Botany Commons^™

Molecular Phylogenetics And Historical Biogeography Of The Tribe Chiococceae (Rubiaceae), Sushil Kumar Paudyal

Biological Sciences Theses & Dissertations

Chiococceae are a monophyletic assemblage of morphologically very diverse groups of plants ranging in habit from subshrubs to shrubs to tall trees exhibiting an astonishing variation in shapes and sizes of corolla, and kinds of fruits and seeds. They are primarily distributed in the Neotropics but also occur in the West Pacific islands; thus exhibiting amphi-Pacific tropical disjunction. This study addresses the phylogenetic relationships and biogeography of the Chiococceae using molecular DNA sequence data, and presents novel data on the tribal and generic delimitations, intergeneric relationships, and the origin and dispersal of this group.

In the most recent tribal delimitations …

Traversing Swanton Road, 18th Ed., James A. West

Academic, Government & Associated Organizational Research Resources

Situated at the northwest end of Santa Cruz County and occupying circa 30 square miles of sharply contrasted terrain, the Scott Creek Watershed concentrates within its geomorphological boundaries, at least 10-12% of California's flora, both native and introduced. Paradoxically, the use/abuse that the watershed has sustained over the past 140+ years, has not necessarily diminished the biodiversity and perhaps parallels the naturally disruptive but biologically energizing processes (fire, flooding, landslides and erosion), which have also been historically documented for the area for +60 years. This is an early edition of an extensive document by James A. West. Please visit the …

The Linkages Between Photosynthesis, Productivity, Growth And Biomass In Lowland Amazonian Forests, Yadvinder Malhi, Christopher E. Doughty, Gregory R. Goldsmith, Daniel B. Metcalfe, Cécile A.J. Girardin, Toby R. Marthews, Jhon Del Aguila-Pasquel, Luiz E.O.C. Aragão, Alejandro Araujo-Murakami, Paulo Brando, Antonino C.L. Da Costa, Javier E. Silva-Espejo, Filio Farfán Amézquita, David R. Galbraith, Carlos A. Quesada, Wanderley Rocha, Norma Salinas-Revilla, Divino Silvério, Patrick Meir, Oliver L. Phillips

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Understanding the relationship between photosynthesis, net primary productivity and growth in forest ecosystems is key to understanding how these ecosystems will respond to global anthropogenic change, yet the linkages among these components are rarely explored in detail. We provide the first comprehensive description of the productivity, respiration and carbon allocation of contrasting lowland Amazonian forests spanning gradients in seasonal water deficit and soil fertility. Using the largest data set assembled to date, ten sites in three countries all studied with a standardized methodology, we find that (i) gross primary productivity (GPP) has a simple relationship with seasonal water deficit, but …

Historical Common Names Of Great Plains Plants, With Scientific Names Index. Volume I: Common Names, Elaine Nowick

Zea E-Books Collection

Containing thousands of entries of both vernacular and scientific names of Great Plains plants, the literature that informs this exhaustive listing spans nearly 300 years. Author Elaine Nowick has drawn from sources as diverse as Linnaeus, Lewis and Clark, and local university extension publications to compile the gamut of practical, and often fanciful, common plant names used over the years. Each common name is accompanied by a definitive scientific name with references and authority information. Interspersed with scientifically-correct botanical line drawings, the entries are written in standard ICBN format, making this a useful volume for scholars as well as lay …

Historical Common Names Of Great Plains Plants, With Scientific Names Index. Volume Ii: Scientific Names Index, Elaine Nowick

Zea E-Books Collection

Containing thousands of entries of both vernacular and scientific names of Great Plains plants, the literature that informs this exhaustive listing spans nearly 300 years. Author Elaine Nowick has drawn from sources as diverse as Linnaeus, Lewis and Clark, and local university extension publications to compile the gamut of practical, and often fanciful, common plant names used over the years. Each common name is accompanied by a definitive scientific name with references and authority information. Interspersed with scientifically-correct botanical line drawings, the entries are written in standard ICBN format, making this a useful volume for scholars as well as lay …

Evaluation And Association Mapping Of Resistance To Tan Spot And Stagonospora Nodorum Blotch In Adapted Winter Wheat Germplasm, Zhaohui Liu, Ibrahim El-Basyoni, Gayan Kariyawasam, Guorong Zhang, Allan Fritz, Jana Hansen, Francois Marais, Andrew Friskop, Shiaoman Chao, Eduard Akhunov, P. Stephen Baenziger

Department of Agronomy and Horticulture: Faculty Publications

Tan spot and Stagonospora nodorum blotch (SNB), often occurring together, are two economically significant diseases of wheat in the Northern Great Plains of the United States. They are caused by the fungi Pyrenophora tritici-repentis and Parastagonospora nodorum, respectively, both of which produce multiple necrotrophic effectors (NE) to cause disease. In this work, 120 hard red winter wheat (HRWW) cultivars or elite lines, mostly from the United States, were evaluated in the greenhouse for their reactions to the two diseases as well as NE produced by the two pathogens. One P. nodorum isolate (Sn4) and four Pyrenophora tritici-repentis isolates (Pti2, …

Tallgrass Prairie Vegetation Response To Spring Fires And Bison Grazing, Stephen L. Winter, Brady W. Allred, Karen R. Hickman, Samuel D. Fuhlendorf

School of Natural Resources: Faculty Publications

Spring fires in tallgrass prairie can create environmental conditions conducive to plant growth in the subsequent growing season. Following fires, burned areas can also be attractive to grazing animals such as bison (Bison bison). Sustained grazing activity within recently burned areas can alter vegetation structure relative to nearby landscape patches that haven’t burned recently. In 2007, we collected data on bison grazing activity, vegetation structure, and the growth and reproduction of a perennial forb, Arnoglossum plantagineum, in Oklahoma tallgrass prairie. We compared these variables in landscape patches that had burned in the spring of 2007 to measurements …

Evaluation Of Desiccated And Deformed Diaspores From Natural Building Materials, Tamas Henn, Robert Pal

Biological Sciences

With the increasing sophistication of paleoethnobotanical methods, it is now possible to reconstruct new aspects of the day-to-day life of past peoples, and, ultimately, gain information about their cultivated plants, land-use practices, architecture, diet, and trade. Reliable identification of plant remains, however, remains essential to the study of paleoethno-botany, and there is still much to learn about precise identification. This paper describes and evaluates the most frequent types of deformed desiccated diaspores revealed from adobe bricks used in buildings in Southwestern Hungary that were built primarily between 1850 and 1950. A total of 24,634 diaspores were recovered from 333.05 kg …

Flowering Plants: Asteraceae, Part 1, Robert H. Mohlenbrock

Illustrated Flora of Illinois

This, the first of three volumes on the aster family planned for the Illustrated Flora of Illinois series, recognizes 388 species in 119 genera, as well as 20 hybrids and 73 lesser taxa. In Asteraceae, Part 1, author Robert Mohlenbrock presents new and historic information in a clear and easy-to-read style. The volume provides an easy-to-use key to the genera and species and a complete description and nomenclatural and habitat notes for each plant, including its usefulness, if applicable. New nomenclatural combinations are shown for several species. The precise illustrations and detailed information allow for the identification of some …

Sister Remberta Westkaemper: A Fine Lady And Excellent Field Botanist, Stephen G. Saupe

Forum Lectures

Sister Remberta, the first full-time president of Saint Ben's and founding member of the CSB Biology Department, was the preeminent authority on the flora of Stearns County. This presentation will focus on Sister Remberta's botanical activities with an introduction to the CSB|SJU Bailey Herbarium. This work was supported by a Centennial Year Fellowship.

Lineage Sorting In Multihost Parasites: Eidmanniella Albescens And Fregatiella Aurifasciata On Seabirds From The Galapagos Islands, Jose Rivera-Parra, Iris Levin, Kevin Johnson, Patricia Parker

Biology Department Faculty Works

Parasites comprise a significant percentage of the biodiversity of the planet and are useful systems to test evolutionary and ecological hypotheses. In this study, we analyze the effect of host species identity and the immediate local species assemblage within mixed species colonies of nesting seabirds on patterns of genetic clustering within two species of multihost ectoparasitic lice. We use three genetic markers (one mitochondrial, COI, and two nuclear, EF1‐α and wingless) and maximum likelihood phylogenetic trees to test whether (1) parasites show lineage sorting based on their host species; and (2) switching of lineages to the alternate host species depends …

Bulletin No. 40: Salt Marsh Plants Of Long Island Sound, R. Scott Warren, Juliana Barrett, Margaret Van Patten

Bulletins

No abstract provided.

Evaluating Potential Plant Hormone Cross Talk Between Auxin And Ethylene In Arabidopsis, Mia Lynne Brown

Theses, Dissertations and Capstones

Auxin is the primary hormone responsible for plant growth and development. Regulation of auxin-response genes occurs through transcriptional activators (auxin response factors called ARFs) which bind to auxin response elements (AuxREs). Some auxin-responsive genes encode aminocyclopropane-1-carboxylic acid synthase (ACS) enzymes which regulate the production of the plant hormone ethylene. The major research objective was to evaluate transcriptional cross talk between auxin and ethylene. Both AuxREs and ethylene response elements were found in several ACS and ARF genes, suggesting cross talk between the two hormones at the transcriptional level. Analysis of transgenic Arabidopsis thaliana plants deficient in ARF7 and containing a …

Mesa Verde Vegetal Survey, Stanley L. Welsh

Books by Faculty of the Monte L. Bean Life Science Museum

Abstract

This write-up is mainly concerned with plant specimens recovered and examined from major prehistoric cliff dwellings being excavated during the Wetherill Mesa Project. It also includes anecdotes from the author’s experiences in Mesa Verde. An overall summary of the species identified is presented at the end of this work, including suggestions as to how plants may have been used based on modern Native American surveys.

Table of Contents

Preface

Prologue

Introduction

Wetherill Mesa

Climate

Collections

Identification

Modern Plant Assemblage

Contemporary Species Compliment

Archeological Plant Assemblage

Plant Species Recovering from the Major Ruins

Kinds of Plant Materials Recovered

Wood-worked Items …

A Whole-Plant Approach To Identifying Sites Of Auxin Biosynthesis In Populus, Daniel Evanich

Botany Honors Papers

The plant hormone auxin regulates many processes throughout plant growth and development. Aboveground auxin biosynthesis is thought to occur exclusively in the shoot apex, where it then moves via polar auxin transport (PAT) down through developing vasculature in the stem. In contrast to the canonical view of the shoot apex as the sole site of auxin production, there is some evidence to suggest that other tissues contribute auxin to the stem. Woody plants in particular may require additional sources of auxin to support the extensive vascular development in the woody stem, but very little is known about whole-plant auxin dynamics …

A Fistful Of Polemoniaceae: New Names And Combinations, J. Mark Porter, Robert W. Patterson

Aliso: A Journal of Systematic and Floristic Botany

New taxa, names, and combinations are provided for five genera in Polemoniaceae: Dayia, Giliastrum, Leptosiphon, Linanthus, and Loeselia. Combinations include the transfer to Dayia of two species formerly included in Ipomopsis and one in Bryantiella (Dayia glutinosa, D. havardii, and D. sonorae), as well as the return of Giliastrum stewartii to species rank. A new name is offered for Linanthus aureus when transferred into Leptosiphon: Leptosiphon chrysanthus and its subspecies, L. chrysanthus subsp. decorus. New combinations for infraspecific taxa are made available for Linanthus californicus (subspp. glandulosus and tomentosus …

Changes In Plant Species Composition And Structure In Two Peri-Urban Nature Preserves Over 10 Years, Rebecca W. Dolan, Jessica D. Stepens, Marcia E. Moore

Scholarship and Professional Work - LAS

Peri-urban natural areas, at the boundaries of cities and adjacent agricultural/rural land, are subject to ecological threats endemic to both land use types. We used permanent plots to document changes in habitat quality by monitoring herbaceous-layer plant species presence and cover over a decade (1996/97 and 2007) in two peri-urban nature preserves in central Indiana, U.S.A. The preserves are comprised of different forest community types: wet-mesic depressional forest and mesic upland forest. Habitat characteristics, based on Floristic Quality Assessment parameters, showed only a single change for either preserve between survey years: wetness values were lower in the wet-mesic depressional site …

An Evolutionary Perspective On Human Cross-Sensitivity To Tree Nut And Seed Allergens, Amanda E. Fisher, Annalise M. Nawrocki

Aliso: A Journal of Systematic and Floristic Botany

Tree nut allergies are some of the most common and serious allergies in the United States. Patients who are sensitive to nuts or to seeds commonly called nuts are advised to avoid consuming a variety of different species, even though these may be distantly related in terms of their evolutionary history. This is because studies in the literature report that patients often display sensitivity to multiple nut species (cross-sensitivity) if they have an existing nut allergy. These reports suggest that cross-sensitivity in patients with nut allergies may be caused by an IgE antibody reacting with epitopes present in the seed …

Rarity In Astragalus: A California Perspective, Philip W. Rundel, Thomas R. Huggins, Barry A. Prigge, M. Rasoul Sharifi

Aliso: A Journal of Systematic and Floristic Botany

Astragalus (Fabaceae), the largest genus of plants in the world with an estimated 3270 species, is known for large numbers of rare endemic species. An inventory of patterns of climatic, topographic, and edaphic diversity of Astragalus taxa in California (98 native species and 144 named taxa) provides a means to understand the occurrence of rarity in relation to climatic equitability and regional species richness of congeneric taxa. Most taxa in the genus have relatively small ranges of distribution, with 50% restricted geographically to a single Jepson Bioregion. The California Native Plant Society lists 51 Astragalus taxa (35% of the native …

Obituary For Robert F. Thorne

Aliso: A Journal of Systematic and Floristic Botany

No abstract provided.

Cyperus Sanguinolentus Vahl, Gordon C. Tucker, Vicky M. Tucker

Specimens by Name

No abstract provided.

The Spanish And Mexican Baseline Of California Tree And Shrubland Distributions Since The Late 18th Century, Richard A. Minnich, Brett R. Goforth, Richard Minnich

Aliso: A Journal of Systematic and Floristic Botany

Historical distributions of 31 tree species, chaparral, and coastal sage scrub described by Spanish land explorers in the late eighteenth and early nineteenth centuries (1769–1806) and in land grant diseños (1784–1846) are reconstructed at 634 localities across central and southern California. This baseline predates most formal botanical surveys by nearly a century, allowing for assessment of vegetation change over the broadest time frame for comparison with pre-historical evidences and future distributions. Spanish accounts are compared with historical sources in the Mexican era (1821–1848), American settlement (1848–1929), and modern range maps of the 1929–1934 Vegetation Type Map (VTM) survey. Among tree …

Phylogeny Of Dyschoriste (Acanthaceae), Noravit Chumchim, Lucinda A. Mcdade, Amanda E. Fisher

Aliso: A Journal of Systematic and Floristic Botany

The pantropical and poorly known genus Dyschoriste (Acanthaceae) is sister to Strobilanthopsis within subtribe Petalidiinae. The present study included 38 accessions of 28 species as sources of DNA data for one nuclear (nrITS) and four chloroplast (intergenic spacers: psbA-trnH, trnS-trnG, ndhF-rpl32, rpl32- trnL^(uag)) regions to provide an estimate of the phylogeny of the genus. We found that Dyschoriste is strongly supported as monophyletic inclusive of Apassalus, Chaetacanthus, and Sautiera. Within Dyschoriste, three geographically cohesive lineages were recovered with moderate to strong support: a mainland African clade, a Caribbean and southeastern United …

Riqueza De Helmintos Parásitos De Vertebrados Silvestres Del Estado De Hidalgo, México, Jorge Falcón-Ordaz, Scott Monks, Griselda Pulido-Flores, Luis García-Prieto, Georgina Lira-Guerrero

Estudios en Biodiversidad

La diversidad de helmintos parásitos de vertebrados del estado de Hidalgo, en México es poco conocida, a pesar de que su estudio se inició desde 1937. Asimismo, mucha de la información generada se ha publicado de manera dispersa, lo que dificulta aún más el establecer con precisión los valores actuales. Por ello, el objetivo de este trabajo fue determinar la riqueza de la fauna helmintológica asociada a vertebrados silvestres de Hidalgo. Para alcanzar dicho objetivo, se realizaron tres acciones: 1) recopilación bibliográfica retrospectiva de información; 2) consulta al acervo de diversas colecciones científicas nacionales e internacionales, e 3) incorporación de …

Calidad Del Agua En La Subcuenca Fluvial La Garita, Acapulco, Guerrero Por Monitoreo Con Insectos, Ana Yolanda Rosas-Acevedo, Audel Sánchez-Infante, José Luis Rosas-Acevedo

Estudios en Biodiversidad

La subcuenca La Garita (Región Hidrológica: Rh19Ac) ha sufrido la influencia del hombre, presenta escorrentía y momentos de estiaje, además de puntos aislados de contaminación por basura y descargas. Se realizó un monitoreo de insectos. Se exploró la posibilidad del uso del índice BMWP (Biological Monitoring Working Party), para arroyos y ríos, en la determinación de la calidad del agua y del ecosistema. En la parte alta o cabecera (BMWP=122) correspondió a excelente (ecosistema no impactado), en la zona media o de transferencia (BMWP-CR=118) fue buena (ecosistema no alterado de manera sensible) y en la parte baja o zona de …

Problemática De Contaminación En La Zona Agrícola De La Reserva De La Biosfera Barranca De Metztitlán, Hidalgo, México, Maritza López-Herrera, Leticia Romero-Bautista, Nahara Ayala-Sánchez, Irma E. Soria-Mercado, Amelia Portillo-López

Estudios en Biodiversidad

El presente trabajo se generó con el objetivo de dar a conocer la problemática que existe actualmente en una zona agrícola de gran importancia en el estado de Hidalgo, la “Vega de Metztitlán”, zona que forma parte de la Reserva de la Biosfera Barranca de Metztitlán, sitio declarado como reserva federal. El aporte de agua residual que se hace a través de los acuíferos que irrigan a la zona, ha generado que este sitio se vea expuesto a un gran riesgo de contaminación por metales pesados, hidrocarburos y demás contaminantes, los cuáles quedan biodisponibles para las plantas e indirectamente existe …

Los Hongos Poliporoides De La Subcuenca Del Río Metztitlán, Hidalgo, México, Leticia Romero-Bautista, Miguel Ángel Islas-Santillán, Maritza López-Herrera, Nahara Ayala-Sánchez, Irma Estela Soria-Mercado, Amelia Portillo-López, Tania Raymundo-Ojeda, Ricardo Valenzuela-Garza

Estudios en Biodiversidad

Los hongos poliporoides son excelentes descomponedores de la madera, aunque también hay ectomicorrizógenos; su importancia ecológica radica en que ayudan a mantener el equilibrio del ciclo del carbono en la naturaleza. Además presentan potencial biotecnológico dadas sus características nutrimentales, medicinales y degradadoras, por su capacidad de producir metabolitos secundarios y ser potencialmente cultivables. Se analiza la importancia del impacto ambiental en los ecosistemas de la subcuenca del río Metztitlán y la diversidad de este grupo de hongos asociados a ellos. Se revisaron ejemplares de herbario y se realizaron exploraciones micológicas en 13 comunidades vegetales de 11 municipios, y 37 localidades …

Message From The Editorial Board, John R. Clark

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Instructions For Authors, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Testing Carbon Farming Opportunities For Salinity Management, Peter Ritson, Mike G. Clarke, Adele Killen, Sarah Jeffery

All other publications

An emerging prospect for farm revenue from revegetation of saline and other lands that are marginal or non-productive for agriculture is the sale of carbon credits. Australian Government schemes for carbon credits include the Carbon Farming Initiative (CFI) and the proposed Emissions Reduction Fund (ERF) Therefore, this study aimed to assess the potential for woody vegetation (trees and shrubs) established on and around salt-affected lands in the Northern Agricultural Region (NAR) to remove carbon dioxide from the atmosphere and store (sequester) the carbon in new growth. Revegetation plantings on six farms were selected for the study after the landowners expressed …