Physical Sciences and Mathematics Commons^™

Modeling Data Center Co-Tenancy Performance Interference, Wei Kuang

Dissertations, Master's Theses and Master's Reports

A multi-core machine allows executing several applications simultaneously. Those jobs are scheduled on different cores and compete for shared resources such as the last level cache and memory bandwidth. Such competitions might cause performance degradation. Data centers often utilize virtualization to provide a certain level of performance isolation. However, some of the shared resources cannot be divided, even in a virtualized system, to ensure complete isolation. If the performance degradation of co-tenancy is not known to the cloud administrator, a data center often has to dedicate a whole machine for a latency-sensitive application to guarantee its quality of service. Co-run …

Evaluation, Improvement, And Application Of Models Of Environmental Fate And Transport Of Atmosphere-Surface Exchangeable Pollutants (Aseps), Tanvir Khan

Dissertations, Master's Theses and Master's Reports

Certain toxic, semivolatile chemicals, also known as atmosphere-surface exchangeable pollutants (ASEPs) are emitted into the environment from anthropogenic activities and natural sources. This dissertation focused on the (i) evaluation and improvement of dry particle deposition and atmosphere-surface exchange parameterizations of ASEPs for use in chemical transport models (CTMs), and (ii) application of a dynamic multimedia model to examine recovery of Lake Superior from historical inputs of polychlorinated biphenyl (PCB) compounds (a class of ASEPs) contamination.

Current knowledge has been inadequate to propose quantitative measures of the relative performance of available dry particle deposition parameterizations. In Chapter 1 of this dissertation, …

Comparison Of Karstification Methods And Isostatic Rebound In The Suwannee River Basin, Florida, Toni Larche

Dissertations, Master's Theses and Master's Reports

Plio-Pleistocene beach ridges in northern Florida are nearly 50 m above current sea level, but sea level during that time is not known to have been more than 25 m above current sea level. The height of beach ridges in northern Florida therefore create a conundrum because Florida is located on a passive margin in what is considered a tectonically stable environment. A series of recent studies have suggested that uplift on the Florida peninsula may be the result of the removal of subsurface crustal mass. Karstification of Florida’s carbonate matrix may provide a mechanism for subsurface crustal mass removal …

Joint Analysis Of Multiple Phenotypes In Association Studies, Xiaoyu Liang

Dissertations, Master's Theses and Master's Reports

Genome-wide association studies (GWAS) have become a very effective research tool to identify genetic variants of underlying various complex diseases. In spite of the success of GWAS in identifying thousands of reproducible associations between genetic variants and complex disease, in general, the association between genetic variants and a single phenotype is usually weak. It is increasingly recognized that joint analysis of multiple phenotypes can be potentially more powerful than the univariate analysis, and can shed new light on underlying biological mechanisms of complex diseases. Therefore, developing statistical methods to test for genetic association with multiple phenotypes has become increasingly important. …

Resource Optimization In Wireless Sensor Networks For An Improved Field Coverage And Cooperative Target Tracking, Husam Sweidan

Dissertations, Master's Theses and Master's Reports

There are various challenges that face a wireless sensor network (WSN) that mainly originate from the limited resources a sensor node usually has. A sensor node often relies on a battery as a power supply which, due to its limited capacity, tends to shorten the life-time of the node and the network as a whole. Other challenges arise from the limited capabilities of the sensors/actuators a node is equipped with, leading to complication like a poor coverage of the event, or limited mobility in the environment. This dissertation deals with the coverage problem as well as the limited power and …

Study Of The Cygnus Region With Fermi And Hawc, Andrew Robare

Dissertations, Master's Theses and Master's Reports

The Cygnus Cocoon is an extended source of high-energy gamma-ray emission in the Cygnus region. The gamma-ray emission has been attributed to a volume 50pc in diameter of freshly-accelerated particles near the Supernova Remnant γ Cygni which is located 1.4kpc from the solar system [Ackermann et al., 2011], [Tibaldo et al., 2013]. Since its discovery in 2011, Fermi LAT has improved their event reconstruction to allow analysis at higher energies, and recorded six additional years of data. An analysis was performed on the entire dataset to reproduce the previous results, then expand on them with higher energies and larger time …

Statistical Methods For Detecting Causal Rare Variants And Analyzing Multiple Phenotypes, Xinlan Yang

Dissertations, Master's Theses and Master's Reports

This dissertation includes two papers with each distributed in one chapter. To date, genome-wide association studies (GWAS) have identified a large number of common variants that are associated with complex diseases successfully. However, the common variants identified by GWAS only account for a small proportion of trait heritability. Many studies showed that rare variants could explain parts of the missing heritability. Since the well-developed common variant detecting methods are underpowered for rare variant association tests unless sample sizes or effect sizes are very large, investigation the roles of rare variants in complex diseases presents substantial challenges. In chapter 1, we …

Statistical Methods For Analyzing Multivariate Phenotypes And Detecting Rare Variant Associations, Huanhuan Zhu

Dissertations, Master's Theses and Master's Reports

This dissertation includes four papers with each distributed in one chapter.

In chapter 1, I compared the performance of eight multivariate phenotype association tests. The motivation to conduct this power comparison paper is as follows. For nearly 15 years, genome-wide association studies (GWAS) have been widely used to identify genetic variants associated with human diseases and traits. GWAS typically investigate genetic variants for a predefined phenotype, thus fail to identify weak but important effects. In recent years, many multivariate association tests have been developed. However, there is a lack of comprehensive summary of such kinds of approaches. To fill this …

Implementing Write Compression In Flash Memory Using Zeckendorf Two-Round Rewriting Codes, Vincent T. Druschke

Dissertations, Master's Theses and Master's Reports

Flash memory has become increasingly popular as the underlying storage technology for high-performance nonvolatile storage devices. However, while flash offers several benefits over alternative storage media, a number of limitations still exist within the current technology. One such limitation is that programming (altering a bit from its default value) and erasing (returning a bit to its default value) are asymmetric operations in flash memory devices: a flash memory can be programmed arbitrarily, but can only be erased in relatively large batches of storage bits called blocks, with block sizes ranging from 512K up to several megabytes. This creates a situation …

Nondestructive Evaluation Of Salvage White Spruce, Tyler Hovde

Dissertations, Master's Theses and Master's Reports

Knowledge of wood quality in dead standing trees is an important topic with recent increases in defoliation across North America. Obtaining wood quality information for defoliated trees would help stakeholders in the timber products industry sort and sell salvaged material for the highest possible value. This research investigates the ability to measure wood quality of white spruce (Picea glauca) after spruce budworm (Choristoneura fumiferana) attack using acoustic nondestructive evaluation. We compared stress wave velocities measured on standing trees to trees’ visual appearance. After harvest and processing of selected trees into bolts, standing-tree stress wave velocities were compared to bolt acoustic …

Application Of Seismic Radial Anisotropy For Near-Surface Fractures Identification, Jer-Yu Jeng

Dissertations, Master's Theses and Master's Reports

Fractures significantly control the groundwater flow and solute transport in geological settings of low-permeable rocks. Fractures also affect seismic wave propagation. For instance, they can create a directional dependence of seismic velocity with respect to their orientations, known as seismic anisotropy. Seismic radial anisotropy as used here is the difference between the velocity of a vertically polarized S-wave (SV) and one polarized horizontally (SH). In this thesis, seismic radial anisotropy was used to evaluate its usefulness for correlating with near-surface fractures. The seismic radial anisotropy models were obtained at two sites from dispersion analyses of the Rayleigh waves, with vertical …

Generalizable Modeling Of Charge Transport In Single Electron Transistor Devices: Application To Thermal Sensitivity In Semiconducting Island Systems, Paniz Khanmohammadi Hazaveh

Dissertations, Master's Theses and Master's Reports

Electronic devices, especially MOSFETs, have been dimensionally scaled down to enhance operation of integrated circuits, addressing challenges such as current leakage, fluctuation of intrinsic semiconductor properties, and power dissipation. Reaching dimensions below 20 nm, there are fundamental limitations that are difficult to overcome, driving alternative device paradigms to be sought utilizing the quantum mechanical behavior of electrons. Single electron transistor (SET) devices are examples of a new generation of low-power transistors designed to transport information via single electron tunneling through one or more islands separated by tunnel junctions. Experimentally explored SET devices have shown that there are advantages to using …

First-Principles Investigation Of The Interfacial Properties Of Boron Nitride, Kevin Waters

Dissertations, Master's Theses and Master's Reports

The interactions of nanomaterial surfaces with biological compounds, e.g. proteins, DNA, etc., unites the biological regime and nanomaterial world. Hybrid systems of boron-nitride nanotubes (BNNTs) and biological compounds are well-suited for a broad range of applications. First-principles methods are used to characterize the interface of these hybrid systems. Previous work has shown that the sensing capabilities of pristine BNNT are limited by long-ranged interactions. In this study the surfaces of pristine and functionalized BNNTs are investigated. The surfaces of the functionalized BNNTs give new properties to the tubes, which may enhance their sensing capabilities, while retaining their stability and chemical …

Magnetless And Topological Edge Mode-Based On-Chip Isolators And Spin-Orbit Coupling In Magneto-Optic Media, Dolendra Karki

Dissertations, Master's Theses and Master's Reports

The rapid growth of optical communication networks requires monolithic integration of various optical components such as lasers, modulators, detectors, amplifiers. Optical feedback due to reflected light at the interfaces of several components in a photonic circuit has detrimental effects to the normal operation of laser by increasing noise, forcing laser to oscillate into different lasing modes etc. So optical isolators are crucial components to make complex optical circuits possible by preventing the feedback signal from coupling back to the lasers sources. For this purpose, an optical isolator that can reduce the feedback signal by > 30 dB and at the same …

Disaster Risk In The Lake Nyos Area, Cameroon: Effects Of The Gas Hazard And Socially Produced Vulnerability, Mary Witucki

Dissertations, Master's Theses and Master's Reports

Effective disaster risk reduction (DRR) efforts depend on comprehensive risk assessments that consider potential hazard events and social vulnerability. The Lake Nyos Disaster (LND) caused the deaths of about 1,700 people, forced another 4,000 people from their homes, and left survivors more vulnerable to future hazards. There is considerable research on the gas hazard and some work on local vulnerability; however studies rarely consider both aspects of disaster risk (DR). This study addresses both the hazard and vulnerability and uses several qualitative and quantitative methods which have never been applied to LND survivor vulnerability or gas hazard. Interviews, participant observation, …

Wildfire Emissions In The Context Of Global Change And The Implications For Mercury Pollution, Aditya Kumar

Dissertations, Master's Theses and Master's Reports

Wildfires are episodic disturbances that exert a significant influence on the Earth system. They emit substantial amounts of atmospheric pollutants, which can impact atmospheric chemistry/composition and the Earth’s climate at the global and regional scales. This work presents a collection of studies aimed at better estimating wildfire emissions of atmospheric pollutants, quantifying their impacts on remote ecosystems and determining the implications of 2000s-2050s global environmental change (land use/land cover, climate) for wildfire emissions following the Intergovernmental Panel on Climate Change (IPCC) A1B socioeconomic scenario.

A global fire emissions model is developed to compile global wildfire emission inventories for major atmospheric …

Ground Deformation Studies And Evacuation Behavior During Eruptions At Guatemalan Volcanoes, Hans Lechner

Dissertations, Master's Theses and Master's Reports

Volcanic eruptions can be an especially problematic hazard when considering the uncertainty in eruption timing and magnitude coupled with challenges associated with delivering warnings to remote areas and facilitating effective evacuations. The hazards presented by Guatemala’s active volcanoes demand enhanced monitoring capabilities and instrumentation infrastructure. Strengthening the link between the physical and social sciences should lead to more accurate, reliable, and timely hazard information to the people living in proximity to the volcano and facilitate rational decisions and actions that reduce their level of risk. While there is no one single technique that can provide unambiguous diagnostics about the timing, …

The Abiotic Stress Response Of Hydroponic Vetiver Grass (Chrysopogon Zizanioides L.) To Acid Mine Drainage And Its Potential For Environmental Remediation, Jef Kiiskila

Dissertations, Master's Theses and Master's Reports

Mining activities can generate acid mine drainage (AMD), an acidic discharge that contains elevated sulfate (SO₄^2-), soluble metals, and orange-yellow metal-containing particulates. AMD imposes ecological risks from metal toxicity and physical stress, which may physically spread to nearby water sources or biologically through bioaccumulation. Current methods for AMD treatment, such as chemical or passive biological treatments, are often non-sustainable. Chemical treatments can be expensive and create large amounts of secondary waste, whereas biological treatments like anaerobic wetlands require continuous maintenance through input of organic nutrients. The end goal of this research is to develop a cost-efficient and …

Optimization And Control Of An Array Of Wave Energy Converters, Jianyang Lyu

Dissertations, Master's Theses and Master's Reports

This study explored optimal configuration of both the array layout and the dimension of each WEC in the array. The array contains heaving buoys with full interaction and exact hydrodynamics. Optimization of dimension was done on each WEC in the array with a given optimal layout, and a higher q-factor was achieved. Both impedance matching optimal control and derivative control were employed, which provides both theoretical maximum energy and a more realistic case. Then the work was expanded to optimization of both the array layout and the dimension of each WEC in the array. An average of 39.21% higher q-factor …

High Accuracy Methods And Regularization Techniques For Fluid Flows And Fluid-Fluid Interaction, Mustafa Aggul

Dissertations, Master's Theses and Master's Reports

This dissertation contains several approaches to resolve irregularity issues of CFD problems, including a decoupling of non-linearly coupled fluid-fluid interaction, due to high Reynolds number. New models present not only regularize the linear systems but also produce high accurate solutions both in space and time. To achieve this goal, methods solve a computationally attractive artificial viscosity approximation of the target problem, and then utilize a correction approach to make it high order accurate. This way, they all allow the usage of legacy code | a frequent requirement in the simulation of fluid flows in complex geometries. In addition, they all …

Analyzing The Life-Cycle Of Unstable Slopes Using Applied Remote Sensing Within An Asset Management Framework, El Hachemi Y. Bouali

Dissertations, Master's Theses and Master's Reports

An asset management framework provides a methodology for monitoring and maintaining assets, which include anthropogenic infrastructure (e.g., dams, embankments, and retaining structures) and natural geological features (e.g., soil and rock slopes). It is imperative that these assets operate efficiently, effectively, safely, and at a high standard since many assets are located along transportation corridors (highways, railways, and waterways) and can cause severe damage if compromised. Assets built on or around regions prone to natural hazards are at an increased risk of deterioration and failure. The objective of this study is to utilize remote sensing techniques such as InSAR, LiDAR, and …

Characterizing Cdom Spectral Variability From Seas To Space, Brice Grunert

Dissertations, Master's Theses and Master's Reports

Colored dissolved organic matter (CDOM) absorption varies significantly across the global oceans, presumably due to differences in source and degradation pathways. Tracking this variability on a global, or even regional, scale requires broad temporal and spatial sampling at high frequency. Satellite remote sensing provides this platform; however, current and near future sensors are/will be limited to measurements within the UV and visible wavelengths (> 350 nm) while most optical proxies estimating CDOM composition, and relevant for understanding largescale biogeochemical processes, use wavelengths less than 350 nm. This dissertation examines global variability in CDOM spectral variability utilizing a variety of optical …

Probing The Precambrian Geodynamo: Analysis Of The Geomagnetic Field Behavior And Calibration Of Pseudo-Thellier Paleointensity Method For Mesoproterozoic Rocks, Marine Foucher

Dissertations, Master's Theses and Master's Reports

Understanding the geomagnetic field direction and strength (e.g., paleomagnetism and paleointensity, respectively) recorded by Precambrian rocks is essential to obtain insight into the nature and evolution of the Earth’s early geodynamo and for constraining models of planetary evolution. Major milestones of our planet’s history, such as beginning of plate tectonics, development of the atmosphere and life, took place during the first four billion years. However, the available data on the Earth’s magnetic field in the Precambrian are very limited, especially the information about the field intensity which represents one of the most challenging aspect of paleomagnetic research. Many Precambrian rocks …

Probing Quantum Transport In Three-Terminal Nanojunctions, Meghnath Jaishi

Dissertations, Master's Theses and Master's Reports

One-dimensional (1D) nanoscale systems—structures with the lateral dimensions ranging from 1 nm to 100 nm — have received significant research interest due to their unique structure-guided properties that promise functionalities far more superior than their bulk counterparts. The quantum confinement effect in 1D nanostructures provides us with a very powerful tool to tune their electrical, magnetic, optical and thermal properties and opens the gateway for their multifunctional usages in next-generation electronics. In particular, carbon nanotubes and semiconductor nanowires are found to offer tremendous opportunities to form the junction devices with controlled electronic and optoelectronic properties crucial to predictable device functions. …

Offline And Online Density Estimation For Large High-Dimensional Data, Aref Majdara

Dissertations, Master's Theses and Master's Reports

Density estimation has wide applications in machine learning and data analysis techniques including clustering, classification, multimodality analysis, bump hunting and anomaly detection. In high-dimensional space, sparsity of data in local neighborhood makes many of parametric and nonparametric density estimation methods mostly inefficient.

This work presents development of computationally efficient algorithms for high-dimensional density estimation, based on Bayesian sequential partitioning (BSP). Copula transform is used to separate the estimation of marginal and joint densities, with the purpose of reducing the computational complexity and estimation error. Using this separation, a parallel implementation of the density estimation algorithm on a 4-core CPU is …

Intelligent And Secure Underwater Acoustic Communication Networks, Chaofeng Wang

Dissertations, Master's Theses and Master's Reports

Underwater acoustic (UWA) communication networks are promising techniques for medium- to long-range wireless information transfer in aquatic applications. The harsh and dynamic water environment poses grand challenges to the design of UWA networks. This dissertation leverages the advances in machine learning and signal processing to develop intelligent and secure UWA communication networks. Three research topics are studied: 1) reinforcement learning (RL)-based adaptive transmission in UWA channels; 2) reinforcement learning-based adaptive trajectory planning for autonomous underwater vehicles (AUVs) in under-ice environments; 3) signal alignment to secure underwater coordinated multipoint (CoMP) transmissions.

First, a RL-based algorithm is developed for adaptive transmission in …

Evaluating The Effectiveness Of Current Atmospheric Refraction Models In Predicting Sunrise And Sunset Times, Teresa Wilson

Dissertations, Master's Theses and Master's Reports

The standard value for atmospheric refraction on the horizon of 34', used in all publicly available sunrise and sunset calculators, is found to be inadequate. The assumptions behind atmospheric models that predict this value fail to account for real meteorological conditions. The result is an uncertainty of one to five minutes in sunrise and sunset predictions at mid-latitudes (0° - 55° N/S). A sunrise/set calculator that interchanges the refraction component by varying the refraction model was developed. Two atmospheric refraction models of increasing complexity were tested along with the standard value. The predictions were compared with data sets of observed …

Application Of Remote Sensing And Machine Learning Modeling To Post-Wildfire Debris Flow Risks, Priscilla Addison

Dissertations, Master's Theses and Master's Reports

Historically, post-fire debris flows (DFs) have been mostly more deadly than the fires that preceded them. Fires can transform a location that had no history of DFs to one that is primed for it. Studies have found that the higher the severity of the fire, the higher the probability of DF occurrence. Due to high fatalities associated with these events, several statistical models have been developed for use as emergency decision support tools. These previous models used linear modeling approaches that produced subpar results. Our study therefore investigated the application of nonlinear machine learning modeling as an alternative. Existing models …

Investigating Midair Virtual Keyboard Input Using A Head Mounted Display, Jiban Krishna Adhikary

Dissertations, Master's Theses and Master's Reports

Until recently text entry in virtual reality has been limited to using hand-held controllers. These techniques of text entry are feasible only for entering short texts like usernames and passwords. But recent improvements in virtual reality devices have paved the way to varied interactions in virtual environment and many of these tasks include annotation, text messaging, etc. These tasks require an effective way of text entry in virtual reality. We present an interactive midair text entry system in virtual reality which allows users to use their one or both hands as the means of entering text. Our system also allows …

Novel Faraday Rotation Effects Observed In Ultra-Thin Iron Garnet Films, Brandon Blasiola

Dissertations, Master's Theses and Master's Reports

Recent work performed by A. Chakravarty and M. Levy showed experimentally a dramatic increase in the specific Faraday Rotation (FR) of the iron garnet Bi_0.8Lu_0.2Gd₂Fe₅O₁₂. A theoretical model, based purely on classical electrodynamics, attempting to explain this behavior was developed by colleagues in Russia that not only confirmed the asymptotic increase in the specific FR at sub-50nm film thicknesses but also suggested that the specific FR should exhibit significant fluctuations at sub-500 nm film thicknesses. The original data points were widespread with steps of 50 nm or more between data …