Other Applied Mathematics Commons^™

A Categorical Framework For Modeling Genetic Drift, Taylor G. Mendes

Rose-Hulman Undergraduate Mathematics Journal

Genetic drift describes changes in allele frequencies that arise from chance sampling in finite populations. This paper develops a categorical framework for organizing the structural features of drift. Population states are modeled as objects, evolutionary transitions as morphisms, reversible transitions as groupoid morphisms, and structure-preserving comparisons between models as functors. Group actions are used to describe deterministic evolutionary operators such as mutation and selection, while orbits and fixed points identify reachable allele-frequency states and stable absorbing outcomes. Universal properties are then used to describe drift as a coherence condition connecting stochastic transitions with deterministic evolutionary maps. The resulting framework complements …

On The Construction And Mathematical Analysis Of The Wavelet Transform And Its Matricial Properties, Diego Sejas Viscarra

Rose-Hulman Undergraduate Mathematics Journal

We study the properties of computational methods for the Wavelet Transform and its Inverse from the point of view of Linear Algebra. We present a characterization of such methods as matrix products, proving in particular that each iteration corresponds to the multiplication of an adequate unitary matrix. From that point we prove that some important properties of the Continuous Wavelet Transform, such as linearity, distributivity over matrix multiplication, isometry, etc., are inherited by these discrete methods.

This work is divided into four sections. The first section corresponds to the classical theoretical foundation of harmonic analysis with wavelets; it is used …

Dna Self-Assembly Design For Gear Graphs, Chiara Mattamira

Rose-Hulman Undergraduate Mathematics Journal

Application of graph theory to the well-known complementary properties of DNA strands has resulted in new insights about more efficient ways to form DNA nanostructures, which have been discovered as useful tools for drug delivery, biomolecular computing, and biosensors. The key concept underlying DNA nanotechnology is the formation of complete DNA complexes out of a given collection of branched junction molecules. These molecules can be modeled in the abstract as portions of graphs made up of vertices and half-edges, where complete edges are representations of double-stranded DNA pieces that have joined together. For efficiency, one aim is to minimize the …

Variance Of Clusterings On Graphs, Thomas Vlado Mulc

Mathematical Sciences Technical Reports (MSTR)

Graphs that represent data often have structures or characteristics that can represent some relationships in the data. One of these structures is clusters or community structures. Most clustering algorithms for graphs are deterministic, which means they will output the same clustering each time. We investigated a few stochastic algorithms, and look into the consistency of their clusterings.

Parametric Lp Analysis, Allen Holder

Mathematical Sciences Technical Reports (MSTR)

Parametric linear programming is the study of how optimal properties depend on data parametrizations. The study is nearly as old as the field of linear programming itself, and it is important since it highlights how a problem changes as what is often estimated data varies. We present what is a modern perspective on the classical analysis of the objective value's response to parametrizations in the right-hand side and cost vector. We also mention a few applications and provide citations for further study