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Articles 1111 - 1140 of 1385

Full-Text Articles in Genetics and Genomics

Late Cretaceous Mammals And Magnetostratigraphy, Big Bend, Texas, Julia T. Sankey, Wulf Gose Aug 2001

Late Cretaceous Mammals And Magnetostratigraphy, Big Bend, Texas, Julia T. Sankey, Wulf Gose

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.

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A Cytochrome-B Perspective On Passerina Bunting Relationships, John Klicka, Adam J. Fry, Robert M. Zink, Christopher W. Thompson Jul 2001

A Cytochrome-B Perspective On Passerina Bunting Relationships, John Klicka, Adam J. Fry, Robert M. Zink, Christopher W. Thompson

Ornithology Program (HRC)

We sequenced the complete mitochondrial cytochrome-b gene (1,143 nucleotides) for representatives of each species in the cardinalid genera Passerina (6 species), Guiraca (1 species), and Cyanocompsa (3 species), and used a variety of phylogenetic methods to address relationships within and among genera. We determined that Passerina, as presently recognized, is paraphyletic. Lazuli Bunting (P. amoena) is sister to the much larger Blue Grosbeak (Guiraca caerulea). Indigo Bunting (P. cyanea) and Lazuli Bunting are not sister taxa as generally thought. In all weighted parsimony trees and for the gamma-corrected HKY tree, Indigo Bunting is …

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The Taxonomic Rank Of Spizella Taverneri: A Response To Mayr And Johnson, John Klicka, Robert M. Zink, Jon C. Barlow, W. Bruce Mcgillivray, Terry J. Doyle May 2001

The Taxonomic Rank Of Spizella Taverneri: A Response To Mayr And Johnson, John Klicka, Robert M. Zink, Jon C. Barlow, W. Bruce Mcgillivray, Terry J. Doyle

Ornithology Program (HRC)

Mayr and Johnson suggest that Spizella taverneri should be a subspecies of the biological species S. breweri, because it is possibly not reproductively isolated. We originally concluded that evidence from mitochondrial DNA sequences, habitat preferences, timing of breeding, vocalizations, and morphology supported the recognition of S. taverneri as a phylogenetic and biological species. Nothing in the commentary by Mayr and Johnson causes us to change that conclusion. We believe that it is probable that these two allopatric taxa are isolated. Contrary to Mayr and Johnson, we believe that more information is given by ranking S. taverneri as a species, because …

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Origin And Conservation Genetics Of Threatened Ute Ladies’-Tresses, Spiranthes Diluvialis (Orchidaceae), Allen L. Szalanski, Gerry Steinauer, Richard Bischof, Jessica Lynn Petersen Jan 2001

Origin And Conservation Genetics Of Threatened Ute Ladies’-Tresses, Spiranthes Diluvialis (Orchidaceae), Allen L. Szalanski, Gerry Steinauer, Richard Bischof, Jessica Lynn Petersen

Department of Animal Science: Faculty Publications

The Ute ladies’-tresses, Spiranthes diluvialis, is listed as a threatened orchid in west-central United States by the Federal government. Information on its origin and patterns of genetic variation is needed to develop effective conservation strategies for this species. DNA sequencing and polymerase chain reaction–restriction fragment length polymorphism (PCR-RFLP) was used to evaluate genetic variation and structure of 23 populations of S. diluvialis. In addition, four congeneric species were analyzed to determine possible origins of the putative allotetraploid S. diluvialis. DNA sequencing and PCR-RFLP analysis of the nuclear ribosomal internal transcribed spacer (ITS) and mitochondrial and chloroplast DNA …

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The Effect Of Aspen Wood Characteristics And Properties On Utilization, Kurt H. Mackes, Dennis L. Lynch Jan 2001

The Effect Of Aspen Wood Characteristics And Properties On Utilization, Kurt H. Mackes, Dennis L. Lynch

Aspen Bibliography

This paper reviews characteristics and properties of aspen wood, including anatomical structure and characteristics, moisture and shrinkage properties, weight and specific gravity, mechanical properties, and processing characteristics. Uses of aspen are evaluated: sawn and veneer products, composite panels, pulp, excelsior, post and poles, animal bedding, animal food supplements, fuel applications, and novelties. Aspen is a preferred species for paneling, veneer products including matchsticks and chopsticks, waferboard and oriented strandboard (OSB), fiberboard, pulp, excelsior, research animal bedding, animal food supplements, and tourist or gift items.

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Recolonization Of The Flicker And Other Notes From Isla Guadalupe, Mexico, Paul R. Sweet, George F. Barrrowclough, John Klicka, Liliana Montanez-Godoy, Patricia Escalante Jan 2001

Recolonization Of The Flicker And Other Notes From Isla Guadalupe, Mexico, Paul R. Sweet, George F. Barrrowclough, John Klicka, Liliana Montanez-Godoy, Patricia Escalante

Ornithology Program (HRC)

During a visit to Isla Guadalupe from 31 May to 3 June 1996, we documented three species new to the island, the Barn Owl, Swainson's Thrush, and Hooded Oriole, and established first breeding records for the European Starling and Western Meadowlark. Red-shafted Flickers are now breeding on the island, representing a recent recolonization from the mainland following the extinction of the endemic population. We investigated the validity of Colaptes auratus rufipileus and concluded that it doesn’t meet the standard for phylogenetic species but differs from C. a. collaris at the 75% level usually associated with subspecific rank. Damage to the …

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A New Species Of Garter Snake From Western Mexico, Roger Conant May 2000

A New Species Of Garter Snake From Western Mexico, Roger Conant

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.

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New World Nine-Primaried Oscine Relationships: Constructing A Molecular Framework, John Klicka, Kevin P. Johnson, Scott M. Lanyon Apr 2000

New World Nine-Primaried Oscine Relationships: Constructing A Molecular Framework, John Klicka, Kevin P. Johnson, Scott M. Lanyon

Ornithology Program (HRC)

Historically, a paucity of comparative morphological characters has led to much debate regarding relationships within and among the major lineages of New World nine-primaried oscines. More recently, DNA-DNA hybridization studies have provided novel and testable hypotheses of relationships, although no consensus has been reached. For 40 songbird taxa, we obtained 1,929 base pairs (bp) of DNA sequence from the mitochondrial cytochrome-b (894 bp) and NADH dehydrogenase subunit 2 (1,035 bp) genes. Phylogenetic analyses confirm the monophyly of this assemblage as traditionally defined. The lineages delineated historically on morphological grounds are retained; finches (Fringillinae) are sister to a well-supported clade …

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Evolutionary Patterns Of Morphometrics, Allozymes And Mitochondrial Dna In Thrashers (Genus Toxostoma), Robert M. Zink, Donna L. Dittmann, John Klicka, Rachelle C. Blackwell-Rago Oct 1999

Evolutionary Patterns Of Morphometrics, Allozymes And Mitochondrial Dna In Thrashers (Genus Toxostoma), Robert M. Zink, Donna L. Dittmann, John Klicka, Rachelle C. Blackwell-Rago

Ornithology Program (HRC)

We examined patterns of variation in skeletal morphometrics (29 characters), allozymes (34 loci), mitochondrial DNA (mtDNA) restriction sites (n = 74) and fragments (n = 395), and mtDNA sequences (1,739 bp from cytochrome b, ND2, ND6, and the control region) among all species of Toxostoma. The phenetic pattern of variation in skeletal morphometrics generally matched traditional taxonomic groupings (based on plumage patterns) with the exceptions of T. redivivum, which because of its large size clusters outside of its proper evolutionary group (lecontei), and T. occelatum, which did not cluster with T. curvirostre. Skull characters contributed highly to species discrimination, suggesting …

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Evidence Supporting The Recent Origin And Species Status Of The Timberline Sparrow, John Klicka, Robert M. Zink, Jon C. Barlow, W. Bruce Mcgillivray, Terry J. Doyle Aug 1999

Evidence Supporting The Recent Origin And Species Status Of The Timberline Sparrow, John Klicka, Robert M. Zink, Jon C. Barlow, W. Bruce Mcgillivray, Terry J. Doyle

Ornithology Program (HRC)

The Timberline Sparrow (Spizella taverneri), although originally described as a species, is currently classified as a subspecies of the more widespread Brewer's Sparrow (S. breweri). We investigated the taxonomic status and recent evolutionary history of these species by comparison of both morphological and molecular characters. Morphometric comparisons using 6 external and 18 skeletal measurements show that S. taverneri specimens from two widely separated populations (Yukon and southwestern Alberta, Canada) are indistinguishable with respect to size yet are significantly larger (by 3%) than representatives of several breweri populations. Analysis of 1,413 base pairs of mitochondrial DNA (mtDNA) for 10 breweri and …

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The Translocation Of Barramundi. A Discussion Paper., Makaira Pty Ltd Jul 1999

The Translocation Of Barramundi. A Discussion Paper., Makaira Pty Ltd

Fisheries Management Papers

There is recognisable economic benefit to the translocation of barramundi, but there is also a need to ensure the translocation will not adversely impact upon the genetic diversity, introduce disease or impact on the natural environment and biodiversity. This discussion paper has been prepared to provide information to assist in the assessment of the possible impact of translocation of barramundi into and within Western Australia, for the purposed of recreational stock enhancement, aquaculture development and domestic stocking. In contemplating the translocation any aquatic species, signigicant economic and social benefits must be balanced with biological and environmental risks; that is, the …

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Plant Hybrid Zones And Insect Host Range Expansion, Diana Pilson Jan 1999

Plant Hybrid Zones And Insect Host Range Expansion, Diana Pilson

Diana Pilson Publications

The hybrid bridge hypothesis suggests that plant hybrids ‘‘bridge’’ the genetic gap between actual and potential host species, and that, for this reason, herbivorous insects are more likely to evolve an expanded host range in the presence of hybrids. While intuitively appealing, the hypothesis has two implicit assumptions: that phenotypic gaps between potential hosts limit host range, and that characters controlling host use are additively inherited in plant hybrids. Evaluation of these assumptions suggests that operation of the hybrid bridge hypothesis is relatively uncommon. In addition, the hypothesis has not been well integrated into existing theoretical and empirical work on …

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An Investigation Of Crystalline Intensity Of The Wood Of Poplar Clones Grown In Jiangsu Province, China, Bernard R. Parresol, Fuliang Cao May 1998

An Investigation Of Crystalline Intensity Of The Wood Of Poplar Clones Grown In Jiangsu Province, China, Bernard R. Parresol, Fuliang Cao

Aspen Bibliography

No abstract provided.

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The Evolution Of Primate Malaria Parasites Based On The Gene Encoding Cytochrome B From The Linear Mitochondrial Genome, Ananias A. Escalante, Denise E. Freeland, William E. Collins, Altaf A. Lal Jan 1998

The Evolution Of Primate Malaria Parasites Based On The Gene Encoding Cytochrome B From The Linear Mitochondrial Genome, Ananias A. Escalante, Denise E. Freeland, William E. Collins, Altaf A. Lal

Harold W. Manter Laboratory of Parasitology: Library Materials

We report a phylogenetic analysis of primate malaria parasites based on the gene encoding the cytochrome b protein from the mitochondrial genome. We have studied 17 species of Plasmodium, including 14 parasitic in primates. In our analysis, four species were used for rooting the Plasmodium phylogenetic tree: two from closely related genera (Hepatocystis sp. and Haemoproteus columbae) and two other Apicomplexa (Toxoplasma gondii and Theileria parva). We found that primate malaria parasites form a monophyletic group, with the only exception being the Plasmodium falciparum–Plasmodium reichenowi lineage. Phylogenetic analyses that include two species …

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The Use Of Isoelectric Focusing To Assess The Genetic Diversity Of The Cyprinid Fishes: Rhinichthys Cataractae And Rhinichthys Atratulus In West Virginia, Fauzia Alam Miah Jan 1998

The Use Of Isoelectric Focusing To Assess The Genetic Diversity Of The Cyprinid Fishes: Rhinichthys Cataractae And Rhinichthys Atratulus In West Virginia, Fauzia Alam Miah

Theses, Dissertations and Capstones

In this study, isoelectric focusing is used to separate proteins of Rhinichthys cataractae and R. atratulus and conventional staining is used to identify alleles of six genes. The objective of this work is to determine whether these methods can effectively assay isozymes that may be used to establish the relationship between anthropogenic stress and genetic diversity. Alleles for LDH-A, LDH-B, EST-A, EST-B, EST-C, and EST-D loci were identified for two species of fish, R. atratulus and R. cataractae. Both fish species are known to be sensitive to anthropogenic stress and known to be widely distributed in stressed environments. Alleles …

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Draft: Plan For The Management Of The Houtman Abrolhos Islands Fish Habitat Protection Area (Schedule 1), Abrolhos Islands Management Advisory Council, Fisheries Department Of Western Australia Dec 1997

Draft: Plan For The Management Of The Houtman Abrolhos Islands Fish Habitat Protection Area (Schedule 1), Abrolhos Islands Management Advisory Council, Fisheries Department Of Western Australia

Fisheries Management Papers

This document is a separate draft plan which has been prepared to meet the requirements of Section 117 of the Fish Resources Management Act 1994. It contains a description of the area; outlines the purposes for which the area is to be set aside; and lists the recommendations contained in Fisheries Management Paper No. 104, Management of the Houtman Abrolhos System, which relate to the management of the proposed Fish Habitat Protection Area.

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Management Of The Houtman Abrolhos System, Abrolhos Islands Management Advisory Council, Fisheries Department Of Western Australia Dec 1997

Management Of The Houtman Abrolhos System, Abrolhos Islands Management Advisory Council, Fisheries Department Of Western Australia

Fisheries Management Papers

In November 1995 Cabinet resolved that the Minister for Fisheries would establish the Abrolhos Islands Management Advisory Committee (AIMAC) pursuant to Section 42 of the Fish Resources Management Act 1994. The role of AIMAC is to advise the Minister for Fisheries about the management of the Abrolhos Islands and the adjoining State Territorial Waters, as detailed in Section 2.2.3.1 of this report. The AIMAC has overseen the preparation of this report on behalf of the Minister for Fisheries. This draft report contains a brief description of the Abrolhos System and its special values. It also states goals and objectives for …

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Abalone Aquaculture In Western Australia. Discussion Paper And Draft Policy Guidelines., Cameron Westaway, Jeff Norriss Oct 1997

Abalone Aquaculture In Western Australia. Discussion Paper And Draft Policy Guidelines., Cameron Westaway, Jeff Norriss

Fisheries Management Papers

The purposes of this discussion paper is to highlight relevant issues associated with abalone aquaculture development and outline a set of draft policy guidelines. The paper is being disseminated to members of the aquaculture industry, commercial and recreational fishing bodies and the broader community to allow comment.

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Draft: Optimising The Worth Of The Lobster Catch: Options And Issues, Marec Pty Ltd Sep 1997

Draft: Optimising The Worth Of The Lobster Catch: Options And Issues, Marec Pty Ltd

Fisheries Management Papers

The purpose of this document is to contribute to informed discussion on alternative measures which might be adopted to optimise the worth of the lobster catch. In doing so, it provides a number of possible initiatives which could be more closely examined for adoption. Details of issues are provided which should be taken into consideration when assessing the various proposals. The industry as it is today is examined and assessed, and its achievements analysed. The possible initiatives proposed stem from this research. As a consequence of this document, the rock lobster industry could undertake to proceed with a detailed examination …

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Marine Farm Planning And Consultation Processes In Western Australia, Dave Everall Aug 1997

Marine Farm Planning And Consultation Processes In Western Australia, Dave Everall

Fisheries Management Papers

The development of a sustainable aquaculture industry in Western Australia is considered to be a high priority by the Government. The marine farming industry has a bright future in Western Australia, but there is a need to balance its developing needs for suitable waters with those of existing activities, and with community expectations for accountability and transparency in the resolution of equity and resource sharing decisions. The purpose of this report is to review the existing planning and consultation processes for pearling and aquaculture in WA and recommend how they may be improved and incorporated into a single process. It …

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A. F. J. K. Mayer: Anatomy Of The Eye Of The Cetaceans. An Annotated Translation., Heiko L. Shoenfuss Jul 1997

A. F. J. K. Mayer: Anatomy Of The Eye Of The Cetaceans. An Annotated Translation., Heiko L. Shoenfuss

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.

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Variation In The Mexican Garter Snake Thamnophis Scalaris Cope And The Taxonomic Status Of T. Scaliger (Jan), Douglas A. Rossman, Guillermo Lara Gongora Jul 1997

Variation In The Mexican Garter Snake Thamnophis Scalaris Cope And The Taxonomic Status Of T. Scaliger (Jan), Douglas A. Rossman, Guillermo Lara Gongora

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.

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Percina Kathae, A New Logperch Endemic To The Mobile Basin In Mississippi, Alabama, Georgia, And Tennessee (Percidae, Etheostomatini), Bruce A. Thompson Jul 1997

Percina Kathae, A New Logperch Endemic To The Mobile Basin In Mississippi, Alabama, Georgia, And Tennessee (Percidae, Etheostomatini), Bruce A. Thompson

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.

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The Aquaculture Of Non-Endemic Species In Western Australia, Tina Thorne Jun 1997

The Aquaculture Of Non-Endemic Species In Western Australia, Tina Thorne

Fisheries Management Papers

This Management Paper has been drafted in liaison with the Department of Environmental Protection in accordance with the principles of risk assessment and taking into account translocation issues of non-endemic species such as redclaw (Cheras quadricarninatus). It is considered that the implementation of this policy will protect the natural environment and native crayfish species. It will also allow for the development of a redclaw industry, and provide the first step towards self regulation of that industry.

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Management Arrangements For The Western Rock Lobster Fishery For The 1997/98 Season, F. B. Prokop May 1997

Management Arrangements For The Western Rock Lobster Fishery For The 1997/98 Season, F. B. Prokop

Fisheries Management Papers

This paper deals with the proposed management strategies for the 1997/98 seasons. The purpose of this paper is to present the views of RLIAC on management arrangements for the 1997/98 rock lobster season and to indicate the strategic directions that long term management of this important fishery might take so as to ensure both its biological sustainability and the optimisation of product value for both the State and the participants in the fishery.

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Percina Suttkusi, A New Species Of Logperch (Subgenus Percina) From Louisiana, Mississippi, And Alabama (Perciformes, Percidae, Etheostomatini), Bruce A. Thompson Apr 1997

Percina Suttkusi, A New Species Of Logperch (Subgenus Percina) From Louisiana, Mississippi, And Alabama (Perciformes, Percidae, Etheostomatini), Bruce A. Thompson

Occasional Papers of the Museum of Natural Science, Louisiana State University

No abstract provided.

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Management Of The South Coast Purse Seine Fishery, J Fowler, K Donohue, R.C. J. Lenanton, M. Moran, D Gaughan Mar 1997

Management Of The South Coast Purse Seine Fishery, J Fowler, K Donohue, R.C. J. Lenanton, M. Moran, D Gaughan

Fisheries Management Papers

This paper has presented a strategy for moving the management of the small pelagics fishery off the south coast to management of the whole fishery, which facilitates a more biologically sound and economically stable fishery.

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A Pricing Policy For Fisheries Agencies, Management Committee Of Scfa, Standing Committee Of Fisheries And Aquaculture (Sfca), Department Of Primary Industries And Energy Mar 1997

A Pricing Policy For Fisheries Agencies, Management Committee Of Scfa, Standing Committee Of Fisheries And Aquaculture (Sfca), Department Of Primary Industries And Energy

Fisheries Management Papers

The intent of this paper is to inform members of Standing Committee for Fisheries and Aquaculture (SCFA) and the members of the Ministerial Council for Fisheries, Forestry and Aquaculture of the methods of fee setting that are currently applied by fisheries agencies in Australia, and alternative pricing policies for fisheries agencies.

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Parade Of Presidents, John L. Artz Jan 1997

Parade Of Presidents, John L. Artz

Aspen Bibliography

No abstract provided.

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Shark Bay World Heritage Property: Summary Of Public Submissions To The Draft Management Plan For Fish Resources, Kevin A. Francesconi Oct 1996

Shark Bay World Heritage Property: Summary Of Public Submissions To The Draft Management Plan For Fish Resources, Kevin A. Francesconi

Fisheries Management Papers

In November 1994, the draft management plan for fish resources for the Shark Bay World Heritage Area (Fisheries Management Paper no 72) was released for public comment. This report summarises and analyses the 28 written public submissions received to the draft fisheries management plan.

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