and bioindicators, as well as being ubiquitous in the marine environment. Since macrofauna have been largely ignored in this field, not much is known regarding their interaction with the placement of artificial reefs. To try and fill …

Developing Multispectral Imaging Techniques To Determine Canopy Coverage And Carbon Storage Of Seagrasses In The Gulf Of Mexico, Ivy Michelle Hinson

Theses and Dissertations

Although seagrass beds provide global ecosystem services, coverage is in rapid decline, with the capacity of seagrasses to sequester carbon of special concern. Current seagrass monitoring methods are labor intensive and may not offer a complete picture of coverage. Remote sensing offers the ability to oversee landscapes but water in coastal environments presents challenges, as the commonly used near-infrared wavelength dissipates in water.

This project aimed to provide reliable methodology to assess seagrass coverage using multispectral imagery taken from an unmanned aerial vehicle and to provide evidence for the link between seagrass coverage and stored belowground carbon for common seagrasses …