Plant Biology Commons^™

The Future Of The Big Sagebrush Ecosystem: Plant Community Response To Grazing, Wildfire, And Invasive Annual Grass In A Changing Climate, Margaret Eleanor England

Theses, Dissertations and Capstones

Climate change is increasingly affecting the plant communities across the world. In the Western United States, these changes are affecting plant communities and their risk of invasive species, as well as the frequency and severity of wildfire. Big sagebrush (Artemisia tridentata Nutt.) ecosystems of the Western United States are facing threats of increasingly frequent wildfire and invasion of the annual grass cheatgrass (Bromus tectorum L.), which may be exacerbated by global climate change. Past studies have found cheatgrass to exhibit a positive feedback loop with wildfire, and climate change is expected to facilitate expansion of the cheatgrass …

Environmental Gradients Impact Key Leaf Traits In Riparian Trees, Amanda Malone

Electronic Theses and Dissertations

Specific leaf area (SLA) reflects a plant’s carbon investment per area and relates to generalized leaf economics spectrum growth strategies (LES). To fill gaps of knowledge about intraspecific SLA variation and why it is often inconsistent with the LES, we studied the response of two riparian tree species along the urban-rural gradient in Northeastern Colorado: an invasive, nitrogen-fixer with broad tolerances and a nitrogen-limited and shade-intolerant native. Despite these differences, the two species responded similarly, apart from the response to the urban-rural gradient, in which lower nitrogen in rural areas was associated with a more conservative strategy in the native …

Genome-Wide Identification Of Wrky Transcription Factor Encoding Genes In Amborella Trichopoda Baill. (Amborellaceae), Bijaya Pradhan

Electronic Theses and Dissertations

WRKY transcription factors (TFs) are DNA-binding proteins, which play important roles in managing plant stresses and regulating growth and development processes. The WRKY TF family has expanded significantly through genome/gene duplications in the plant evolutionary process. Although the WRKY TFs have been identified in hundreds of plant species, they are yet to be identified in Amborella trichopoda, a species that represents the most basal group of Angiosperms. The main objectives of this study were to conduct genome-wide identification of the WRKY gene family in A. trichopoda and to assess their homologs in Angiosperms. In this study, we identified …

Callery Pear Removal Experiment: Trees-Intact (Medlar Conservation Area), Margaret E. Maloney, Eric B. Borth, Grace Dietsch, Mary C. Lloyd, Ryan W. Mcewan

Five Rivers MetroParks Collaboration Data Archive

The invasive tree Callery pear (Pyrus calleryana) is problematic in open habitats in the American Midwest. We investigated the efficacy of various control techniques on P. calleryana invasion in grasslands. Treatments were applied to P. calleryana stems that were single-stemmed trees (around 7 years; n = 40 stems), and response of those stems was measured.

Callery Pear Removal Experiment: Trees-Sprouting (Stillwater Conservation Area), Margaret E. Maloney, Eric B. Borth, Grace Dietsch, Mary C. Lloyd, Ryan W. Mcewan

Five Rivers MetroParks Collaboration Data Archive

The invasive tree Callery pear (Pyrus calleryana) is problematic in open habitats in the American Midwest. We investigated the efficacy of various control techniques on P. calleryana invasion in grasslands. Treatments were applied to P. calleryana stems that had experienced mowing annually for several years and were sprouting (n = 100 stems) and response of those stems was measured.

The Effects Of Average Annual Temperature On Flowering Times And Flower Count, Angela Copploe

Williams Honors College, Honors Research Projects

Over a course of 15 years, three different species of flowers were examined to see the relationship between the increase in average annual temperature, flowering time, and flower count.

Getting To The Root Cause: The Genetic Underpinnings Of Root System Architecture And Rhizodeposition In Sorghum, Farren Smith

Graduate Theses, Dissertations, and Problem Reports (ETD)

Plants are some of the most diverse organisms on earth, consisting of more than 350,000 different species. To understand the underlying processes that contributed to plant diversification, it is fundamental to identify the genetic and genomic components that facilitated various adaptations over evolutionary history. Most studies to date have focused on the underlying controls of above-ground traits such as grain and vegetation; however, little is known about the “hidden half” of plants. Root systems comprise half of the total plant structure and provide vital functions such as anchorage, resource acquisition, and storage of energy reserves. The execution of these key …

Degradation And Nitrogen Cycling In The Context Of Biodiversity-Ecosystem Function Relationships In The Inquiline Bacterial Community Of Darlingtonia Californica, Megan Teigen

Cal Poly Humboldt theses and projects

Biodiversity-ecosystem function (BEF) research aims to explain how species and their environments interact with each other. Microbial communities engage in vital biogeochemical pathways in a variety of natural ecosystems, and yet there are large knowledge gaps about the specific metabolic pathways in which they are involved. Degradation specifically contributes to nitrogen cycling globally through the breakdown of large organic nitrogen compounds into small inorganic nitrogen that is necessary for the survival of many other organisms. In this study, I focused on the degradative function of the inquiline microbial communities found within the carnivorous pitcher plant, Darlingtonia californica. Darlingtonia grows in …

Documenting The Rapidly Expanding Distribution Of Invasive Ravenna Grass (Tripidium Ravennae) Eastern In Kansas, Rachel A. Styers

Electronic Theses & Dissertations

Invasive species cause significant ecological losses in the United States where they cost approximately $21 billion dollars a year to manage (Fantle-Lepczyk et al., 2022). Early detection of new invasive species, coupled with a rapid response of management efforts, can help to slow the ecological and economic impacts caused by these habitat invaders. Tripidium ravennae (L.) H. Scholz (or Ravenna grass) is a tall, robust, cespitose grass known to occur in Kansas, although its distribution remained poorly documented prior to this study. Given its known invasive tendencies, it has been declared noxious in at least six US states. Coupled with …

Biol 1411- Botany Laboratory Manual, Yolander R. Youngblood

Open Education Resources

Botany Laboratory Manual By – Yolander R.Youngblood, PhD.

This manual was reviewed by student editors, Ayanna Montegut and Ineceia Carter.

Table of Contents

1. The Plant Cell Lab

2. Mitosis Lab

3. Plant Growth and Development Lab

4. Simple Tissue Lab

5. Leaf Lab

6. Stem Lab

7. Root Lab

8. Evolution of Land Plants Lab

9. Bryophyte Lab

10. Fern Lab

11. Gymnosperm Lab

12. Angiosperm Lab

13. Appendix

a. Writing in the Scientific Notebook

b. How to use the Microscope

c. Plants and Their Structure

d. Additional Video, Lecture, and Lab Resources

Above- And Below-Ground Functional Trait Coordination In The Neotropical Understory Genus Costus, Eleinis Ávila-Lovera, Gregory R. Goldsmith, Kathleen M. Kay, Jennifer L. Funk

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The study of plant functional traits and variation among and within species can help illuminate functional coordination and trade-offs in key processes that allow plants to grow, reproduce and survive. We studied 20 leaf, above-ground stem, below-ground stem and fine-root traits of 17 Costus species from forests in Costa Rica and Panama to answer the following questions: (i) Do congeneric species show above-ground and below-ground trait coordination and trade-offs consistent with theory of resource acquisition and conservation? (ii) Is there correlated evolution among traits? (iii) Given the diversity of habitats over which Costus occurs, what is the relative contribution of …

Salicylic Acid: A Key Regulator Of Redox Signalling 1 And Plant Immunity, Mohd Saleem, Qazi Fariddudin, Christian Castroverde

Biology Faculty Publications

In plants, the reactive oxygen species (ROS) formed during normal conditions are essential in regulating several processes, like stomatal physiology, pathogen immunity and developmental signaling. However, biotic and abiotic stresses can cause ROS over-accumulation leading to oxidative stress. Therefore, a suitable equilibrium is vital for redox homeostasis in plants, and there have been major advances in this research arena. Salicylic acid (SA) is known as a chief regulator of ROS; however, the underlying mechanisms remain largely unexplored. SA plays an important role in establishing the hypersensitive response (HR) and systemic acquired resistance (SAR). This is underpinned by a robust and …

The Effects Of Ppal-1 In Arabidopsis Gamete Development, Amanda J White, Susana Perez-Martinez, Mark P. Running

The Cardinal Edge

Prenylation is a type of post-translational modification in which a 15- or 20-carbon lipid is added to the carboxyl (C) terminus of the protein. Arabidopsis thaliana contains the PROTEIN PRENYLTRANSFERASE ALPHA SUBUNIT-LIKE (PPAL) gene, which encodes a protein with homology to the α-subunits of the three known prenylation enzymes, PFT, PGGT, and Rab-GGT. We previously identified two mutations in PPAL, one of which is ppal-1, which contains a T-DNA insertion in the fourth intron. We have previously observed that self-fertilizing heterozygous ppal-1 plants produce progeny in which homozygous ppal-1 is underrepresented. This project attempts to ascertain …

Mutations In Several Auxin Biosynthesis Genes And Their Effects On Plant Phenotypes In Arabidopsis, Gabriela Hernandez, Lauren Huebner, Bethany Karlin Zolman

Undergraduate Research Symposium

Auxins are important hormones in plants that regulate growth and development. Disruptions in the auxin biosynthesis pathway result in morphological changes in phenotypes in the model plant Arabidopsis thaliana, including differences in root and leaf formation. Mutations in the Tryptophan Aminotransferase of Arabidopsis (TAA1) and YUCCA (YUC4) genes interfere with the plant's ability to synthesize Indole-3-acetic acid (IAA), the primary auxin involved in plant development. IBR1 and IBR3 act in the multistep conversion of indole-3-butyric acid (IBA) to IAA. ILL2, IAR3, and ILR1 hydrolyze IAA-amino acid conjugates into free IAA. The goal of …

Three Lc-Ms Plant Metabolomics Studies Of Hop (Humulus) Species: Wild H. Neomexicanus, Drought Stress, And Agricultural Terroir, Taylan Morcol

Dissertations, Theses, and Capstone Projects

The hop plant (Humulus L., Cannabaceae) is a dioecious, perennial, twining vine with a long history of human use. Nowadays, hop plants are generally grown for their inflorescences (“cones”), which are used in brewing for their phytochemical metabolites. Many of these metabolites are involved in plant stress response and communication. Genetics and environment are two major factors that affect plant metabolism. In three separate metabolomics studies, this project examined the effects of both genetic and environmental factors on hop phytochemistry.

In the first study, 23 hop genotypes were grown in two different locations in the Pacific Northwest region of …

Evaluation Of Antibacterial Activities Of Tanzanian Moringa Oleifera Extracts Against Escherichia Coli And Klebsiella Pneumonia Clinical Isolates, Sartaz Begum, Jenipher S. Asenga, Valence M.K. Ndesendo, Baraka L. Ngingo

Tanzania Journal of Science

In vitro antibacterial activities of methanolic leaf and seed extracts of Moringa oleifera grown in Dodoma, Tanzania were evaluated using standard microdilution and disc diffusion methods against extended spectrum beta lactamase producing Gram negative bacteria (Escherichia coli and Klebsiella pneumoniae). Microdilution method showed no activity at concentration of 20 mg/mL for all the extracts except leaf extract which exhibited minimum inhibition at concentration of  2.5 µg/mL for E. Coli but when high concentrations of the extracts were used in the disc diffusion method then the results exhibited the highest killing susceptibility at concentration of 0.4 g/mL with zone of inhibition …

Antimicrobial Activities Of Endophytic Fungal Crude Extracts Isolated From Cashew Tree (Anacardium Occidentale), Nana Amiri, Donatha D Tibuhwa

Tanzania Journal of Science

This study presents the antimicrobial activities of endophytic fungal crude extracts isolated from leaves, stems and roots of cashew trees (Anacardium occidentale) which showed disease symptoms and those resistant from Fusarium wilt in Mtwara region. Sections of the cashew trees were made and cultured to isolate endophytes. Eight endophytes were isolated and characterized by using morphological and molecular markers. Neopestalotiopsis, Penicillium, Lasidioplodia and Daldinia sp isolated from resistant tree and Auxarthron and Aspergillus sp from diseased tree. Antimicrobial activities of the isolated endophytic fungal crude extracts were done against pathogenic Fusarium oxysporum and three human pathogens namely, Staphylococcus aureus, Escherichia …

Insecticidal Activities Of Aqueous Extracts Of Five Nigerian Aromatic Spices Against Garden Eggplant Defoliators And Fruit Borer Leucinodes Orbonalis Guenee: Lepidoptera: Crambidae, Juliana A. Ugwu, Kehinde T. Kareem, Julius O. Aluko

Tanzania Journal of Science

The study evaluated the prospects of aqueous extracts of five Nigerian spices against garden eggplant defoliators and fruit borer (Leucinodes orbonalis) in the field. The treatments consisted of Piper guineense (black pepper), Aframomum melegueta (aligator pepper), Eugenia aromatica (cloves), Zingiber officinale (ginger), Capsicum annum (chilli pepper) and untreated check (control). All the aqueous extracts evaluated reduced leaf damaged by defoliators on garden eggplant compared to control. P. guineense, with mean value of 11.02 number of perforations, was the most effective against defoliators, followed by E. aromatica (12.97) reducing leaf damage by 39.64 and 28.74%, respectively. However, their efficacies against defoliating …

Summer To Autumn Population Of Wild Eumaeus Atala On The Ft. Lauderdale Campus Of Nova Southeastern University, Alexandra M. Lens

Mako: NSU Undergraduate Student Journal

Eumaeus atala is an endangered tropical butterfly native to the Caribbean and some parts of Florida, USA. Following population reductions primarily due to habitat loss, E. atala populations are now increasing due to conservation efforts of its cycad host plants, especially Zamia integrifolia (coontie). The purpose of this study was to observe, document, and measure the population of wild E. atala on the Ft. Lauderdale, Florida campus of Nova Southeastern University where landscaping use of host plants supports a natural population of E. atala. Forty-four host plants located in two different sites were observed for 14 weeks. One site …

Understanding Potassium Toxicity Stress Responses Of The Extremophyte Schrenkiella Parvula Using Systems Biology Approaches, Pramod Pantha

LSU Doctoral Dissertations

Schrenkiella parvula is an extremophyte model closely related to Arabidopsis thaliana and Brassica crops. Its natural habitat includes shores of saline lakes in the Irano-Turanian region. It has adapted to grow in soils rich in multiple salts including Na⁺ and K⁺. I have investigated the genetic basis for high K⁺ tolerance in plants using S. parvula as a stress tolerant model compared to the premier plant model, Arabidopsis thaliana which is highly sensitive to salt stresses using physiological, ionomic, transcriptomic, and metabolomic approaches. Under high K⁺ stress, root system architecture changes significantly compared to control …

Temperature Regulation Of Plant Hormone Signaling During Stress And Development, Christian Castroverde, Damaris Dina

Biology Faculty Publications

Global climate change has broad-ranging impacts on the natural environment and human civilization. Increasing average temperatures along with more frequent heat waves collectively have negative effects on cultivated crops in agricultural sectors and wild species in natural ecosystems. These aberrantly hot temperatures, together with cold stress, represent major abiotic stresses to plants. Molecular and physiological responses to high and low temperatures are intricately linked to the regulation of important plant hormones. In this review, we shall highlight our current understanding of how changing temperatures regulate plant hormone pathways during immunity, stress responses and development. This article will present an overview …

Screening Of Aflatoxin-Producing Fungi In Maize And Groundnuts From Three Regions In Tanzania, Kusiluka Agape, Valence Mk Ndesendo, Sartaz Begum

Tanzania Journal of Science

This study screened aflatoxin-producing fungi in maize and groundnuts from Dodoma, Singida and Iringa regions in Tanzania, and assessed the level of peoples’ awareness on aflatoxins health effects. One hundred and twenty samples (20 each crop) were collected and inoculated on Sabouraud dextrose agar and one hundred and eleven samples were observed to have fungal growths that were identified to belong to four genera, namely Aspergillus, Rhizopus, Mucor and Dermatophyte with occurrence frequencies of 75, 2.5, 5 and 10%, respectively. Among the four screened genera of fungi, Aspergillus was observed to be the major aflatoxin-producing fungi. Five species of genus …

Bacterial Growth Inhibitory Effects Of Calotropis Procera’S Latex, Leaves And Roots Extracts, Marco Baluhya, Charles O Joseph

Tanzania Journal of Science

This study was conducted to evaluate in vitro antibacterial potential of water and ethanolic extracts from Calotropis procera roots, leaves and latex. The growth inhibitory effects of the extracts were tested against Escherichia coli using disc diffusion method. Amoxicillin was used as positive control, whereas ethanol and distilled water were used as negative controls. Results showed that water extracts from root, latex and leaves had 3.27 ± 0.14, 3.1 ± 0.21 and 2.38 ± 0.24 cm of maximum inhibition zones, while the ethanolic extracts showed 2.91 ± 0.19, 3.02 ± 0.16 and 0.84 ± 0.31 cm, respectively of maximum inhibition …

Analysis Of Symptom Expressions And Transmission Rates Caused By The Plant Pathogen Phytophthora Ramorum On Native Chaparral Plants From The Genus Arctostaphylos, Bharati Gaonker

Natural Sciences and Mathematics | Biological Sciences Master's Theses

Phytophthora ramorum is the causal agent of Sudden Oak death (SOD), ramorum dieback and ramorum leaf blight which affect both forest environments and nurseries. This oomycete pathogen has had a huge economic impact on the nursery and lumber industry. Forests in California have experienced substantial mortality of oaks affecting the forest dynamics and diversity. Our research investigates four native species and two ornamental cultivars of plants, which belong to the genus Arctostaphylos (manzanita) and are considered to be new hosts for P. ramorum in the chaparral ecosystem of California. Symptom expression and transmission rates were analyzed on Arctostaphylos glauca, …

The Importance Of A Multidisciplinary Approach To Public Health: Addressing Food Insecurity Through A Biological And Sociological Lens, Chloe Grant

Honors Theses

Plants can sense the change of 1 ^oC in their growth environment and thus global climate change has a great impact on plant growth and development. The phenomenon that warm non-stress temperatures promote stem and petiole elongation, as well as leaf hyponastic growth, is collectively known as thermomorphogenesis. While it is known that the basic helix-loop-helix (bHLH) transcription factor PIF4 is highly inducible by temperature elevations and controls thermomorphogenesis in dicots (e.g., Arabidopsis thaliana), the molecular mechanism underlying thermomorphogenetic growth in monocots is not clear. In this study, I identify PIF4 orthologs in several economically important monocotyledonous species and …

A Microbiome Engineering Framework To Evaluate Rhizobial Symbionts Of Legumes, Kenjiro W. Quides, Hagop S. Atamian

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Background

For well over a century, rhizobia have been recognized as effective biofertilizer options for legume crops. This has led to the widespread use of rhizobial inoculants in agricultural systems, but a recurring issue has emerged: applied rhizobia struggle to provide growth benefits to legume crops. This has largely been attributed to the presence of soil rhizobia and has been termed the ‘rhizobial competition problem.’

Scope

Microbiome engineering has emerged as a methodology to circumvent the rhizobial competition problem by creating legume microbiomes that do not require exogenous rhizobia. However, we highlight an alternative implementation of microbiome engineering that focuses …

Isolation And Quantification Of Flavonoids From Kigelia Africana (Lam.) Benth Fruit And Bark And Their Antiradical And Antibacterial Activities, Pamhidzai Dzomba, George Mhini

Tanzania Journal of Science

Kigelia africana is an evergreen deciduous tree used in Zimbabwe folklore medicine for wound and diabetes ulcers healing. This paper reports the isolation and quantification of flavonoids from stem barks and fruits of K. africana as well as their antibacterial and antiradical activities. Flavonoids in ethanol and ethyl-acetate extracts were quantified using UV-Vis spectrophotometry and were found to be 213.490 ± 0.001 mg/L and 36.614 ± 0.001 mg/L, respectively per quercetin equivalent. The preparative and analytical thin layer chromatography was used to profile the flavonoids from fruits and barks using ethyl-acetate and petroleum ether (3:7 v/v) mobile solvent systems. Ethanol …

Antibacterial Activities Of Hyphaene Thebaica (Doum Palm) Fruit Extracts Against Intestinal Microflora And Potential Constipation Associated Pathogens In Yola Metropolis, Nigeria, Joel Ewansiha, Chidimma Ugo, Damaris Kolawole, Lilian Orji

Tanzania Journal of Science

This study aimed at determining the antibacterial activities of Hyphaene thebaica fruit extracts against some intestinal constipation associated bacteria. Qualitative analysis of some phytochemical constituents, agar well diffusion and broth dilution methods were used to determine the zones of inhibition and minimum inhibitory concentration (MIC) of the plant extracts. Phytochemical components viz flavonoids, saponins, terpenoids, tannins, phenols, alkaloids, glycosides and steroids were detected in the plant extracts, and the test organisms were susceptible to the plant extracts. The diameter zone of inhibition (DZI) obtained with n-hexane extract ranged from 15.10 ± 0.51 mm to 2.0 ± 0.55 mm against K. …

Wastewater Clarification And Microbial Load Reduction Using Agro-Forestry And Agricultural Wastes, Joel Njewa, Ephraim Vunain, Timothy Biswick

Tanzania Journal of Science

Five agro-wastes, namely: cassava peels, Irish potato peels, Jatropha curcas seeds, Moringa oleifera seeds and rice husks were investigated as plant-based coagulants for turbidity and microbial load removal from sewage wastewater. Moringa oleifera and Jatropha curcas seeds before usage were defatted with 95% ethanol and the active coagulating component was extracted with 1.0 M NaCl. For the other three agro-wastes, their ashes were evaluated for turbidity and microbial load removal. The ash was prepared through pyrolysis of the raw biomass at a temperature of 800 °C for 3 h. The effect of pH, coagulant dose, settling time on turbidity reduction …

Inhibition Of Biofilm Formation By The Synergistic Action Of Egcg-S And Antibiotics, Shrameeta Shinde, Lee Lee, Tinchun Chu

Department of Biology Faculty Scholarship and Creative Works

Biofilm, a stress-induced physiological state, is an established means of antimicrobial tolerance. A perpetual increase in multidrug resistant (MDR) infections associated with high mortality and morbidity have been observed in healthcare settings. Multiple studies have indicated that the use of natural products can prevent bacterial growth. Recent studies in the field have identified that epigallocatechin gallate (EGCG), a green tea polyphenol, could disrupt bacterial biofilms. A modified lipid-soluble EGCG, epigallocatechin-3-gallate-stearate (EGCG-S), has enhanced the beneficial properties of green tea. This study focuses on utilizing EGCG-S as a novel synergistic agent with antibiotics to prevent or control biofilm. Different formulations of …