Physical Sciences and Mathematics Commons^™

Syntheses, Structures And Magnetic Properties Of Cyano-Bridged Transition Metal Compounds, Uma Prasad Mallik

Dissertations

To investigate the hypotheses, that systematically changing the electronic and relative sizes of tricyanido building blocks will tune magnetic properties of their cluster derivatives, we prepared two new tricyanido pyrazolylborate complexes, [NEt₄][(Tp*^Me)­Fe(CN)₃]­·H₂O and [NEt₄]­[(Tp^*Bn)­Fe^III(CN)₃]­·H₂O·MeOH, and investigated their self-assembly. The new building blocks were prepared, structurally characterized, and their coordination chemistry explored to prepare small molecule-based magnetic materials.

Three bent trinuclear ferromagnetic cluster derivatives of {[(Tp^*Me)­Fe^III(CN)₃]_2­[Ni^II(L)₂]}·n(solvent) [L = …

The Synthesis And Characterization Of Photoluminescent Conjugated Frameworks Containing Silicon And Germanium, Douglas William Hammerstroem

Dissertations

Siloles and 9-heterofluorenes (Si, Ge) are conjugated π-electron systems containing Group 14 atoms which demonstrate unique properties such as high electron affinity, mobility, and bathochromically shifted optical spectra relative to their all-carbon analogs. This is due to their low-lying lowest-unoccupied molecular orbital (LUMO) which is resultant of the σ*-π* conjugation between the exocyclic groups at the Group 14 center and the butadiene unit of the ring. As a consequence, they have received considerable attention for their use as components for a wide variety of optical and electronic applications such as organic light emitting diodes (OLEDs), photovoltaic devices, field-effect transistors (FETs), …

Development Of An Hplc-Based Oligosaccharide Synthesizer, Salvatore Pistorio

Dissertations

Carbohydrates are the most abundant molecules on Earth. They are involved in a wide range of fundamental biological processes: anti-inflammation, immune response, joint lubrication, cell growth, antigenic determination. Carbohydrates are also held responsible for many damaging cellular processes, such as bacterial and viral infections, development of tumors, etc.. Therefore, the development of effective methods for the synthesis of complex carbohydrates has become a critical area of glycosciences. One challenge that stands out is the stereocontrol in the synthesis of glycosidic bonds, the linkage that serves as the only means to connect simple monosaccharides into complex oligomeric networks. Beyond this, the …

In Vivo And In Vitro Studies Of Polyamides That Are Active Antiviral Agents Against Hpv16, Edith Csiki-Fejer

Dissertations

Long-term, persistent infection with high-risk strains of human papillomavirus (HPV) is the precursor of most cervical cancers and an increasing number of the head and neck cancers. While HPV vaccines can protect patients under twenty-five years old from possible infections, no HPV antiviral drugs are available for the definitive treatment of preexisting or future viral infections. To treat current or future HPV infections, drugs that selectively block virus-specific processes, but do not damage the host cells, are needed. The compounds developed in our group are unique Imidazole-pyrrole polyamides, analogs of natural products Distamycin A and Netropsin that function by interfering …

Synthesis And Characterization Of Amphiphiles For Mammalian Cell Transfection And Antimicrobial Activity, Joseph William Meisel

Dissertations

Amphiphiles are molecules that contain both water-soluble and water-insoluble components. The dual nature of these molecules engenders remarkable properties including the ability to self-assemble into ordered structures. Cell membranes are composed of amphiphilic phospholipids that organize into a bilayer motif. Synthetic amphiphiles can interact with natural membranes and influence the transport of molecules across the cell membrane. The work elaborated in this report employs amphiphiles to co-assemble with DNA and transport the genetic material across cell membranes. First, a simplified method for interacting DNA with amphiphiles was developed. Second, a series of known ion-transporting compounds were assayed for their interaction …

Study Of Vaporization Enthalpies And Vapor Pressures Of Potential Environmental Pollutants By Correlation-Gas Chromatography, Chase Patrick Gobble

Dissertations

The focus of this dissertation is on the measurement and analysis of thermodynamic data, including vaporization, fusion, and sublimation enthalpies and vapor pressures of dialkyl phthalates, as well as aliphatic and aromatic primary and tertiary amines by correlation gas chromatography (CGC). These compounds are important industrial and pharmaceutical substances whose prolonged use and sometimes misuse with regards to their disposal has created an environmental concern. Thermodynamic properties, such as vaporization enthalpy and vapor pressure provide crucial information to numerous industries and fields of study that include the chemical and petrochemical industry, chemical engineering and environmental science. Dialkyl phthalates are essential …

Templated Oligosaccharide Synthesis, Jia Guang Xiao

Dissertations

Glycosyl transfer within the active site of an enzyme involves the arrangement of the gly-cosyl donor and glycosyl acceptor in close proximity to each other. To mimic this pro-cess, intramolecular glycosylations are carried out where the donor and acceptor are linked together via a spacer. Correct orientation, rigidity and position of the spacer play a vital role in the selectivity and yield of reactions in this “molecular clamp method”. Though current methodologies show promising results in terms of yield and selectivity, the need to synthesize different complexes to ensure selectivities in all types of glycosidic linkages is a large deterrent …

Synthesis Of Cyclic Enolphosphonates And Enolphosphates As Inhibitors Of Serine Hydrolases, Benjamin Patrick Martin

Dissertations

Cyclophostin is a potent naturally occurring inhibitor of acetylcholinesterase with a novel bicyclic enolphosphate structure. The cyclipostins are a family of potent hormone-sensitive lipase inhibitors which share the same bicyclic enolphosphate core structure with cyclophostin which but differ primarily in that they are long-chain alkyl phosphate esters whereas cyclophostin is a methyl phosphate ester. Due to the novelty of the inhibitor structure, potency, and ability to select between two serine hydrolase enzymes with a simple change in the ester substituent, the ongoing structure activity relationship investigation of this family of inhibitors was continued. Methods of transesterification were investigated in order …

Binding Properties Of Large Antiviral Polyamides (Pa1 And Pa25) And Natural Product Derivatives As Inhibitors Of Serine Hydrolases, Elena Vasilieva

Dissertations

Polyamides are a class of DNA minor groove binders that were developed from the natural product Distamycin A. PA25 (20-ring PA) showed better activity (3-fold) in the elimination of HPV16 episomes than PA1 (14-ring PA). Binding studies of PA1 and PA25 were performed in the long control region of HPV16 (7348-122 bp). PA1 showed similar binding affinity to perfect match and single mismatch binding sites. PA1 bound to double, triple, and quadruple mismatch sites with lower affinity. PA25 bound with similar binding affinity to perfect through triple mismatch binding sites. PA25 bound quadruple mismatch sites and nonspecifically. Therefore, it was …

Applications Of Nanoporous Gold Monoliths As Substrates For The Capture And Release Of Lectins And Glycoproteins, Allan Jonson Alla

Dissertations

Nanoporous gold (np-Au) monoliths are a free-standing nanostructured material with typical pore dimensions in the tens of nanometers range. The microstructure of np-Au resembles those of macroporous monolithic materials being used in chromatographic separations. The surfaces of np-Au monoliths were modified via flow methods with different ligands to develop affinity substrates for separations. A carbohydrate-modified np-Au monolith was prepared by immobilizing thiolated saccharides and further used to separate lectins. The np-Au monolith surface was also functionalized with self-assembled monolayers (SAMs) of α-lipoic acid (LA) followed by activation of carboxyl terminal groups to create amine reactive esters. Concanavalin A (Con A) …

Development Of The Regenerative Glycosylation Approach For Manual And Automated Oligosaccharide Synthesis, Swati Sudhir Nigudkar

Dissertations

It has been recognized that carbohydrates are involved in all phases of life beginning with the embryonic development and cell growth. However, it is the involvement of carbohydrates in the progression of various deadly diseases that gave these natural compounds significant roles in diagnostics and as pharmaceuticals. Although carbohydrates are highly desirable to the biological and medical communities, these molecules are still very challenging targets for chemists. Functionalization, derivatization, controlling anomeric stereoselectivity, purification, and characterization are all existing experimental hurdles towards producing synthetic carbohydrates in large quantities and high purity. Advances in chemistry and biochemistry have certainly facilitated the synthesis …

Soluble Amyloid-Beta 42 Aggregates Stimulate Cellular Inflammation Independent Of Cd47, Sanjib Karki

Dissertations

Alzheimer’s disease (AD) is a neurodegenerative disease characterized by the accumulation and deposition of aggregated amyloid-β protein (Aβ). Most of the studies indicate that Aβ1-42) and Aβ(1-40) play an important role in the neurodegenerative pathology in AD. A critical component of AD pathology is inflammation, which results from the activation of glial cells around the Aβ deposits. The goal of my dissertation research was to determine the role of Aβ aggregation in microglia-triggered inflammation and identify cellular components that mediate the inflammatory response. CD47 is a cellular receptor found on the microglia surface and it has been proposed to have …

Picolinyl-Assisted Approaches To Stereocontrolled Glycosylation, Jagodige Prithika Yasomanee

Dissertations

Although carbohydrates are the most abundant molecules on Earth, our current knowledge of these fascinating natural compounds is still limited. Some aspects that are already known include the carbohydrate involvement in damaging cellular processes such as bacterial and viral infections, development of tumors, metastasis, septic shock, etc. Consequently the development of effective methods for the synthesis, isolation, analysis, and investigation of complex carbohydrates has become critical in all areas of glycoscience. Among various focus areas, stereocontrolled glycosylation has emerged as a topic of particular importance. Yet, it remains a remarkable challenge to chemists because a new chirality center is formed …

Understanding Mechanistic Details Of Neuroinflammatory Pathways Stimulated By The Alzheimer's Disease Amyloid-Beta Protein, Shana Usery

Dissertations

Alzheimer’s disease (AD) is characterized by neuroinflammation. Senile plaques composed of aggregated amyloid-β protein (Aβ) are found in AD patients’ brains. The Aβ is formed by the proteolytic cleavage of the amyloid precursor protein (APP) resulting in Aβ fragments that are 39-42 amino acids in length. The two most common peptides are Aβ(1-40) and Aβ(1-42), which differ by two amino acids, isoleucine and alanine. Within the brain of AD patients, Aβ monomer self-assembles to form several aggregate morphologies, including oligomers, protofibrils, and fibrils. Activated microglial cells and associated secreted proinflammatory cytokines surround these plaques producing a localized inflammatory environment in …

Fast And Sensitive Genome-Hashing Software And Its Application In Using Ngs As A Detection Agent For Bacterial Presence In Oral Metagenomic Samples, Paul Michael Gontarz

Dissertations

Next generation sequencing has increased the throughput of sequenced DNA into the range of billions of nucleotides sequenced per day. With the increased speed of DNA sequencing and the short length of reads produced by next generation sequencers, a significant challenge has been created in quickly and accurately assembling the hundreds of millions of short reads created by modern sequencing instruments into their full genomic sequences. With the increase in throughput in next generation sequencing and the decrease in time and cost to perform DNA sequencing, novel applications for DNA sequencing are being considered. Among them is a methodology by …

Electrochemical Synthesis Of Nanostructured Noble Metal Films For Biosensing, Jay Kishan Bhattarai

Dissertations

Nanostructures of noble metals (Au and Ag) are of interest because of their important intrinsic properties. Noble metals by themselves are conductive, physically robust, chemically inert, and strongly bind to thiols. However, when the nanostructures are formed, they in addition possess high surface area and unique optical properties tunable by adjusting the shape and size. All of these properties make nanostructures of noble metals suitable candidates to be used as a transducer for biosensing. Individual nanostructures might be easier to prepare but difficult to handle to be used as a transducer. Therefore, we prepared and analyzed nanostructured films/coating of noble …

New Methods And Strategies For Orthogonal Oligosaccharide Synthesis, Scott James Hasty

Dissertations

Although scientists have been able to isolate certain classes of naturally occurring carbohydrates, the overall availability of pure natural isolates remains inadequate. As a result, chemical synthesis has been employed to access complex carbohydrates. Unfortunately, traditional oligosaccharide synthesis often requires laborious protecting-group manipulations that results in lower yields. Expeditious strategies effectively shorten the task of oligosaccharide assembly by minimizing the need for protecting-group manipulations between glycosylation steps, or even purification of the intermediates. Additionally, prediction of the stereoselective outcome of the coupling reaction between two sugar units is a major obstacle facing carbohydrate chemists. It is well known that 1,2-trans …

Design And Synthesis Of Chelating Compounds And Solid-Supported Chelators For Metal Depleted Solutions, Surendra Dawadi

Dissertations

Metals are essential to life, yet they can be toxic for biological systems when present in excessive amounts. The major source of metal overload in humans is diet; and in some cases, intravenous feeding. Thus the removal of toxic metal ions from contaminated clinical products such as total parenteral nutrition (TPN) solutions, and drinking and waste water is extremely important. The use of chelating resins, which are polymeric solids containing covalently immobilized chelating compounds, for the selective removal of metal ions from contaminated solutions has been conceptualized long ago. Herein, the design and synthesis of metal specific chelating compounds and …

Chemistry And Thermochemistry Of Selected Fatty Acids Using Correlation Gas Chromatography, Joe A. Wilson

Dissertations

Correlation gas chromatography (c-GC) is a special application of the gas chromatography technique and is used for the evaluation of both vaporization enthalpy and vapor pressures of organic compounds. Its use in measuring vaporization enthalpies has been extensively documented. This method is useful for measurements of both liquids and solids. For substances that are solids, since each analyte is dilutely adsorbed on the condensed phase of the gas chromatographic column, it is not crystalline. The vapor pressure that it exhibits behaves as an excellent model of the sub-cooled liquid as demonstrated by various thermochemical cycles. Thermochemical measurements are important to …

Nanoporous Gold Characterization, Structural Modification And Use As A Solid Support For Biomolecule Immobilization, Abeera Sharma

Dissertations

Nanoporous gold (NPG) has immense technological applications owing to a plethora of properties like large surface area to volume ratio, plasmonic properties, stable gold-thiolate bond formation and a wide range of pore sizes. The surface morphology of nanoporous gold has been altered previously by dealloying and thermal annealing to increase/decrease the pore size and change the surface area. We provide a novel electrochemical annealing technique for post dealloying modification wherein electrochemical sweep cycles in different electrolytes at positive potentials leads to a subsequent increase in pore sizes of nanoporous gold as studied using scanning electron microscopy. Tailoring the surface of …

Glycosyl Thiocarbamates As New Building Blocks For Chemical Glycosylation, Sneha Chandrashekhar Ranade

Dissertations

Having multiple functions in biological systems e.g. fertilization, blood group determination, cell growth; carbohydrates have remained attractive subjects for the study. They are also involved in various life threatening biological processes, such as viral and bacterial infections, tumor development, etc. Understanding of these involvements/interactions of carbohydrates in such critical processes is essential for the development of carbohydrate based vaccines and therapeutics. Although carbohydrates are present abundantly in nature, their isolation is cumbersome and low yielding, which is why, the synthesis of carbohydrate units has been of interest to many scientists. Efforts have been made to make these synthetic methods more …

Application Of Iron Complexes As Catalysts In C-O And C-C Bond Forming Reactions, Pushkar Sudhakar Shejwalkar

Dissertations

‘Green Chemistry’ is a philosophy that encourages chemists in research and industry to reduce toxic waste for cleaner and safer chemical production. Oxidation reactions are commonly used in industry and are traditionally achieved by methods that involve toxic metals (such as chromium) and solvents, generating considerable waste compared to the value of the final product. The Mukaiyama Aldol reaction is another organic reaction that utilizes metals as Lewis acid catalysts. The principles of Green Chemistry suggest that chemical reactions should be performed with a maximum of efficiency and with a minimum of side product formation, accompanied by a minimal use …

Siloles Bearing Coordination-Active 2,5-Substituents: Synthesis, Reactivity, Structural And Spectral Properties., James Bryan Carroll

Dissertations

Siloles, or silacyclopentadienes and other group 14 metalloles are structurally analogous to their all-carbon analogue, cyclopentadiene, except for the heavy group 14 element (i.e., Si, Ge, Sn, and Pb) in the 1-position. The placement of the heavy element in this position allows for unique properties, such as high electron affinity, mobility, and bathochromically shifted optical spectra, as compared to cyclopentadienes, and the relatively low-lying lowest-unoccupied molecular orbital (LUMO) helps to account for these properties. The substituents about the silole have a significant impact on the electronics and properties observed, with 2,5-substituents inducing the most substantive changes. Even as many 2,5-substituents …

The Investigation Of Iron(Ii) Complexes And Their Catalytic Applications, Matthew Joseph Lenze

Dissertations

Several new η5-indenyl (Ind) complexes of iron featuring phosphinooxazoline (PHOX) ligands were synthesized and spectroscopically characterized and in a few cases structurally. The complexes were synthesized using phosphinooxazoline ligands and the corresponding iron precursor [Fe(η5-Ind) I(CO)2], yielding novel piano-stool iron complexes of the general formula [Fe(η5-Ind)(CO)(PHOX)]+ in 73% to 81% isolated yields. The complexes were tested for their efficacy in a carbon-carbon bond formation known as the Mukaiyama aldol reaction. The [Fe(η5-Ind)(CO)(PHOX)]+ complexes were capable of activating the carbonyl of aromatic aldehydes towards by attack 1-(tertbutyldimethylsilyloxy)-1-methoxyethene to form the expected silyl protected β-hydroxyesters. In these complexes, the η5-η3 haptotropic shift …

Synthesis And Characterization Of Luminescent Cyclic Germanium Compounds, Teresa Lynn Bandrowsky

Dissertations

The vision in the field of organic electronics is the realization of flexible, easily manufactured, low cost optoelectronics for use in organic light emitting diodes (OLEDs) for large area displays and lighting applications, organic photovoltaic cells, and organic field-effect transistors. The active layers within such devices are composed of semiconducting small molecules or polymers. The rich chemistry of new π-conjugated materials holds the key to continued progress by allowing the material properties of organic semiconductors to be readily tuned towards application specific demands. At the core of this subject matter is how to modify the electronic structures of π-conjugated molecules …

Microglial Activation By Amyloid-Beta, Geeta Subhash Paranjape

Dissertations

Paranjape, Geeta S.,Ph.D.,University of Missouri-Saint Louis, May 2012. Aβ(1-42) Protofibrils But Not Fibrils Activate Microglia. Major Professor: Michael R. Nichols. One of the hallmark features of the Alzheimer’s disease (AD) brain is the extracellular deposition of amyloid-β protein (Aβ) in both fibrillar (senile plaques) and diffuse forms. Significant proinflammatory markers including activated microglia and cytokines have been detected surrounding the plaques but are absent in diffuse areas suggesting that microglial activation is sensitive to Aβ structure. Since Aβ displays structural polymorphism in vitro, we sought to determine the relationship between Aβ aggregation state and microglial proinflammatory response. Size exclusion chromatography …

Nanoporous Gold As A Solid Support For Protein Immobilization For The Development Of Immunoassays, And For Biomolecular Interaction Studies, Binod Prasad Pandey

Dissertations

Nanoporous gold (NPG) is a versatile material of high surface area to volume ratio that can be readily modified with self-assembled monolayers of alkanethiols to which biomolecules can be linked. NPG presents new opportunities for the development of immunoassays, and for the development of carbohydrate based assays. This thesis explores the use of NPG as a support for self-assembled monolayers, their linkage to antibody-enzyme conjugates for immunoassay development, and for the study and application of carbohydrate-protein interactions. Direct kinetic electrochemical immunoassays were developed on NPG for prostate specific antigen (PSA) and carcinoembryonic antigen (CEA). The decrease in enzymatic conversion of …

Synthesis And Catalytic Applications Of Platinum(Ii) And Palladium(Ii)-Pta And Dapta Complexes, Sitaram Acharya

Dissertations

The cage-like tertiary phosphine, 1,3,5-triaza-7-phosphaadamantane (PTA) has recently received interest because of its water-solubility, air-stability, non-ionic, non-surfactant, and basic nature. These properties can solubilize transition metal complexes in the aqueous phase. A related air-stable derivative, N,N’-diacetyl-1-3-5-triaza-7-phosphaadamantane (DAPTA) has greater water-solubility than PTA, however, its coordination chemistry has not been significantly explored. This study involved the synthesis and characterization of a series of novel air-stable and water-soluble four-coordinated dialkyl, dialkynyl, dihalo, and halo(alkyl) complexes of platinum and palladium bearing PTA and DAPTA ligands. The alkyl complexes of the type MX(R)P2 (M = Pt, Pd; X = Cl, Br, I; R = …

Nickel Catalyzed Homoallylation Reactions And Synthesis Of Potent Inhibitors Of Yoph, Mahesh Prasad Paudyal

Dissertations

Amphidinolides are cytotoxic natural products isolated from marine dinoflagellate Amphidinium species. Amphidinolides C, C2 and F are active against cancer cell lines. Homoallylation of aldehydes with isoprene and triethylborane catalyzed by Ni(acac)2 gave hydroxyalkenes in good yield with excellent regio- and stereoselectivity. Cross metathesis of the hydroxyalkenes with methyl acrylate using second-generation Grubbs catalyst and copper(I) iodide afforded α,β-unsaturated esters, which underwent cyclization in the presence of DBU to produce tetrahydrofurans with the correct relative configuration for the C1-C9 fragment of amphidinolides C, C2, and F. Homoallylation of chiral and achiral diene carboxylate esters and dienecarboxamides with various aldehydes were …

Studies Toward Tetrahydrofuran-Containing Natural Products: Total Synthesis Of Amphidinolide C And Oxylipids, Sudeshna Roy

Dissertations

Tetrahydrofurans (thf) and tetrahydropyrans (thp) are important structural motifs found in a broad array of biologically relevant natural products such as polyether antibiotics and acetogenins. Classic methods used for thf- or thp-ring synthesis have their own advantages and disadvantages which tend to be substrate specific. Therefore, development of new and efficient methods is imperative especially to address the issue of diastereoselectivity when attainment of both cis- and trans-2,5-thf (or 2,6-thp) is highly desirable. Herein, a strategy of cross-metathesis and Pd(0)-catalyzed cyclization, useful for obtaining both cis- and trans-2,5-disubstituted thf (or 2,6-disubstituted thp), will be discussed along with its application in …