Systems Neuroscience Commons^™

Role Of Trkb-Signaling In Taste Development And Function., Jennifer Rios-Pilier

Electronic Theses and Dissertations

In the geniculate ganglion, taste neurons likely differentiate into subtypes during development, but very little is known about how these neurons are defined molecularly or how they differentiate. Embryonically, geniculate neuron development is regulated by the growth factor, brain ­derived neurotrophic factor (BDNF). Postnatally, BDNF becomes restricted to subpopulations of taste receptor cells with specific functions, primarily sour responding. I hypothesized that during development, the receptor for BDNF, tropomyosin kinase B receptor (TrkB), also becomes restricted to a neuronal subset. I used transgenic mouse models to label and quantify both geniculate sensory neurons (Phox2b+), and those expressing TrkB (GFP) across …

Combinatorial Geometry Of Threshold-Linear Networks, Christopher Langdon

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

How Auditory And Visual Working Memory Tasks Affect Misophonic Response Levels, Erin Ansusinha, Melette Devore, Dr. Daniel Corts

Celebration of Learning

Misophonia is characterized by an extreme aversion towards auditory triggers, such as chewing, tapping, and other repetitive sounds, making ignoring or directing attention away from the sounds nearly impossible. It is not classified as a psychological disorder, but it is associated with significant, reflexive emotional disturbances. Studies have shown that the anterior insular cortex (AIC), an area involved in detecting irregularities or errors, functions differently in people with misophonia, which translates to difficulty in controlling emotional reactions. The present study examines how misophonic reactions might interact with cognition with particular attention to how cognitive demands may exacerbate the emotional response. …

Cholinergic Control Of Cortical Circuit Activity, Rajan Dasgupta

Dissertations and Theses (Open Access)

Cholinergic neurons of the basal forebrain send extensive projections to all regions of the neocortex and are critically involved in a diverse array of cognitive functions, including sensation, attention and learning. Cholinergic signaling also plays a crucial role in the moment-to-moment control of ongoing cortical state transitions that occur during periods of wakefulness. Yet, the underlying circuit mechanisms of synaptic cholinergic function in the neocortex remain unclear. Moreover, acetylcholine continues to be widely viewed as a slow and diffuse neuromodulator, despite the preponderance of in vivo evidence demonstrating rapid cholinergic function. In this study, we used a combination of optogenetics …

Organization And Development Of Cholinergic Input To The Mouse Visual Thalamus., Guela Sokhadze

Electronic Theses and Dissertations

Cholinergic signaling plays a vital role in modulating the flow of sensory information through thalamic circuits in a state-dependent manner. In the dorsal lateral geniculate nucleus (dLGN), the thalamic visual relay, release of acetylcholine (ACh) contributes to enhanced thalamocortical transfer of retinal signal during behavioral states of arousal, wakefulness, and sleep/wake transitions. Moreover, ACh modulates activity of the thalamic reticular nucleus (TRN), a structure which provides inhibitory input to dLGN. While several cholinergic nuclei have been shown to innervate dLGN and TRN, it is unclear how projections from each area are organized. Furthermore, little is known of how or when …

Population Codes And Their Correlates In Decision Making, Neda Shahidi

Dissertations and Theses (Open Access)

This dissertation was organized in two parts: in part 1, we discussed Neural Correlates of Perceptual Accuracy” and in part 2 we discussed “Strategy encoding in Prefrontal Cortex”.

Abstract of part 1_The accurate transmission of electrical signals within neocortex is central to sensory perception and cognition. Theoretical studies have long proposed that the temporal coordination of cortical spiking activity controls signal transmission and cognitive function. In reality, whether and how the precise temporal coordination in neuronal populations during wakefulness influences perception remains a mystery. Here, we simultaneously recorded populations of neurons in early and mid-level visual cortex (areas V1 …

Modeling And Mapping Addiction In The Zebrafish, Danio Rerio, Bradley Serpa

Master of Science in Integrative Biology Theses

Driven by the communication of dopamine, the vertebrate reward system has been evolutionarily conserved to maintain survival and optimize fitness. The neural circuits governing this system integrate sensory stimuli to produce appropriate, self-preserving responses that underlie experience-based learning. In the most primitive vertebrates, dopamine release in neuronal circuits drives homeostatic behaviors, such as seeking nutrients, finding a mate, or avoiding danger. From agnathans to mammals, dopaminergic synthesis and signaling genes and molecules, along with neuronal pathways and reward system-based behaviors, remain highly conserved. Dopamine signaling proteins include two classes of metabotropic G-Protein Receptor Coupled Dopamine Receptors, D1-like (DRD1) and D2-like …

Mapping Molecular Datasets Back To The Brain Regions They Are Extracted From: Remembering The Native Countries Of Hypothalamic Expatriates And Refugees, Arshad Khan, Alice Grant, Anais Martinez, Gully Burns, Brendan Thatcher, Vishwanath Anekonda, Benjamin Thompson, Zachary Roberts, Daniel Moralejo, James Blevins

Selected Works Temporary Series

This article, which includes novel unpublished data along with commentary and analysis,focuses on approaches to link transcriptomic, proteomic, and peptidomic datasets mined frombrain tissue to the original locations within the brain that they are derived from using digital atlasmapping techniques. We use, as an example, the transcriptomic, proteomic and peptidomicanalyses conducted in the mammalian hypothalamus. Following a brief historical overview, wehighlight studies that have mined biochemical and molecular information from the hypothalamusand then lay out a strategy for how these data can be linked spatially to the mapped locations in acanonical brain atlas where the data come from, thereby allowing …

Mapping Molecular Datasets Back To The Brain Regions They Are Extracted From: Remembering The Native Countries Of Hypothalamic Expatriates And Refugees, Khan, Alice Grant, Anais Martinez, Gully Burns, Brendan Thatcher, Vishwanath Anekonda, Benjamin Thompson, Zachary Roberts, Daniel Moralejo, James Blevins

Departmental Papers (Biology)

This article, which includes novel unpublished data along with commentary and analysis,focuses on approaches to link transcriptomic, proteomic, and peptidomic datasets mined frombrain tissue to the original locations within the brain that they are derived from using digital atlasmapping techniques. We use, as an example, the transcriptomic, proteomic and peptidomicanalyses conducted in the mammalian hypothalamus. Following a brief historical overview, wehighlight studies that have mined biochemical and molecular information from the hypothalamusand then lay out a strategy for how these data can be linked spatially to the mapped locations in acanonical brain atlas where the data come from, thereby allowing …

Contextual Fear Retrieval-Induced Fos Expression Across Early Development In The Rat: An Analysis Using Established Nervous System Nomenclature Ontology, Anthony Santarelli, Arshad Khan, Andrew Poulos

Selected Works Temporary Series

No abstract provided.

Contextual Fear Retrieval-Induced Fos Expression Across Early Development In The Rat: An Analysis Using Established Nervous System Nomenclature Ontology, Santarelli, Arshad Khan, Andrew Poulos

Departmental Papers (Biology)

No abstract provided.

Brightness Perception Involves Local Adaptation Opposed By Lateral Interaction, Qasim Zaidi, Romain Bachy, Jose-Manuel Alonso

MODVIS Workshop

No abstract provided.

Effect Of Noise On Mutually Inhibiting Pyramidal Cells In Visual Cortex: Foundation Of Stochasticity In Bi-Stable Perception, Naoki Kogo, Felix Kern, Thomas Nowotny, Raymond Van Ee, Richard Van Wezel, Takeshi Aihara

MODVIS Workshop

Bi-stable perception has been an important tool to investigate how visual input is interpreted and how it reaches consciousness. To explain the mechanisms of this phenomenon, it has been assumed that a mutual inhibition circuit plays a key role. It is possible that this circuit functions to resolve ambiguity of input image by quickly shifting the balance of competing signals in response to conflicting features. Recently we established an in vitro neural recording system combined with computerized connections mediated by model neurons and synapses (“dynamic clamp” system). With this system, mutual inhibition circuit between two pyramidal cells from primary visual …

Modeling Emmetropization In An Incessantly Moving Eye, Michele Rucci, Jonathan D. Victor

MODVIS Workshop

Many questions remain unanswered regarding the specific cues and mechanisms for emmetropization, the process by which, during development, the eye adjusts itself so that distant objects are in focus. Research has so far primarily focused on the spatial cues present in the image on the retina, such as the degree of blur. However, eye movements incessantly transform a mostly static scene into temporal modulations, so that the input to the retina is not an image, but a spatiotemporal flow of luminance. Models of retinal input signals indicate that this space-time reformatting caused by eye movements yields additional cues to the …

Computer Vision Evidence Supporting Craniometric Alignment Of Rat Brain Atlases To Streamline Expert-Guided, First-Order Migration Of Hypothalamic Spatial Datasets Related To Behavioral Control, Arshad Khan, Jose Perez, Claire Wells, Olac Fuentes

Selected Works Temporary Series

The rat has arguably the most widely studied brain among all animals, with numerous reference atlases for rat brain having been published since 1946. For example, many neuroscientists have used the atlases of Paxinos and Watson (PW, first published in 1982) or Swanson (S, first published in 1992) as guides to probe or map specific rat brain structures and their connections. Despite nearly three decades of contemporaneous publication, no independent attempt has been made to establish a basic framework that allows data mapped in PW to be placed in register with S, or vice versa. Such data migration would allow …

Computer Vision Evidence Supporting Craniometric Alignment Of Rat Brain Atlases To Streamline Expert-Guided, First-Order Migration Of Hypothalamic Spatial Datasets Related To Behavioral Control, Khan, Jose Perez, Claire Wells, Olac Fuentes

Departmental Papers (Biology)

The rat has arguably the most widely studied brain among all animals, with numerous reference atlases for rat brain having been published since 1946. For example, many neuroscientists have used the atlases of Paxinos and Watson (PW, first published in 1982) or Swanson (S, first published in 1992) as guides to probe or map specific rat brain structures and their connections. Despite nearly three decades of contemporaneous publication, no independent attempt has been made to establish a basic framework that allows data mapped in PW to be placed in register with S, or vice versa. …

Longitudinal Tracking Of Physiological State With Electromyographic Signals., Robert Warren Stallard

Electronic Theses and Dissertations

Electrophysiological measurements have been used in recent history to classify instantaneous physiological configurations, e.g., hand gestures. This work investigates the feasibility of working with changes in physiological configurations over time (i.e., longitudinally) using a variety of algorithms from the machine learning domain. We demonstrate a high degree of classification accuracy for a binary classification problem derived from electromyography measurements before and after a 35-day bedrest. The problem difficulty is increased with a more dynamic experiment testing for changes in astronaut sensorimotor performance by taking electromyography and force plate measurements before, during, and after a jump from a small platform. A …

Moderate Prenatal Alcohol Exposure Impairs Performance In An Object-Place-Paired-Associate Task, Lilliana May Sanchez

Psychology ETDs

Memory impairments, including spatial and object processing, are often observed in individuals with Fetal Alcohol Spectrum Disorder. Much attention has been directed towards the hippocampus, which displays significant alterations after moderate prenatal alcohol exposure (PAE). In the present study, we tested a moderate PAE rat model in an object-place-paired-associate (OPPA) task, previously shown to require hippocampal processing. The OPPA task was composed of training rats to discriminate between an identical pair of objects presented in 180° opposite arms of a radial arm maze. Animals were given a total of 10 trials per day over 14 consecutive days of training and …

The Role Of The Chorda Tympani Nerve In The Structural Development Of Brainstem Neurons, Louis Martin

UNO Student Research and Creative Activity Fair

The brain changes substantially throughout development. In the taste system, brainstem neurons undergo dramatic structural alterations after birth. Most notably, these cells’ dendrites, branch-like projections that that receive sensory input, grow 3-4 times longer by adulthood. It is not clear whether incoming signals about taste are necessary for these structural changes to occur. We have consistently found that when the chorda tympani taste nerve (CT) is cut at an early age in rats, it does not regenerate. With this manipulation, we can permanently limit the amount of taste information that reaches the brain. To determine the role of taste input …

Review: Do The Different Sensory Areas Within The Cat Anterior Ectosylvian Sulcal Cortex Collectively Represent A Network Multisensory Hub?, M. Alex Meredith, Mark T. Wallace, H. Ruth Clemo

Anatomy and Neurobiology Publications

Current theory supports that the numerous functional areas of the cerebral cortex are organized and function as a network. Using connectional databases and computational approaches, the cerebral network has been demonstrated to exhibit a hierarchical structure composed of areas, clusters and, ultimately, hubs. Hubs are highly connected, higher-order regions that also facilitate communication between different sensory modalities. One region computationally identified network hub is the visual area of the Anterior Ectosylvian Sulcal cortex (AESc) of the cat. The Anterior Ectosylvian Visual area (AEV) is but one component of the AESc that also includes the auditory (Field of the Anterior Ectosylvian …

Can A Comprehensive Transition Plan To Barefoot Running Be The Solution To The Injury Epidemic In American Endurance Runners?, Michael A. Scarlett

CMC Senior Theses

Fossils belonging to the genus Homo, dating as far back as two million years ago, exhibit uniquely efficient features suggesting that early humans had evolved to become exceptional endurance runners. Although they did not have the cushion or stability-control features provided in our modern day running shoes, our early human ancestors experienced far less of the running-related injuries we experience today. The injury rate has been estimated as high as 90% annually for Americans training for a marathon and as high as 79% annually for all American endurance runners. There is an injury epidemic in conventionally shod populations that …

The Integration Of Extrinsic And Intrinsic Neuromodulators In The Olfactory System, Kristyn M. Lizbinski

Graduate Theses, Dissertations, and Problem Reports (ETD)

Neuromodulation is a ubiquitous feature of neural systems, allowing flexible, context specific control over network dynamics by adjusting the biophysical and synaptic properties of neurons. Neuromodulation was first described in invertebrate motor systems and early work established a basic dichotomy for neuromodulation as having either an intrinsic origin (i.e. neurons that participate in network coding) or an extrinsic origin (i.e. neurons from independent networks). Although this dichotomy has been thoroughly considered in motor systems, it has received far less attention in sensory systems. Furthermore, nervous systems are continually subject to a dynamic cocktail of both intrinsic and extrinsic modulators. However, …