Neuroscience and Neurobiology Commons^™

Resolving Intravoxel White Matter Structures In The Human Brain Using Regularized Regression And Clustering, Andrea Hart, Brianna Smith, Sean Smith, Elijah Sales, Jacqueline Hernandez-Camargo, Yarlin Mayor Garcia, Felix Zhan, Lori Griswold, Brian Dunkelberger, Michael R. Schwob, Sharang Chaudhry, Justin Zhan, Laxmi Gewali, Paul Oh

Computer Science Faculty Research

The human brain is a complex system of neural tissue that varies significantly between individuals. Although the technology that delineates these neural pathways does not currently exist, medical imaging modalities, such as diffusion magnetic resonance imaging (dMRI), can be leveraged for mathematical identification. The purpose of this work is to develop a novel method employing machine learning techniques to determine intravoxel nerve number and direction from dMRI data. The method was tested on multiple synthetic datasets and showed promising estimation accuracy and robustness for multi-nerve systems under a variety of conditions, including highly noisy data and imprecision in parameter assumptions.

Gene Co-Expression Analysis Of The Human Substantia Nigra Identifies Bmp2 As A Neurotrophic Factor That Can Promote Neurite Growth In Cells Overexpressing Wild-Type Or A53t Α-Synuclein, Susan R. Goulding, Aideen M. Sullivan, Gerard W. O'Keeffe, Louise M. Collins

Department of Biological Sciences Publications

Introduction: α-synuclein-induced degeneration of dopaminergic neurons has been proposed to be central to the early progression of Parkinson's disease. This highlights the need to identify factors that are neuroprotective or neuroregenerative against α-synuclein-induced degeneration. Due to their potent neurotrophic effects on nigrostriatal dopaminergic neurons, we hypothesized that members of the bone morphogenetic protein (BMP) family have potential to protect these cells against α-synuclein. Methods: To identify the most relevant BMP ligands, we used unbiased gene co-expression analysis to identify all BMP family members having a significant positive correlation with five markers of dopaminergic neurons in the human substantia nigra (SN). …

Wrap-Around Services To Older Adults With Dementia: Collaboration, Education, And Prevention As A Model For Integration Of Primary Care And Neurobehavioral Health, Gladys E. Maestre, Francisco Fernandez

School of Medicine Publications

Background: Medical care in the Rio Grande Valley (RGV) is fragmented and difficult to navigate, especially for older adults with cognitive decline and dementia. The communities are eager to have a new healthcare delivery system that integrate community-based aging services to provide integrated, team collaborative better health care in our communities. The University of Texas RGV School of Medicine, in collaboration with its affiliates in the regional healthcare systems, is a partner providing comprehensive care across the life-cycle bridging science, social services and patient care. Our interprofessional team collaborative emphasizes safe, appropriate, and effective neurobehavioral care, employing evidence-based medicine in …

Alpha Oscillations And Feedback Processing In Visual Cortex For Conscious Perception, Tony Ro

Publications and Research

Variability in perception between individuals may be a consequence of different inherent neural processing speeds. To assess whether alpha oscillations systematically reflect a feedback pacing mechanism for cortical processing during visual perception, comparisons were made between alpha oscillations, visual suppression from TMS, visual evoked responses, and metacontrast masking. Peak alpha oscillation frequencies, measured through scalp EEG recordings, significantly correlated with the optimum latencies for visual suppression from TMS of early visual cortex. Individuals with shorter alpha periods (i.e., higher peak alpha frequencies) processed visual information faster than those with longer alpha periods (i.e., lower peak alpha frequencies). Moreover, peak alpha …

A Quantitative Motor Assessment Linked To Underlying Damage In Traumatic Brain Injury, Paula K. Johnson

Theses and Dissertations

Traumatic brain injury (TBI) is a leading cause of disability in the United States (Coronado et al., 2011). There is a recognized need for better motor assessments to help mitigate these disabilities. Advances in markerless motion capture and in magnetic resonance imaging (MRI) provide an opportunity to improve clinical assessments, and link them to damage measured in MRI scans. The primary aims of this research were to 1) develop a quantitative motor assessment (QMA), and seed a normative database to enable comparison of impaired behavior to unimpaired, 2) test the sensitivity of the QMA, and 3) link QMA results to …

Comparison Of Nickel And Cobalt Induced Hypoxic Cell Models Using Cell Proliferation Assay, Melissa Delcasale

Seton Hall University Dissertations and Theses (ETDs)

Hypoxia is an imbalance in oxygen delivery and oxygen consumption, ultimately affecting cell survival. Low levels of oxygen diminish adenosine triphosphate synthesis resulting from a decline in oxidative phosphorylation in the mitochondria, therefore inducing apoptosis and cell death. To create a hypoxia mimicked environment, we used hypoxia mimetic compounds cobalt and nickel to treat human neuroblastoma (NMB) cells. Using hypoxic mimic human neuronal cell models, we examined and compared the effects of compound-induced hypoxia on NMB cell proliferation. The cells were treated with 100mM and 300mM concentrations of each compound at 24- and 48-hour intervals. To investigate cell proliferation, the …

The Dissociable Impact Of Auditory Vs. Visual Emotional Cues On Visual Processing, Emma K. Stewart Bsc, Derek Gv Mitchell Phd

Western Research Forum

Background: Emotional information has privileged access to processing resources, which can cause it to have a distracting or facilitating effect on task performance for reasons that are poorly understood. The sensory modality through which it is presented may be one determining factor. Some findings suggest that auditory stimuli facilitate visual task performance while visual stimuli interfere with it, but there are conflicting findings.

Hypothesis: We hypothesize that emotional content of a different sensory modality from the task improves task-related performance via a general alerting and arousing effect for all stimuli, while emotional content of the same modality disrupts performance when …

Neural Development To Neurodegeneration Through The Mind Of A Worm, Miranda Arnold

Master of Science in Integrative Biology Theses

Defects in the nervous system can impact the normal function of an organism. By examining mutations during neuronal development, we can better understand the significance of specific pathways. The EphR/ephrin pathway is crucial for axonal guidance during development. The simple organism, C. elegans, allow us to study the impact of EphR/ephrin genes on neuronal morphology, synapse connections, and basic behavior. In specific EphR/ephrin mutants, we see change in morphology and loss of synapses in a thermosensory and also a chemosensory circuit. These mutations can also lead to defects in food searching behaviors. These observations lead us to conclude that …

Optimization Of The Touchscreen-Based Visuomotor Conditional Learning Task In Mice, Oren Princz-Lebel, David I. Wasserman, Miguel Skirzewski, Penny A. Macdonald, Lisa M. Saksida, Tim J. Bussey

Western Research Forum

The translational gap between animal models and clinical trials is a longstanding, yet largely unresolved, limitation in the study of cognition. This discrepancy is largely due to the differences in how cognition is assessed in animal models compared to those in clinical populations. In the stimulus-response (S-R) learning literature, for example, the techniques used to assess the acquisition of habitual behaviour differ greatly across species, leading to poor cross-species translation and often conflicting results. As a result, we set out to optimize a S-R learning task in mice using the touchscreen-based operant technologies. Similar to human studies, this touchscreen technique …

Molecular Specialization Of Gabaergic Synapses On The Soma And Axon In Cortical And Hippocampal Circuit Function And Dysfunction, April Contreras, Dustin J. Hines, Rochelle M. Hines

Psychology Faculty Research

The diversity of inhibitory interneurons allows for the coordination and modulation of excitatory principal cell firing. Interneurons that release GABA (γ-aminobutyric acid) onto the soma and axon exert powerful control by virtue of proximity to the site of action potential generation at the axon initial segment (AIS). Here, we review and examine the cellular and molecular regulation of soma and axon targeting GABAergic synapses in the cortex and hippocampus. We also describe their role in controlling network activity in normal and pathological states. Recent studies have demonstrated a specific role for postsynaptic dystroglycan in the formation and maintenance of cholecystokinin …

A 24-Week Double-Blind Placebo-Controlled Study Of The Efficacy And Safety Of The Ampa Modulator S47445 In Patients With Mild To Moderate Alzheimer's Disease And Depressive Symptoms, Eileen M. Bulger, Sylvie Gouttefangeas, Sylvie Bretin, Stéphanie Galtier, Philippe Robert, Vjera Holthoff-Detto, Jeffrey Cummings, Maria Pueyo

School of Medicine Faculty Research

Introduction S47445 is a novel positive allosteric modulator of alpha-amino-3-hydroxy-5-methyl-4-isoxazole-propionic acid receptors that may emerge as a favorable candidate for the symptomatic treatment of cognitive and depressive disorders in patients suffering from Alzheimer's disease (AD) of mild to moderate severity and with depressive symptoms. Methods For this double-blind, placebo-controlled 24-week phase II trial, 520 outpatients aged between 55 and 85 years, with probable AD at mild to moderate stages (a Mini-Mental State Examination score of 24-15 inclusive) and exhibiting depressive symptoms (Cornell Scale for Depression in Dementia [CSDD] ≥ 8) were recruited in twelve countries and randomized to 3 doses …

Optimization Of Simultaneous Facial Emg And Fmri, Maggie Prenger

Western Research Forum

The scientific study of emotion began in the 19^th century with Duchenne’s study of the “universal and immutable” language of facial expressions. In The Mechanism of Human Physiognomy, he manipulates human facial expressions by electrically stimulating facial muscles. Facial electromyography (EMG) is a modern technique that is reminiscent of Duchenne’s work; it allows researchers to measure facial muscle activity through surface recording electrodes, providing a real-time measure of natural emotional reactions.

Although facial EMG is a reliable measure of emotional behavior, it fails to provide any information about brain activity responsible for emotional processes. Functional magnetic resonance imaging (fMRI) …

Spontaneous Mimicry Of Emotional Facial Expressions As A Function Of Trait Sadism, Cathleen Fleury, Mary Ritchie, Derek Mitchell

Western Research Forum

Using electromyography (EMG), it has been shown that facial muscles imperceptibly mirror the facial expressions of others, a phenomenon referred to as spontaneous facial mimicry. Facial mimicry may be involved in empathy processing, and is impaired in several empathy deficit disorders. It was previously believed to follow the direct-matching principle, a theory postulating that spontaneous facial mimicry involves the observer mirroring their partner’s expression exactly. However, several recent studies have demonstrated that context and individual differences may be influencing factors of spontaneous facial mimicry. In the present study, we propose to investigate the relationship between facial mimicry and empathy through …

Associations Between Comorbid Tdp-43, Lewy Body Pathology And Neuropsychiatric Symptoms In Alzheimer's Disease, Ece Bayram, Guogen Shan, Jeffrey L. Cummings

School of Public Health Faculty Research

More than half of the patients with Alzheimer’s disease (AD) have comorbidities including TDP-43 and Lewy bodies, which are also associated with frontotemporal lobar degeneration and dementia with Lewy bodies, respectively. These comorbidities may help explain the overlapping neuropsychiatric symptoms between AD and other dementias. Data on 221 AD patients with Neuropsychiatric Inventory-Questionnaire were obtained from the National Alzheimer’s Coordinating Center. TDP-43 was associated with aberrant motor activity, whereas Lewy bodies were associated with anxiety, irritability, sleep behavior, and appetite problems. The associations between these comorbidities and neuropsychiatric symptoms were more significant for patients with sparse diffuse plaques.

Caloric Restriction Alters Postprandial Responses Of Essential Brain Metabolites In Young Adult Mice, Lucille M. Yanckello, Lyndsay E. A. Young, Jared D. Hoffman, Robert P. Mohney, Mignon A. Keaton, Erin L. Abner, Ai-Ling Lin

Sanders-Brown Center on Aging Faculty Publications

Caloric restriction (CR) has been shown to extend longevity and protect brain function in aging. However, the effects of CR in young adult mice remain largely unexplored. In addition to the fundamental, long-term changes, recent studies demonstrate that CR has a significant impact on transient, postprandial metabolic flexibility and turnover compared to control groups. The goal of this study was to identify the brain metabolic changes at a transient (2 h) and steady (6 h) postprandial state in young mice (5–6 months of age) fed with CR or ad libitum (AL; free eating). Using metabolomics profiling, we show that CR …

Becoming The Good Shepherds, Eze Paez

Animal Sentience

It is very important that we clarify what we owe to nonhuman animals. To that end, we need a better understanding of animal cognition and emotion. Marino & Merskin’s target article is a welcome contribution to this project. Sheep, like most other animals, are sentient beings with interests of their own. It is wrong to discriminate against them based on species-membership or cognitive sophistication. We are morally required not to harm them, and to help them have the best possible lives, just as we would be in the case of human beings with similar interests. We must become the good …

How Music Therapy Effects The Traumatized Brain: Neurorehabilitation For Posttraumatic Stress Disorder Through Music Therapy, Jordan Winter Payne

Honors Projects

This review discusses the neurological components of posttraumatic stress disorder (PTSD) and how both structures and processes in the brain are altered in individuals with the disorder, specifically the neural network that includes the prefrontal cortex, the hippocampus, and the amygdala. This impacts awareness and responsiveness to stimuli. After examining these aspects, invasive and non-invasive treatment approaches are examined, with a specific emphasis on the treatment approach of music therapy. Musical stimuli are processed in many areas of the brain, so it has therapeutic potential for modulating neurological changes. Music therapy applies music clinically to address a variety of goals …

Neurobiological Effects Of Probiotic-Supplemented Diets In Acutely Stressed Male Long-Evans Rats: Evidence Of Enhanced Resilience, Nicholas Natale, Bilal Hindi, Peter Santore, Molly H. Kent, Kelly Lambert

Arts & Sciences Student Symposium

Introduction

~Considering that the human intestine is home to almost 100 trillion microorganisms including bacteria (Cryan, 2011), recent research has focused on the role of the microbiome in neurobiological functions such as stress, anxiety and coping responses.

~Focusing on animal models, previous findings indicate that modifications of the gut microbiota via antibiotics and certain probiotics alter the anxiety response via the vagus nerve & immune system mediation (MacQueen et al., 2017).

~Recently, the concept of Psychobiotics has been introduced to refer to the use of microbiota to positively influence mental health outcomes (Foster et al., 2017).

Alterations In Cortical Activation Among Individuals With Chronic Ankle Instability During Single-Limb Postural Control, Adam B. Rosen, Jennifer M. Yentes, Melanie L. Mcgrath, Arthur C. Maerlender, Sara A. Myers, Mukul Mukherjee

Center for Brain, Biology, and Behavior: Faculty Publications

Context: Chronic ankle instability (CAI) is characterized by repetitive ankle sprains and perceived instability. Whereas the underlying cause of CAI is disputed, alterations in cortical motor functioning may contribute to the perceived dysfunction.

Objective: To assess differences in cortical activity during single-limb stance among control, coper, and CAI groups.

Design: Cross-sectional study.

Setting: Biomechanics laboratory.

Patients or Other Participants: A total of 31 individuals (10 men, 21 women; age = 22.3 ± 2.4 years, height = 169.6 ± 9.7 cm, mass = 70.6 ± 11.6 kg), who were classified into control (n = 13), coper (n = 7), and CAI …

Basal Ganglia Involvement In The Playfulness Of Juvenile Rats, Stephen M. Siviy

Psychology Faculty Publications

Play is an important part of normal childhood development and can be readily studied in the laboratory rat in the form of rough‐and‐tumble play. Given the robust nature of rough‐and‐tumble play, it has often been assumed that the basal ganglia would have a prominent role in modulating this behavior. Recent work using c‐fos expression as a metabolic marker for neural activity combined with temporary inactivation of relevant corticostriatal regions and pharmacological manipulations of opioid, cannabinoid, and dopamine systems has led to a better understanding of how basal ganglia circuitry may be involved in modulating social play in the juvenile rat. …

Sense Of Community And Space, Amanda Corona

Celebration of Learning

Sense of community (SOC) is defined as a person’s experience of a group or specific area (Kenkmann et al, 1996). Physical spaces can affect SOC; small colleges have higher SOC on average than universities (Lounsbury & DeNeui, 1996). A person’s identity, especially ethnic identity, can also influence SOC (Rivas-Drake, 2012; Liu, 2005). However, there is less work on the intersection of physical space and ethnic identity (Devlin et al, 2008). This raises the questions: how does the experience of a community space affect someone’s SOC, and would it vary by ethnicity?

The relationship between communal spaces and identity can be …

Novel Characterization Of The Role Of Orthologous Xap5 In Caenorhabditis Elegans, Nabor Vazquez

Lawrence University Honors Projects

Cilia are one of the oldest and most well conserved cellular organelles. Cilia provide an essential role in cellular locomotion, fluid regulation, and are a site for signal transduction pathways involved in sensation. A new study suggests that XAP5 is a transcription factor in a unicellular organism, Chlamydomonas reinhardtii, which regulates gene expression needed for proper cilium assembly. Our study investigates the conservation of the role of XAP5 in a multicellular system, Caenorhabditis elegans. Alignments between protein, coding region, and promoter sequences for XAP5 orthologs from related species show a good conservation in DNA and protein sequences. As part of …

Sensory Perception, Adrian Rodriguez-Contreras

Open Educational Resources

Different types of sensory systems with their functional modalities will be presented. The biological bases for how these functions are generated and modified will then be described. As vision is the principal means of perception, we will focus in this course most on visual processing. Scientific data will be integrated into the lectures, such that students develop critical skills in analyzing data and proposing hypotheses.

Spirituality And The Infant Brain: Implications For Attachment Theory And Therapeutic Process Across The Life Span, Caitlin Eliasson

Consensus

No abstract provided.

Changes In Hemodynamic Response To Faces, Scenes, And Objects In A Visual Statistical Learning Task: An Fmri Analysis, Aaron T. Halvorsen

Honors Program: Senior Projects (Public)

Learning causes changes in brain activity and neural connections. Statistical learning is an implicit learning process that involves extracting regularities from the environment and finding patterns in stimuli based on their transitional probabilities. The following study describes an attempt to elucidate temporal changes in hemodynamic activity for three category-specific brain areas using functional magnetic resonance imaging (fMRI). Blood oxygen-level dependent signal (BOLD) responses were collected while subjects viewed faces, scenes, and objects with high and low transitional probabilities in an fMRI scanner. We expected brain activity to show a temporal shift in timing of activation when comparing BOLD signal responses …

Acc Theta Improves Hippocampal Contextual Processing During Remote Recall, Ryan A. Wirt, James M. Hyman

Psychology Faculty Research

Consolidation studies show that, over time, memory recall becomes independent of the medial temporal lobes. Multiple lines of research show that the medial frontal cortex, including the anterior cingulate cortex (ACC), is involved with contextual information processing and remote recall. We hypothesize that interactions between the ACC and hippocampal area CA1 will change as memories became more remote. Animals are re-exposed to multiple environments at different retention intervals. During remote recall, ACC-CA1 theta coherence increases, with the ACC leading area CA1. ACC theta regulates unit spike timing, gamma oscillations, and ensemble and single-neuron information coding in CA1. Over the course …

Investigating Neuroinflammation And Demyelination In The Nervous System Of Twitcher Mice By The Use Of Immunohistochemistry, Irene Wilson

Natural Sciences and Mathematics | Biological Sciences Master's Theses

Neuroinflammation and demyelination are the hallmark lesions of the Twitcher mouse—the model of Krabbe Disease. By analyzing hemibrains and sciatic nerves via immunohistochemistry, we supported the microglial hypothesis that early activation of microglial cells, macrophages, and globoid cells in the nervous system of Twitcher mice results in specific cellular polarization states that may contribute to myelin loss. The influx of activated macrophages seen in both the central and peripheral nervous systems at days 21 and 17, respectively, accounted for this polarization. Using selected M1 and M2 markers, YKL-40, and GPNMB and CD206, respectively, we proved that microglial cells and macrophages …

Targeted Genome-Scale Gene Activation And Gene Editing In Human Cells To Understand Disease Models, Michael De La Cruz

KGI Theses and Dissertations

Since the discovery of sequence directed DNA editing reagents such as CRISPR-Cas9 RNA-guided and TALEN DNA endonucleases, there has been a snowball of advances in the life sciences due to the ability to efficiently edit and control genomes within living cells. CRISPR-Cas9 based genomic tools, which facilitate the high-throughput precise manipulation of genes, allow for unbiased functional genomic screens. We used a human CRISPR-Cas9 Synergistic Activation Mediator pooled library which utilizes an engineered protein complex for transcriptional activation of 23,430 endogenous genes to investigate the development of novel resistance mechanisms to lung cancer targeted therapy, Erlotinib. We set out to …

Jet Lag: What’S Light Got To Do With It?, Melissa Richardson

Adventist Human-Subject Researchers Association

Jet lag results in memory loss and sleepiness. Current treatments for jet lag focus on symptoms and not the cause of jet lag; disrupted light environment. This study in mice, uncovered mechanisms of how light regulates jet lag recovery and memory. This work informs our future studies in humans.

Is The Selective Tuning Model Of Visual Attention Still Relevant?, John K. Tsotsos

MODVIS Workshop

No abstract provided.