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Full-Text Articles in Systems Neuroscience

Modeling Synaptic Dysfunction As Neural Contagion: A Graph-Based Sedr Framework For Simulating Signal Spread, Michelle Marfo, Dr. Padmanabhan Seshaiyer, Alonso Ogueda-Oliva Nov 2025

Modeling Synaptic Dysfunction As Neural Contagion: A Graph-Based Sedr Framework For Simulating Signal Spread, Michelle Marfo, Dr. Padmanabhan Seshaiyer, Alonso Ogueda-Oliva

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Influence Of Task On The Geometry Of A Perceptual Space, Jonathan D. Victor, Mary M. Conte May 2025

Influence Of Task On The Geometry Of A Perceptual Space, Jonathan D. Victor, Mary M. Conte

MODVIS Workshop

Perceptual spaces are representations of a sensory or cognitive domain in which the domain’s elements correspond to points, and distances between these points are perceptual differences. Proximity relationships within a perceptual space can support a variety of functions, including discrimination, grouping, learning, and generalization. These diverse functions may use the features of the domain in different ways, resulting in task-dependent influences on the geometry of the space.

To identify and characterize these influences, we focused on a domain of visual textures. These textures varied across many dimensions, including mean luminance and low- and high-order spatial correlations, which formed the axes …


Investigating The Effects Of Resveratrol On Opioid-Induced Hyperalgesia, Bryana Cox, Thien Do, Ashlyn Hughes, Zane Kingsbury, Keara Leroy, Andrew J. Payne Feb 2025

Investigating The Effects Of Resveratrol On Opioid-Induced Hyperalgesia, Bryana Cox, Thien Do, Ashlyn Hughes, Zane Kingsbury, Keara Leroy, Andrew J. Payne

Annual Research Symposium

Opioid-induced hyperalgesia (OIH) is an adverse effect of chronic opioid therapy, characterized by increased sensitivity to pain. This study will seek to determine if using resveratrol supplementation as an indirect enhancer to increase the expression of the KCC2 membrane transporter can alleviate the symptoms of OIH in human subjects.


Local Geometry Of Elementary Visual Computations, Peter Neri May 2024

Local Geometry Of Elementary Visual Computations, Peter Neri

MODVIS Workshop

Visual operators (e.g. edge detectors) are classically modelled using small circuits involving canonical computations, such as template-matching and gain control. Circuit models explain many aspects of the empirical descriptors that are used to characterize local visual operators, from sensitivity to classification images. Notwithstanding their utility, these models fail to provide a unified framework encompassing the variety of effects observed experimentally, such as the impact of contrast, SNR, and attention on the above descriptors. My goal is to start with a simple, plausible geometrical representation of the perceptual operation carried out by the observer, and to show that this representation is …


Characterization Of Perceptual Spaces From Triadic Similarity Judgments, Jonathan Victor May 2024

Characterization Of Perceptual Spaces From Triadic Similarity Judgments, Jonathan Victor

MODVIS Workshop

Perceptual spaces are mental workspaces that organize a sensory or cognitive domain into a format that supports functions such as comparison, grouping, learning, and generalization. Determining the geometry of a perceptual space – i.e., the properties of the perceptual distances within the space -- is thus crucial not only to understand these intermediate levels of processing at an algorithmic level, but also as a starting point for comparison with neural measures of similarity. While perceptual spaces are often taken to be Euclidean or nearly so (the classic example is trichromatic color space), this assumption, when tested, is often violated. Moreover, …


Differential Cortical Monoamines Release During Exercise In Rats Chronically Implanted With Microdialysis Probes, Christine G. Gerin Sep 2023

Differential Cortical Monoamines Release During Exercise In Rats Chronically Implanted With Microdialysis Probes, Christine G. Gerin

Research Symposium

Physical exercise is known to positively influence mood, to reduce anxiety and to improve reaction to stress. Cerebral monoaminergic systems are thought to underly the neurochemical influence of exercise on mood and behavior. We hypothesized that beneficial effects of exercise can be shown by variations of neurotransmitters release in the cerebral cortex. We aimed at demonstrating that there is a temporal relationship between release of plasma and cerebral monoamines (A, NA, 5-HT, DA) and spontaneous running exercise in rats. Ten Spague Dawley rats (250 g) were chronically implanted (for up to 39 days) with a left common carotid cannula and …


Gap Junctions And Synchronization Clusters In The Thalamic Reticular Nuclei, Anca R. Radulescu, Michael Anderson May 2023

Gap Junctions And Synchronization Clusters In The Thalamic Reticular Nuclei, Anca R. Radulescu, Michael Anderson

Biology and Medicine Through Mathematics Conference

No abstract provided.


Physiological Rationale For Fixation Eye-Movements, Qasim Zaidi May 2023

Physiological Rationale For Fixation Eye-Movements, Qasim Zaidi

MODVIS Workshop

No abstract provided.


Task-Driven Influences On Fixational Eye Movements, Jonathan Victor, Yen-Chu Lin, Michele Rucci May 2023

Task-Driven Influences On Fixational Eye Movements, Jonathan Victor, Yen-Chu Lin, Michele Rucci

MODVIS Workshop

There is now compelling evidence that the spatiotemporal remapping carried out by fixational eye movements (FEMs) is an essential step in visual processing. Moreover, the overall Brownian-like statistics of FEMs are calibrated to map fine spatial detail into the temporal frequency range to which retinal circuitry is tuned. Here, we tested the hypothesis that the detailed spatial characteristics of FEMs can be adjusted to task demands via cognitive influences that operate even in the absence of a visual stimulus. We examined FEMs in a task that required subjects (N=6) to report which of two letters was displayed. Trials were blocked; …


Active Encoding Of Space Through Time, Michele Rucci, Jonathan D. Victor May 2023

Active Encoding Of Space Through Time, Michele Rucci, Jonathan D. Victor

MODVIS Workshop

No abstract provided.


Reversible Emerging Neuropsychological Pattern In Chronic Intractable Migraine, Tanner Williford, Pooja Chemiti, Mason Allen, Brandon Burrell, Stephanie Chavez, Jude Emego, Bridger Gunter, Matthew Huertas, Matthew Jennings, Roshni Jogin, Paulo Kelly, Laura Minor, Steven Salazar, Jameson Williams, David W. Sant, John A. Kriak, Kyle B. Bills Feb 2023

Reversible Emerging Neuropsychological Pattern In Chronic Intractable Migraine, Tanner Williford, Pooja Chemiti, Mason Allen, Brandon Burrell, Stephanie Chavez, Jude Emego, Bridger Gunter, Matthew Huertas, Matthew Jennings, Roshni Jogin, Paulo Kelly, Laura Minor, Steven Salazar, Jameson Williams, David W. Sant, John A. Kriak, Kyle B. Bills

Annual Research Symposium

No abstract provided.


Probability Distributions Of Active Sensing, Kathleen Hoffman May 2022

Probability Distributions Of Active Sensing, Kathleen Hoffman

Biology and Medicine Through Mathematics Conference

No abstract provided.


Characterization Of Local And Global Statistics In Three Kinds Of Medical Images, And An Example Of Their Role In A Clinical Judgment, Jonathan Victor, Amanda Simon, Craig K. Abbey May 2022

Characterization Of Local And Global Statistics In Three Kinds Of Medical Images, And An Example Of Their Role In A Clinical Judgment, Jonathan Victor, Amanda Simon, Craig K. Abbey

MODVIS Workshop

No abstract provided.


A Two-Layer Model Explains Higher-Order Feature Selectivity Of V2 Neurons, Timothy D. Oleskiw, Justin D. Lieber, J. Anthony Movshon, Eero P. Simoncelli May 2022

A Two-Layer Model Explains Higher-Order Feature Selectivity Of V2 Neurons, Timothy D. Oleskiw, Justin D. Lieber, J. Anthony Movshon, Eero P. Simoncelli

MODVIS Workshop

Neurons in cortical area V2 respond selectively to higher-order visual features, such as the quasi-periodic structure of natural texture. However, a functional account of how V2 neurons build selectivity for complex natural image features from their inputs – V1 neurons locally tuned for orientation and spatial frequency – remains elusive.

We made single-unit recordings in area V2 in two fixating rhesus macaques. We presented stimuli composed of multiple superimposed grating patches that localize contrast energy in space, orientation, and scale. V2 activity is modeled via a two-layer linear-nonlinear network, optimized to use a sparse combination of V1-like outputs to account …


Nonlinear Control Of Biological Dynamical Systems, Megan J. Morrison May 2020

Nonlinear Control Of Biological Dynamical Systems, Megan J. Morrison

Biology and Medicine Through Mathematics Conference

No abstract provided.


Tissue-Specific Regulation Of Pnmt By Intron Retention During Neural Development, Meeti Mehta Jan 2020

Tissue-Specific Regulation Of Pnmt By Intron Retention During Neural Development, Meeti Mehta

Digital Repository: Showcase of Undergraduate Research Excellence

No abstract provided.


Functional Organization Of Cortical Maps For Ocular Dominance And Light-Dark Polarity In Primary Visual Cortex, Sohrab Najafian, Jian Zhong Jin, Jose-Manuel Alonso May 2019

Functional Organization Of Cortical Maps For Ocular Dominance And Light-Dark Polarity In Primary Visual Cortex, Sohrab Najafian, Jian Zhong Jin, Jose-Manuel Alonso

MODVIS Workshop

No abstract provided.


The Challenge For Vision Of Fluctuating Real-World Illumination, David H. Foster May 2019

The Challenge For Vision Of Fluctuating Real-World Illumination, David H. Foster

MODVIS Workshop

No abstract provided.


Combinatorial Geometry Of Threshold-Linear Networks, Christopher Langdon Oct 2018

Combinatorial Geometry Of Threshold-Linear Networks, Christopher Langdon

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


How Auditory And Visual Working Memory Tasks Affect Misophonic Response Levels, Erin Ansusinha, Melette Devore, Dr. Daniel Corts Sep 2018

How Auditory And Visual Working Memory Tasks Affect Misophonic Response Levels, Erin Ansusinha, Melette Devore, Dr. Daniel Corts

Celebration of Learning

Misophonia is characterized by an extreme aversion towards auditory triggers, such as chewing, tapping, and other repetitive sounds, making ignoring or directing attention away from the sounds nearly impossible. It is not classified as a psychological disorder, but it is associated with significant, reflexive emotional disturbances. Studies have shown that the anterior insular cortex (AIC), an area involved in detecting irregularities or errors, functions differently in people with misophonia, which translates to difficulty in controlling emotional reactions. The present study examines how misophonic reactions might interact with cognition with particular attention to how cognitive demands may exacerbate the emotional response. …


Brightness Perception Involves Local Adaptation Opposed By Lateral Interaction, Qasim Zaidi, Romain Bachy, Jose-Manuel Alonso May 2018

Brightness Perception Involves Local Adaptation Opposed By Lateral Interaction, Qasim Zaidi, Romain Bachy, Jose-Manuel Alonso

MODVIS Workshop

No abstract provided.


Effect Of Noise On Mutually Inhibiting Pyramidal Cells In Visual Cortex: Foundation Of Stochasticity In Bi-Stable Perception, Naoki Kogo, Felix Kern, Thomas Nowotny, Raymond Van Ee, Richard Van Wezel, Takeshi Aihara May 2018

Effect Of Noise On Mutually Inhibiting Pyramidal Cells In Visual Cortex: Foundation Of Stochasticity In Bi-Stable Perception, Naoki Kogo, Felix Kern, Thomas Nowotny, Raymond Van Ee, Richard Van Wezel, Takeshi Aihara

MODVIS Workshop

Bi-stable perception has been an important tool to investigate how visual input is interpreted and how it reaches consciousness. To explain the mechanisms of this phenomenon, it has been assumed that a mutual inhibition circuit plays a key role. It is possible that this circuit functions to resolve ambiguity of input image by quickly shifting the balance of competing signals in response to conflicting features. Recently we established an in vitro neural recording system combined with computerized connections mediated by model neurons and synapses (“dynamic clamp” system). With this system, mutual inhibition circuit between two pyramidal cells from primary visual …


Modeling Emmetropization In An Incessantly Moving Eye, Michele Rucci, Jonathan D. Victor May 2018

Modeling Emmetropization In An Incessantly Moving Eye, Michele Rucci, Jonathan D. Victor

MODVIS Workshop

Many questions remain unanswered regarding the specific cues and mechanisms for emmetropization, the process by which, during development, the eye adjusts itself so that distant objects are in focus. Research has so far primarily focused on the spatial cues present in the image on the retina, such as the degree of blur. However, eye movements incessantly transform a mostly static scene into temporal modulations, so that the input to the retina is not an image, but a spatiotemporal flow of luminance. Models of retinal input signals indicate that this space-time reformatting caused by eye movements yields additional cues to the …


The Role Of The Chorda Tympani Nerve In The Structural Development Of Brainstem Neurons, Louis Martin Mar 2018

The Role Of The Chorda Tympani Nerve In The Structural Development Of Brainstem Neurons, Louis Martin

UNO Student Research and Creative Activity Fair

The brain changes substantially throughout development. In the taste system, brainstem neurons undergo dramatic structural alterations after birth. Most notably, these cells’ dendrites, branch-like projections that that receive sensory input, grow 3-4 times longer by adulthood. It is not clear whether incoming signals about taste are necessary for these structural changes to occur. We have consistently found that when the chorda tympani taste nerve (CT) is cut at an early age in rats, it does not regenerate. With this manipulation, we can permanently limit the amount of taste information that reaches the brain. To determine the role of taste input …


Distinct Combinations Of Premotor Neuronal Activation Encode Multimodal Information And Predict Motor Output, Chris Goldsmith Oct 2017

Distinct Combinations Of Premotor Neuronal Activation Encode Multimodal Information And Predict Motor Output, Chris Goldsmith

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Co-Modulation Masking Release Begins In The Auditory Periphery, Kareem R. Hussein, Agudemu Borjigan, Mark Sayles Aug 2017

Co-Modulation Masking Release Begins In The Auditory Periphery, Kareem R. Hussein, Agudemu Borjigan, Mark Sayles

The Summer Undergraduate Research Fellowship (SURF) Symposium

Understanding speech in noisy environments can be difficult, especially for people with hearing loss. The background noise can cover up the sounds of interest. Normally, the auditory system works to alleviate this problem by tagging and then cancelling the noise. Our experiments are aimed at understanding the mechanism of this noise cancellation process. We hypothesize that non-linear signal processing in the mammalian cochlea (the most peripheral part of the auditory system) is the basis of noise cancellation. To test this hypothesis, we measured the responses of auditory-nerve fibers (ANFs) to sounds embedded in background noise with different statistical properties. ANFs …


Central And Peripheral Difference In Perceptual Bias In Ambiguous Perception Using Dichoptic Stimuli --- Implications For The Analysis-By-Synthesis Process In Visual Recognition, Li Zhaoping Prof May 2017

Central And Peripheral Difference In Perceptual Bias In Ambiguous Perception Using Dichoptic Stimuli --- Implications For The Analysis-By-Synthesis Process In Visual Recognition, Li Zhaoping Prof

MODVIS Workshop

No abstract provided.


Similarity-Based Fusion Of Meg And Fmri Discerns Early Feedforward And Feedback Processing In The Ventral Stream, Yalda Mohsenzadeh Dr., Radoslaw Martin Cichy Dr., Aude Oliva Dr., Dimitrios Pantazis Dr. May 2017

Similarity-Based Fusion Of Meg And Fmri Discerns Early Feedforward And Feedback Processing In The Ventral Stream, Yalda Mohsenzadeh Dr., Radoslaw Martin Cichy Dr., Aude Oliva Dr., Dimitrios Pantazis Dr.

MODVIS Workshop

Successful models of vision, such as DNNs and HMAX, are inspired by the human visual system, relying on a hierarchical cascade of feedforward transformations akin to the ventral stream. Despite these advances, the human visual cortex remains unique in complexity, with feedforward and feedback pathways characterized by rapid spatiotemporal dynamics as visual information is transformed into semantic content. Thus, a systematic characterization of the spatiotemporal and representational space of the ventral visual pathway can offer novel insights in the duration and sequencing of cognitive processes, suggesting computational constraints and new architectures for computer vision models.

To discern the feedforward and …


Comparing Diverse V1 Models On The Same Platform: Virtual V1sion, Cheryl Olman May 2017

Comparing Diverse V1 Models On The Same Platform: Virtual V1sion, Cheryl Olman

MODVIS Workshop

No abstract provided.


Evaluating And Interpreting A Convolutional Neural Net As A Model Of V4, Dean A. Pospisil, Anitha Pasupathy, Wyeth Bair May 2017

Evaluating And Interpreting A Convolutional Neural Net As A Model Of V4, Dean A. Pospisil, Anitha Pasupathy, Wyeth Bair

MODVIS Workshop

Convolutional neural nets (CNNs) are currently the highest performing image recognition computer algorithms. Of interest is whether these CNNs, following extensive supervised training, perform computations similar to those in the ventral visual stream. We investigated whether CNN units’ tuning for shape boundaries was similar to V4’s as described in the angular position and curvature (APC) model of Pasupathy and Connor 2001. From units in all layers of AlexNet (see Figure A), an object recognition CNN, we recorded responses to the original study’s set of shape stimuli (51 simple closed shapes at up to 8 rotations) presented at 51 spatial translations …