Marine Biology Commons^™

A Fossil Reef From The Last Interglacial, Western Australia, Benjamin J. Greenstein, John M. Pandolfi, David R. Blakeway

Arts & Sciences Faculty Publications

We report an initial investigation of a Devils Point Event (DPE) style surface exposed approximately 1.5 m above present sea level in a spectacularly preserved reef sequence in southern Exmouth Gulf, Western Australia.

Demonstration Of Toxicity To Fish And To Mammalian Cells By Pfiesteria Species: Comparison Of Assay Methods And Strains, Joann M. Burkholder, Andrew S. Gordon, Peter D. Moeller, J. Mac Law, Kathryn J. Coyne, Alan J. Lewitus, John S. Ramsdell, Harold G. Marshall, Nora J. Deamer, S. Craig Cary, Jason W. Kempton, Steven L. Morton, Parke A. Rublee

Biological Sciences Faculty Publications

Toxicity and its detection in the dinoflagellate fish predators Pfiesteria piscicida and Pfiesteria shumwayae depend on the strain and the use of reliable assays. Two assays, standardized fish bioassays (SFBs) with juvenile fish and fish microassays (FMAs) with larval fish, were compared for their utility to detect toxic Pfiesteria. The comparison included strains with confirmed toxicity, negative controls (noninducible Pfiesteria strains and a related nontoxic cryptoperidiniopsoid dinoflagellate), and P. shumwayae strain CCMP2089, which previously had been reported as nontoxic. SFBs, standardized by using toxic Pfiesteria (coupled with tests confirming Pfiesteria toxin) and conditions conducive to toxicity expression, reliably detected …

Fisheries Occasional Publication No. 6 - Anglers Guide To Assessing Reproductive Stage In Fish, Kim Smith, Mike Mackie, Department Of Fisheries Western Australia

Fisheries Occasional Publications

What is a gonad?

"Gonad" is a general term for a reproductive organ, and is used to describe both ovaries and testes. In male and female fish, the gonad is an elongated organ lying along the upper wall of the gut cavity (i.e. running immediately under the vertebral column). The gonad gonad has 2 lobes. Both lobes are attached to the body near the anus and extend forward inside the gut cavity.

As fish gonads ripen, they become larger, heavier and change colour. Immature and undeveloped adult gonads are very small, strap-like in shape, pinkish in colour and translucent (i.e. …

The Effect Of Loading On Disturbance Sounds Of The Atlantic Croaker Micropogonius Undulatus: Air Versus Water, Michael L. Fine, Justin Schrinel, Timothy M. Cameron

Biology Publications

Physiological work on fish sound production may require exposure of the swimbladder to air, which will change its loading (radiation mass and resistance) and could affect parameters of emitted sounds. This issue was examined in Atlantic croaker Micropogonius chromis by recording sounds from the same individuals in air and water. Although sonograms appear relatively similar in both cases, pulse duration is longer because of decreased damping, and sharpness of tuning (Q factor) is higher in water. However, pulse repetition rate and dominant frequency are unaffected. With appropriate caution it is suggested that sounds recorded in air can provide a useful …

Use Of An Artificial Pond And Marshes By Amphibians And Reptiles In West Virginia, Vanessa A. Dozeman

Theses, Dissertations and Capstones

A farm pond approximately 40 years old located in Wayne County, West Virginia was studied to determine the ingress and egress of amphibians and reptiles. In addition to the pond, 2 small marshes were also examined. The study extended from February 2003 to November 2003. The pond is approximately 36 m long and 38 m wide and is located on a south-facing hillside at 202 m in elevation. A drift fence composed of landscaping cloth was constructed to completely encircle the site. At every 5.15 m, funnel traps were positioned on both sides of the fence. Traps were checked daily …

Summer 2004, Nova Southeastern University

Currents

No abstract provided.

Endocrine-Disrupting Effects Of Cattle Feedlot Effluent On An Aquatic Sentinel Species, The Fathead Minnow, Edward Orlando, Alan Kolok, Gerry Binzcick, Jennifer Gates, Megan Horton, Christy Lambright, L. Earl Gray Jr., Ana M. Soto, Louis J. Guilette

Biology Faculty Publications

Over the last decade, research has examined the endocrine-disrupting action of various environmental pollutants, including hormones, pharmaceuticals, and surfactants, in sewage treatment plant effluent. Responding to the growth of concentrated animal feeding operations (CAFOs) and the pollutants present in their wastewater (e.g., nutrients, pharmaceuticals, and hormones), the U.S. Environmental Protection Agency developed a new rule that tightens the regulation of CAFOs. In this study, we collected wild fathead minnows (Pimephales promelas) exposed to feedlot effluent (FLE) and observed significant alterations in their reproductive biology. Male fish were demasculinized (having lower testicular testosterone synthesis, altered head morphometrics, and smaller …

Factors Controlling Seagrass Revegetation Onto Dredged Material Deposits: A Case Study In Lower Laguna Madre, Texas, James E. Kaldy, Kenneth H. Dunton, Joseph L. Kowalski, Kun-Seop Lee

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Our objective was to evaluate the influence of water quality and sediment chemistry on the survival and growth of Halodule wrightii transplanted onto unconsolidated dredged materials in Lower Laguna Madre, TX. Subsequent to transplanting activities, we measured environmental conditions and seagrass parameters at transplant and natural beds over a 1-yr period. Although water quality characteristics at the transplant and comparison sites were compatible with seagrass growth, transplants failed to survive for more than a few months. Seagrasses at natural sites received high light (>6000 mols m−2 y−1) and exhibited typical patterns of annual growth, biomass and density as well …

The Comparative Energetics And Growth Strategies Of Sympatric Antarctic And Sub Antarctic Fur Seal Pups, At Iles Crozet, J Py Arnould, S P. Luque, C Guinet, D P. Costa, J Kingston, Scott A. Shaffer

Faculty Publications, Biological Sciences

The period of maternal dependence is a time during which mammalian infants must optimise both their growth and the development of behavioural skills in order to successfully meet the demands of independent living. The rate and duration of maternal provisioning, post-weaning food availability and climatic conditions are all factors likely to influence the growth strategies of infants. While numerous studies have documented differences in growth strategies at high taxonomic levels, few have investigated those of closely related species inhabiting similar environments. The present study examined the body composition, metabolism and indices of physiological development in pups of Antarctic fur seals …

Extreme Water Velocities: Topographical Amplification Of Wave-Induced Flow In The Surf Zone Of Rocky Shores, Mark Denny, Luke Miller, M. Stokes, L. J. H. Hunt, B. S. T. Helmuth

Faculty Publications, Biological Sciences

Water velocities as high as 25 m s-1 have been recorded in the surf zone of wave-swept rocky shores-velocities more than twice the phase speed of the breaking waves with which they are associated. How can water travel twice as fast as the waveform that initially induces its velocity? We explore the possibility that the interaction of a wave with the local topography of the shore can greatly amplify the water velocities imposed on intertidal plants and animals. Experiments in a laboratory wave tank show that interactions between bores refracted by a prowlike beach can produce jets in which the …

Acoustic Communication In Two Freshwater Gobies: Ambient Noise And Short-Range Propagation In Shallow Streams, Marco Lugli, Michael L. Fine

Biology Publications

Noise is an important theoretical constraint on the evolution of signal form and sensory performance. In order to determine environmental constraints on the communication of two freshwater gobies Padogobius martensii and Gobius nigricans, numerous noise spectra weremeasured from quiet areas and ones adjacent to waterfalls and rapids in two shallow stony streams. Propagation of goby sounds and waterfall noise was also measured. A quiet window around 100 Hz is present in many noise spectra from noisy locations. The window lies between two noise sources, a low-frequency one attributed to turbulence, and a high-frequency one (200–500 Hz) attributed to bubble …

Shallow-Water Reefs In Transition: Examples From Belize And The Bahamas, H. Allen Curran, Benjamin J. Greenstein

Arts & Sciences Faculty Publications

The plight of coral reefs throughout the Caribbean region has been widely reported by reef scientists. A variety of causes has lead to reefal decline, particularly in shallow waters. This study compares the responses of shallow-water reefs in Belize and the Bahamas to outbreaks of white­ band disease (WBD) and traces changes on these reefs to the early 2000s.

Prior to the mid-1980s, reef ridges of the Pelican Cays of Belize were constructed of luxu­ riant stands of Acropora cervicomis. As else­ where, this species suffered massive mortality in mid-1980s owing to WBD, and dead A. cervicor­ nis substrates were …

Workshop On Sustainable Development Of Marine Fish Farming In Wa, Peter Rogers, R Fletcher

Fisheries Management Papers

The purpose of this paper is twofold. First to provide an overview of the role of government and more particularly the Department of Fisheries and second to outline government expectations for aquaculture development agencies in the implementation of sustainable development initiatives and the effect this could have on the management of aquaculture within WA.

Fisheries Occasional Publication No. 2 - Scientific Workshop On The Margaret River Marron, Brett Molony

Fisheries Occasional Publications

Purpose of the Workshop

To gather together and review the scientific evidence around genetic and sustainability issues necessary for the management of Margaret River Marron (MRM)

The outcomes of the day will be to provide scientific advice, options and priorities to the relevant Programs within the Department of Fisheries to promote the sustainability of marron within MR.

* Introduction to, and comparison of, genetic techniques available to researchers. Presenter - Phil Vercoe

* What do we know about the genetic diversity of marron and other Cherax? Presenter - Chris Austin

* Morphology and Hybrids Presenter - Craig Lawrence

* The …

Processes For The Allocation, Reallocation And Governance Of Resource Access In Connection With A Framework For The Future Management Of Fisheries In Western Australia, Government Of Western Australia Department Of Fisheries

Fisheries Management Papers

This paper outlines the issues associated with developing a framework to deal explicitly with the allocation, reallocation and the governance of access to the fisheries resources of Western Australia.

Enrichments And Isolations Of Mesophilic And Thermophilic Iron-Reducing Microbes From Deep-Sea Hydrothermal Vents And The Deep Subsurface, Melissa Mary Kendall

Dissertations and Theses

Microbes inhabiting the deep subsurface play an important role in geochemical processes and may be of practical value in bioremediation and biotechnology. Hydrothermal vents and the deep gold mines of South Africa have be likened to "windows" into the subsurface biosphere. The aim of this research was to isolate and characterize microbes involved in iron-cycling from deep-sea hydrothermal vents and from the deep gold mines of the Witwatersrand Basin. Three mesophilic bacteria, strains BB4, W3, and A6 were isolated from sulfide chimneys at 13°N and a thermophilic bacterium, strain GB21 was isolated from Guaymas Basin on the East Pacific Rise. …

Acoustic Competition In The Gulf Toadfish Opsanus Beta: Acoustic Tagging, Robert F. Thorson, Michael L. Fine

Biology Publications

Nesting male gulf toadfish Opsanus beta produce a boatwhistle advertisement call used in male–male competition and to attract females and an agonistic grunt call. The grunt is a short-duration pulsatile call, and the boatwhistle is a complex call typically consisting of zero to three introductory grunts, a long tonal boop note, and zero to three shorter boops. The beginning of the boop note is also gruntlike. Anomalous boatwhistles contain a short-duration grunt embedded in the tonal portion of the boop or between an introductory grunt and the boop. Embedded grunts have sound-pressure levels and frequency spectra that correspond with those …

Heart Rate And Energy Expenditure Of Incubating Wandering Albatrosses: Basal Levels, Natural Variation, And The Effects Of Human Disturbance, H Weimerskirch, Scott A. Shaffer, G Mabille, J Martin, O Boutard, J-L Rouanet

Faculty Publications, Biological Sciences

We studied the changes in heart rate (HR) associated with metabolic rate of incubating and resting adult wandering albatrosses (Diomedea exulans) on the Crozet Islands. Metabolic rates of resting albatrosses fitted with external HR recorders were measured in a metabolic chamber to calibrate the relationship between HR and oxygen consumption (V̇O2) (V̇O2=0.074×HR+0.019, r2=0.567, P<0.001, where V̇O2 is in ml kg–1 min–1 and HR is in beats min–1). Incubating albatrosses were then fitted with HR recorders to estimate energy expenditure of albatrosses within natural field conditions. We also examined the natural variation in HR and the effects of human disturbance on nesting birds by monitoring the changes in HR. Basal HR was positively related to the mass of the individual. The HR of incubating birds corresponded to a metabolic rate that was 1.5-fold (males) and 1.8-fold (females) lower than basal metabolic rate (BMR) measured in this and a previous study. The difference was probably attributable to birds being stressed while they were held in the metabolic chamber or wearing a mask. Thus, previous measurements of metabolic rate under basal conditions or for incubating wandering albatrosses are likely to be overestimates. Combining the relationship between HR and metabolic rate for both sexes, we estimate that wandering albatrosses expend 147 kJ kg–1 day–1 to incubate their eggs. In addition, the cost of incubation was assumed to vary because (i) HR was higher during the day than at night, and (ii) there was an effect of wind chill (<0°C) on basal HR. The presence of humans in the vicinity of the nest or after a band control was shown to increase HR for extended periods (2–3 h), suggesting that energy expenditure was increased as a result of the disturbance. Lastly, males and females reacted differently to handling in terms of HR response: males reacted more strongly than females before handling, whereas females took longer to recover after being handled.

Fisheries Research Report No. 136 - Assessment Of Gonad Staging Systems And Other Methods Used In The Study Of The Reproductive Biology Of Narrow-Barred Spanish Mackerel, Scomberomorus Commerson, In Western Australia, Michael C. Mackie, Paul Lewis

Fisheries Research Reports

Recent research by the Department of Fisheries in Western Australia into the reproductive biology of narrow-barred Spanish mackerel has required the use of various field and laboratory techniques. This report documents the procedures and adaptations of some of these techniques. Assessment and development of illustrated, relevant macroscopic and microscopic staging systems were of particular focus because both have been essential components of the research. The simplified and more reliable macroscopic staging system we developed allowed full use of all gonad samples and a more complete (albeit less distinct) overview of the seasonal pattern of gonad reproductive development. This macroscopic staging …

Range Extensions Of The Seaweeds Codium Taylorii And Caulerpa Prolifera Into The Lower Laguna Madre, Texas, Hudson R. Deyoe, Donald L. Hockaday

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Between January 1999 and April 2000 two chlorophyte algae, Codium taylorii Silva and Caulerpa prolifera F. obovata (Forsskal) Lamouroux were found in the lower Laguna Madre (LLM). Both are coenocytic algae and are members of the chlorophyte class Bryopsidophyceae ( van den Hoek et al. 1995). The species descriptions in Taylor (1960) were used in the identification of the specimens. Her barium specimens have been deposited at the University of Texas- Pan American Coastal Studies Laboratory (accession numbers COlO - C. prolifera, COl 1 - C. taylorii) , University of California at Berkeley (UC 1753606 - C. taylorii) , University …

A Comparison Of Methods To Evaluate Energy Expenditure Of Incubating Wandering Albatrosses, Scott A. Shaffer, D P. Costa, H Weimerskirch

Faculty Publications, Biological Sciences

Measurements of incubation energetics can vary depending on the method used to measure metabolism of an incubating bird. Therefore, we evaluated the energy expenditure of six male and four female wandering albatrosses (Diomedea exulans Linnaeus) using doubly labeled water (DLW), the rate of mass loss, and estimates of metabolic water production derived from water influx rate (WIR). Incubation metabolic rates (IMR) determined with DLW ( 169 ± 21 kJ kg d SD) were significantly lower than estimates derived from mass loss ( 277 ± 46kJ kg d SD) and WIR ( males=289 ± 60 kJ kg d vs. females = …

Nitric Oxide And Cnidarian-Dinoflagellate Symbioses: Pieces Of A Puzzle, Henry G. Trapido-Rosenthal, Katherine H. Sharp

Arts & Sciences Faculty Publications

The presence of nitric oxide synthase (NOS) activity is demonstrated in the tropical marine cnidarian Aiptasia pallida and in its symbiotic dinoflagellate algae, Symbiodinium bermudense. Enzyme activity was assayed by measuring the conversion of arginine to citrulline. Biochemical characterization of NOS from Aiptasia was characterized with respect to cellular localization, substrate and cofactor requirements, inhibitors, and kinetics. In response to acute temperature shock, anemones retracted their tentacles. Animals subjected to such stress had lower NOS activities than did controls. Treatment with NOS inhibitors caused tentacular retraction, while treatment with the NOS substrate L-arginine inhibited this response to stress, as did …

Fisheries Occasional Publication No. 31 - Feeding Lupins To Fish: A Review Of The Nutritional And Biological Value Of Lupins In Aquaculture Feeds, Brett Glencross

Fisheries Occasional Publications

Lupins are the harvested seed of species from the Lupinus genus, a group within the leguminous bean and pea family Fabaceae. Legumes are particularly valuable agricultural crops because of their capacity to provide a grain crop and also fix and return nitrogen to soils and improve the soil value for further cropping. The oilseeds, soybeans and peanuts are also leguminous plants, though traditionally they have been cropped for their oil value, whereas lupins, are cropped for both their protein and nitrogen fixing value (Gladstones, 1998; Perry et al., 1998).

The three key commercial species of lupins are L. angustifolius (Narrow-leafed …

Resilience And Recovery Of Coral Reefs From Large-Scale Disturbances: Contrasting Patterns For San Salvador Island, Bahamas, And Belize, Paulette Peckol, Benjamin J. Greenstein

Arts & Sciences Faculty Publications

Coral cover and diversity are declining while macroalgal abundance is increasing in most Caribbean coral reef systems. Although a complex interaction of natural and anthropogenic disturbances is likely causal, the effects of a specific disturbance may vary dramatically for different reef systems. The coral reefs off the coasts of San Salvador Island, Bahamas and Belize, considered to be in relatively good condition, recently experienced near-direct hits by Hurricanes Floyd (1999) and Mitch (1998), respectively. In addition, NOAA scientists indicated that during 1998, tropical sea surface temperatures (SSTs) reached their highest levels above the normal annual maximum for this past century. …

Taphonomic Evidence For Late Pleistocene Transitions In Coral Reef Community Composition, San Salvador, Bahamas, Thomas A. Rothfus, Benjamin J. Greenstein

Arts & Sciences Faculty Publications

Over the past 20 years, the composi­ tion of Caribbean coral reef communities has changed drastically. The ecology of modern reefs, however, has only been studied since the late 1950's. Thus, only a thirty year data set on changes in coral community composi­ tion exists with which to assess the current faunal transition. The need for longer term data has been recognized by marine ecologists as essential for determining whether the cur­ rent transition is part of a long tenn cycle or itself is an unprecedented phenomenon.

On Telephone Pole Reef, San Salva­ dor, Bahamas, a transition from Acropora cer­ …

A Comparative Study Of The Feeding Ecology Of Chelonia Mydas (Green Turtle) And The Incidental Ingestion Of Prorocentrum Spp, Karen Gayle Holloway Adkins

Retrospective Theses and Dissertations

The diets of green turtles from five dissimilar aggregations of juvenile C. mydas on the East Coast of Florida were analyzed. C. mydas were captured by tangle net from four of the study sites and a dietary sample was collected by an esophageal flushing technique. The gut content of stranded individuals was collected for the fifth site. The vegetation in these study areas differs in varying degrees of abundance and diversity. Analysis of the samples revealed the alga types preferred by green turtles from each population and provided the basis for examination of similarities and differences in their diets.

Large …

Fisheries Research Report No. 121 - Synopsis Of The Biology And Exploitation Of The Blue Swimmer Crab, Portunus Pelagicus Linnaeus, In Western Australia, Mervi I. Kangas

Fisheries Research Reports

This report summarises the existing studies which have provided information on the biology, population characteristics and exploitation of the blue swimmer crab, Portunus pelagicus, in Western Australia. Gaps in the existing knowledge are also highlighted to assist in targeting new research initiatives. Portunus pelagicus matures at about one year and in temperate regions females mate only once a year. This is because mature crabs moult only once a year. It appears from studies to date that Western Australian crabs are one genetic population. This is being further investigated. Migration of the blue swimmer crab occurs between estuaries and the ocean …

Ion Transport Processes Of Crustacean Epithelial Cells, Gregory A. Ahearn, Jeff Duerr, Zhenpeng Zhuang, Richard J. Brown, Amy Aslamkhan, Deirdre A. Killebrew

Faculty Publications - Department of Biological & Molecular Science

Epithelial cells of the gut, antennal glands, integument, and gills of crustaceans regulate the movements of ions into and across these structures and thereby influence the concentrations of ions in the hemolymph. Specific transport proteins serving cations and anions are found on apical and basolateral cell membranes of epithelia in these tissues. In recent years, a considerable research effort has been directed at elucidating their physiological and molecular properties and relating these characteristics to the overall biology of the organisms. Efforts to describe ion transport in crustaceans have focused on the membrane transfer properties of Na1/H1 exchange, calcium uptake as …

A Strategy For The Future Management Of The Joint Authority Northern Shark Fishery. A Discussion Paper., Tim Bray, Jo Kennedy

Fisheries Management Papers

This paper discusses the current status of the Joint Authority Northern Shark Fishery (JANSF), and the major issues affecting it. The main aim of the document is to present a seires of recommendations to enable effective future management of this resource. The paper provides a brief introduction to the JANSF, followed by an examination of the resource base of the fishery (primary species, stock distribution and stock assessment).

Western Rock Lobster Management - Options And Issues, Kevin Donohue

Fisheries Management Papers

Following the Rock Lobster Industry Advisory Committee meeting of the 3 March 1998 the Minister has advised that his position is that there will be no management changes for the 1998/99 season. The purpose of this paper is primarily to provide information explaining management options and issues for consideration of the long term management of the fishery. The paper is divided into three main sections which detail options that have been identified as having the potential to increase the catch value over the next three years. In the first section, an option for enhancing the catch value by transferring lobsters …