Computer Sciences Commons^™

Markov Chain Monte Carlo Bayesian Predictive Framework For Artificial Neural Network Committee Modeling And Simulation, Michael S. Goodrich

Computational Modeling & Simulation Engineering Theses & Dissertations

A logical inference method of properly weighting the outputs of an Artificial Neural Network Committee for predictive purposes using Markov Chain Monte Carlo simulation and Bayesian probability is proposed and demonstrated on machine learning data for non-linear regression, binary classification, and 1-of-k classification. Both deterministic and stochastic models are constructed to model the properties of the data. Prediction strategies are compared based on formal Bayesian predictive distribution modeling of the network committee output data and a stochastic estimation method based on the subtraction of determinism from the given data to achieve a stochastic residual using cross validation. Performance for Bayesian …

Modeling Stem Cell Population Dynamics, Samiur Arif

Computer Science Theses & Dissertations

Because of the stochastic nature of biological systems, mathematical and computational modeling approaches have become more acceptable to experimentalists and clinicians in recent years as contributing to new understandings of complicated cell mechanisms and tissue physiology. Indeed, even single cell or small tissue samples are complex dynamic systems that adapt to environmental challenges in space and time which is poorly understood. Mathematical models and computer simulations can explain and uncover unknown aspects of cell behavior and tissue functions. Models based on key biological mechanisms can give interesting insights and formulate predictions that cannot be derived from physical experiments or statistical …

Semantic Privacy Policies For Service Description And Discovery In Service-Oriented Architecture, Diego Z. Garcia, Miriam A M Capretz, M. Beatriz F. Toledo

Electrical and Computer Engineering Publications

Privacy preservation in Service-Oriented Architecture (SOA) is an open problem. This paper focuses on the areas of service description and discovery. The problems in these areas are that currently it is not possible to describe how a service provider deals with information received from a service consumer as well as discover a service that satisfies the privacy preferences of a consumer. There is currently no framework which offers a solution that supports a rich description of privacy policies and their integration in the process of service discovery. Thus, the main goal of this paper is to propose a privacy preservation …

Front Matter

Journal of Digital Forensics, Security and Law

No abstract provided.

Masthead

Journal of Digital Forensics, Security and Law

No abstract provided.

Back Matter

Journal of Digital Forensics, Security and Law

No abstract provided.

Identification Of Biomarkers That Distinguish Chemical Contaminants Based On Gene Expression Profiles, Xiaomou Wei, Junmei Ai, Youping Deng, Xin Guan, David R. Johnson, Choo Y. Ang, Chaoyang Zhang, Edward J. Perkins

Faculty Publications

Background: High throughput transcriptomics profiles such as those generated using microarrays have been useful in identifying biomarkers for different classification and toxicity prediction purposes. Here, we investigated the use of microarrays to predict chemical toxicants and their possible mechanisms of action.

Results: In this study, in vitro cultures of primary rat hepatocytes were exposed to 105 chemicals and vehicle controls, representing 14 compound classes. We comprehensively compared various normalization of gene expression profiles, feature selection and classification algorithms for the classification of these 105 chemicals into14 compound classes. We found that normalization had little effect on the averaged …

Orca Final Report, Michael Christensen

Journal of Undergraduate Research

BYU’s Fulton Supercomputing Lab (FSL) is a centralized campus resource whose mission is “to facilitate and enhance computationally-intensive research at BYU by providing reliable, state-of-the-art, high performance computing resources to faculty and students.” As part of that mission, Supercomputing provides large compute clusters and other systems for researchers to use as needed. If a researcher needs to do computationally intensive research that wouldn’t be feasible on a standard desktop, they can submit batch processing jobs to the lab’s systems and get their work done in a fraction of the time. A researcher’s code is then run in parallel on many …

Development Of Virtue Ethics Based Security Constructs For Information Systems Trusted Workers, John M. Gray, Gurvirender Tejay

CCE Student and Alumni Proceedings, Presentations, Speeches and Lectures

Despite an abundance of research on the problem of insider threats only limited success has been achieved in preventing trusted insiders from committing security violations. Virtue ethics may be a new approach that can be utilized to address this issue. Human factors such as moral considerations and decisions impact information system design, use, and security; consequently they affect the security posture and culture of an organization. Virtue ethics based concepts have the potential to influence and align the moral values and behavior of Information Systems workers with those of an organization in order to provide increased protection of IS assets. …

Bacibeans: A Netbeans Plugin For Concurrent Programs, Ashley Broadwell

Seaver College Research And Scholarly Achievement Symposium

C-- is a programming language developed by M. Ben-Ari to teach principles of concurrent and distributed programming. It is a small subset of the C language but with the added features of concurrency, semaphores, and monitors. BACI is an acronym for Ben-Ari Concurrency Interpreter. JavaBACI is an open-source command line concurrency simulator used by students to compile and run C-- programs. NetBeans is an integrated development environment (IDE) that many students use in our courses to develop Java and C++ programs. This talk describes the development of a NetBeans plug-in we call BACIBeans that integrates JavaBACI into NetBeans, combining the …

Analysis Of A Scholarly Social Networking Site: The Case Of The Dormant User, Meg Murray

Faculty Articles

Many scholarly social networking sites targeting an audience of academicians and researchers have appeared on the Internet in recent years. Their vision is to change the way researchers connect, share and collaborate to solve real world problems. Despite the hype, however, their impact on higher education is unclear. Studies exist that address the benefits of these sites, but studies that investigate the implications of how scholarly social networking systems vet information, including data related to user profiles and uploaded content, is nonexistent. This paper chronicles the system management of user information for an inactive user of a scholarly social networking …

How Many Credit Card Frauds Must We Endure Before Security Improves?, Maritza Martinez

UCF Forum

Yes, it can happen to you…

Inferences & Connections, Tamara Kneese

Media Studies

Data-oriented systems are inferring relationships between people based on genetic material, behavioral patterns (e.g., shared geography imputed by phone carriers), and performed associations (e.g., "friends" online or shared photographs). What responsibilities do entities who collect data that imputes connections have to those who are implicated by association? For example, as DNA and other biological materials are collected outside of medicine (e.g., at point of arrest, by informatics services like 23andme, for scientific inquiry), what rights do relatives (living, dead, and not-yet-born) have? In what contexts is it acceptable to act based on inferred associations and in which contexts is it …

Algorithmic Accountability, Tamara Kneese

Media Studies

Accountability is fundamentally about checks and balances to power. In theory, both government and corporations are kept accountable through social, economic, and political mechanisms. Journalism and public advocates serve as an additional tool to hold powerful institutions and individuals accountable. But in a world of data and algorithms, accountability is often murky. Beyond questions about whether the market is sufficient or governmental regulation is necessary, how should algorithms be held accountable? For example what is the role of the fourth estate in holding data-oriented practices accountable?

Data Supply Chains, Tamara Kneese

Media Studies

As data moves between actors and organizations, what emerges is a data supply chain. Unlike manufacturing supply chains, transferred data is often duplicated in the process, challenging the essence of ownership. What does ethical data labor look like? How are the various stakeholders held accountable for being good data guardians? What does clean data transfer look like? What kinds of best practices can business and government put into place? What upstream rights to data providers have over downstream commercialization of their data?

Predicting Human Behavior, Tamara Kneese

Media Studies

Countless highly accurate predictions can be made from trace data, with varying degrees of personal or societal consequence (e.g., search engines predict hospital admission, gaming companies can predict compulsive gambling problems, government agencies predict criminal activity). Predicting human behavior can be both hugely beneficial and deeply problematic depending on the context. What kinds of predictive privacy harms are emerging? And what are the implications for systems of oversight and due process protections? For example, what are the implications for employment, health care and policing when predictive models are involved? How should varied organizations address what they can predict?

Inequalities And Asymmetries, Tamara Kneese

Media Studies

The availability of data is not evenly distributed. Some organizations, agencies, and sectors are better equipped to gather, use, and analyze data than others. If data is transformative, what are the consequences of defense and security agencies having greater capacity to leverage data than, say, education or social services? Financial wherewithal, technical capacity, and political determinants all affect where data is employed. As data and analytics emerge, who benefits and who doesn't, both at the individual level and the institutional level? What about the asymmetries between those who provide the data and those who collect it? How does uneven data …

Advances In Piecewise Smooth Image Reconstruction, Ralf Juengling

Dissertations and Theses

Advances and new insights into algorithms for piecewise smooth image reconstruction are presented. Such algorithms fit a piecewise smooth function to image data without prior knowledge of the number of regions or the location of region boundaries in the best fitting function. This is a difficult model selection problem since the number of parameters of possible solutions varies widely.

The approach followed in this work was proposed by Yvan Leclerc. It uses the Minimum Description Length principle to make the reconstruction problem well-posed: the best fitting function yields the shortest encoding of the image data. In order to derive a …

Towards Constructing Interactive Virtual Worlds, Francis Chang

Dissertations and Theses

Networked virtual reality environments including virtual worlds devoted to entertainment, online socializing and remote collaboration have grown in popularity with the rise of commercially available consumer graphics hardware and the growing ubiquity of the Internet. These virtual worlds are typified by a persistent simulated three-dimensional space that communicates over a computer network, where users interact with the environment and each other through digital avatars. Development of these virtual worlds challenges the limits of the networking infrastructure, 3D streaming graphics techniques, and the distributed computing design of the virtual world systems that manages the simulation. In this dissertation, we explore solutions …

An Analysis Of Eye Movements With Helmet Mounted Displays, Kalyn A. Tung

Theses and Dissertations

Helmet or Head-Mounted Displays (HMD) applications have expanded to include a range from advanced military cockpits to consumer glasses. However, users have documented loss of legibility while undergoing vibration. Recent research indicates that undesirable eye movement is related to the vibration frequency a user experiences. In vibrating environments, two competing eye reflexes likely contribute to eye movements. The Vestibulo-ocular Reflex responds to motion sensed in the otoliths while the pursuit reflex is driven by the visual system to maintain the desired image on the fovea. This study attempts to isolate undesirable eye motions that occur while using a HMD by …

A Recommender System In The Cyber Defense Domain, Katherine B. Lyons

Theses and Dissertations

In the cyber domain, network defenders have traditionally been placed in a reactionary role. Before a defender can act they must wait for an attack to occur and identify the attack. This places the defender at a disadvantage in a cyber attack situation and it is certainly desirable that the defender out maneuver the attacker before the network has been compromised. The goal of this research is to determine the value of employing a recommender system as an attack predictor, and determine the best configuration of a recommender system for the cyber defense domain. The most important contribution of this …

Multi-Robot Coverage With Dynamic Coverage Information Compression, Zachary L. Wilson

Student Work

This work considers the problem of coverage of an initially unknown environment by a set of autonomous robots. A crucial aspect in multi-robot coverage involves robots sharing information about the regions they have already covered at certain intervals, so that multiple robots can avoid repeated coverage of the same area. However, sharing the coverage information between robots imposes considerable communication and computation overhead on each robot, which increases the robots’ battery usage and overall coverage time. To address this problem, we explore a novel coverage technique where robots use an information compression algorithm before sharing their coverage maps with each …

Using Spammers' Computing Resources For Volunteer Computing, Thai Le Quy Bui

Dissertations and Theses

Spammers are continually looking to circumvent counter-measures seeking to slow them down. An immense amount of time and money is currently devoted to hiding spam, but not enough is devoted to effectively preventing it. One approach for preventing spam is to force the spammer's machine to solve a computational problem of varying difficulty before granting access. The idea is that suspicious or problematic requests are given difficult problems to solve while legitimate requests are allowed through with minimal computation. Unfortunately, most systems that employ this model waste the computing resources being used, as they are directed towards solving cryptographic problems …

Clonepedia: Summarizing Code Clones By Common Syntactic Context For Software Maintenance, Yun Lin, Zhenchang Xing, Xin Peng, Yang Liu, Jun Sun, Wenyun Zhao, Jin Song Dong

Research Collection School Of Computing and Information Systems

Code clones have to be made explicit and be managed in software maintenance. Researchers have developed many clone detection tools to detect and analyze code clones in software systems. These tools report code clones as similar code fragments in source files. However, clone-related maintenance tasks (e.g., refactorings) often involve a group of code clones appearing in larger syntactic context (e.g., code clones in sibling classes or code clones calling similar methods). Given a list of low-level code-fragment clones, developers have to manually summarize from bottom up low-level code clones that are relevant to the syntactic context of a maintenance task. …

Google Chrome: More Than A Browser, Daniel E. Rivera

Interdisciplinary STEM Teaching & Learning Conference (2012-2019) (Archived)

Chrome is more than a browser. It’s an operating system in itself, and it’s transforming the educational computing experience. Come learn about Chrome’s features such as data syncing across computers (bookmarks, passwords, settings, etc), and most importantly, Chrome-specific apps. Learn about Chromebooks as well - those powerful, fast, and cheap laptops that are spreading like wildfire.

Pwm: A Secure Webmail System Designed For Easy Adoption, Benjamin W. Burgon

Theses and Dissertations

None of the three largest webmail service providers (serving over 1 billion users) support end-to-end message encryption. Encrypted email has never seen mass adoption because it is prohibitive for non-experts to use. Private WebMail (Pwm) is our extension to popular webmail systems that lets users easily encrypt sensitive messages without having to first contact the recipient and share information. It is designed to spread quickly in a grassroots fashion so that a user receiving their first encrypted message can quickly and easily start using the system. This thesis describes the design and implementation of Pwm, then measures its usability through …

Complexity, Heuristic, And Search Analysis For The Games Of Crossings And Epaminondas, David W. King Jr.

Theses and Dissertations

Games provide fertile research domains for algorithmic research. Often, game research helps solve real-world problems through the testing and refinement of search algorithms in game domains. Other times, game research finds limits for certain algorithms. For example, the game of Go proved intractable for the Min-Max with Alpha-Beta pruning algorithm leading to the popularity of Monte-Carlo based search algorithms. Although effective in Go, and game domains once ruled by Alpha-Beta such as Lines of Action, Monte-Carlo methods appear to have limits too as they fall short in tactical domains such as Hex and Chess. In a continuation of this type …

Multi Sensor System For Pedestrian Tracking And Activity Recognition In Indoor Environments, Juan Jose Marron Monteserin

USF Tampa Graduate Theses and Dissertations

The widespread use of mobile devices and the rise of Global Navigation Satellite Systems (GNSS) have allowed mobile tracking applications to become very popular and valuable in outdoor environments. However, tracking pedestrians in indoor environments with Global Positioning System (GPS)-based schemes is still very challenging given the lack of enough

signals to locate the user. Along with indoor tracking, the ability to recognize pedestrian behavior and activities can lead to considerable growth in location-based applications including

pervasive healthcare, leisure and guide services (such as, museum, airports, stores, etc.), and emergency services, among the most important ones.

This thesis presents a …

Managing Autonomy By Hierarchically Managing Information: Autonomy And Information At The Right Time And The Right Place, Rongbin Lin

Theses and Dissertations

When working with a complex AI or robotics system in a specific application, users often need to incorporate their special domain knowledge into the autonomous system. Such needs call for the ability to manage autonomy. However, managing autonomy can be a difficult task because the internal mechanisms and algorithms of the autonomous components may be beyond the users' understanding. We propose an approach where users manage autonomy indirectly by managing information provided to the intelligent system hierarchically at three different temporal scales: strategic, between-episodes, and within-episode. Information management tools at multiple temporal scales allow users to influence the autonomous behaviors …

Spring 2014

In The Loop

Hour of code inspires next generation of computer scientists; CDM students, faculty and alumni demystify mental health disorders; Study abroad intersession enhances global perspective; Double Demon brings Disney mobile games to life; Around the college; Accolades