Other Computer Sciences Commons^™

A Multimodal Approach To Sarcasm Detection On Social Media, Dipto Das

Graduate Theses/Dissertations

In recent times, a major share of human communication takes place online. The main reason being the ease of communication on social networking sites (SNSs). Due to the variety and large number of users, SNSs have drawn the attention of the computer science (CS) community, particularly the affective computing (also known as emotional AI), information retrieval, natural language processing, and data mining groups. Researchers are trying to make computers understand the nuances of human communication including sentiment and sarcasm. Emotion or sentiment detection requires more insights about the communication than it does for factual information retrieval. Sarcasm detection is particularly …

Predicting Switch-Like Behavior In Proteins Using Logistic Regression On Sequence-Based Descriptors, Benjamin Strauss

Master's Projects

Ligands can bind at specific protein locations, inducing conformational changes such as those involving secondary structure. Identifying these possible switches from sequence, including homology, is an important ongoing area of research. We attempt to predict possible secondary structure switches from sequence in proteins using machine learning, specifically a logistic regression approach with 48 N-acetyltransferases as our learning set and 5 sirtuins as our test set. Validated residue binary assignments of 0 (no change in secondary structure) and 1 (change in secondary structure) were determined (DSSP) from 3D X-ray structures for sets of virtually identical chains crystallized under different conditions. Our …

Designing Of The Electronic Components Used In The Device For Biomedical Signals Measurement, H.N Zaynidinov, Sarvar Mahmudjonov

Bulletin of TUIT: Management and Communication Technologies

Wireless health care monitoring technologies have the energetic to replace our lifestyle with various application uses in the field of such as healthcare management, retailer, travels, company, dependents care and urgent management, in addition to many area for improving. Electrocardiography (ECG) is a common technique for recording the electrical activity of human heart. Accurate computer analysis of ECG signal is challenging, as it is exceedingly prone to high frequency noise and various other artifacts due to its low amplitude. The accuracy of these algorithms relies on the low-pass and high-pass filtration of the input ECG signal. In this paper, it …

Identifying Depression In The National Health And Nutrition Examination Survey Data Using A Deep Learning Algorithm, Jihoon Oh, Kyongsik Yun, Uri Maoz, Tae-Suk Kim, Jeong-Ho Chae

Psychology Faculty Articles and Research

Background

As depression is the leading cause of disability worldwide, large-scale surveys have been conducted to establish the occurrence and risk factors of depression. However, accurately estimating epidemiological factors leading up to depression has remained challenging. Deep-learning algorithms can be applied to assess the factors leading up to prevalence and clinical manifestations of depression.

Methods

Customized deep-neural-network and machine-learning classifiers were assessed using survey data from 19,725 participants from the NHANES database (from 1999 through 2014) and 4949 from the South Korea NHANES (K-NHANES) database in 2014.

Results

A deep-learning algorithm showed area under the receiver operating characteristic curve (AUCs) …

An Introduction To Declarative Programming In Clips And Prolog, Jack L. Watkin, Adam C. Volk, Saverio Perugini

Computer Science Faculty Publications

We provide a brief introduction to CLIPS—a declarative/logic programming language for implementing expert systems—and PROLOG—a declarative/logic programming language based on first-order, predicate calculus. Unlike imperative languages in which the programmer specifies how to compute a solution to a problem, in a declarative language, the programmer specifies what they what to find, and the system uses a search strategy built into the language. We also briefly discuss applications of CLIPS and PROLOG.

Mathematical Model And Algorithm For Calculating Complex Words In The Karakalpak Language, Shaxnoza Abidova

Bulletin of TUIT: Management and Communication Technologies

The article examines the morphology of the Karakalpak language, which belongs to the Kipchak group of the Turkic language family. The forms of word formation in the Karakalpak language, their sequences and the affixes added to the core are analyzed. On the basis of the analyzed affixes and suffixes, a complex mathematical model of word formation in the Karakalpak language was developed. On the basis of the developed mathematical model, an algorithm for creating a complex word in the Karakalpak language was developed. Using the developed mathematical model, a four-stage scheme was created for creating complex words of the Karakalpak …

Integration Of Random Forest Classifiers And Deep Convolutional Neural Networks For Classification And Biomolecular Modeling Of Cancer Driver Mutations, Steve Agajanian, Odeyemi Oluyemi, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

Development of machine learning solutions for prediction of functional and clinical significance of cancer driver genes and mutations are paramount in modern biomedical research and have gained a significant momentum in a recent decade. In this work, we integrate different machine learning approaches, including tree based methods, random forest and gradient boosted tree (GBT) classifiers along with deep convolutional neural networks (CNN) for prediction of cancer driver mutations in the genomic datasets. The feasibility of CNN in using raw nucleotide sequences for classification of cancer driver mutations was initially explored by employing label encoding, one hot encoding, and embedding to …

High-Performance Computing Frameworks For Large-Scale Genome Assembly, Sayan Goswami

LSU Doctoral Dissertations

Genome sequencing technology has witnessed tremendous progress in terms of throughput and cost per base pair, resulting in an explosion in the size of data. Typical de Bruijn graph-based assembly tools demand a lot of processing power and memory and cannot assemble big datasets unless running on a scaled-up server with terabytes of RAMs or scaled-out cluster with several dozens of nodes. In the first part of this work, we present a distributed next-generation sequence (NGS) assembler called Lazer, that achieves both scalability and memory efficiency by using partitioned de Bruijn graphs. By enhancing the memory-to-disk swapping and reducing the …

A Study On The Mental Health Of Women In The Csse Department Of California Polytechnic State University, Sophia Lao, Gabriella Garcia Nobili

Computer Science and Software Engineering

The goal of this paper is to explore the perceived effect that the Computer Science Curriculum has on the mental health of female students. To discover these effects we conducted 50 interviews over a period of several months with the female students of the Computer Science and Software Engineering (CSSE) department at California Polytechnic State University in San Luis Obispo. The total amount of Computer Science (CSC) majors at this institution is approximately 680, with 150 of them being female, so we were able to gather responses from 33.3% of the female CSC students from our interviews. It is worth …

Identifying Hourly Traffic Patterns With Python Deep Learning, Christopher L. Leavitt

Computer Engineering

This project was designed to explore and analyze the potential abilities and usefulness of applying machine learning models to data collected by parking sensors at a major metro shopping mall. By examining patterns in rates at which customer enter and exit parking garages on the campus of the Bellevue Collection shopping mall in Bellevue, Washington, a recurrent neural network will use data points from the previous hours will be trained to forecast future trends.

Grammar-Based Procedurally Generated Village Creation Tool, Kevin Matthew Graves

Computer Engineering

This project is a 3D village generator tool for Unity. It consists of three components: a building, mountain, and river generator. All of these generators use grammar-based procedural generation in order to create a unique and logical village and landscape each time the program is run.

Evaluating Projections And Developing Projection Models For Daily Fantasy Basketball, Eric C. Evangelista

Master's Theses

Daily fantasy sports (DFS) has grown in popularity with millions of participants throughout the world. However, studies have shown that most profits from DFS contests are won by only a small percentage of players. This thesis addresses the challenges faced by DFS participants by evaluating sources that provide player projections for NBA DFS contests and by developing machine learning models that produce competitive player projections.

External sources are evaluated by constructing daily lineups based on the projections offered and evaluating those lineups in the context of all potential lineups, as well as those submitted by participants in competitive FanDuel DFS …

Cs+Sociology: Global Inequality Lab 1, Elin Waring, Janet Michello

Open Educational Resources

These materials include background for the instructor and a lab that engages student in an analysis of global inequality while learning and using the R language (a programming language for statistics). Students obtain data on the US and two other countries (one more developed and one less developed).

Deep Morphological Neural Networks, Yucong Shen

Theses

Mathematical morphology is a theory and technique applied to collect features like geometric and topological structures in digital images. Determining suitable morphological operations and structuring elements for a give purpose is a cumbersome and time-consuming task. In this paper, morphological neural networks are proposed to address this problem. Serving as a non-linear feature extracting layers in deep learning frameworks, the efficiency of the proposed morphological layer is confirmed analytically and empirically. With a known target, a single-filter morphological layer learns the structuring element correctly, and an adaptive layer can automatically select appropriate morphological operations. For high level applications, the proposed …

Cs+Sociology: Global Inequality Lab 2, Elin Waring, Janet Michello

Open Educational Resources

These materials include background for the instructor and a lab that engages student in an analysis of global inequality while learning and using the R language (a programming language for statistics). Students ultimately write a function to access country level data from the CIA World Factbook.

Designing Single Guide Rnas For Crispr/Cas9, Neha Atul Bhagwat

Master's Projects

Researchers have been working towards development of tools to facilitate regular use genome engineering techniques. In recent years, the focus of these efforts has been the Clustered Regularly Interspaced Short Palindromic Repeats(CRISPR)/CRISPR associated(Cas) systems. These systems, while found naturally in bacteria and archaea as an immunity mechanism, can be used for genome engineering in eukaryotes.

There are three major computational challenges associated with the use of CRISPR/Cas9 in genome engineering for mammals - identification of CRISPR arrays, single guide RNA design and minimizing off-target effects. This project attempts to solve the problem of single guide RNA design using a novel …

Randition: Random Blockchain Partitioning For Write Throughput, David Nguyen

Master's Projects

This paper proposes to support dynamic runtime partitioning of Tendermint, which is an in-development state machine replication algorithm that uses the blockchain model to provide Byzantine-fault tolerance. We call this variation Randition. We incorporate recent research from blockchain consensus and replicated state machine partitioning to allow Randition users to partition their blockchain for improved write performance at the cost of some Byzantine fault tolerance. We conduct an experiment to compare the raw write throughput of Randition and Tendermint. Finally, we discuss the experiment results and discuss further improvements to Randition.

Machine Learning In Crop Classification Of Temporal Multispectral Satellite Image, Ravali Koppaka

Master's Projects

Recently, there has been a remarkable growth in Artificial Intelligence (AI) with

the development of efficient AI models and high-power computational resources for processing complex datasets. There has been a growing number of applications of machine learning in satellite remote sensing image data processing. In this work, machine learning methods were applied for crop classification of temporal multi- spectral satellite image to achieve better prediction of crop-wise area statistics. In India, agriculture has a huge impact on the national economy and most of the critical decisions are dependent on agricultural statistics. Sentinel-2 satellite image data for the Guntur district region …

Detecting Crispr Arrays Using Long-Short Term Memory Network, Shantanu Deshmukh

Master's Projects

CRISPR (Clustered Regularly Interspaced Short Palindromic Repeat) is a se- quence found in the DNA sequence of an organism. It provides provides immunity to the organism. Recently, it was found that the CRISPR-based immunity mechanism can be manipulated to perform genome editing. The problem is, it is hard to know the specificity of this system and in turn, making it highly specific is difficult. More re- search is required to improve this CRISPR-based genome editing. Detecting CRISPR arrays in the DNA sequence is the first step towards this research. In this work, a CRISPR array detection pipeline, CRISPRLstm, is proposed. …

Music Mood Classification Using Convolutional Neural Networks, Revanth Akella

Master's Projects

Grouping music into moods is useful as music is migrating from to online streaming services as it can help in recommendations. To establish the connection between music and mood we develop an end-to-end, open source approach for mood classification using lyrics. We develop a pipeline for tag extraction, lyric extraction, and establishing classification models for classifying music into moods. We investigate techniques to classify music into moods using lyrics and audio features. Using various natural language processing methods with machine learning and deep learning we perform a comparative study across different classification and mood models. The results infer that features …

Detection Of Sand Boils From Images Using Machine Learning Approaches, Aditi S. Kuchi

LSU New Orleans Theses and Dissertations

Levees provide protection for vast amounts of commercial and residential properties. However, these structures degrade over time, due to the impact of severe weather, sand boils, subsidence of land, seepage, etc. In this research, we focus on detecting sand boils. Sand boils occur when water under pressure wells up to the surface through a bed of sand. These make levees especially vulnerable. Object detection is a good approach to confirm the presence of sand boils from satellite or drone imagery, which can be utilized to assist in the automated levee monitoring methodology. Since sand boils have distinct features, applying object …

A Webrtc Video Chat Implementation Within The Yioop Search Engine, Yangcha Ho

Master's Projects

Web real-time communication (abbreviated as WebRTC) is one of the latest Web application technologies that allows voice, video, and data to work collectively in a browser without a need for third-party plugins or proprietary software installation. When two browsers from different locations communicate with each other, they must know how to locate each other,

bypass security and firewall protections, and transmit all multimedia communications in real time. This project not only illustrates how WebRTC technology works but also walks through a real example of video chat-style application. The application communicates between two remote users using WebSocket and the data encryption …

Poriferal Vision, Saketh Saxena

Master's Projects

Sponges provide nourishment as well as a habitat for various aquatic organisms. Anatomically, sponges are made up of soft tissue with a silica based exoskeleton which serves both as support and protection for the underlying tissue. The exoskeleton persists after the tissue decomposes, and microscopic parts of the exoskeleton break away to form spicules. Oceanographic studies have shown that the density of the sponge spicules is a good indicator of the sponge population in an area. This measure can be used to study sponge population dynamics over time. The spicule density is measured by imaging spicules from samples of water …

Using Computer Vision To Quantify Coral Reef Biodiversity, Niket Bhodia

Master's Projects

The preservation of the world’s oceans is crucial to human survival on this planet, yet we know too little to begin to understand anthropogenic impacts on marine life. This is especially true for coral reefs, which are the most diverse marine habitat per unit area (if not overall) as well as the most sensitive. To address this gap in knowledge, simple field devices called autonomous reef monitoring structures (ARMS) have been developed, which provide standardized samples of life from these complex ecosystems. ARMS have now become successful to the point that the amount of data collected through them has outstripped …

Predicting Off-Target Potential Of Crispr-Cas9 Single Guide Rna, Ishita Mathur

Master's Projects

With advancements in the field of genome engineering, researchers have come up with potential ways for site-specific gene editing. One of the methods uses the Clustered Regularly Interspaced Short Palindromic Repeats - CRISPR-Cas technology. It consists of a Cas9 nuclease and a single guide RNA (sgRNA) that cleaves the DNA at the intended target site. However, the target genome could contain multiple potential off-target sites and cleaving an off-target site can have deleterious effects in case of gene editing in humans.

Lab based assays have been developed to test the off-target effects of guide RNAs. However, it is not feasible …

Glovenor - Global Vectors For Node Representations, Shishir Kulkarni

Master's Projects

A graph is a very powerful abstract data type that can be used to model entities (nodes) and relationships (edges). Many real world networks like biological, computer and friendship networks can be represented as graphs. Graphs can be mined to extract interesting patterns and interactions between the participating entities. Recently, various Artificial Intelligence (AI) and Machine Learning (ML) techniques are used for this purpose. In order to do that, the nodes of a graph have to be represented as low dimensional feature vectors. Node embedding is the process of generating a �-dimensional feature vector corresponding to each node of a …

Tsar : A System For Defending Hate Speech Detection Models Against Adversaries, Brian Tuan Khieu

Master's Projects

Although current state-of-the-art hate speech detection models achieve praiseworthy results, these models have shown themselves to be vulnerable to attack. Easy to execute lexical manipulations such as the removal of whitespace from a given text create significant issues for word-based hate speech detection models. In this paper, we reproduce the results of five cutting edge models as well as four significant evasion schemes from prior work. Only a limited amount of evasion schemes that also maintain readability exists, and this works to our advantage in the recreation of the original data. Furthermore, we demonstrate that each lexical attack or evasion …

Benchmarking Optimization Algorithms For Capacitated Vehicle Routing Problems, Pratik Surana

Master's Projects

The Vehicle Routing Problem (VRP) originated in the 1950s when algorithms and mathematical approaches were applied to find solutions for routing vehicles. Since then, there has been extensive research in the field of VRPs to solve real-life problems. The process of generating an optimal routing schedule for a VRP is complex due to two reasons. First, VRP is considered to be an NP-Hard problem. Second, there are several constraints involved, such as the number of available vehicles, the vehicle capacities, time-windows for pickup or delivery etc.

The main goal for this project was to compare different optimization algorithms for solving …

Classification Of Humans Into Ayurvedic Prakruti Types Using Computer Vision, Gayatri Gadre

Master's Projects

Ayurveda, a 5000 years old Indian medical science, believes that the universe and hence humans are made up of five elements namely ether, fire, water, earth, and air. The three Doshas (Tridosha) Vata, Pitta, and Kapha originated from the combinations of these elements. Every person has a unique combination of Tridosha elements contributing to a person’s ‘Prakruti’. Prakruti governs the physiological and psychological tendencies in all living beings as well as the way they interact with the environment. This balance influences their physiological features like the texture and colour of skin, hair, eyes, length of fingers, the shape of the …

Chatbots With Personality Using Deep Learning, Susmit Gaikwad

Master's Projects

Natural Language Processing (NLP) requires the computational modelling of the complex relationships of the syntax and semantics of a language. While traditional machine learning methods are used to solve NLP problems, they cannot imitate the human ability for language comprehension. With the growth in deep learning, these complexities within NLP are easier to model, and be used to build many computer applications. A particular example of this is a chatbot, where a human user has a conversation with a computer program, that generates responses based on the user’s input. In this project, we study the methods used in building chatbots, …