Discrete Mathematics and Combinatorics Commons^™

Modeling The Probability Of N Clonal Rosettes In A Bromeliaceae Genetic Individual, Erin N. Bodine, Layla K. Lammers

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

On The Design Of A Framework For Large-Scale Exploratory Graph Analytics, Oliver Andres Alvarado Rodriguez

Dissertations

Large-scale exploratory graph analytics merges data science with high-performance computing to extract critical insights from network-representable data. Data scientists routinely analyze data from the natural, social, and computing sciences by representing it as networks, or graphs, where objects become vertices and their relationships become edges. This representation allows data scientists to add graph analytics to their toolbox. However, designing tools for large-scale exploratory graph analytics is challenging due to the complexities of graph algorithms, such as high communication in distributed systems and large memory demands. These challenges can lead to overly complex software, which limits usability and development to a …

Robust Spacecraft Autonomy For Deep Space Exploration In Special Euclidean Group Se(3), Matthew Wittal

Doctoral Dissertations and Master's Theses

Over the past half-century, humanity has gained extensive experience conducting manned spaceflight near Earth. Arguably, "near Earth" could even include the Moon — the most distant destination humans have reached. However, "near" in this work primarily refers low Earth orbit (LEO). One could argue that we have not truly left Earth since the Apollo, as spacecraft in some LEOs remain subject to atmospheric drag thus emphasizing their continued connection to Earth's immediate environment. Reflecting on this, it becomes clear that humanity has largely remained bound to Earth’s immediate vicinity since the Apollo missions reached the Moon. However, that is set …

Finding Combinatorial Patterns In Real Valued Omics Data, Kenneth Smith

Dissertations

Precision medicine is a healthcare approach which tailors disease prevention and treatment to an individual, based on their genetics, environment, lifestyle, and physiological state. These factors interact to produce biological changes that can be measured to produce data called omics, and include genomics, lipidomics, and proteomics. Despite the abundance of omics data and analysis techniques, researchers still struggle to identify biological findings that replicate across data sets and translate into clinical applications. In this dissertation, we employ combinatorial optimization techniques to improve upon three steps in the precision medicine analysis pipeline: 1) data cleaning, 2) community detection, and 3) feature …

Utilizing Graph Thickness Heuristics On The Earth-Moon Problem, Robert C. Weaver

Rose-Hulman Undergraduate Mathematics Journal

This paper utilizes heuristic algorithms for determining graph thickness in order to attempt to find a 10-chromatic thickness-2 graph. Doing so would eliminate 9 colors as a potential solution to the Earth-moon Problem. An empirical analysis of the algorithms made by the author are provided. Additionally, the paper lists various graphs that may or nearly have a thickness of 2, which may be solutions if one can find two planar subgraphs that partition all of the graph’s edges.

Modeling Repairable System Failure Data Using Nhpp Reliability Growth Mode., Eunice Ofori-Addo

EWU Masters Thesis Collection

Stochastic point processes have been widely used to describe the behaviour of repairable systems. The Crow nonhomogeneous Poisson process (NHPP) often known as the Power Law model is regarded as one of the best models for repairable systems. The goodness-of-fit test rejects the intensity function of the power law model, and so the log-linear model was fitted and tested for goodness-of-fit. The Weibull Time to Failure recurrent neural network (WTTE-RNN) framework, a probabilistic deep learning model for failure data, is also explored. However, we find that the WTTE-RNN framework is only appropriate failure data with independent and identically distributed interarrival …

Some Generalizations Of Classical Integer Sequences Arising In Combinatorial Representation Theory, Sasha Verona Malone

Masters Theses & Specialist Projects

There exists a natural correspondence between the bases for a given finite-dimensional representation of a complex semisimple Lie algebra and a certain collection of finite edge-colored ranked posets, laid out by Donnelly, et al. in, for instance, [Don03]. In this correspondence, the Serre relations on the Chevalley generators of the given Lie algebra are realized as conditions on coefficients assigned to poset edges. These conditions are the so-called diamond, crossing, and structure relations (hereinafter DCS relations.) New representation constructions of Lie algebras may thus be obtained by utilizing edge-colored ranked posets. Of particular combinatorial interest are those representations whose corresponding …

Squared Distance Matrix Of A Weighted Tree, Ravindra B. Bapat

Journal Articles

Let T be a tree with vertex set f1;: :: ; ng such that each edge is assigned a nonzero weight. The squared distance matrix of T; denoted by is the n n matrix with (i; j)-element d(i; j)2; where d(i; j) is the sum of the weights of the edges on the (ij)-path. We obtain a formula for the determinant of A formula for 1 is also obtained, under certain conditions. The results generalize known formulas for the unweighted case.

Modeling Stochastically Intransitive Relationships In Paired Comparison Data, Ryan Patrick Alexander Mcshane

Statistical Science Theses and Dissertations

If the Warriors beat the Rockets and the Rockets beat the Spurs, does that mean that the Warriors are better than the Spurs? Sophisticated fans would argue that the Warriors are better by the transitive property, but could Spurs fans make a legitimate argument that their team is better despite this chain of evidence?

We first explore the nature of intransitive (rock-scissors-paper) relationships with a graph theoretic approach to the method of paired comparisons framework popularized by Kendall and Smith (1940). Then, we focus on the setting where all pairs of items, teams, players, or objects have been compared to …

A High Quality, Eulerian 3d Fluid Solver In C++, Lejon Anthony Mcgowan

Computer Science and Software Engineering

Fluids are a part of everyday life, yet are one of the hardest elements to properly render in computer graphics. Water is the most obvious entity when thinking of what a fluid simulation can achieve (and it is indeed the focus of this project), but many other aspects of nature, like fog, clouds, and particle effects. Real-time graphics like video games employ many heuristics to approximate these effects, but large-scale renderers aim to simulate these effects as closely as possible.

In this project, I wish to achieve effects of the latter nature. Using the Eulerian technique of discrete grids, I …

Network Analytics For The Mirna Regulome And Mirna-Disease Interactions, Joseph Jayakar Nalluri

Theses and Dissertations

miRNAs are non-coding RNAs of approx. 22 nucleotides in length that inhibit gene expression at the post-transcriptional level. By virtue of this gene regulation mechanism, miRNAs play a critical role in several biological processes and patho-physiological conditions, including cancers. miRNA behavior is a result of a multi-level complex interaction network involving miRNA-mRNA, TF-miRNA-gene, and miRNA-chemical interactions; hence the precise patterns through which a miRNA regulates a certain disease(s) are still elusive. Herein, I have developed an integrative genomics methods/pipeline to (i) build a miRNA regulomics and data analytics repository, (ii) create/model these interactions into networks and use optimization techniques, motif …

On The Geodesic Centers Of Polygonal Domains, Haitao Wang

Computer Science Faculty and Staff Publications

In this paper, we study the problem of computing Euclidean geodesic centers of a polygonal domain P of n vertices. We give a necessary condition for a point being a geodesic center. We show that there is at most one geodesic center among all points of P that have topologically-equivalent shortest path maps. This implies that the total number of geodesic centers is bounded by the size of the shortest path map equivalence decomposition of P, which is known to be O(n^{10}). One key observation is a pi-range property on shortest path lengths when points are moving. With these observations, …

Hill's Diagrammatic Method And Reduced Graph Powers, Gregory D. Smith, Richard Hammack

Biology and Medicine Through Mathematics Conference

No abstract provided.