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Articles 331 - 360 of 646
Full-Text Articles in OS and Networks
Approximate Owl-Reasoning With Screech, Tuvshintur Tserendorj, Sebastian Rudolph, Markus Krotzsch, Pascal Hitzler
Approximate Owl-Reasoning With Screech, Tuvshintur Tserendorj, Sebastian Rudolph, Markus Krotzsch, Pascal Hitzler
Computer Science and Engineering Faculty Publications
Applications of expressive ontology reasoning for the Semantic Web require scalable algorithms for deducing implicit knowledge from explicitly given knowledge bases. Besides the development of more effi- cient such algorithms, awareness is rising that approximate reasoning solutions will be helpful and needed for certain application domains. In this paper, we present a comprehensive overview of the Screech approach to approximate reasoning with OWL ontologies, which is based on the KAON2 algorithms, facilitating a compilation of OWL DL TBoxes into Datalog, which is tractable in terms of data complexity. We present three different instantiations of the Screech approach, and report on …
Collaborative Ro1 With Ncbo Semantics And Services Enabled Problem Solving Environment For Trypanosoma Cruzi, Amit P. Sheth, Rick Tarleton, Prashant Doshi, Mark Musen, Natasha Noy, Satya S. Sahoo, Daniel B. Weatherly
Collaborative Ro1 With Ncbo Semantics And Services Enabled Problem Solving Environment For Trypanosoma Cruzi, Amit P. Sheth, Rick Tarleton, Prashant Doshi, Mark Musen, Natasha Noy, Satya S. Sahoo, Daniel B. Weatherly
Kno.e.sis Publications
No abstract provided.
Semantic Sensor Web, Amit P. Sheth, Satya S. Sahoo
Semantic Sensor Web, Amit P. Sheth, Satya S. Sahoo
Kno.e.sis Publications
Sensors are distributed across the globe leading to an avalanche of data about our environment. It is possible today to utilize networks of sensors to detect and identify a multitude of observations, from simple phenomena to complex events and situations. The lack of integration and communication between these networks, however, often isolates important data streams and intensifies the existing problem of too much data and not enough knowledge. With a view to addressing this problem, the semantic sensor Web (SSW) proposes that sensor data be annotated with semantic metadata that will both increase interoperability and provide contextual information essential for …
Semantic Provenance For Escience: Managing The Deluge Of Scientific Data, Satya S. Sahoo, Amit P. Sheth, Cory Andrew Henson
Semantic Provenance For Escience: Managing The Deluge Of Scientific Data, Satya S. Sahoo, Amit P. Sheth, Cory Andrew Henson
Kno.e.sis Publications
Provenance information in eScience is metadata that's critical to effectively manage the exponentially increasing volumes of scientific data from industrial-scale experiment protocols. Semantic provenance, based on domain-specific provenance ontologies, lets software applications unambiguously interpret data in the correct context. The semantic provenance framework for eScience data comprises expressive provenance information and domain-specific provenance ontologies and applies this information to data management. The authors' "two degrees of separation" approach advocates the creation of high-quality provenance information using specialized services. In contrast to workflow engines generating provenance information as a core functionality, the specialized provenance services are integrated into a scientific workflow …
Learning Expressive Ontologies, Johanna Volker, Peter Haase, Pascal Hitzler
Learning Expressive Ontologies, Johanna Volker, Peter Haase, Pascal Hitzler
Computer Science and Engineering Faculty Publications
No abstract provided.
Hrests: An Html Microformat For Describing Restful Web Services, Jacek Kopecky, Karthik Gomadam, Tomas Vitvar
Hrests: An Html Microformat For Describing Restful Web Services, Jacek Kopecky, Karthik Gomadam, Tomas Vitvar
Kno.e.sis Publications
The Web 2.0 wave brings, among other aspects, the Programmable Web: increasing numbers of Web sites provide machine-oriented APIs and Web services. However, most APIs are only described with text in HTML documents. The lack of machine-readable API descriptions affects the feasibility of tool support for developers who use these services. We propose a microformat called hRESTS (HTML for RESTful Services) for machine-readable descriptions of Web APIs, backed by a simple service model. The hRESTS microformat describes main aspects of services, such as operations, inputs and outputs. We also present two extensions of hRESTS: SA-REST, which captures the facets of …
Joint Extraction Of Compound Entities And Relationships From Biomedical Literature, Cartic Ramakrishnan, Pablo N. Mendes, Rodrigo A.T.S. De Gama, Guilherme C.N. Ferreira, Amit P. Sheth
Joint Extraction Of Compound Entities And Relationships From Biomedical Literature, Cartic Ramakrishnan, Pablo N. Mendes, Rodrigo A.T.S. De Gama, Guilherme C.N. Ferreira, Amit P. Sheth
Kno.e.sis Publications
In this paper we identify some limitations of contemporary information extraction mechanisms in the context of biomedical literature. We present an extraction mechanism that generates structured representations of textual content. Our extraction mechanism achieves this by extracting compound entities, and relationships between them, occuring in text. A detailed evaluation of the relationship and compound entities extracted is presented. Our results show over 62% average precision across 8 relationship types tested with over 82% average precision for compound entity identification1.
Targeted Content Delivery For Social Media Content, Meenakshi Nagarajan, Kamal Baid, Amit P. Sheth, Shaojun Wang
Targeted Content Delivery For Social Media Content, Meenakshi Nagarajan, Kamal Baid, Amit P. Sheth, Shaojun Wang
Kno.e.sis Publications
Spotting contextually relevant keywords is fundamental to effective content suggestions on the Web. In this regard, misspellings, entity variations and off-topic discussions in content from Social Media pose unique challenges. Here, we present an algorithm that assists content delivery systems by identifying contextually relevant keywords and eliminating off-topic keywords. A preliminary user study over data from MySpace and Facebook clearly suggests the usefulness of our work in delivering more targeted content suggestions.
Traveling The Semantic Web Through Space, Theme And Time, Amit P. Sheth, Matthew Perry
Traveling The Semantic Web Through Space, Theme And Time, Amit P. Sheth, Matthew Perry
Kno.e.sis Publications
In this installment of Semantics and Services, we further develop the idea of spatial, temporal, and thematic (STT) processing of semantic Web data and describe the Web infrastructure needed to support it. Starting from Ramesh Jain's vision of the EventWeb as a view of what's possible with a Web that better accommodates all three dimensions of event-related information (thematic, spatial, and temporal), we outline the architecture needed to support it and current research that aims to realize it.
A General Boosting Method And Its Application To Learning Ranking Functions For Web Search, Zhaohui Zheng, Hongyuan Zha, Tong Zhang, Olivier Chapelle, Keke Chen, Gordon Sun
A General Boosting Method And Its Application To Learning Ranking Functions For Web Search, Zhaohui Zheng, Hongyuan Zha, Tong Zhang, Olivier Chapelle, Keke Chen, Gordon Sun
Kno.e.sis Publications
We present a general boosting method extending functional gradient boosting to optimize complex loss functions that are encountered in many machine learning problems. Our approach is based on optimization of quadratic upper bounds of the loss functions which allows us to present a rigorous convergence analysis of the algorithm. More importantly, this general framework enables us to use a standard regression base learner such as decision trees for fitting any loss function. We illustrate an application of the proposed method in learning ranking functions for Web search by combining both preference data and labeled data for training. We present experimental …
Video On The Semantic Sensor Web, Cory Andrew Henson, Amit P. Sheth, Prateek Jain, Josh Pschorr, Terry Rapoch
Video On The Semantic Sensor Web, Cory Andrew Henson, Amit P. Sheth, Prateek Jain, Josh Pschorr, Terry Rapoch
Kno.e.sis Publications
Millions of sensors around the globe currently collect avalanches of data about our world. The rapid development and deployment of sensor technology is intensifying the existing problem of too much data and not enough knowledge. With a view to alleviating this glut, we propose that sensor data, especially video sensor data, can be annotated with semantic metadata to provide contextual information about videos on the Web. In particular, we present an approach to annotating video sensor data with spatial, temporal, and thematic semantic metadata. This technique builds on current standardization efforts within the W3C and Open Geospatial Consortium (OGC) and …
Towards Tractable Local Closed World Reasoning For The Semantic Web, Matthias Knorr, Jose Julio Alferes, Pascal Hitzler
Towards Tractable Local Closed World Reasoning For The Semantic Web, Matthias Knorr, Jose Julio Alferes, Pascal Hitzler
Computer Science and Engineering Faculty Publications
Recently, the logics of minimal knowledge and negation as failure MKNF [12] was used to introduce hybrid MKNF knowledge bases [14], a powerful formalism for combining open and closed world reasoning for the Semantic Web. We present an extension based on a new three-valued framework including an alternating fixpoint, the well-founded MKNF model. This approach, the well-founded MKNF semantics, derives its name from the very close relation to the corresponding semantics known from logic programming. We show that the well-founded MKNF model is the least model among all (three-valued) MKNF models, thus soundly approximating also the two-valued MKNF models from …
Semantic Web For Health Care And Biomedical Informatics, Amit P. Sheth
Semantic Web For Health Care And Biomedical Informatics, Amit P. Sheth
Kno.e.sis Publications
No abstract provided.
Leveraging Semantic Web Techniques To Gain Situational Awareness, Amit P. Sheth
Leveraging Semantic Web Techniques To Gain Situational Awareness, Amit P. Sheth
Kno.e.sis Publications
No abstract provided.
Conjunctive Queries For A Tractable Fragment Of Owl 1.1, Markus Krotzsch, Sebastian Rudolph, Pascal Hitzler
Conjunctive Queries For A Tractable Fragment Of Owl 1.1, Markus Krotzsch, Sebastian Rudolph, Pascal Hitzler
Computer Science and Engineering Faculty Publications
Despite the success of the Web Ontology Language OWL, the development of expressive means for querying OWL knowledge bases is still an open issue. In this paper, we investigate how a very natural and desirable form of queries-namely conjunctive ones-can be used in conjunction with OWL such that one of the major design criteria of the latter-namely decidability-can be retained. More precisely, we show that querying the tractable fragment EL++ of OWL 1.1 is decidable. We also provide a complexity analysis and show that querying unrestricted EL++ is undecidable.
Can Semantic Web Techniques Empower Comprehension And Projection In Cyber Situational Awareness?, Amit P. Sheth
Can Semantic Web Techniques Empower Comprehension And Projection In Cyber Situational Awareness?, Amit P. Sheth
Kno.e.sis Publications
No abstract provided.
Semantic Convergence Of Wikipedia Articles, Christopher J. Thomas, Amit P. Sheth
Semantic Convergence Of Wikipedia Articles, Christopher J. Thomas, Amit P. Sheth
Kno.e.sis Publications
Social networking, distributed problem solving and human computation have gained high visibility. Wikipedia is a well established service that incorporates aspects of these three fields of research. For this reason it is a good object of study for determining quality of solutions in a social setting that is open, completely distributed, bottom up and not peer reviewed by certified experts. In particular, this paper aims at identifying semantic convergence of Wikipedia articles; the notion that the content of an article stays stable regardless of continuing edits. This could lead to an automatic recommendation of good article tags but also add …
Supporting Complex Thematic, Spatial And Temporal Queries Over Semantic Web Data, Matthew Perry, Amit P. Sheth, Farshad Hakimpour, Prateek Jain
Supporting Complex Thematic, Spatial And Temporal Queries Over Semantic Web Data, Matthew Perry, Amit P. Sheth, Farshad Hakimpour, Prateek Jain
Kno.e.sis Publications
Spatial and temporal data are critical components in many applications. This is especially true in analytical domains such as national security and criminal investigation. Often, the analytical process requires uncovering and analyzing complex thematic relationships between disparate people, places and events. Fundamentally new query operators based on the graph structure of Semantic Web data models, such as semantic associations, are proving useful for this purpose. However, these analysis mechanisms are primarily intended for thematic relationships. In this paper, we describe a framework built around the RDF metadata model for analysis of thematic, spatial and temporal relationships between named entities. We …
A Multi-Objective Genetic Algorithm That Employs A Hybrid Approach For Isolating Codon Usage Bias Indicative Of Translational Efficiency, Douglas W. Raiford, Dan E. Krane, Travis E. Doom, Michael L. Raymer
A Multi-Objective Genetic Algorithm That Employs A Hybrid Approach For Isolating Codon Usage Bias Indicative Of Translational Efficiency, Douglas W. Raiford, Dan E. Krane, Travis E. Doom, Michael L. Raymer
Kno.e.sis Publications
Isolation of translational efficiency bias can have important applications in gene expression prediction and heterologous protein production. In some genomes the presence of a high GC(AT)-content bias can confound the isolation of translational efficiency bias. In other organisms translational efficiency bias is weak making it difficult to isolate. Described here is a multi-objective genetic algorithm that improves the isolation of translational efficiency bias in Streptomyces coelicolor A3(2) and Pseudomonas aeruginosa PAO1, two organisms shown to have high GC-content and weak translational efficiency bias.
Swashup: Situational Web Applications Mashups, E. Michael Maximilien, Ajith Harshana Ranabahu, Stefan Tai
Swashup: Situational Web Applications Mashups, E. Michael Maximilien, Ajith Harshana Ranabahu, Stefan Tai
Kno.e.sis Publications
Distributed programming has shifted from private networks to the Internet using heterogeneous Web APIs. This enables the creation of situational applications of composed services exposing user interfaces, i.e., mashups. However, this programmable Web lacks unified models that can facilitate mashup creation, reuse, and deployments. This poster demonstrates a platform to facilitate Web 2.0 mashups.
A Proposed Statistical Protocol For The Analysis Of Metabolic Toxicological Data Derived From Nmr Spectroscopy, Benjamin J. Kelly, Paul E. Anderson, Nicholas V. Reo, Nicholas J. Delraso, Travis E. Doom, Michael L. Raymer
A Proposed Statistical Protocol For The Analysis Of Metabolic Toxicological Data Derived From Nmr Spectroscopy, Benjamin J. Kelly, Paul E. Anderson, Nicholas V. Reo, Nicholas J. Delraso, Travis E. Doom, Michael L. Raymer
Kno.e.sis Publications
Nuclear magnetic resonance (NMR) spectroscopy is a non-invasive method of acquiring a metabolic profile from biofluids. This metabolic information may provide keys to the early detection of exposure to a toxin. A typical NMR toxicology data set has low sample size and high dimensionality. Thus, traditional pattern recognition techniques are not always feasible. In this paper, we evaluate several common alternatives for isolating these biomarkers. The fold test, unpaired t-test, and paired t-test were performed on an NMR-derived toxicological data set and results were compared. The paired t-test method was preferred, due to its ability to attribute statistical significance, to …
Realizing The Relationship Web: Morphing Information Access On The Web From Today's Document- And Entity-Centric Paradigm To A Relationship-Centric Paradigm, Amit P. Sheth
Kno.e.sis Publications
No abstract provided.
Description Logic Programs: Normal Forms, Pascal Hitzler, Andreas Eberhart
Description Logic Programs: Normal Forms, Pascal Hitzler, Andreas Eberhart
Computer Science and Engineering Faculty Publications
The relationship and possible interplay between different knowledge representation and reasoning paradigms is a fundamental topic in artificial intelligence. For expressive knowledge representation for the Semantic Web, two different paradigms - namely Description Logics (DLs) and Logic Programming - are the two most successful approaches. A study of their exact relationships is thus paramount. An intersection of OWL with (function-free non-disjunctive) Datalog, called DLP (for Description Logic Programs), has been described in [1,2]. We provide normal forms for DLP in Description Logic syntax and in Datalog syntax, thus providing a bridge for the researcher and user who is familiar with …
Comparing Disjunctive Well-Founded Semantics, Matthias Knorr, Pascal Hitzler
Comparing Disjunctive Well-Founded Semantics, Matthias Knorr, Pascal Hitzler
Computer Science and Engineering Faculty Publications
While the stable model semantics, in the form of Answer Set Programming, has become a successful semantics for disjunctive logic programs, a corresponding satisfactory extension of the well-founded semantics to disjunctive programs remains to be found. The many current proposals for such an extension are so diverse, that even a systematic comparison between them is a challenging task. In order to aid the quest for suitable disjunctive well-founded semantics, we present a systematic approach to a comparison based on level mappings, a recently introduced framework for characterizing logic programming semantics, which was quite successfully used for comparing the major semantics …
Any-World Access To Owl From Prolog, Tobias Matzner, Pascal Hitzler
Any-World Access To Owl From Prolog, Tobias Matzner, Pascal Hitzler
Computer Science and Engineering Faculty Publications
The W3C standard OWL provides a decidable language for representing ontologies. While its use is rapidly spreading, efforts are being made by researchers worldwide to augment OWL with additional expressive features or by interlacing it with other forms of knowledge representation, in order to make it applicable for even further purposes. In this paper, we integrate OWL with one of the most successful and most widely used forms of knowledge representation, namely Prolog, and present a hybrid approach which layers Prolog on top of OWL in such a way that the open-world semantics of OWL becomes directly accessible within the …
The Programmable Web: Agile, Social, And Grassroots Computing, E. Michael Maximilien, Ajith Harshana Ranabahu
The Programmable Web: Agile, Social, And Grassroots Computing, E. Michael Maximilien, Ajith Harshana Ranabahu
Kno.e.sis Publications
Web services, the semantic Web, and Web 2.0 are three somewhat separate movements trying to make the Web a programmable substrate. While each has achieved some level of success on their own right, it is becoming apparent that the grassroots approach of the Web 2.0 is gaining greater success than the other two. In this paper we analyze each movement, briefly describing its main traits, and outlining its primary assumptions. We then frame the common problem of achieving a programmable Web within the context of distributed computing and software engineering and then attempt to show why Web 2.0 is closest …
Sa-Rest And (S)Mashups: Adding Semantics To Restful Services, Jonathan Lathem, Karthik Gomadam, Amit P. Sheth
Sa-Rest And (S)Mashups: Adding Semantics To Restful Services, Jonathan Lathem, Karthik Gomadam, Amit P. Sheth
Kno.e.sis Publications
The evolution of the Web 2.0 phenomenon has led to the increased adoption of the RESTful services paradigm. RESTful services often take the form of RSS/Atom feeds and AJAX based light weight services. The XML based messaging paradigm of RESTful services has made it possible to compose various services together. Such compositions of RESTful services is widely referred to as Mashups. In this paper, we outline the limitations in current approaches to creating mashups. We address these limitations by proposing a framework called as SA-REST. SA-REST adds semantics to RESTful services. Our proposed framework builds upon the original ideas in …
Sensor Data Management, Cory Andrew Henson
Sensor Data Management, Cory Andrew Henson
Kno.e.sis Publications
No abstract provided.
Csi Revisited: The Science Of Forensic Dna Analysis, Michael L. Raymer
Csi Revisited: The Science Of Forensic Dna Analysis, Michael L. Raymer
Kno.e.sis Publications
No abstract provided.
Trailblazing, Complex Hypothesis Evaluation, Abductive Reasoning And Semantic Web - Exploring Possible Synergy, Amit P. Sheth
Trailblazing, Complex Hypothesis Evaluation, Abductive Reasoning And Semantic Web - Exploring Possible Synergy, Amit P. Sheth
Kno.e.sis Publications
No abstract provided.