Chemistry Commons^™

Subterranean Medicinal Bottles Are Treasures That Reveal The Growth Of Lincoln's Early Drug Stores, Mark Griep, June Weber, Erik Schulz, Effie Athanassopoulos

Department of Anthropology: Faculty Publications

Archeologists unearthed medicine bottles embossed with the names of nine early Lincoln (Nebraska) drug stores, giving insight into the rapid growth of pharmacies and health care from the 1880s up to the Pure Food and Drug Act of 1906.

Substrate Interference And Strain In The Second-Harmonic Generation From Mose2 Monolayers, Sudeep Puri, Sneha Patel, Jose Luis Cabellos, Luis Enrique Rosas-Hernandez, Kaitlin Reynolds, Hugh O.H. Churchill, Salvador Barraza-Lopez, Bernardo S. Mendoza, Hiroyuki Nakamura

Physics Faculty Publications and Presentations

Nonlinear optical materials of atomic thickness, such as non-centrosymmetric 2H transition metal dichalcogenide monolayers, have a second-order nonlinear susceptibility (χ⁽²⁾) whose intensity can be tuned by strain. However, whether χ⁽²⁾ is enhanced or reduced by tensile strain is a subject of conflicting reports. Here, we grow high-quality MoSe₂ monolayers under controlled biaxial strain created by two different substrates and study their linear and nonlinear optical responses with a combination of experimental and theoretical approaches. Up to a 15-fold overall enhancement in second-harmonic generation (SHG) intensity is observed from MoSe₂ monolayers grown on SiO₂ when …

Development Of Malate Biosensor-Containing Hydrogels And Living Cell-Based Sensors, Nathan J. Ricks, Monica Brachi, Kevin Mcfadden, Rohit G. Jadhav, Shelley D. Minteer, Ming C. Hammond

Chemistry Faculty Research & Creative Works

Malate is a key intermediate in the citric acid cycle, an enzymatic cascade that is central to cellular energy metabolism and that has been applied to make biofuel cells. To enable real-time sensing of malate levels, we have engineered a genetically encoded, protein-based fluorescent biosensor called Malon specifically responsive to malate by performing structure-based mutagenesis of the Cache-binding domain of the Citron GFP-based biosensor. Malon demonstrates high specificity and fluorescence activation in response to malate and has been applied to monitor enzymatic reactions in vitro. Furthermore, we successfully incorporated Malon into redox polymer hydrogels and bacterial cells, enabling analysis of …

Enzyme Encapsulation Within The Hk97 Virus-Like Particle: An Investigation Of Substrate Inhibition Kinetics Within A Confined And Crowded Environment, Joseph B. Lively

Chemistry Theses

Substrate inhibition is a paradoxical phenomenon observed in enzyme kinetics where increasing substrate concentrations lead to a marked decrease in the rates of enzyme-catalyzed reactions. Affecting an estimated 20% of studied enzymes, substrate inhibition poses significant challenges to the understanding of their function in essential biological processes and to their exploitation in industrial and therapeutic contexts. Studies show substrate inhibition to be a real limitation in vitro and rational conclusions have been drawn to explain the relevance of substrate inhibition in the self-regulation of biological pathways. However, there is currently no consensus on what role substrate inhibition plays in vivo …

Cobalt Molybdenum Telluride As An Efficient Trifunctional Electrocatalyst For Seawater Splitting, Rajarshi Kar, Amideddin Nouralishahi, Harish Singh, Manashi Nath

Chemistry Faculty Research & Creative Works

A mixed-metal ternary chalcogenide, cobalt molybdenum telluride (CMT), has been identified as an efficient tri-functional electrocatalyst for seawater splitting, leading to enhanced oxygen evolution reaction (OER), hydrogen evolution reaction (HER), and oxygen reduction reaction (ORR). The CMT was synthesized by a single step hydrothermal technique. Detailed electrochemical studies of the CMT-modified electrodes showed that CMT has a promising performance for OER in the simulated seawater solutions, exhibiting a small overpotential of 385 mV at 20 mA cm⁻², and superior catalyst durability for prolonged period of continuous oxygen evolution. Interestingly, while gas chromatography analysis confirmed the evolution of oxygen …

Solubility Characterization Of Organic Molecules For Aqueous Organic Redox Flow Batteries, Anthony W. Ferrell, Harkeerith K. Vij, Seamus D. Jones

College of Engineering Summer Undergraduate Research Program

The major obstacle to renewable energy sources is a lack of long-term energy storage capabilities. Energy produced during the day dissipates, leaving insufficient electricity for at night. The goal of the project is to design an Aqueous Organic Redox Flow Battery (AORFB) to act as long-term energy storage. Work has been done using machine learning to identify suitable compounds for the batteries. In this work there was no indication as to the aqueous solubility of the molecules; this controls the device’s energy storage capabilities. We used a machine learning model to determine the aqueous solubility of slightly more than 3000 …

X-Ray Fluorescence Analysis Of Early Settler Artifacts Recovered From Gossman Caves And Prairie Complex, Zachry S. Poshusta, Joshua Sebree

Fall 2024 - Chemical Analysis Class Projects

Meskwaki Tribe: Lived in Jackson County, Iowa, until 1845.

European Settlers: Took over the land, building structures and forming townships.

Artifacts: Both groups left behind pottery shards, campsite remnants, and building foundations.

Study Focus: Analyzing artifacts using X-ray Fluorescence spectrometry.

Sample Sites: Gossman Prairie and Cave Complex.

Objective: Determine if both groups used local clay for crafting.

Elemental Analysis Of Luminescent Cave Formations Using X-Ray Fluorescence, Esther Farran, Joshua Sebree

Fall 2024 - Chemical Analysis Class Projects

Luminescent calcite formations (N = 21) were taken from nine karst caves in a valley in Northeast Iowa. Ten samples fluoresced bright blue under UV light and phosphoresced green. Four samples fluoresced dull pink instead of blue. Seven samples do not fluoresce as strongly as the other samples. An elemental analysis was performed on the samples using a Bruker Tracer 5g handheld XRF. Analysis shows some samples may experience fluorescence quenching by the presence of iron and some amount of fluorescence by manganese.

Going With The Flow: Quantifying Lead Levels Along A Natural Water Pathway, Kailah Thompson, Joshua Sebree

Fall 2024 - Chemical Analysis Class Projects

Lead contamination in natural water is a significant concern due to its toxic effects on both ecological and human health. Jackson County, with its historical background in lead mining and ammunition production, presents an ideal region to study lead’s movement and potential impacts in natural water environments. This research traces the journey of lead ions from a spring, through a creek, and into a pond, examining how lead concentrations change along the water pathway. The study uses differential pulse stripping voltammetry, a precise technique for trace metal analysis, alongside pH and temperature measurements to provide insight into factors that influence …

Soil Condition Variability: Carbon Analysis Of Prairie, Crop, And Forest Soil In Northeast Iowa, Jacqueline Heggen, Joshua Sebree, David Gossman

Fall 2024 - Chemical Analysis Class Projects

• Iowa’s soil supports crop growth, stores carbon, filters water impurities, provides a habitat for organisms, and stores and provides water and nutrients for plants.
• The availability of elements within soil is an indicator of the viability of soil.
• Total % carbon is the percent composition of carbon in the sample. Total organic carbon enters the soil through the decomposition of plants, microorganisms, and animals.
• C:H ratios can reveal the potential for microbial activity and soil fertility.
• Gossman property allows for the analysis of a variety of different soil conditions in one location

Identifying Pottery Extracts Using Chromatography-Mass Spectroscopy, Evelyn Lopez, Joshua Sebree

Fall 2024 - Chemical Analysis Class Projects

• Located in Jackson County, Iowa, Gossman Farm fosters many unique environments such as caves, freshwater springs, and various soil environments.
• This research focuses on the pottery fragments found at Indian Cave located within the Gossman property.
• Pottery fragments have been recovered at Indian Cave by Dave Gossman. It’s believed that these pottery fragments are from the Native Americans that used to inhabit the area.
• By analyzing the pottery fragments at Gossman Park, insight can be given on the history of the settlers at Gossman Farm and the use of the pottery.

Field-Ready Voltammetric Detection Of Aqueous Cadmium (Ii) Ions On Aptamer-Modified Inkjet-Printed Gold Electrode, Glenn D. Ongayo, Jiena Lynne R. Pauco, Erwin P. Enriquez

Chemistry Faculty Publications

In this work, a simple and cost-effective integrated electrode system consisting of aptamer-modified inkjet-printed (IJP) gold working electrode and unmodified IJP gold as counter electrode (both printed on polyethylene naphthalate substrate) has been developed for low-cost detection of cadmium (II) ion in water. The technique uses a Cd2+ (Cd-4) aptamer, a single-stranded DNA with 31 nucleotides trapped on the working electrode using the self-assembly monolayer (SAM) technique. The electrochemical detection of Cd2+ is based on the change in redox peaks of [Fe(CN)6]3-/4- as a redox probe in cyclic voltammetry. The change in peak current is caused by a difference in …

Bioluminesence-Induced Photoredox Catalysis And Its Mechanisms, Dominic Jeffrey Bates

Theses and Dissertations

The bioluminescence-induced photoredox reaction (BIPR) is a novel methodology developed to overcome the limitations of photo-induced chemistry by initiating chemical work using bioluminescent Escherichia coli as a photon source. In industry, photochemistry is superseded by thermochemical reaction processes. Despite its massive potential, there are very few applications in industry for photochemistry. Unlike thermochemistry, reaction scale-ups are not as easy as simple dimensional increases in a reaction vessel due to the nature of light. This deficiency is seemingly overcome through the development of flow technologies; however, the overall yield of such methods remains incomparable with those utilizing thermochemistry. This thesis focuses …

Crystal Archer: Profile Of The Newest Chbc Faculty Member, Danna Jaimes-Fajardo, Jeremy J. Smith, Lutishoor Salisbury

University Libraries Faculty Publications and Presentations

Presents the research profile of Crystal Archer, Assistant Professor, Chemistry and Biochemistry department. It highlights her research interests, education, and impact of her research.

Polyphenol-Induced Protein Structural Modifications In Sorghum On Pasting Properties, Annegret Jannasch, Ya-Jane Wang, Sun-Ok Lee, Rohana Liyanage, Zeina Alraawi, Suresh Kumar Thallapuranam, William L. Rooney

Chemistry & Biochemistry Faculty Publications and Presentations

Black sorghum contains a high amount of anthocyanins and proanthocyanidins, whereas white sorghum predominantly comprises phenolic acids. Polyphenols covalently and non-covalently interact with protein, whereas the structure of both compounds affects these interactions. This study investigated the interactions between phenolic acids, anthocyanins, proanthocyanidins and prolamin, which is the major protein fraction in sorghum, and their effect on the pasting properties of white and black, whole and milled sorghum using different chemical agents. Urea increased the pasting viscosity of black sorghum, but not that of white sorghum, indicating that hydrogen bonds and hydrophobic interactions between prolamin and anthocyanins and proanthocyanidins play …

Selective Hydrolysis Of Heterooligosaccharides By Poly(Acrylate) Gel Catalysts, Susanna Striegler

Chemistry & Biochemistry Faculty Publications and Presentations

Natural glycoside hydrolases are distinguished by their ability to hydrolyze glycosidic bonds with high efficiency and selectivity. This feature is achieved through specific interactions in the active site during catalytic turnover and is not just facilitated by two catalytically active amino acids. Intrigued by these features, a biomimetic α-galactosidase mimic was developed using an empirical catalyst design. Starting with a library of 704 gels of which 250 have a unique composition synthesized from TEGDMA cross-linker and 7 selected monomers, 238 monomodal gels are evaluated for their ability to hydrolyze the 1→6 α-glycosidic bond in the disaccharide melibiose. Among those, 13 …

Salts Of 2-Amino-5-Iodo­Pyridinium, Benjamin A. Mukda, Diane A. Dickie, Mark M. Turnbull

Chemistry

Reaction of 2-amino-5-iodopyridine (5IAP) with concentrated HBr at room temperature yielded 2-amino-5-iodopyridinium bromide, C₅H₆IN₂⁺·Br^- or (5IAPH)Br. The complex formed pale-yellow crystals, which exhibit significant hydrogen bonding between the amino and pyridinium N - H donors and bromide ion acceptors. Halogen bonding is also observed. Similarly, reaction of 5IAP with cobalt(II) chloride in mixed HCl/HBr in 1-propanol yielded 2-amino-5-iodopyridinium (2-amino-5-iodopyridine-κN¹)bromido/chlorido(0.51/2.48)cobalt(II), (C₅H₆IN₂)[CoBr_0.51Cl_2.48(C₅H₅IN₂)] or (5-IAPH)[(5IAP)CoCl_2.48Br_0.51], as blue block-shaped crystals. Two of the three …

Investigating In Vivo Tumor Biomolecular Changes Following Radiation Therapy Using Raman Spectroscopy, Varsha Karunakaran, Sina Dadgar, Santosh K. Paidi, April Mordi, Whitney A. Lowe, Umme Marium Mim, Jesse D. Ivers, Joel Rodriguez Troncoso, Jared A. Mcpeake, Alric Fernandes, Sanidhya D. Tripathi, Ishan Barman, Narasimhan Rajaram

Biomedical Engineering Faculty Publications and Presentations

Treatment resistance is a major bottleneck in the success of cancer therapy. Early identification of the treatment response or lack thereof in patients can enable an earlier switch to alternative treatment strategies that can enhance response rates. Here, Raman spectroscopy was applied to monitor early tumor biomolecular changes in sensitive (UM-SCC-22B) and resistant (UM-SCC-47) head and neck tumor xenografts for the first time in in vivo murine tumor models in response to radiation therapy. We used a validated multivariate curve resolution-alternating least-squares (MCR-ALS) model to resolve complex multicomponent Raman spectra into individual pure spectra and their respective contributions. We observed …

Stability Of The S-N Bond In S-Nitrosothiols: Computational And Experimental Approach, Rustam Sabitov

Dissertations (1934 -)

S-Nitrosothiols (RSNOs) are chemical compounds capable to transport nitric oxide (NO) and show promise in the treatment of cardiovascular diseases. RSNOs occur naturally in-vivo, and others have been synthesized in-vitro as potential drug candidates for NO transport and release. However, RSNOs are inherently unstable due to their weak S–N bond (D0(S-N)=25–30 kcal/mol), so developing a deeper understanding of the factors influencing the RSNOs stability is crucial. In Chapter 2, we investigated the substituent effect on the -SNO group properties. Substituting R– in RSNOs with more electro-donating character can stabilize the –SNO group according to the Natural Resonance Theory (NRT). But …

Ks18, A Mcl-1 Inhibitor, Improves The Effectiveness Of Bortezomib And Overcomes Resistance In Refractory Multiple Myeloma By Triggering Intrinsic Apoptosis., Omar S Al-Odat, Weam Othman Elbezanti, Krishne Gowda, Sandeep K Srivastava, Shantu G Amin, Subash C. Jonnalagadda, Tulin Budak-Alpdogan, Manoj K Pandey

Cooper Medical School of Rowan University Departmental Research

Despite a record number of clinical studies investigating various anti-myeloma treatments, the 5-year survival rate for multiple myeloma (MM) patients in the US is only 55%, and almost all patients relapse. Poor patient outcomes demonstrate that myeloma cells are "born to survive" which means they can adapt and evolve following treatment. Thus, new therapeutic approaches to combat survival mechanisms and target treatment resistance are required. Importantly, Mcl-1, anti-apoptotic protein, is required for the development of MM and treatment resistance. This study looks at the possibility of KS18, a selective Mcl-1 inhibitor, to treat MM and overcome resistance. Our investigation demonstrates …

A Multiscale Approach To Understanding The Shared Blue-Orange Flower Color Polymorphism In Two Lysimachia Species, Mercedes Sánchez-Cabrera, Eduardo Narbona, Montserrat Arista, Pedro L. Ortiz, Francisco J. Jiménez-López, Amelia A. Fuller, Benjamin Carter, Justen B. Whittall

Chemistry and Biochemistry

Background
Polymorphisms are common in nature, but they are rarely shared among closely related species. Polymorphisms could originate through convergence, ancestral polymorphism, or introgression. Although shared neutral genomic variation across species is commonplace, few examples of shared functional traits exist. The blue-orange petal color polymorphisms in two closely related species, Lysimachia monelli and L. arvensis were investigated with UV-vis reflectance spectra, flavonoid biochemistry, and transcriptome comparisons followed by climate niche analysis.

Results
Similar color morphs between species have nearly identical reflectance spectra, flavonoid biochemistry, and ABP gene expression patterns. Transcriptome comparisons reveal two orange-specific genes directly involved in both blue-orange …

Accurate Crystal Structure Prediction Of New 2d Hybrid Organic–Inorganic Perovskites, Nima Karimitari, William J. Baldwin, Evan W. Muller, Zachary J.L. Bare, W. Joshua Kennedy, Gábor Csányi, Christopher Sutton

Faculty Publications

Low-dimensional hybrid organic–inorganic perovskites (HOIPs) are promising electronically active materials for light absorption and emission. The design space of HOIPs is extremely large, as a variety of organic cations can be combined with different inorganic frameworks. This not only allows for tunable electronic and mechanical properties but also necessitates the development of new tools for in silico high throughput analysis of candidate materials. In this work, we present an accurate, efficient, and widely applicable machine learning interatomic potential (MLIP) trained on 86 diverse experimentally reported HOIP materials. This MLIP was tested on 73 experimentally reported perovskite compositions and achieves a …

Comparative Analysis In The Effectiveness Of Real Vs. Virtual Labs In Enhancing Students’ Conceptual Understanding Of Archimedes’ Principle, Judeanto Edy, Sutopo Sutopo, Edi Supriana

Jurnal Pendidikan Sains

This research aimed to investigate the effectiveness of virtual laboratories compared to real laboratories in improving students’ conceptual understanding of Archimedes’ principle. A quantitative approach was employed using a pretest-posttest design. The measurement instrument used in this study was a concept mastery test, consisting of 15 multiple-choice questions. Data were analyzed using an independent sample T-test. The research involved students from two XI IPA classes, each consisting of 33 students. The findings indicated that both virtual and real laboratories in the learning process could enhance students’ conceptual understanding. The study concluded that there was no significant difference between the virtual …

Exploration Of Students’ Scientific Argumentation Skills On Static Fluid Topics, Trio Junira Fernando, Parno Parno, Markus Diantoro

Jurnal Pendidikan Sains

The weakness in students’ scientific argumentation, particularly in providing evidence-based arguments, has become a significant concern in education. This study aims to assess students’ scientific argumentation skills specifically on the topic of static fluids. The survey was conducted with 78 twelfth-grade students from private high schools in East Java, Indonesia, who had previously studied this topic. A scientific argumentation test instrument, consisting of an essay format with five questions, was employed to collect data. The data were analyzed using descriptive statistics, followed by a classification based on static fluid subtopics and the level of scientific argumentation skill. The results indicated …

Quinoxaline 1,4-Di-N-Oxide Derivatives As New Antinocardial Agents, Isidro Palos, Alonzo Gonzalez-Gonzalez, Alma D. Paz-Gonzalez, José C. Espinoza-Hicks, Debasish Bandyopadhyay, Norma Paniagua-Castro, Marlene S. Galeana-Salazar, Jorge Ismael Castañeda-Sánchez, Julieta Luna-Herrera, Gildardo Rivera-Sanchez

School of Integrative Biological & Chemical Sciences Faculty Publications

Mycetoma is currently considered as a neglected tropical disease. The incidence of mycetoma is unknown but most of the worldwide cases are present in the “mycetoma belt” including countries like Mexico, India, Senegal, and others. The treatment of mycetoma depends on the etiological agent responsible for the case. Treatment success reaches 60 to 90%; however, common treatment has been reported to be ineffective in some cases, due in part to resistance to the prescribed antibiotics. Therefore, it is necessary to develop new therapeutic options. In the past two decades, quinoxaline derivatives have shown relevance as antibacterial agents. Therefore, in this …

Impact Of Problem-Based Learning Integrated With Blended Learning On Students’ Collaborative Skills, Angel Regina, Yustina Febblina Daryanes, Riki Apriyandi Putra

Jurnal Pendidikan Sains

This study investigates the impact of implementing a Problem-Based Learning (PBL) model integrated with Blended Learning on enhancing students’ collaborative abilities. Conducted in class XI of SMA Negeri Plus Riau Province during the 2021/2022 academic year, the research utilized a control group design to compare the collaborative skills of students in an experimental class, which employed the PBL model, with those in a control class. The study assessed four key indicators of collaborative ability: working productively, valuing opinions, compromising, and sharing responsibility. The findings revealed that students in the experimental class showed significant improvements in all four indicators compared to …

Influencing Factors Of Competency Achievement In Fiber Optic Installation Engineering: A Study On Vocational School Graduates In Indonesia, Pangadongan Elfin Pujianto, Djoko Kustono, Hakkun Elmunsyah

Jurnal Pendidikan Sains

This study investigates the factors influencing the achievement of competencies in the field of Fiber Optic Installation Engineering (TIFO) among vocational school graduates in Indonesia and their subsequent performance in the workforce. Utilizing a quantitative approach, the research examines the relationship between several key variables, including national examination scores, quality of infrastructure, teaching competence, and telecommunication systems subject scores. Path analysis structural equation modeling was employed to determine the direct and indirect effects of these variables on TIFO competency achievement and graduates’ performance. The findings reveal that the quality of infrastructure is the most significant contributor to competency achievement, accounting …

Development Of E-Modules Based On Pjbl-Steam And Virtual Simulation Media On Work And Energy Topic As An Effort To Improve Students’ Critical Thinking Skills, Farah Rafidah, Parno Parno, Nasikhudin Nasikhudin, Marlina Ali

Jurnal Pendidikan Sains

Work and energy are fundamental topics in physics. However, enhancing students’ critical thinking skills in these areas remains a challenge. This research aimed to develop and assess the validity and readability of e-modules designed with PjBL-STEAM and virtual simulation media to address this issue. The development process followed a 4D model, and the resulting e-modules were evaluated as strongly valid category. The validation tests yielded percentage scores of 91.6% for media, 89.3% for content, and 88.0% for lesson plans. Additionally, the readability test achieved a score of 84.6%, indicating a excellent level of comprehensibility. These findings suggest that the e-modules …

Zhong-Qun Tian, Academician And Honorary Member Of Electrochemistry Committee Chinese Chemical Society, Achieved "Raman Lifetime Award", Editorial Office Of J.Electrochem.

Journal of Electrochemistry

No abstract provided.

2024 Tianmulake Advanced Anode Materials Innovation Forum And Sixth National Conference Of Advanced Battery Failure Analysis And Testing Technology Concluded Successfully, Editorial Office Of J.Electrochem.

Journal of Electrochemistry

No abstract provided.