Marine Biology Commons^™

Southeast Florida Coral Reef Evaluation And Monitoring Project 2007 Year 5 Final Report, Jennifer Wheaton, Michael Callahan, Jeff Beal, Chantal Collier, Laura Herren, Jamie Monty, Joanna Walczak, David S. Gilliam, Vanessa I. P. Brinkhuis, Allison S. Brownlee, Daniel P. Fahy, Shaun M. Gill, Elizabeth Goergen, Jenna R. Lueg, Lindsey Habakuk Klink, M. A. Philips, Nicole R. Stephens, Adam T. St. Gelais, Brian K. Walker, Richard E. Dodge, Tim Mcintosh, Steven Blair, Kenneth Banks, Louis E. Fisher, David Stout, Joe Ligas, Janet Phipps

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Limnological Assistance For The Lake Mead National Recreation Area In Meeting The Challenge Of The Water 2025 Initiative: Annual Report, Period Ending May 31, 2008, Margaret N. Rees

Limnological Studies

Hiring: Limnologist Dr. Wai Hing (David) Wong was hired and officially reported to work on 5/15/2008.

Project 1 and Project 2: Dr. Wong has commenced work on Projects 1 and 2.

Project 3: Dr. Wong has commenced work on Project 3. A comprehensive zebra/quagga mussel bibliography has been completed and published to the 100th Meridian Web site. Six interagency, multi-disciplinary quagga mussel meetings have been held. A quagga mussel substrate project has been initiated and, through the coordination efforts of this project, two other studies have been selected and refined to help determine the ecological impacts of quagga mussel infestation …

Pan-Arctic Patterns In Black Carbon Sources And Fluvial Discharges Deduced From Radiocarbon And Pah Source Apportionment Markers In Estuarine Surface Sediments, Marie Elmquist, Igor Semiletov, Laodong Guo, Örjan Gustafsson

Faculty Publications

A pan-arctic geospatial picture of black carbon (BC) characteristics was obtained from the seven largest arctic rivers by combining with molecular combustion markers (polycyclic aromatic hydrocarbons) and radiocarbon ((14)C) analysis. The results suggested that the contribution from modern biomass burning to BC ranged from low in the Yukon (8%) and Lena (5%) Rivers to high in the Yenisey River (88%). The Mackenzie River contributed almost half of the total arctic fluvial BC export of 202 kton a(-1) (kton = 10(9) g), with the five Russian-Arctic rivers contributing 10-36 kton a(-1) each. The (14)C-based source estimate of fluvially exported BC to …

A Nested Model Study Of The Loop Current Generated Variability And Its Impact On The West Florida Shelf, Alexander Barth, Aida Alvera-Azcarate, Robert H. Weisberg

Marine Science Faculty Publications

A West Florida Shelf model based on the Regional Ocean Modeling System (ROMS) is nested in the North Atlantic Hybrid Coordinate Ocean Model (NAT HYCOM). The focus of this work is the study of the impact of the Loop Current on the West Florida Shelf. In order to assess the model's accuracy, it is compared quantitatively to in situ temperature and velocity measurements on the shelf. A series of sensitivity experiments are conducted to determine the appropriate wind forcing, sea surface temperature relaxation, and mixing scheme. by the inclusion of the Loop Current, we are able to study the propagation …

A Systematic And Taxonomic Review Of The Family Pseudotanaidae (Crustacea: Peracarida: Tanaidacea) Based Primarily On Morphometry Cladistic Analyses, Jerry Alan Mclelland

Dissertations

Species of the tanaid family Pseudotanaidae, established by Jurgen Sieg in 1973, have been reported from all the world's oceans in depths ranging from near the surface to below 6,000 m. The family currently consists of 46 characteristically small tanaidomorph species residing in two subfamilies, the Cryptocopinae (seven species) and the Pseudotanainae (39 species). Members of the more ancestral Crytocopinae differ from the Pseudotanainae by having females with four rather than three antennule articles and a complete separation of the maxilliped endites. The primary objective of this study was to test the hypothesis that the current structure of the family …

Evaluating Vascular Plant Composition And Species Richness On Horn Island, Mississippi, Using Passive And Active Remote Sensing In Conjunction With Ground Based Measurements, Kelly Lynn Lucas

Dissertations

Barrier island vegetation is subjected to chronic abiotic stressors combined with periodic storm events that favor species adapted to harsh environments. These islands are the first landforms to be affected by changes in coastal subsidence and sea-level rise. Evaluating changes in vegetation is important for understanding the impact of global climate change on coastal environments.

This study assesses vegetation composition and plant species richness on Horn Island, Mississippi using ground data in conjunction with remotely sensed spectral and LIDAR data. The goals of this research are to: 1) classify and map vegetation composition on Horn Island using hyperspectral and LIDAR …

Nhep Year 13 Work Plan, Jennifer Hunter

PREP Reports & Publications

The New Hampshire Estuaries Project (NHEP) is part of the U.S. Environmental Protection Agency’s (EPA’s) National Estuary Program which is a joint local/state/federal program established under the Clean Water Act with the goal of protecting and enhancing nationally significant estuaries. The NHEP’s Comprehensive Conservation and Management Plan (Management Plan)for New Hampshire’s estuaries was completed in 2000 and updated in 2005. The Management Plan outlines key issues related to management of New Hampshire’s estuaries and proposes strategies (Action Plans) to protect, enhance, and monitor the state’s estuarine resources. Local stakeholders established the NHEP’s priorities, which include water quality improvements, shellfish resource …

Transmission Of Panulirus Argus Virus 1 (Pav1) And Its Effect On The Survival Of Juvenile Caribbean Spiny Lobster, Mark J. Butler Iv, Donald C. Behringer Jr., Jeffrey D. Shields

Biological Sciences Faculty Publications

The Caribbean spiny lobster Panulirus argus, an important fisheries species, is host to Panulirus argus virus 1 (PaV1), a lethal, unclassified virus-the first found in any species of lobster-prevalent in juvenile lobsters. We describe a series of laboratory experiments aimed at assessing the likely modes of disease transmission, determining the survival of lobsters relative to each transmission pathway and identifying potential alternate hosts. Given evidence for lower prevalence of PaV1 in large lobsters, the effect of lobster size on susceptibility was also examined. Results demonstrated that PaV1 can be transmitted to juvenile lobsters via inoculation, ingestion of diseased tissue, contact …

Rapid Evolution In Introduced Species, ‘Invasive Traits’ And Recipient Communities: Challenges For Predicting Invasive Potential, Kenneth D. Whitney, Christopher A. Gabler

School of Earth, Environmental, & Marine Sciences Faculty Publications

The damaging effects of invasive organisms have triggered the development of Invasive Species Predictive Schemes (ISPS). These schemes evaluate biological and historical characteristics of species and prioritize those that should be the focus of exclusion, quarantine, and/or control. However, it is not clear how commonly these schemes take microevolutionary considerations into account. We review the recent literature and find that rapid evolutionary changes are common during invasions. These evolutionary changes include rapid adaptation of invaders to new environments, effects of hybridization, and evolution in recipient communities. Strikingly, we document 38 species in which the specific traits commonly associated with invasive …

Marine Science Assessment Of Capture-Based Tuna (Thunnus Orientalis) Aquaculture In The Ensenada Region Of Northern Baja California, Mexico, José A. Zertuche-González, Oscar Sosa-Nishizaki, Juan G. Vaca Rodriguez, Raul Del Moral Simanek, Charles Yarish, Barry A. Costa-Pierce

Publications

Final Report of the Binational Scientific Team to the Packard Foundation.

Prime Wetland Designation Activities, Dave Kellam

PREP Reports & Publications

In 2008, Prime Wetland Designations (PWDs) were on the town ballot in the towns of Fremont, Hampton Falls, Brentwood, and Newfields. Three of the four passed (Appendix A); however, the Town of Newfields’ proposed designation was not approved due to significant opposition in the community (Appendix B). Portsmouth City Council will decide whether to designate the wetlands identified by their PWD report in the late spring or summer of 2008. This report documents the NHEP and community efforts to adopt PWD and offers insight into the unique situations of each community that may assist other communities in the PWD process. …

Protecting Shoreland And Riparian Buffers Workshop (2007), Jennifer Hunter

PREP Reports & Publications

The New Hampshire Estuaries Project (NHEP) organized and implemented a workshop on protecting shoreland and riparian buffers. A number of other organizations, including three regional planning commissions, NH Fish and Game Department, NH Department of Environmental Services, Great Bay National Estuarine Research Reserve, and UNH Cooperative Extension, were involved in the planning and execution of the workshop. The workshop was designed to provide information and tools to encourage greater municipal regulatory protections for buffers. The workshop was held three times in October and November 2007 and attended by 75 people, primarily planning board and conservation commission members.

The State Of Coral Reef Ecosystems Of Southeast Florida, Chantal Collier, Rob Ruzicka, Kenneth Banks, Luiz Barbieri, Jeff Beal, David Bingham, James A. Bohnsack, Sandra Brooke, Nancy Craig, Richard E. Dodge (Editor), Louis E. Fisher, Nick Gadbois, David S. Gilliam, Lisa Gregg, Todd Kellison, Vladimir N. Kosmynin, Brian Lapointe, Erin Mcdevitt, Janet Phipps, Nikki Poulos, John Proni, Patrick Quinn, Bernhard Riegl, Richard E. Spieler, Joanna Walczak, Brian K. Walker, Denise Warrick

Marine & Environmental Sciences Faculty Reports

No abstract provided.

Spring 2008, Nsu Oceanographic Center

Currents

No abstract provided.

Influences Of The Loggerhead Sponge (Spheciospongia Vesparium) And The Vase Sponge (Ircinia Campana) On Nearshore Hard-Bottom Community Development In The Florida Keys, Scott Donahue

Biological Sciences Theses & Dissertations

Sponges, octocorals, and stony corals are the dominant sessile fauna within shallow, hard-bottom communities in the Florida Keys, FL (USA). The sponge component of these communities is not well studied and has been cyclically decimated from as early as 1844, most recently in south-central Florida Bay in 1991 and 1992, in apparent association with phytoplankton blooms. The purpose of this research was to examine ways in which sponges may contribute to the maintenance of hard-bottom communities. Specifically, I investigated: 1) the effect of sponges and physical structures on local sea floor scouring and thus the potential for maintenance of hard-bottom; …

Spatial And Trophic Dynamics Of A Macrofaunal Community On A High Energy Intertidal Sandflat, Sharon Ann Tatem

Biological Sciences Theses & Dissertations

Spatial and trophic interactions between macrofaunal species were studied in a high energy intertidal system during spring-summer low tides. Bioturbation by the enteropneust hemichordate, Balanoglossus aurantiacus (Girad), as evidenced by large fecal mounds, was a conspicuous feature on the sandflat Sediment characteristics were compared between ambient (non-fecal) and B. aurantiacus fecal mound types (fresh-oxidized, fresh-reduced, aged-oxidized, and aged-reduced). Fecal material was differentiated by age based on the presence or absence of mucus and the time of fecal deposition. The color of fecal material was used to assign oxidative state. Multiple isotopes (carbon, nitrogen, sulfur) were used to determine the origins …

New Records, Biogeography, And Habitat Protection Needs Of Four Species Of Potamon (Decapoda: Brachyura) In Greece, Eugene G. Maurakis, David V. Grimes

Virginia Journal of Science

Objectives are to determine the occurrence of species of Potamon in eastern Crete and the Aegean Islands (Chios, Naxos, Paros, Mykonos, Tinos and Andros); generate phylogenetic relationships among species to propose a biogeographic hypothesis relative to current distributions of the four species of the freshwater crab genus, Potamon, in Greece; and comment on the need to protect habitat suitable for the survival of species of Potamon in the country. Our collections, made in areas not previously sampled by researchers, indicate the presence of Potamon fluviatile on Tinos, N axos, and Andros, and Potamon potamios from central to eastern Crete; …

Hurricane Katrina Winds Measured By A Buoy-Mounted Sonic Anemometer, Stephan D. Howden, David Gilhousen, Norman Guinasso, John Walpert, Michael Sturgeon, Les Bender

Faculty Publications

The eye of Hurricane Katrina passed within 49 n mi of an oceanographic observing system buoy in the Mississippi Bight that is part of the Central Gulf of Mexico Ocean Observing System. Although a mechanical anemometer failed on the buoy during the hurricane, a two-axis sonic anemometer survived and provided a complete record of the hurricane's passage. This is the first reported case of a sonic anemometer surviving a hurricane and reporting validated data, and it demonstrates that this type of anemometer is a viable alternative to the mechanical anemometers traditionally used in marine applications. The buoy pitch and roll …

2007 Great Bay Water Quality (Datasonde) Monitoring Program, Jonathan Pennock

PREP Reports & Publications

In situ water quality assessment has become an important source of data for monitoring, research and management activities in estuaries nationwide. As part of the National Estuarine Research Reserve System, the Great Bay System-Wide Monitoring Program (SWMP) produces in situ water quality data for four sites in and around Great Bay. This project extends the SWMP program to include year-round in situ data for a station at the University of New Hampshire Coastal Marine Lab pier at the mouth of the Piscataqua River and summmer data for a station in the Salmon Falls (SF) River. This suite of stations provides …

2007 Great Bay Organic Nitrogen And Light Extinction Monitoring Program, Jonathan Pennock

PREP Reports & Publications

Nitrogen is most often considered to be the limiting nutrient for plant growth in marine waters. As a result, knowledge of nitrogen loading and ambient water-column concentrations are considered to be critical to understanding the response of aquatic ecosystems to nutrient over-enrichment—a process known as eutrophication when it results in the excess production of organic matter. Plant production in many estuarine systems may also be limited by light availability as a result of high levels of turbidity in the water resulting from sediments, dissolved organic matter, and phytoplankton in the water column. Light limitation resulting from human-induced increases in turbidity …

Mercury Transport And Bioaccumulation In The Alvarado Lagoon System, Veracruz State, Mexico, Edward O. Keith, Jane L. Guentzel

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Alvarado Lagoon System (ALS) consists of shallow rivers and lagoons connected to the Gulf of Mexico (GOMEX) by a narrow channel. We collected samples of water and seafood in the wet (September 2005) and dry (March 2003 and 2005) seasons, and human hair and sediment in 2005. Total Hg in sediments ranged from 27.5 to 90.5 μg Hg/g dry weight, while fish and shellfish Hg levels ranged from 0.01 to 0.35 μg Hg/g wet weight. Total Hg in human hair ranged from 0.10 to 3.36 μg Hg/g (n = 47) and 58 % of the hair samples were above …

Fisheries Research Report No. 170 - Biomass And Commercial Catch Estimates For Abalone Stocks In Areas Proposed As Sanctuary Zones For The Capes Marine Park, A. Hesp, Neil R. Loneragan, Norman G. Hall, H T. Kobryn, A.M. Hart, Frank Fabris, Jeremy Prince

Fisheries Research Reports

This study was undertaken to estimate the biomasses, biologically sustainable catches and current average annual commercial catches of three fished species of abalone, Haliotis roei (Roei), Haliotis laevigata (Greenlip) and Haliotis conicopora (Brownlip) in the proposed sanctuaries of the Capes Marine Park, south-western Australia. The current annual, catch estimates represent the catches that would be foregone by commercial fishers if the sanctuaries are implemented and will be used to evaluate the potential compensation to fishers (not part of this study). The biomass and catch estimates for each species in the proposed sanctuaries were estimated from a combination of scientific survey …

Fisheries Research Report No. 173 - Evaluation Of The Effectiveness Of Reducing Dolphin Catches With Pingers And Exclusion Grids In The Pilbara Trawl Fishery, Peter Stephenson, S. Wells

Fisheries Research Reports

Final FRDC Report – Project 2004/068

“Savewave” acoustic pingers were trialed on one vessel to determine if they would deter dolphins entering the trawl net. During daylight hours, the pingers were deployed on alternate shots in the configuration recommended by the manufacturer. On the other alternate shots, no pingers were deployed. A video camera in an underwater housing was attached to the headrope facing downstream for 18 trawl shots. On the 14 shots where usable video footage was obtained (11 with pingers deployed and 7 with pingers not deployed) the number of dolphins viewed in the camera frame was counted …

Who's Eating Whom? Identification And Quantification Of Deep-Pelagic Prey Fishes In The North Atlantic Ocean, A. Heger, Tracey Sutton

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Understanding the structure and functioning of marine ecosystems requires accurate knowledge of trophic interactions. Trophic ecology studies generally underestimate prey diversity due to the difficulties imposed by digestion. Further, this degradation leads to uncertainty in the quantification of prey biomass (i.e., energy flow between various ecosystem components). Trophic interactions in the deep sea are poorly known relative to coastal ecosystems due to an incomplete inventory of meso-and bathypelagic species composition. The CoML field project MAR-ECO has increased our knowledge of the faunal structure of the mid-North Atlantic. Deep-pelagic fish specimens from the 2004 MARECO expedition provided a basis for an …

Bathypelagic Fish Diversity In The Sargasso Sea, Northwestern Atlantic Ocean, Tracey Sutton, Peter Wiebe, Ann Bucklin, Laurence P. Madin

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Of the various marine habitats, one of the (if not the) most daunting to quantify is the under-sampled bathypelagic zone (> 1000 m depth), which at 60% of the ocean’s volume is the largest habitat on Earth. One project addressing this challenge is the Census of

Marine Zooplankton (CMarZ), whose goal is the assessment of biodiversity of animal plankton throughout the world’s oceans. The 2006 CMarZ cruise in the Western North Atlantic provided an unprecedented opportunity to sample bathypelagic micronekton using a large midwater trawl (10-m2 MOCNESS) outfitted with fine (0.335-mm) mesh netting. This netting allowed non-destructive sampling of the …

The Importance Of Stealth: Recent Findings With The Eye-In-The-Sea Deep-Sea Observatory, Edith A. Widder, E. H. Raymond, Tracey Sutton

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Eye-in-the-Sea (EITS) observatory was designed to be acoustically quiet and to use far-red illumination to observe deep-sea animals unobtrusively. The EITS has clearly demonstrated the critical importance of stealth in research ocean observatories. Its use has revealed both animals and behaviors never seen before. Additionally recordings of animal activity under different lighting conditions and in the presence or absence of different sound-producing vehicles (ROVs and submersibles) have revealed to what extent tools for exploration bias observations. Recent recordings made during a 2007 NOAA Ocean Exploration mission to deep waters around the Bahamas provide excellent additional examples of the importance …

(2008) Wellhead Protection Program - Lary Lane, Gilman, And Stadium Wells In The Town Of Exeter, Nh, Wellhead Protection Program

PREP Reports & Publications

A Wellhead Protection Program (WHPP) identifies existing and potential sources of contamination to public water supply wells. The purpose of a WHPP is to prevent contamination of groundwater used for drinking water, recognizing the best way to maintain high quality drinking water is to prevent contaminants from reach drinking water sources. The Federal Safe Drinking Water Act requires states to develop Wellhead Protection Programs. New Hampshire’s Groundwater Protection Act, NH RSA 485-C, provides the basis for protection in New Hampshire. The Town of Exeter, New Hampshire has developed this WHPP for three wells, the Lary Lane well, the Gilman well, …

Seasonal Variability Of The Observed Barrier Layer In The Arabian Sea, Pankajakshan Thadathil, Prasad Thoppil, R.R. Pao, P.M. Muraleedharan, Y.K. Somayajulu, V.V. Gopalakrishna, Raghu Murtugudde, G.V. Reddy, C. Revichandran

Faculty Publications

The formation mechanisms of the barrier layer ( BL) and its seasonal variability in the Arabian Sea ( AS) are studied using a comprehensive dataset of temperature and salinity profiles from Argo and other archives for the AS. Relatively thick BL of 20-60 m with large spatial extent is found in the central-southwestern AS ( CSWAS), the convergence zone of the monsoon wind, during the peak summer monsoon ( July-August) and in the southeastern AS ( SEAS) and northeastern AS ( NEAS) during the winter ( January-February). Although the BL in the SEAS has been reported before, the observed thick …

Testing Of Great Bay Oysters For Two Protozoan Pathogens, John I. Nelson

PREP Reports & Publications

Two protozoan pathogens, Haplosporidium nelsoni (MSX) and Perkinsus marinus (Dermo) are known to be present in Great Bay oysters. With funds provided by the New Hampshire Estuaries Project (NHEP), the Marine Fisheries Division of New Hampshire Fish and Game Department, (NHF&G) continues to assess the presence and intensity of both disease conditions in oysters from the major beds, some open for harvest, within the Great Bay estuarine system. Histological examination of Great Bay oysters has also revealed other endoparasites.

Comment On "How Accurate Are (234)Th Measurements In Seawater Based On The Mno(2)-Impregnated Cartridge Technique?'' By Pinghe Cai Et Al., Chin-Chang Hung, S. Bradley Moran, J. Kirk Cochran, Laodong Guo, Laodong Guo, Peter H. Santschi

Faculty Publications

No abstract provided.