Marine Biology Commons^™

Effects Of A Severe Cold Event On The Subtropical, Estuarine-Dependent Common Snook, Centropomus Undecimalis, Aaron J. Adams, Jessica E. Hill, Benjamin N. Kurth, Andrew B. Barbour

Gulf and Caribbean Research

The effects of infrequent disturbance events on marine fishes are often difficult to determine, due largely to lack of sufficient pre- and post-disturbance event data. In January 2010, subtropical southwestern Florida (USA) experienced extreme cold for 13 days, which caused extensive mortality of many fish species. The effect of this severe cold event on common snook (Centropomus undecimalis), an economically important gamefish, was assessed using three years (2007-2009) of pre-event and one year (2010) of post-event data from a tag-recapture program conducted over 28 km of Gulf of Mexico barrier islands of Florida. All metrics pointed to a …

Early Growth Of Three Kingfish (Menticirrhus) Species Found In Coastal Waters Of The Northern Gulf Of Mexico, E. John Anderson, Bruce H. Comyns, Harriet Perry, Chet F. Rakocinski

Gulf and Caribbean Research

Southern kingfish (Menticirrhus americanus), gulf kingfish (M. littoralis), and northern kingfish (M. saxatilis) are members of the drum family (Sciaenidae) that are widespread in coastal habitats of the western Atlantic, including in the Gulf of Mexico (GOM). Despite their economic and ecological importance, little is known about growth of young kingfish. Young kingfish were collected from four different Mississippi shoreline habitats in 2005 and 2006; two associated with barrier islands and two along the mainland. Barrier island habitats included surf zones on the south shore and grass beds on the north shore. Mainland habitats …

Flexible Feeding Strategies Of Juvenile Gray Triggerfish (Balistes Capriscus) And Planehead Filefish (Stephanolepis Hispidus) Within Sargassum Habitat, Sarah E. Ballard, Chet F. Rakocinski

Gulf and Caribbean Research

Sargassum-associated juvenile gray triggerfish and planehead filefish exhibited flexible feeding strategies in terms of their use of epifauna or pelagic zooplankton. Four diet samples represented instances of co-occurrence and segregated occurrence. Co-occurring gray triggerfish had the most specialized diets consisting mainly of pelagic copepods and hyperiid amphipods. Conversely, segregated triggerfish as well as both co-occurring and segregated filefish had broader diets mainly consisting of Sargassum epifauna, such as bryozoans, portunid crabs, and hippolytid shrimp. Still, co-occurring planehead filefish also consumed somewhat more zooplankton than segregated planehead filefish. Ontogenetic diet transitions were not as distinct for gray triggerfish as for …

A New Baseline For Diadema Antillarum, Echinometra Viridis, E. Lucunter, And Eucidaris Tribuloides Populations Within The Cayos Cochinos Mpa, Honduras, Paul A.X. Bologna, Lucy Webb-Wilson, Patrick Connelly, James E. Saunders

Gulf and Caribbean Research

We investigated the density of 4 urchin species from 5 shallow reefs in the Cayos Cochinos Marine Protected Area in Honduras. Individual species density varied among reefs with total urchin density ranging from 3.2–7.9 individuals/m². Echinometra viridis (Agassiz, 1863) was the numerically dominant species (2.29/m²) followed by E. lucunter (Linnaeus, 1758) (1.76/m²) with Eucidaris tribuloides (Lamarck 1816) representing the fewest individuals (0.42/m²). Our results indicated that density of Diadema antillarum (Philippi, 1845) differed significantly among reefs (0.4-1.3/m², mean = 0.63/m²), but are three times greater than data collected …

Using The Fishes Of Texas Project Databases And Recent Collections To Detect Range Expansions By Four Fish Species On The Lower Coastal Plain Of Texas, F. Douglas Martin, Adam E. Cohen, Dean A. Hendrickson

Gulf and Caribbean Research

The Fishes of Texas project online database is a large, freely available quality controlled fish occurrence database of museum vouchered specimens. We used data from it, the same project’s separate database of occurrences extracted from published literature and our own recent survey data to examine range stability for four fish species inhabiting the Texas Lower Coastal Plain: Fundulus chrysotus, Fundulus jenkinsi, Heterandria formosa and Poecilia formosa. A weakness of our data is that they consist of presences only and species absences can only rarely be inferred. To help adjust for this we used common widespread species as …

Discrimination Of Juvenile Red Snapper Otolith Chemical Signatures From Gulf Of Mexico Nursery Regions, Michelle Zapp Sluis, Beverly K. Barnett, William F. Patterson Iii, Alan M. Shiller

Faculty Publications

Age-0 red snapper Lutjanus campechanus from the 2005-2007 year-classes were sampled in six regions across the Gulf of Mexico (Gulf) to develop nursery signatures from otolith element : Ca ratios (Ba:Ca, Mg:Ca, Mn:Ca, Sr:Ca, and Li:Ca) and stable isotope delta values (delta C-13 and delta O-18). Element : Ca ratios were analyzed with sector field inductively coupled plasma mass spectrometry on dissolved right sagittae; isotope ratio mass spectrometry was employed to analyze pulverized left otoliths for delta C-13 and delta O-18. Otolith chemical signatures were significantly different among regions in each year. Year-class-specific quadratic discriminant function analysis (QDFA) distinguished nursery …

A Western Range Extension For Caprella Scaura (Amphipoda: Caprellidae) In The Aransas Bay Ecosystem, Texas, Nicholas L. Ahrens, Faye P. Grubbs

Gulf and Caribbean Research

During March 2009, the skeleton shrimp Caprella scaura and Paracaprella tenuis (Amphipoda: Caprellidae) were collected from several locations throughout the Aransas Bay, Texas ecosystem from Texas Parks and Wildlife fishery—independent trawl and oyster dredge samples. This is a western range expansion for C. scaura; P. tenuis has been reported from this area before. Both species were exclusively associated with a bryozoan, Bugula neritina. Densities of both species ranged between 0.1–3.4 individuals per gram of attached bryozoans. A reproductive population is likely established since several sizes, including adult males and gravid females, were observed. No caprellids were observed after …

Evidence Of Spawning Capable Tarpon (Megalops Atlanticus) Off The Louisiana Coast, William Stein Iii, Nancy J. Brown-Peterson, James S. Franks, Martin T. O'Connell

Gulf and Caribbean Research

Despite the fact that the tarpon (Megalops atlanticus) is a popular sport fish in the Gulf of Mexico (GOM; Ault et al. 2008), little is known of its spawning behavior. Spawning M. atlanticus have never been documented and fertilized eggs have not been observed in situ (Ault et al. 2008). While it has been suggested that adult M. atlanticus move to deep water off the southwest coast of Florida and into the Yucatan Channel to spawn, the actual locations of spawning grounds remain unknown (Smith 1980, Crabtree et al. 1995, Crabtree et al. 1997). Distribution patterns of larvae …

Thermal Tolerance Of Age-0 Gulf Of Mexico Striped Bass (Morone Saxatilis): Ontogenetic And Genetic Effects, Corey Robert Anderson

Master's Theses

Striped bass, Morone saxatilis, were historically abundant in the Gulf of Mexico region but were largely extirpated from most Gulf rivers by the early 1960s. Since 1967 hatchery stocking has supported populations in Mississippi rivers and to date there is no evidence of natural reproduction. Intolerance of striped bass to high water temperature is a potential factor negatively impacting Gulf striped bass survival and reproductive fitness, and may be a limiting factor to reintroduction of the species in Mississippi. This work contributed to restoration efforts by establishing molecular tools necessary for genetic monitoring of striped bass restoration, and evaluating …

Phytoplankton Abundance And Species Composition In Relation To Environmental Paramenters In Coastal Mississippi Waters, Luz Karime Molina

Master's Theses

Phytoplankton pigments from Coastal Mississippi waters were measured to determine the spatial and temporal distributions and composition of phytoplankton communities. Concentration of phytoplankton pigments were analyzed using High Performance Liquid Chromatography (HPLC) and the compositional changes in phytoplankton communities were determined with CHEMTAX 1.95. Surface water was collected for two years (September 2007-November 2009) at three sampling sites on a monthly basis. The stations were located at the Bay of St. Louis (station 1), the Mississippi Sound (station 4) and the Mississippi Bight (station 8), following a salinity gradient. A time series of the observations documented the variability of different …

Quantifying Rates Of Autocompaction In The Pearl River Marsh, Louisiana, Jeremiah Nicholas Prouhet

Master's Theses

Annual rates of shallow autocompaction (< 1 m) were calculated in the upper ~one meter of sediment from six cores of a transect in the Pearl River Marsh (PRM), Louisiana, in order to determine the most significant sedimentary property controlling this process. Compaction-free wedge cores were sub-sampled at one centimeter intervals to collect the following data: age control, using 137Cs and 210Pb, and sedimentary variables, specifically, particulate organic carbon, bulk density, median grain size, porosity, and water content. An upper and an underlying sedimentary unit (named the 137Cs and 210Pb units) were defined between radiometric datum levels, and their sedimentary properties were statistically tested for significant differences using the non-parametric Mann-Whitney test. Rates of autocompaction were calculated from the model of Williams (2003), and both rates of autocompaction and sedimentation were tested for significant differences between the upper and lower sedimentary units.

The upper unit in the six cores generally had lower bulk density, higher water content, higher porosity, and higher particulate organic carbon than the underlying unit, but with some interesting exceptions. Additionally, annual autocompaction and sedimentation rates were greatest in the overlying unit at stations PR02 (0.39 ± 0.05 cm/y) and PR05 (0.42 ± 0.03 cm/y) and greatest in the underlying unit at stations PR02 (0.22 ± 0.08 cm/y) and PR03 (0.18 ± 0.06 cm/y). Based on Spearman correlations, rates of autocompaction were most strongly correlated to and influenced by rates of sedimentation rather …

Measuring And Comparing Quantum Yield In Two Species Of Marine Diatoms Subjected To Constant And Fluctuating Light Conditions, Matthew Leon Stone

Master's Theses

A small-scale study was conducted to determine the effects of light fluctuations on the photosynthetic efficiency of marine phytoplankton. Two species, Phaeodactylum tricornutum and Chaetoceros gracile were grown in specialized photobioreactors on a 12-hour:12-hour light:dark cycle. The cultures were diluted 50% daily to attain a specific growth rate of 0.70 d-1. To simulate vertical mixing in high turbidity habitats under various wind conditions, dense cultures were subjected to fluctuating light treatments with frequencies ranging from 0.10 Hz to 2.00 Hz. Parallel experiments subjected the cultures to static light conditions with equal total daily light doses as those of the cultures …

The Use Of Computed Tomography To Measure Biogenic Structures In Recently Hypoxic And Normoxic Sediments On The Louisiana Continental Shelf, Valerie Ann Hartman

Master's Theses

Over the past 60 years, seasonal hypoxia in the northern Gulf of Mexico has occurred with increased severity and over a greater area. To determine if biogenic structures in the northern Gulf of Mexico vary in response to hypoxic stress, the seafloor on the continental shelf of Louisiana was analyzed during the spring and fall of 2009 at four provinces of similar sediment type that differ in recent history of bottom water oxygen concentration. Subcores were analyzed by computed tomography (CT) to determine the number, diameter, length, volume, surface area, and depth of biogenic burrow structures in sediments where biogenic …

Dissolved And Colloidal Element Transport Through The Coastal Transition Zone, Moo Joon Shim

Dissertations

There are several factors (e.g., hurricanes, floodplain, and anthropogenic sources) that could modify trace element behavior through the coastal transition zone (CTZ). However, there is still a lack of information about these variables in affecting trace elements in the CTZ. For this study, water samples were collected in the Pearl River (PR), Bay of St. Louis (BSL), and the Mississippi River plume to study the effects of these factors on trace element.

A possible effect of Hurricane Katrina on water quality was examined in the East Pearl River (EPR). Hurricane Katrina could have resulted in increased inputs of organic matter …

An Analytical Study Of Air-Sea Co2 Gas Exchange In The Northwest Mississippi Bight Region, Andrea Kathryn Braatz

Master's Theses

With the continued increase of carbon dioxide (CO2) emissions, researchers are concerned with accumulation of excess CO2 within the atmosphere. The ocean is an important sink for the drawdown of atmospheric CO2 concentrations. Due to high spatial and temporal variability, CO2 fluxes in the coastal ocean are not as well characterized as those for the open ocean. More specifically, data for the northern Gulf of Mexico (GOM) coastal region is lacking. A time series analysis of air-sea CO2 flux rates from May through December 2009 was conducted using data collected by The University of Southern Mississippi’s Central Gulf Ocean Observing …

Temporal And Spatial Variability Of Phytoplankton Biomass In Coastal Mississippi Waters, Lorin Matthew Dornback

Master's Theses

Chlorophyll concentrations were measured in western Mississippi coastal waters to determine the spatial and temporal variability of phytoplankton. Nutrients (nitrate, silicate, phosphate), river discharge, temperature, salinity, stratification, tides, currents and winds were measured in concert with the phytoplankton concentrations. The purpose of this study was to determine the seasonal variability in phytoplankton and what was driving the variability. This study was comprised of a three year (September 2007-November 2010) time series where samples were taken once a month for eight stations. Profiles of each station were taken using a Conductivity, Temperature and Depth (CTD) sensor and a WET Labs FL-3 …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

Feeding Selectivity And Habitat Usage Of Esox Americanus, Scott Richard Clark

Master's Theses

Patterns of piscine prey selection and habitat usage of Esox americanus were assessed through a series of field and experimental studies. Although few detailed studies exist on the foraging behavior and habitat usage of E. americanus, throughout its range it may be an important trophic component in maintaining fish assemblage structure in many lower order streams. Across 17 sampled streams, the presence of E. americanus among reaches within streams was found to be strongly correlated with increasing levels of habitat complexity. Reaches occupied by E. americanus featured increased amounts of in-stream physical structure, increased variability in stream width and …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

Trade-Offs Between Gear Selectivity And Logistics When Sampling Nekton From Shallow Open Water Habitats: A Gear Comparison Study, Ronald Baker, Thomas J. Minello

Gulf and Caribbean Research

We compared logistical issues and the catch composition, density, and size structure of nekton samples collected with a drop sampler, benthic sled, and a fine mesh cast net in shallow non-vegetated habitats of Galveston Bay, Texas. Approximately 16 cast net replicates were collected and sorted for every one drop or benthic sled sample. The drop sampler collected the greatest number of species and provided the highest density estimates for the majority of crustaceans and small demersal fishes; the sled provided comparable density estimates for penaeids and small demersal nekton, while under-representing more mobile fishes. Densities of small benthic nekton were …

Odd Association And Range Extension Of Caligus Rufimaculatus Wilson, 1905; Caligidae, Siphonostomatoida, Copepoda, G.W. Benz, E.C. Greiner, S.R. Bowen, L. Goetz, N. Evou

Gulf and Caribbean Research

The Caligidae (Siphonostomatoida, Copepoda) comprises more than 465 parasitic species, over 250 of which belong to Caligus Müller, 1785 (Boxshall and Halsey 2004). Caligus spp. are primarily marine; but some representatives routinely inhabit brackish or fresh water (Margolis et al. 1975). Some Caligus spp. have been widely reported from several oceans, others have been documented from a single location, and a few have only been collected as free-swimming individuals not associated with a host (Margolis et al. 1975). Caligus spp. range from being stenoxenous to euryxenous, with most species infecting actinopterygians (Actinopterygii), a much smaller group exclusively or non-exclusively infecting …

Observations At A Multispecies Parrotfish (Scaridae) Spawning Aggregation Site At Bermuda With Notes On The Predation Behavior Of Black Grouper (Mycteroperca Bonaci), Brian E. Luckhurst

Gulf and Caribbean Research

The objective of the present study was to describe the spawning behavior of three different species of parrotfishes at the same spawning aggregation site with detailed timing sequences. In addition, observations of other species known to form resident spawning aggregations (i.e., surgeonfishes) and the predatory behavior of black grouper (Mycteroperca bonaci) at this aggregation site are included.

A 50 Year Accomplishment In Marine Science: A History Of The Journal Published By The Gulf Coast Research Laboratory, Mark S. Peterson, Nancy J. Brown-Peterson, Sara E. Lecroy, Joyce M. Shaw, James S. Franks, Richard W. Heard

Gulf and Caribbean Research

The Gulf Coast Research Laboratory (GCRL) has a 50 year history of annual publication of the peer-reviewed journal Gulf and Caribbean Research (GCR, 2000-present; formerly Gulf Research Reports (GRR) from 1961—1999). Other extant journals serving the region during this time include Contributions in Marine Science (since 1945), Proceedings of the Gulf and Caribbean Fisheries Institute (since 1948), Bulletin of Marine Science (since 1951), Revista de Biología Tropical (since 1953), and Caribbean Journal of Science (since 1961). In the early years of the GCR publication, papers were primarily concerned with research in Mississippi and the northern Gulf of Mexico (GOM), and …

Emerging Issues And Methodological Advances In Fisheries Reproductive Biology, Nancy J. Brown-Peterson

Faculty Publications

Although incorporating detailed reproductive data into all stock assessments is not a practical goal, the need to understand how reproductive biology affects population productivity is being increasingly recognized. More research focused on reproductive biology-coupled with a shift towards a resilience perspective in fisheries science-is resulting in challenges to many long-held assumptions; the emergence of important new issues; and identification of the need to improve data and methods used in reproductive studies. Typically, data for reproductive studies are based on an assessment of gonadal development, which is most accurately evaluated with histology. This special section of Marine and Coastal Fisheries contains …

Caribbean Leucothoidae (Crustacea: Amphipoda) Of Panama, Kristine N. White

Gulf and Caribbean Research

Leucothoid amphipods were collected from sponge, ascidian, and bivalve mollusk hosts around Bocas del Toro, Panama. New host and locality records are reported for 10 species. Morphological variation is noted in some species originally described from Belize and South Florida. Future molecular research will help to clarify the importance of this variation. A key to the Caribbean species of the Leucothoidae collected around Bocas del Toro, Panama is provided based on morphological characters.

Distribution And Abundance Of Introduced Fishes In Florida's Charlotte Harbor Estuary, Charles F. Idelberger, Christopher J. Stafford, Sarah E. Erickson

Gulf and Caribbean Research

A growing number of non-native fishes have been introduced into Florida waters in recent years, yet little information has been available on their distribution and abundance in southwest Florida. The ichthyofauna of the Charlotte Harbor estuary, Florida, was intensively sampled from 1989 through 2007. We collected eight introduced fish taxa: African jewelfish (Hemichromis letourneuxi), blue tilapia (Oreochromis aureus), brown hoplo (Hoplosternum littorale), grass carp (Ctenopharyngodon idella), Mayan cichlid (Cichlasoma urophthalmus), sailfin catfishes (Pterygoplichthys spp.), spotted tilapia (Tilapia mariae), and walking catfish (Clarias batrachus). These fishes …

A Comprehensive Uncertainty Analysis And Method Of Geometric Calibration For A Circular Scanning Airborne Lidar, Michael Oliver Gonsalves

Dissertations

This dissertation describes an automated technique for ascertaining the values of the geometric calibration parameters of an airborne lidar. A least squares approach is employed that adjusts the point cloud to a single planar surface which could be either a narrow airport runway or a dynamic sea surface. Going beyond the customary three boresight angles, the proposed adjustment can determine up to eleven calibration parameters to a precision that renders a negligible contribution to the point cloud’s positional uncertainty.

Presently under development is the Coastal Zone Mapping and Imaging Lidar (CZMIL), which, unlike most contemporary systems that use oscillating mirrors …

Geological And Ichthyological Investigations Into Palaeodrainage Hypothesis For The Tennessee River, Andrea Karen Persons

Dissertations

The course of the ancestral Tennessee River has been debated in both the geological and biological literature for over 100 years. Several of the proposed courses for the ancestral Tennessee place its course across the state of Mississippi. Geochemical analysis of sedimentary rocks in the Pascagoula River basin supports these hypotheses suggesting that the rocks in the Pascagoula basin were derived from the Highland Rim of Tennessee and northern Alabama, while geochemical analysis of rocks from the Pearl River basin point to deposition from a mixture of sources including the ancestral Mississippi River and perhaps the ancestral Tennessee. To delve …

Life History And Habitat Use Of The Juvenile Alabama Shad (Alosa Alabamae) In Northern Gulf Of Mexico Rivers, Paul Fraser Mickle

Dissertations

The Alabama shad, Alosa alabamae, is an anadromous species that is in decline and has seen extirpations from impoundments as well as decreased water quality. Alabama shad live in the Gulf of Mexico and ascend Northern Gulf of Mexico Drainages to reproduce early in the year (January-May). The juveniles spend the majority of the year in these freshwater systems before emigrating out to the Gulf of Mexico as late as December.

This dissertation focuses on the juvenile life stages that occur within the Northern Gulf of Mexico drainages. Spawning conditions of the river, as well as the habitat and diet, …

Explaining The Variability Of Free-Living And Attached Bacterioplankton Abundances In The Bay Of St. Louis, Mississippi, Allison K. Mojzis

Master's Theses

The Bay of St. Louis (BSL) is a shallow and vertically well-mixed estuary on the Gulf Coast of Mississippi and supports the recreational and commercial activities of the surrounding towns of Bay St. Louis, Diamondhead, DeLisle, and Pass Christian. In addition to residential communities, various industrial and commercial sites inhabit the watershed and coastline. The Hollywood casino, DuPont titanium dioxide plant, and multiple sew_age treatment plants, as well as nonpoint sources of pollution, contribute to poor water quality. To evaluate spatial and temporal changes in BSL water quality, freeliving and attached bacterioplankton concentrations were enumerated by epifluorescence microscopy. Nine stations …