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Full-Text Articles in Other Computer Sciences

Algorithmic Monocultures In Hiring, Rishi Bommasani, Sarah H. Bana, Kathleen A. Creel, Dan Saul Jurafsky, Percy Liang Jun 2026

Algorithmic Monocultures In Hiring, Rishi Bommasani, Sarah H. Bana, Kathleen A. Creel, Dan Saul Jurafsky, Percy Liang

Economics Faculty Articles and Research

Many employers screen job applicants with algorithms built by the same few algorithm vendors. We hypothesize that algorithmic monoculture leads to the same individuals and members of the same racial groups facing rejection. We acquire and analyze a novel dataset of 3 million applicants submitting 4 million applications where all the applications are screened by algorithms built by the same vendor. We find clear racial disparities in applicant outcomes. Of all applications submitted by Asian and Black applicants, 14.74% and 25.87% are submitted to positions that adversely impact Asian and Black applicants, respectively, according to U.S. employment discrimination standards. Individuals …


Parent Cultural Wealth: How Beliefs, Curriculum Familiarity, And Community Awareness Facilitate Home-Based Cs Conversations, Nicol Howard, Leiny Y. Garcia, Jean Ryoo, Julie Flapan, Michelle Choi, Paula Nazario, Wei Wei Jun 2026

Parent Cultural Wealth: How Beliefs, Curriculum Familiarity, And Community Awareness Facilitate Home-Based Cs Conversations, Nicol Howard, Leiny Y. Garcia, Jean Ryoo, Julie Flapan, Michelle Choi, Paula Nazario, Wei Wei

Mathematics, Physics, and Computer Science Faculty Articles and Research

Parents are critical influences on children's computer science (CS) pathways, yet families’ involvement remains understudied. Guided by parental involvement and community cultural wealth frameworks, this work-in-progress examined survey data from 53 parents representing families historically underrepresented in computing within California (71% women; 54% Hispanic/Latin/x/e). Findings revealed that CS school curriculum familiarity and awareness of CS community events significantly predicted parent-child CS conversations, while parent CS confidence and attitudes did not, suggesting that curriculum transparency and community connections can promote equitable involvement. Future work will integrate qualitative interviews to examine how families draw upon their cultural wealth.


Predicting And Decoding Allosteric Binding Sites Using Protein Language Models And Structure-Based Machine Learning: An Energy Landscape-Guided Explainable Ai Framework, Kamila Riedlová, Vít Skrhák, William G. Gatlin, Max Ludwick, Lucas Turano, Marian Novotný, David Hoksza, Gennady M. Verkhivker May 2026

Predicting And Decoding Allosteric Binding Sites Using Protein Language Models And Structure-Based Machine Learning: An Energy Landscape-Guided Explainable Ai Framework, Kamila Riedlová, Vít Skrhák, William G. Gatlin, Max Ludwick, Lucas Turano, Marian Novotný, David Hoksza, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

Computational prediction of allosteric binding sites in protein structures remains a persistent challenge, as these regulatory pockets evade detection by both sequence-based and structure-based algorithms. Both computational and physical origins of this predictive asymmetry remain insufficiently understood. In this study, we systematically examine the determinants of binding site predictability using a dual framework that integrates a fine-tuned protein language model and the structure-based method P2Rank as complementary tools probing a diverse data set of 453 human kinases, together with a physics-based interpretability layer derived from energy landscape frustration analysis. Both predictors exhibit a sharp and reproducible dichotomy on protein kinases, …


Designing Enhanced Nonlinearity In Plasmonic Devices With Epsilon-Near-Zero Films, Kevin Tran Le May 2026

Designing Enhanced Nonlinearity In Plasmonic Devices With Epsilon-Near-Zero Films, Kevin Tran Le

Electrical Engineering and Computer Science (MS) Theses

The growing demand for energy-efficient optical information processing motivates compact nonlinear photonic devices that can operate at low power. Silicon photonics is a mature platform for linear optical functions, but nonlinear operation remains challenging because of its weak Kerr response, two-photon absorption at telecommunication wavelengths, and limited compatibility with deeply subwavelength plasmonic confinement. This thesis computationally investigates epsilon-near-zero thin films integrated into plasmonic waveguide architectures as a route toward stronger light–matter interaction in compact nonlinear devices.

Two waveguide geometries are examined: a hybrid metal-insulator-metal plasmonic slab waveguide incorporating an ultrathin indium tin oxide epsilon-near-zero layer (5–50 nm), and a dielectric-loaded …


Spectral–Spatial Transformer With Multiscale Convolutional Attention For Hyperspectral Image Classification, Junde Chen, Wenzhao Li, Hesham El-Askary Sep 2025

Spectral–Spatial Transformer With Multiscale Convolutional Attention For Hyperspectral Image Classification, Junde Chen, Wenzhao Li, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

Hyperspectral image (HSI) classification plays a vital role in remote sensing by leveraging rich spectral and spatial information for accurate material recognition. However, existing methods, particularly Transformer-based approaches, still face challenges in effectively modeling multiscale spatial–spectral features, preserving local details, and maintaining robustness to noise. To mitigate these limitations, we propose TMCANet, a spectral–spatial Transformer with multiscale convolutional attention, designed to effectively leverage both local and global contextual dependencies for HSI classification. Our design is guided by three core strategies: first, a convolutional feature extraction module, consisting of four convolutional layers, to learn hierarchical spectral multiscale representations and enhance local …


Dynamic Mutational Profiling Of Binding Interactions And Allosteric Networks In Conformational Ensembles Of The Sars-Cov-2 Spike Protein Complexes With Classes Of Antibodies Targeting Cryptic Binding Sites: Confluence Of Binding And Allostery Determines Molecular Mechanisms And Hotspots Of Immune Escape, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker Aug 2025

Dynamic Mutational Profiling Of Binding Interactions And Allosteric Networks In Conformational Ensembles Of The Sars-Cov-2 Spike Protein Complexes With Classes Of Antibodies Targeting Cryptic Binding Sites: Confluence Of Binding And Allostery Determines Molecular Mechanisms And Hotspots Of Immune Escape, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

The ongoing evolution of SARS-CoV-2 variants has underscored the need to understand not only the structural basis of antibody recognition but also the dynamic and allosteric mechanisms that could underlie complexity of broad and escape-resistant neutralization. In this study, we employed a multi-scale approach integrating structural analysis, hierarchical molecular simulations, mutational scanning and network-based allosteric modeling to dissect how Class 4 antibodies (represented by S2X35, 25F9, and SA55) and Class 5 antibodies (represented by S2H97, WRAIR-2063 and WRAIR-2134) can modulate conformational behavior, binding energetics, allosteric interactions and immune escape patterns of the SARS-CoV-2 spike protein. Using hierarchical simulations of the …


Multiscale Modeling And Dynamic Mutational Profiling Of Binding Energetics And Immune Escape For Class I Antibodies With Sars-Cov-2 Spike Protein: Dissecting Mechanisms Of High Resistance To Viral Escape Against Emerging Variants, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker Jul 2025

Multiscale Modeling And Dynamic Mutational Profiling Of Binding Energetics And Immune Escape For Class I Antibodies With Sars-Cov-2 Spike Protein: Dissecting Mechanisms Of High Resistance To Viral Escape Against Emerging Variants, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

The rapid evolution of SARS-CoV-2 has underscored the need for a detailed understanding of antibody binding mechanisms to combat immune evasion by emerging variants. In this study, we investigated the interactions between Class I neutralizing antibodies—BD55-1205, BD-604, OMI-42, P5S-1H1, and P5S-2B10—and the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein using multiscale modeling, which combined molecular simulations with the ensemble-based mutational scanning of the binding interfaces and binding free energy computations. A central theme emerging from this work is that the unique binding strength and resilience to immune escape of the BD55-1205 antibody are determined by leveraging a broad epitope …


Advancements In Refreshable Braille Display Technology: A Comprehensive Survey, Maryam Etezad, Rajeev Joshi, Franceli L. Cibrian Jun 2025

Advancements In Refreshable Braille Display Technology: A Comprehensive Survey, Maryam Etezad, Rajeev Joshi, Franceli L. Cibrian

Engineering Faculty Articles and Research

This paper provides a comprehensive mapping literature review of the advancements in refreshable Braille display (RBD) technology, which employs dynamically movable pins or dots to render Braille characters for individuals with blindness and visual impairment. This literature review, which includes 96 papers, aims to summarize the current evidence on six distinct types of RBDs: piezoelectric, electromagnetic, electroactive polymer (EAP), pneumatic, shape memory alloy (SMA), and microfluidic technologies. For each type, we discuss the underlying mechanisms, alongside the current trends and research opportunities. This comparative analysis aims to inform the selection of appropriate RBD technology based on specific user needs and …


The Critical Plastocapillary Number For A Newtonian Liquid Filament Embedded Into A Viscoplastic Fluid, Mohammad Tanver Hossain, Wonsik Eom, Arjun Shah, Andrew Lowe, Douglas Fudge, Sameh H. Tawfick, Randy Ewoldt Jun 2025

The Critical Plastocapillary Number For A Newtonian Liquid Filament Embedded Into A Viscoplastic Fluid, Mohammad Tanver Hossain, Wonsik Eom, Arjun Shah, Andrew Lowe, Douglas Fudge, Sameh H. Tawfick, Randy Ewoldt

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The yield stress of a viscoplastic material can stabilize an embedded fluid tunnel against capillarity-induced breakup, enabling remarkable technologies such as embedded 3D printing of intricate, freeform, and small components. However, there is persistent disagreement in the published literature between the observed minimum stable diameter, 𝑑min, and the theoretical plastocapillary length 𝑝𝑐 = 2𝛤∕𝜎𝑦, with interfacial tension 𝛤 and bath yield stress 𝜎𝑦, leading to a prior hypothesis that the apparent surface tension 𝛤 is much smaller to enforce 𝑑min = 𝑝𝑐 . Here we introduce and experimentally test a new hypothesis that the critical diameter is set by the …


Tellings Of The Pacific Ocean: A Landscape-Based Approach For Multispecies Design And Hci, Maliheh Ghajargar Jun 2025

Tellings Of The Pacific Ocean: A Landscape-Based Approach For Multispecies Design And Hci, Maliheh Ghajargar

Engineering Faculty Articles and Research

Environmental disturbances induced by climate change have caused significant changes in our ecosystems and are threatening the health of our environments. As a response to this issue, a growing body of work has emerged in HCI and design, which seeks to foreground more-than-human stories in support of making more sustainable and just futures. This research contributes to this broad agenda by probing graphic novels as a multispecies storytelling method for design and HCI. Combining ideas from Anna Tsing’s adventures of landscape and from HCI and design’s use of sequential art (e.g., storyboards), we use landscape as the main protagonist of …


Optical Character Recognition For Early Handwriting Legibility Assessment, Franceli L. Cibrian, Kayla Anderson, Yingying 'Yuki' Chen, Lauren Min, Lizbeth Escobedo Jun 2025

Optical Character Recognition For Early Handwriting Legibility Assessment, Franceli L. Cibrian, Kayla Anderson, Yingying 'Yuki' Chen, Lauren Min, Lizbeth Escobedo

Engineering Faculty Articles and Research

Monitoring children’s handwriting, such as avoiding writing assignments, displaying uneven letter formation, or showing slow writing speed, can help identify developmental and academic issues early. Poor handwriting affects up to 34% of children, leading to academic and self-esteem challenges. Handwriting assessments, typically conducted by teachers, are often delayed due to workload and could be subjective and inconsistent. This paper explores the potential of Optical Character Recognition (OCR) technology to augment and ease handwriting assessments. Based on an evaluation of 10 OCR algorithms using 33 handwriting samples assessed by two experts, the research indicates that Pen to Print and Google are …


Integrative Computational Modeling Of Distinct Binding Mechanisms For Broadly Neutralizing Antibodies Targeting Sars-Cov-2 Spike Omicron Variants: Balance Of Evolutionary And Dynamic Adaptability In Shaping Molecular Determinants Of Immune Escape, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker May 2025

Integrative Computational Modeling Of Distinct Binding Mechanisms For Broadly Neutralizing Antibodies Targeting Sars-Cov-2 Spike Omicron Variants: Balance Of Evolutionary And Dynamic Adaptability In Shaping Molecular Determinants Of Immune Escape, Mohammed Alshahrani, Vedant Parikh, Brandon Foley, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

In this study, we conducted a comprehensive analysis of the interactions between the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein and four neutralizing antibodies—S309, S304, CYFN1006, and VIR-7229. Using integrative computational modeling that combined all-atom molecular dynamics (MD) simulations, mutational scanning, and MM-GBSA binding free energy calculations, we elucidated the structural, energetic, and dynamic determinants of antibody binding. Our findings reveal distinct dynamic binding mechanisms and evolutionary adaptation driving the broad neutralization effect of these antibodies. We show that S309 targets conserved residues near the ACE2 interface, leveraging synergistic van der Waals and electrostatic interactions, while S304 focuses on …


Real-World Implementation Of A Noninvasive, Ai-Augmented, Anemia-Screening Smartphone App And Personalization For Hemoglobin Level Self-Monitoring, Robert G. Mannino, Julie Sullivan, Jennifer K. Frediani, Paul George, Jeremy Whitson, James Tumlin, L. Andrew Lyon, Erika A. Tyburski, Wilbur A. Lam May 2025

Real-World Implementation Of A Noninvasive, Ai-Augmented, Anemia-Screening Smartphone App And Personalization For Hemoglobin Level Self-Monitoring, Robert G. Mannino, Julie Sullivan, Jennifer K. Frediani, Paul George, Jeremy Whitson, James Tumlin, L. Andrew Lyon, Erika A. Tyburski, Wilbur A. Lam

Engineering Faculty Articles and Research

Anemia, characterized by low blood hemoglobin (Hgb) levels, afflicts >2 billion individuals worldwide. Here, we report real-world data generated by a smartphone app that noninvasively screens for anemia using only “fingernail selfies.” App data for anemia screening were obtained from >1.4 million uses across the United States enabling geographic mapping of Hgb levels. Of those, 9,061 users also self-reported complete blood count Hgb levels for comparison, resulting in accuracy and performance that match gold standard laboratory testing and a sensitivity and specificity of 89% and 93%, respectively, when using an anemia cutoff of 12.5 g/dL. Geotagged data enabled construction of …


Addressing Equity Issues In Elementary Computer Science Education: Knowns, Unknowns, And Implications For Future Work, Mike Karlin, Yin-Chan Janet Liao, Swati Mehta, Afreen Iqbal, Mahya Minaiy, Minhye Son, Jessica Pandya Mar 2025

Addressing Equity Issues In Elementary Computer Science Education: Knowns, Unknowns, And Implications For Future Work, Mike Karlin, Yin-Chan Janet Liao, Swati Mehta, Afreen Iqbal, Mahya Minaiy, Minhye Son, Jessica Pandya

Journal of Computer Science Integration

In 2016, a national coalition of stakeholders released the K-12 computer science (CS) framework. In the time since, there has been an increased push at the local, state, and national level to integrate CS knowledge and skills into K-12 education. Despite this push, significant equity issues exist within the field. While growing research has been done on CS equity issues at the high school level, we know these equity gaps often begin to emerge in elementary school where less is known. Therefore, we conducted a systematic literature review to better understand and explore the elementary CS equity research landscape from …


Stochastic Gradient Descent-Based Inference For Dynamic Network Models With Attractors, Hancong Pan, Xiaojing Zhu, Cantay Caliskan, Dino P. Christenson, Konstantinos Spiliopoulos, Dylan Walker, Eric D. Kolaczyk Feb 2025

Stochastic Gradient Descent-Based Inference For Dynamic Network Models With Attractors, Hancong Pan, Xiaojing Zhu, Cantay Caliskan, Dino P. Christenson, Konstantinos Spiliopoulos, Dylan Walker, Eric D. Kolaczyk

Business Faculty Articles and Research

In Coevolving Latent Space Networks with Attractors (CLSNA) models, nodes in a latent space represent social actors, and edges indicate their dynamic interactions. Attractors are added at the latent level to capture the notion of attractive and repulsive forces between nodes, borrowing from dynamical systems theory. However, CLSNA reliance on MCMC estimation makes scaling difficult, and the requirement for nodes to be present throughout the study period limit practical applications. We address these issues by (i) introducing a Stochastic gradient descent (SGD) parameter estimation method, (ii) developing a novel approach for uncertainty quantification using SGD, and (iii) extending the model …


Feasibility And Acceptability Of The Mazi Umntanakho Digital Tool In South African Settings: A Qualitative Evaluation, Catherine E. Draper, Caylee J. Cook, Elizabeth A. Ankrah, Jesus A. Beltran, Franceli L. Cibrian, Kimberley D. Lakes, Hanna Mofid, Lucretia Williams, Gillian R. Hayes Jan 2025

Feasibility And Acceptability Of The Mazi Umntanakho Digital Tool In South African Settings: A Qualitative Evaluation, Catherine E. Draper, Caylee J. Cook, Elizabeth A. Ankrah, Jesus A. Beltran, Franceli L. Cibrian, Kimberley D. Lakes, Hanna Mofid, Lucretia Williams, Gillian R. Hayes

Engineering Faculty Articles and Research

To address the need for interventions targeting social emotional development and mental health of young children in South Africa, the Mazi Umntanakho (‘know your child’) digital tool was co-designed, and piloted with caregivers and 3–5-year-old children involved in home visiting programmes promoting early childhood development. The aim of this study was to qualitatively evaluate the feasibility and acceptability of this tool in four urban and four rural low-income communities, from the perspective of home visitors and caregivers. Focus groups were conducted with home visitors (n = 117) and caregivers (n = 72). Issues relating to the feasibility of …


Landslide Susceptibility Assessment Of The Wanzhou District: Merging Landslide Susceptibility Modelling (Lsm) With Insar-Derived Ground Deformation Map, Chao Zhou, Lulu Gan, Ying Cao, Yue Wang, Samuele Segoni, Xuguo Shi, Mahdi Motagh, Ramesh P. Singh Jan 2025

Landslide Susceptibility Assessment Of The Wanzhou District: Merging Landslide Susceptibility Modelling (Lsm) With Insar-Derived Ground Deformation Map, Chao Zhou, Lulu Gan, Ying Cao, Yue Wang, Samuele Segoni, Xuguo Shi, Mahdi Motagh, Ramesh P. Singh

Mathematics, Physics, and Computer Science Faculty Articles and Research

The prevalent catalog-based Landslide Susceptibility Modelling (LSM) operates under the assumption that future landslide occurrences mirror past and current patterns. Due to growing urban expansion and climate change, certain landslides follow new patterns of occurrence, disrupting the foundational assumption of catalog-based LSM and leading to constraints in the effectiveness of traditional susceptibility maps. Here, to address this problem, we proposed a method to produce more accurate and dynamic landslide susceptibility maps by coupling advanced Ensemble Machine Learning (EML) and Multi-Temporal Interferometric SAR (MT-InSAR). The Wanzhou District in Three Gorges Reservoir area of China is considered as the test site. The …


Dancetag: Using Sensors To Improve Feedback Given To Dance Students, Yanelly Mego, Franceli L. Cibrian Dec 2024

Dancetag: Using Sensors To Improve Feedback Given To Dance Students, Yanelly Mego, Franceli L. Cibrian

Student Scholar Symposium Abstracts and Posters

The structure of dance classrooms has remained largely unchanged for years, with minimal integration of technology to enhance teaching. This has motivated our research project, which aims to capture dance movements using wearable sensors and translate the information into meaningful visualizations to help dancers improve their skills. As the first step in addressing the research question—can data from commercial wearables differentiate between the movements of dancers and non-dancers?—we developed DANCETAG (Data Analytics and Notation with Captured Event Tagging), a platform designed for data collection and movement annotation. We utilized Sony’s Mocopi sensors, a motion capture system with six sensors attached …


Time Series Decomposition Of Land Surface Temperature For Long-Term Trend Forecasting And Impact On Nesting Sea Turtle Habitats In The Arabian Gulf, Sachi Perera, Rommel H. Maneja, Mohamed Allali, Cyril Rakovski, Erik Linstead, Daniele Struppa, Ali Qasem, Hesham El-Askary Dec 2024

Time Series Decomposition Of Land Surface Temperature For Long-Term Trend Forecasting And Impact On Nesting Sea Turtle Habitats In The Arabian Gulf, Sachi Perera, Rommel H. Maneja, Mohamed Allali, Cyril Rakovski, Erik Linstead, Daniele Struppa, Ali Qasem, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

Improving land surface temperature (LST) modeling is vital for mitigating climate change effects on various ecosystems and marine habitats such as important sea turtle habitats. Over the past decade, extreme temperatures have likely significantly affected nesting sea turtle habitats in the Arabian Gulf, with predominantly female hatchlings creating an imbalance in the sex ratio. Such shifts have profound implications for these habitats’ long-term survival and conservation management. This study leverages statistical machine learning models to measure ongoing temporal variations in LST. We break down the LST time series into trend, seasonal, and noise components using classical decomposition methods like X11, …


Bibliography For "3-D Printing Display", Isabella Piechota, Arianna Tillman, Annikah Carpio Nov 2024

Bibliography For "3-D Printing Display", Isabella Piechota, Arianna Tillman, Annikah Carpio

Library Displays and Bibliographies

A bibliography created to support a display about 3D printing at the Leatherby Libraries during November 2024-February 2025 at the Leatherby Libraries at Chapman University.


Assessment And Prediction Of Meteorological Drought Using Machine Learning Algorithms And Climate Data, Khalid En-Nagre, Mourad Aqnouy, Ayoub Ouarka, Syed Ali Asad Naqvi, Ismail Bouizrou, Jamal Eddine Stitou El Messari, Aqil Tariq, Walid Soufan, Wenzhao Li, Hesham El-Askary Jun 2024

Assessment And Prediction Of Meteorological Drought Using Machine Learning Algorithms And Climate Data, Khalid En-Nagre, Mourad Aqnouy, Ayoub Ouarka, Syed Ali Asad Naqvi, Ismail Bouizrou, Jamal Eddine Stitou El Messari, Aqil Tariq, Walid Soufan, Wenzhao Li, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

Monitoring drought in semi-arid regions due to climate change is of paramount importance. This study, conducted in Morocco’s Upper Drâa Basin (UDB), analyzed data spanning from 1980 to 2019, focusing on the calculation of drought indices, specifically the Standardized Precipitation Index (SPI) and the Standardized Precipitation Evapotranspiration Index (SPEI) at multiple timescales (1, 3, 9, 12 months). Trends were assessed using statistical methods such as the Mann-Kendall test and the Sen’s Slope estimator. Four significant machine learning (ML) algorithms, including Random Forest, Voting Regressor, AdaBoost Regressor, and K-Nearest Neighbors Regressor, were evaluated to predict the SPEI values for both three …


Mixed Uncertainty Analysis On Pumping By Peristaltic Hearts Using Dempster-Shafer Theory, Yanyan He, Nicholas A. Battista, Lindsay D. Waldrop Jun 2024

Mixed Uncertainty Analysis On Pumping By Peristaltic Hearts Using Dempster-Shafer Theory, Yanyan He, Nicholas A. Battista, Lindsay D. Waldrop

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

In this paper, we introduce the numerical strategy for mixed uncertainty propagation based on probability and Dempster–Shafer theories, and apply it to the computational model of peristalsis in a heart-pumping system. Specifically, the stochastic uncertainty in the system is represented with random variables while epistemic uncertainty is represented using non-probabilistic uncertain variables with belief functions. The mixed uncertainty is propagated through the system, resulting in the uncertainty in the chosen quantities of interest (QoI, such as flow volume, cost of transport and work). With the introduced numerical method, the uncertainty in the statistics of QoIs will be represented using belief …


Toward Intuitive 3d Interactions In Virtual Reality: A Deep Learning- Based Dual-Hand Gesture Recognition Approach, Trudi Di Qi, Franceli L. Cibrian, Meghna Raswan, Tyler Kay, Hector M. Camarillo-Abad, Yuxin Wen May 2024

Toward Intuitive 3d Interactions In Virtual Reality: A Deep Learning- Based Dual-Hand Gesture Recognition Approach, Trudi Di Qi, Franceli L. Cibrian, Meghna Raswan, Tyler Kay, Hector M. Camarillo-Abad, Yuxin Wen

Engineering Faculty Articles and Research

Dual-hand gesture recognition is crucial for intuitive 3D interactions in virtual reality (VR), allowing the user to interact with virtual objects naturally through gestures using both handheld controllers. While deep learning and sensor-based technology have proven effective in recognizing single-hand gestures for 3D interactions, research on dual-hand gesture recognition for VR interactions is still underexplored. In this work, we introduce CWT-CNN-TCN, a novel deep learning model that combines a 2D Convolution Neural Network (CNN) with Continuous Wavelet Transformation (CWT) and a Temporal Convolution Network (TCN). This model can simultaneously extract features from the time-frequency domain and capture long-term dependencies using …


Virtual Pair Programming And Online Oral Exams: Effects On Social Interaction, Performance, And Academic Integrity In A Remote Computer Programming Course, M. V. Lubarda, A. M. Phan, C. Schurgers, N. Delson, M. Ghazinejad, S. Baghdadchi, M. Minnes, Minju Kim, C. Pilegard, J. Relaford-Doyle, C. L. Sandoval, H. Qi May 2024

Virtual Pair Programming And Online Oral Exams: Effects On Social Interaction, Performance, And Academic Integrity In A Remote Computer Programming Course, M. V. Lubarda, A. M. Phan, C. Schurgers, N. Delson, M. Ghazinejad, S. Baghdadchi, M. Minnes, Minju Kim, C. Pilegard, J. Relaford-Doyle, C. L. Sandoval, H. Qi

Psychology Faculty Articles and Research

Background and context

Pair programming and oral exams were deployed in tandem in a remote undergraduate computer programming course to promote social interaction and enhance learning.

Objectives

We investigate their impact on social interactions, sense of connection, academic performance, and academic integrity within a virtual learning environment, and explore the dynamics of student collaboration in the context of voluntary pair programming.

Method

Students’ coding activities, pairing preferences, and performance were survey responses were recorded and analyized.

Findings

First and second year students were more likely to participate in virtual pair programming than their more senior classmates. Willingness to pair program …


Dancetag: Using Sensors To Improve Feedback Given To Dance Students, Yanelly Mego May 2024

Dancetag: Using Sensors To Improve Feedback Given To Dance Students, Yanelly Mego

Student Scholar Symposium Abstracts and Posters

The structure of dance classrooms has remained unchanged for several years. Very little, if any, technology has been incorporated to improve the quality of teaching. This has motivated our research project, whose goal is to capture dance movements with wearable sensors, to develop DANCETAG (Data Analytics and Notation with Captured Event Tagging). This is a platform that allows the gathering of data captured by Sony’s Mocopi sensors and annotating them with the dancer's movements. The Mocopi sensors make up a motion capture system. It is comprised of six small, round sensors that can be attached to velcro straps and clips. …


Exploring Binding Pockets In The Conformational States Of The Sars-Cov-2 Spike Trimers For The Screening Of Allosteric Inhibitors Using Molecular Simulations And Ensemble-Based Ligand Docking, Grace Gupta, Gennady M. Verkhivker May 2024

Exploring Binding Pockets In The Conformational States Of The Sars-Cov-2 Spike Trimers For The Screening Of Allosteric Inhibitors Using Molecular Simulations And Ensemble-Based Ligand Docking, Grace Gupta, Gennady M. Verkhivker

Mathematics, Physics, and Computer Science Faculty Articles and Research

Understanding mechanisms of allosteric regulation remains elusive for the SARS-CoV-2 spike protein, despite the increasing interest and effort in discovering allosteric inhibitors of the viral activity and interactions with the host receptor ACE2. The challenges of discovering allosteric modulators of the SARS-CoV-2 spike proteins are associated with the diversity of cryptic allosteric sites and complex molecular mechanisms that can be employed by allosteric ligands, including the alteration of the conformational equilibrium of spike protein and preferential stabilization of specific functional states. In the current study, we combine conformational dynamics analysis of distinct forms of the full-length spike protein trimers and …


Predicting Ffar4 Agonists Using Structure-Based Machine Learning Approach Based On Molecular Fingerprints, Zaid Anis Sherwani, Syeda Sumayya Tariq, Mamona Mushtaq, Ali Raza Siddiqui, Mohammad Nur-E-Alam, Aftab Ahmed, Zaheer Ul-Haq Apr 2024

Predicting Ffar4 Agonists Using Structure-Based Machine Learning Approach Based On Molecular Fingerprints, Zaid Anis Sherwani, Syeda Sumayya Tariq, Mamona Mushtaq, Ali Raza Siddiqui, Mohammad Nur-E-Alam, Aftab Ahmed, Zaheer Ul-Haq

Pharmacy Faculty Articles and Research

Free Fatty Acid Receptor 4 (FFAR4), a G-protein-coupled receptor, is responsible for triggering intracellular signaling pathways that regulate various physiological processes. FFAR4 agonists are associated with enhancing insulin release and mitigating the atherogenic, obesogenic, pro-carcinogenic, and pro-diabetogenic effects, normally associated with the free fatty acids bound to FFAR4. In this research, molecular structure-based machine-learning techniques were employed to evaluate compounds as potential agonists for FFAR4. Molecular structures were encoded into bit arrays, serving as molecular fingerprints, which were subsequently analyzed using the Bayesian network algorithm to identify patterns for screening the data. The shortlisted hits obtained via machine learning protocols …


Cardiogpt: An Ecg Interpretation Generation Model, Guohua Fu, Jianwei Zheng, Islam Abudayyeh, Chizobam Ani, Cyril Rakovski, Louis Ehwerhemuepha, Hongxia Lu, Yongjuan Guo, Shenglin Liu, Huimin Chu, Bing Yang Apr 2024

Cardiogpt: An Ecg Interpretation Generation Model, Guohua Fu, Jianwei Zheng, Islam Abudayyeh, Chizobam Ani, Cyril Rakovski, Louis Ehwerhemuepha, Hongxia Lu, Yongjuan Guo, Shenglin Liu, Huimin Chu, Bing Yang

Mathematics, Physics, and Computer Science Faculty Articles and Research

Numerous supervised learning models aimed at classifying 12-lead electrocardiograms into different groups have shown impressive performance by utilizing deep learning algorithms. However, few studies are dedicated to applying the Generative Pre-trained Transformer (GPT) model in interpreting electrocardiogram (ECG) using natural language. Thus, we are pioneering the exploration of this uncharted territory by employing the CardioGPT model to tackle this challenge. We used a dataset of ECGs (standard 10s, 12-channel format) from adult patients, with 60 distinct rhythms or conduction abnormalities annotated by board-certified, actively practicing cardiologists. The ECGs were collected from The First Affiliated Hospital of Ningbo University and Shanghai …


Nowcasting Heavy Rainfall With Convolutional Long Short-Term Memory Networks: A Pixelwise Modeling Approach, Yi Victor Wang, Seung Hee Kim, Geunsu Lyu, Choeng-Lyong Lee, Soorok Ryu, Gyuwon Lee, Ki-Hong Min, Menas C. Kafatos Apr 2024

Nowcasting Heavy Rainfall With Convolutional Long Short-Term Memory Networks: A Pixelwise Modeling Approach, Yi Victor Wang, Seung Hee Kim, Geunsu Lyu, Choeng-Lyong Lee, Soorok Ryu, Gyuwon Lee, Ki-Hong Min, Menas C. Kafatos

Institute for ECHO Articles and Research

The recent decades have seen an increasing academic interest in leveraging machine learning approaches to nowcast, or forecast in a highly short-term manner, precipitation at a high resolution, given the limitations of the traditional numerical weather prediction models on this task. To capture the spatiotemporal associations of data on input variables, a deep learning (DL) architecture with the combination of a convolutional neural network and a recurrent neural network can be an ideal design for nowcasting rainfall. In this study, a long short-term memory (LSTM) modeling structure is proposed with convolutional operations on input variables. To resolve the issue of …


Evaluating Future Water Availability In Texas Through The Lens Of A Data-Driven Approach Leveraged With Cmip6 General Circulation Models, Wenzhao Li, Dongfeng Li, Hesham El-Askary, Joshua B. Fisher, Zheng N. Fang Feb 2024

Evaluating Future Water Availability In Texas Through The Lens Of A Data-Driven Approach Leveraged With Cmip6 General Circulation Models, Wenzhao Li, Dongfeng Li, Hesham El-Askary, Joshua B. Fisher, Zheng N. Fang

Mathematics, Physics, and Computer Science Faculty Articles and Research

Climate change is escalating the frequency and intensity of extreme precipitation events, significantly influencing the spatial and temporal distributions of water resources. This is particularly evident in Texas, a rapidly growing state with a pronounced west-east gradient in water supply. This study utilizes Coupled Model Intercomparison Project Phase 6 (CMIP6) data and data-driven methodology to improve projections of Texas's future water resources, focusing on actual evapotranspiration (AET) and water availability through enhanced Multi-Model Ensembles. The results reveal that the data-driven model significantly outperforms the CMIP5 and CMIP6 models across all skill metrics, underscoring the potential of data-driven methodologies in advancing …