Terrestrial and Aquatic Ecology Commons^™

Scalability And Performance Tradeoffs In Quantifying Relationships Between Elevation And Tidal Wetland Plant Communities, James R. Holmquist, Lisa Schile-Beers, Kevin Buffington, Meng Lu, Thomas J. Mozdzer, Jefferson Riera, Donald E. Weller, Meghan Williams, J Patrick Megonigal

Biology Faculty Research and Scholarship

Elevation is a major driver of plant ecology and sediment dynamics in tidal wetlands, so accurate and precise spatial data are essential for assessing wetland vulnerability to sea-level rise and making forecasts. We performed survey-grade elevation and vegetation surveys of the Global Change Research Wetland, a brackish microtidal wetland in the Chesapeake Bay estuary, Maryland (USA), to both intercompare unbiased digital elevation model (DEM) creation techniques and to describe niche partitioning of several common tidal wetland plant species. We identified a tradeoff between scalability and performance in creating unbiased DEMs, with more data-intensive methods such as kriging performing better than …

Analysis Of Methods To Measure Heart Rate In Mytilus Edulis, Kristin Pinho

Student Research Poster Presentations 2021

Non-invasive research will be performed to limit the additional stress from equipment and focus on the harmful effects that polluted run-off water has on mussels’ heart rates. The chemical that will be introduced to the laboratory environment will be weed killer. This research will simulate how water pollution affects different aquatic species and how that ultimately leads to environmental changes, while evaluating the most effective methods to conduct this research.

Identification And Functional Analysis Of Thadh1 And Thadh4 Genes Involved In Tolerance To Waterlogging Stress In Taxodium Hybrid ‘Zhongshanshan 406’, Lei Xuan, Jianfeng Hua, Fan Zhang, Zhiquan Wang, Xiaoxiao Pei, Ying Yang, Yunlong Yin, David Creech

Faculty Publications

The Taxodium hybrid ‘Zhongshanshan 406’ (T. hybrid ‘Zhongshanshan 406’) [Taxodium mucronatum Tenore × Taxodium distichum (L.). Rich] has an outstanding advantage in flooding tolerance and thus has been widely used in wetland afforestation in China. Alcohol dehydrogenase genes (ADHs) played key roles in ethanol metabolism to maintain energy supply for plants in low-oxygen conditions. Two ADH genes were isolated and characterized—ThADH1 and ThADH4 (GenBank ID: AWL83216 and AWL83217—basing on the transcriptome data of T. hybrid ‘Zhongshanshan 406’ grown under waterlogging stress. Then the functions of these two genes were investigated through transient expression and overexpression. The results showed that the …

Precise Multispecies Agricultural Gas Flux Determined Using Broadband Open-Path Dual-Comb Spectroscopy, D. I. Herman, C. Weerasekara Et Al.

School of Natural Resources: Documents and Reviews

No abstract provided.

Green Team – Ecological Restoration Of Plaster Creek, Jia Luchs, Caleb Mathai, Rachel Warners, David Warners, Deanna Geelhoed

Summer Research

Plaster Creek, though its watershed is home to many potential stewards in Grand Rapids, is the most polluted creek in West Michigan. The Green Team, a branch of Plaster Creek Stewards, is a group of students that work during the summer with a focus on research, education, and working directly to restore Plaster Creek. The team works toward this goal through urban green infrastructure, utilizing native plants to manage stormwater. Two Calvin students, Caleb Mathai and Jia Luchs, one high school intern, Ben Zwart, and twelve high school students living in the Plaster Creek watershed were hired by PCS this …

Stormwater Capture Via Green Infrastructure In The Plaster Creek Watershed, Brett Barents, Kiara Bromley, Haley Weesies, Deanna Geelhoed, David Warners

Summer Research

Calvin University’s campus is located within the Plaster Creek watershed, an area of land that extends from Caledonia to the Grand River near downtown Grand Rapids. All of the water within this region drains into Plaster Creek, which, after many years of neglect and mistreatment, has become one of the most polluted waterways in West Michigan. Plaster Creek Stewards (PCS) aims to restore the local watershed by means of education, research and “on the ground” restoration. The focus of their restoration work is to reduce stormwater runoff containing high amounts of sediment, chemicals, and other pollutants. A variety of green …

Comparing The Condition Of Deformed And Non-Deformed Walleyes In Long Lake, Mn, Clayton Beck

Journal of Earth and Life Science

Walleye Sander vitreus is a popular game fish in Minnesota. Walleye’s have become such a popular game fish for anglers that it has led agencies to raise Walleye in rearing ponds. Farm raised fish can show deformities due to environmental, genetic, nutritional, infectious, and toxic factors. Due to this phenomenon, the purpose of this study was to determine if the condition of the Walleye differed between those with and without deformities in Long Lake, MN. Angling was the method of capture during the months of September 2020 through July 2021. There was no evidence to suggest condition differed between non-deformed …

Investigation Of Fluorescence In Selected Mammals Of Arkansas, C. Renn Tumlison, Terry L. Tumlison

Journal of the Arkansas Academy of Science

The adaptive value of fluorescence among the vertebrates has been studied most in fishes and birds, and only a few observations have been published regarding fluorescence in the pelage of mammals. Recently, reports of fluorescence in some marsupials, the platypus, and in flying squirrels have become available. We report the occurrence of fluorescent properties in some mammals from Arkansas. Most carnivores, bats, and rodents did not exhibit the property when viewed under UV light. However, opossums, rabbits, a weasel, muskrats, and moles showed substantial UV response, and a few other mammals showed minor fluorescence. Colors fluoresced included pink, green, and …

Distribution And History Of The Roseate Spoonbill (Platalea Ajaja) In Arkansas, C. Renn Tumlison, Grace Wills, Karen Rowe

Journal of the Arkansas Academy of Science

The Roseatte Spoonbill (Platalea ajaja) is a rare bird in Arkansas and was not reported from the state until 1959, when it was seen in southwestern Arkansas. By use of online sources for citizen science, we elucidate the history of occurrence and present analysis of seasonal distribution of this bird in Arkansas. Individuals arrive in Arkansas as early as April, observations peak in August, and the birds may remain to late October when colder weather promotes southward migration. Most observations are of a few birds, but a maximum of 128 has been counted at one location and time. …

Prevalence Of Cymothoidae (Isopoda) Infestation In Bigeye Scad (Selar Crumenophtalmus) From Batangas, Philippines, Tanya Faye S. Muji, Joaquin R. Sorreta, Janice A. Ragaza

Biology Faculty Publications

Cymothoid isopod research is relatively scarce in the Philippines, despite the local economic significance of bigeye scad as an inexpensive source of protein and other nutrients. Isopod parasitism has also been shown to have detrimental effects on their fish hosts. The current study aimed to define the host-parasite relationship between cymothoid isopod and bigeye scad by determining cymothoid isopod prevalence, intensity, and host-parasite length correlations in bigeye scad (Selar crumenophthalmus) hosts sourced from Batangas, Philippines. Fish samples were sampled from the Tagaytay City Market in Cavite, which sources fish directly from Batangas. Fish samples were immediately measured and …

Stress Response Of Largemouth And Smallmouth Bass: Barbless Hooks Versus Barbed Hooks C & R, Wesley Steinmetz, Carson Tembrock

Journal of Earth and Life Science

Largemouth Bass Micropterus salmoides and Smallmouth Bass Micropterus dolomieu are two of the most popular species of fish for anglers to target in Minnesota. In this study, Largemouth Bass and Smallmouth Bass stress was characterized by handling time and recovery time. This study compares handling time and recovery time between barbed and barbless hooks. For Largemouth Bass, there was a significant relationship between recovery time and time out of the water for barbed (P = 0.02, R² = 0.86) and barbless hooks (P < 0.01, R² = 0.74). For Smallmouth Bass, there was no significant relationship between recovery time and time …

Understanding Metrics Of Stress In The Context Of Invasion History: The Case Of The Brown Treesnake (Boiga Irregularis), Natalie Claunch, Ignacio Moore, Heather L. Waye, Laura Schoenle, Samantha J. Oakey, Robert N. Reed, Christina Romagosa

Biology Publications

Invasive species can exert rapid depletion of resources after introduction and, in turn, affect their own population density. Additionally, management actions can have direct and indirect effects on demography. Physiological variables can predict demographic change but are often restricted to snapshots-in-time and delayed confirmation of changes in population density reduces their utility. To evaluate the relationships between physiology and demography, we assessed metrics of individual and demographic stress (baseline and 1-h corticosterone (CORT), body condition and bacterial killing ability) in the invasive snake Boiga irregularis on Guam collected in intervals of 10–15 years. We also assessed potential discrepancies between different …

Effects Of Salt Runoff On Aquatic Macroinvertebrate Colonies, Kendra Fink

Journal of Earth and Life Science

Aquatic macroinvertebrates bridge the gap in part between primary and secondary consumers, making them ecologically important for most aquatic systems. They are used as biotic indicators for water quality due to their sensitivity to pollutants and may be affected, specifically, by chloride ion concentrations in the water. Water quality can be evaluated by looking at species compositions and their respective tolerance values. To determine long-term effects of road salt on macroinvertebrate colonies, a total of 338 identified macroinvertebrates of 10 families (two generalized to class) at 9 sites were collected from before, after, and between three bridges on Turtle River …

Strategies For Successful Mangrove Living Shoreline Stabilizations In Shallow Water Subtropical Estuaries, Rebecca Fillyaw

Electronic Theses and Dissertations, 2020-2023

Mangrove living shorelines are an effective alternative to hard-armoring, which combat erosion while also increasing habitat. To improve the success of future mangrove deployments, an experimental Rhizophora mangle living shoreline was deployed within Mosquito Lagoon, FL. A factorial design was used to test the impact of mangrove age, breakwater presence, and mangrove placement on mangrove survival and growth. Environmental factors were monitored to isolate the reason for mangrove mortalities. Mangrove age was represented by 3 developmental stages: "seedlings" at 11-months-old, "transitionals" at 23-months-old, and "adults" between 35 and 47-months-old. Mixed mangrove age groups were included to identify if seedling survival …

Pheasant Ecology In An Agricultural Landscape Of South Dakota, Sprih Harsh

Electronic Theses and Dissertations

Habitat loss and fragmentation are the greatest threats to wildlife conservation. Grasslands are among the most threatened ecosystems worldwide. The large-scale conversion of North American grasslands to cultivation has been strongly associated with declines of grassland bird populations. The ring-necked pheasant (Phasianus colchicus) is a common grassland bird which is negatively impacted by the conversion of grassland to cropland. Though pheasants are non-native to South Dakota, they have become naturalized in most of the state. However, with increases in agricultural intensification in South Dakota, indices of pheasant abundance from brood route surveys suggest that pheasant populations have declined to historically …

Monitoring Landscape And Spectral Dynamics Of Subtropical Freshwater Wetlands That Have Undergone Hydrological Restoration, Sarah Parker

Electronic Theses and Dissertations, 2020-2023

Over the last century, millions of hectares of wetlands have been lost due to urban development and agricultural activities throughout the world. In the U.S., efforts have been made by federal and state legislation to restore wetland habitat in exchange for development on wetlands. To restore ecosystem function by reestablishing hydrological metrics (e.g., groundwater level fluctuations), wetland restoration aims to facilitate the growth of wetland vegetation to approximate the original conditions as a proxy for ecological integrity. In 1992, the first landscape-scale off-site mitigation project, the Disney Wilderness Preserve (DWP) was funded by the Walt Disney Company in Poinciana, Florida. …

Correlations In Microplastic Abundance Between Water, The Eastern Oyster, Crassostrea Virginica, And Their Biodeposits In A Dynamic Florida Estuary, Casey Craig

Electronic Theses and Dissertations, 2020-2023

Estuaries have been identified as hotspots of microplastic pollution because they are transitional zones where coastal freshwater and oceans converge. Microplastics (MP) are transported through estuaries by a dynamic series of forces such as surface flow and tides, which influence MP abundances and trends. The eastern oyster, Crassostrea virginica, is an estuarine bivalve known to ingest MP, resulting in negative impacts on organism physiology. I investigated MP pollution as a threat to C. virginica in a dynamic Florida estuary, the Indian River Lagoon (IRL), and determined there are both regional and small-scale spatial and temporal fluctuations in MP abundance. Tributaries …

Contrasting Patterns Of Nutrient Limitation In The Littoral And Pelagic Zones Of Mesotrophic Maine Lakes, Grace C. Neumiller

Honors Theses

Intense nutrient loading of nitrogen (N) and phosphorus (P) causes sudden regime shifts in freshwater ecosystems from clearwater to turbid conditions with frequent cyanobacterial blooms. Characterization of nutrient limitation patterns of primary productivity in these ecosystems is necessary for effective management of algal blooms. However, much of this research has focused on pelagic habitats. The influence of lake habitat (i.e. benthic littoral versus pelagic zones) on nutrient limitation of primary production in mesotrophic lakes is largely unknown, particularly in contrast to research on pelagic nutrient limitation in eutrophic systems. Using paired nutrient diffusing substrata and mesocosm experiments, we measured chlorophyll- …

What Lies Beneath: Predicting Seagrass Below-Ground Biomass From Above-Ground Biomass, Environmental Conditions And Seagrass Community Composition, C. J. Collier, L. M. Langlois, Kathryn M. Mcmahon, J. Udy, M. Rasheed, E. Lawrence, A. B. Carter, M. W. Fraser, L. J. Mckenzie

Research outputs 2014 to 2021

© 2020 Seagrass condition, resilience and ecosystem services are affected by the below-ground tissues (BGr) but these are rarely monitored. In this study we compiled historical data across northern Australia to investigate biomass allocation strategies in 13 tropical seagrass species. There was sufficient data to undertake statistical analysis for five species: Cymodocea serrulata, Halophila ovalis, Halodule uninervis, Thalassia hemprichii, and Zostera muelleri. The response of below-ground biomass (BGr) to above-ground biomass (AGr) and other environmental and seagrass community composition predictor variables were assessed using Generalized Linear Models. Environmental data included: region, season, sediment type, water depth, proximity to land-based sources …

Population-Specific Resilience Of Halophila Ovalis Seagrass Habitat To Unseasonal Rainfall, An Extreme Climate Event In Estuaries, Chanelle L. Webster, Kieryn L. Kilminster, Marta Sánchez Alarcón, Katherine Bennett, Simone Strydom, Sian Mcnamara, Paul S. Lavery, Kathryn M. Mcmahon

Research outputs 2014 to 2021

1. Extreme climate events are predicted to alter estuarine salinity gradients exposing habitat-forming species to more frequent salinity variations. The intensity and duration of these variations, rather than the mean salinity values ecosystems are exposed to, may be more important in influencing resilience but requires further investigation.
2. Precipitation, including the frequency, intensity and timing of occurrence, is shifting due to climate change. A global analysis on the timing of rainfall in estuarine catchments was conducted. In 80% of the case studies, the maximum daily rainfall occurred in the dry season at least once over the 40-year period and could be classified …

Quantifying 210po/210pb Disequilibrium In Seawater: A Comparison Of Two Precipitation Methods With Differing Results, Montserrat Roca-Martí, Viena Puigcorbé, Maxi Castrillejo, Núria Casacuberta, Jordi Garcia-Orellana, J. Kirk Cochran, Pere Masqué

Research outputs 2014 to 2021

The disequilibrium between lead-210 (210Pb) and polonium-210 (210Po) is increasingly used in oceanography to quantify particulate organic carbon (POC) export from the upper ocean. This proxy is based on the deficits of 210Po typically observed in the upper water column due to the preferential removal of 210Po relative to 210Pb by sinking particles. Yet, a number of studies have reported unexpected large 210Po deficits in the deep ocean indicating scavenging of 210Po despite its radioactive mean life of ∼ 200 days. Two precipitation methods, Fe(OH)3 and Co-APDC, are typically used to concentrate Pb and Po from seawater samples, and deep …

Genetic And Ecological Consequences Of Recent Habitat Fragmentation In A Narrow Endemic Plant Species Within An Urban Context, Nicola Delnevo, Andrea Piotti, Michele Carbognani, Eddie J. Van Etten, William D. Stock, David L. Field, Margaret Byrne

Research outputs 2014 to 2021

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout …

Effects Of Emerging Contaminants On Centrarchidae And Catostomidae In Midwestern Rivers: A Multiple Biomarker Approach, Camden Garret Nix

Masters Theses

Natural habitats of fish are gradually declining due to land use and pollution caused by industrial wastes, intensive agriculture and contamination from sewage systems. The United States has 14,780 wastewater treatment facilities that discharge effluent into navigable waters, and in some cases these discharge waters represent a considerable proportion of the water system flow. These activities make it critical to discern the effects of pollutants that are entering our waterways at a consistent rate, such as 17β-estradiol (E2) and nickel, on aquatic organisms. To determine the effects of 17β-estradiol on endocrine disruption in fish, Bluegill Sunfish (Lepomis macrochirus) …

Effects Of Wastewater Effluent On Fish Fin Morphology Of Larval Fathead Minnows (Pimephales Promelas) And Swimming Performance Of Smallmouth Buffalo (Ictiobus Bubalus), Seth Michael Bogue

Masters Theses

The Sangamon River flows across central Illinois and is mostly free flowing except in the city of Decatur where it is impounded to form Lake Decatur. The Sanitary District of Decatur (SDD) is located approximately three miles downstream of the Lake Decatur dam. For a significant portion of the year, the stretch of the Sangamon River downstream of SDD is dominated by effluent due to limited discharge from the Lake Decatur dam. This has resulted in heavy nutrient loading, most notably phosphorus, and elevated levels of nickel and other compounds in the downstream section of the river. Smallmouth buffalo ( …

Using New And Long-Term Multi-Scale Remotely Sensed Data To Detect Recurrent Fires And Quantify Their Relationship To Land Cover/Use In Indonesian Peatlands, Yenni Vetrita

Electronic Theses and Dissertations

Indonesia has committed to reducing its greenhouse gases emissions by 29% (potentially up to 41% with international assistance) by 2030. Achieving those targets requires many efforts but, in particular, controlling the fire problem in Indonesia’s peatlands is paramount, since it is unlikely to diminish on its own in the coming decades. This study was conducted in Sumatra and Kalimantan peatlands in Indonesia. Four MODIS-derived products (MCD45A1 collection 5.1, MCD64A1 (collection 5.1 and 6), FireCCI51) were initially assessed to explore long-term fire frequency and land use/cover change relationships. The results indicated the product(s) could only detect half of the fires accurately. …

The Impact Of Tidal Elevation And Climate Change On The Growth And Performance Of Balanus Glandula, Sam Martin

Pitzer Senior Theses

Tidal elevation affects the survival, growth, and performance of intertidal organisms because it regulates their exposure to heat, waves, food availability, and a variety of other abiotic factors. While previous research has explored the relationship between temperature and the performance of the barnacle Balanus glandula, there are unanswered questions about how tidal elevation affects B. glandula performance and growth. I compared the growth of B. glandula at three tidal elevations in Friday Harbor, Washington, and estimated the metabolic cost of emersion at each tidal elevation using a cost equation gained from thermal performance curves and average daily maximum temperatures. …

Impact Of Arbuscular Mycorrhizal Fungi On Conyza Canadensis Drought Responses And Possible Mechanisms, Kian G.M. Speck, Ylva Lekberg, Anna Sala

Undergraduate Theses, Professional Papers, and Capstone Artifacts

• Arbuscular mycorrhizal fungi (AMF) are important plant mutualists that can facilitate plant responses to various environmental stressors, such as drought. A plant that may benefit from AMF-induced drought tolerance is Conyza canadensis due to its ability to thrive in dry conditions and its high colonization rate. However, no studies have researched C. canadensis in this context and the exact mechanisms of AMF-induced drought tolerance are still unknown.
• To better understand if and how AMF facilitate drought response in C. canadensis, we conducted a greenhouse experiment comparing the response of mycorrhizal and non-mycorrhizal plants to three watering levels. We measured …

Habitat Selection By Vulnerable Golden Bandicoots In The Arid Zone, Cheryl A. Lohr, Kristen Nilsson, Colleen Sims, Judy Dunlop, Michael T. Lohr

Research outputs 2014 to 2021

In 2010, vulnerable golden bandicoots (Isoodon auratus) were translocated from Barrow Island, Western Australia, to a mainland predator-free enclosure on the Matuwa Indigenous Protected Area. Golden bandicoots were once widespread throughout a variety of arid and semiarid habitats of central and northern Australia. Like many small-to-medium-sized marsupials, the species has severely declined since colonization and has been reduced to only four remnant natural populations. Between 2010 and 2020, the reintroduced population of golden bandicoots on Matuwa was monitored via capture–mark–recapture data collection, which was used in spatially explicit capture–recapture analysis to monitor their abundance over time. In 2014, we used …

Natural Habitat Of Bali Starling (Leucopsar Rothschildi) In Bali Barat National Park, Indonesia, Sutomo Sutomo, Eddie Van Etten

Research outputs 2014 to 2021

The Indonesian tropical savannas and dry forests provide habitats to various endemic wildlife. Unfortunately, a few of these endemic species are now seriously threatened and are red listed in the conservation status of International Union for Conservation of Nature (IUCN). Among these species, the Bali starling or Bali mynah Leucopsar rotschildi, locally known as Jalak Bali, is now mostly restricted to the Bali Barat National Park. Given the high extinction risk faced by such species, conservation programs require multidisciplinary approaches that would address both the biological attributes of the species itself and their habitat requirements. Regrettably, for many species, their …

Evidence Of Large Increases In Sedimentation Rates Due To Fish Trawling In Submarine Canyons Of The Gulf Of Palermo (Sw Mediterranean), Sarah Paradis, Claudio Lo Iacono, Pere Masqué, Pere Puig, Albert Palanques, Tommaso Russo, The Island Cruise Tem

Research outputs 2014 to 2021

Bottom trawling in submarine canyons can affect their natural sedimentation rates, but studies addressing this issue are still scarce. In the Gulf of Palermo (SW Mediterranean), bottom trawling occurs on the slope around Oreto, Arenella and Eleuterio canyons. Analyses of excess 210Pb concentrations and grain size fractions in sediment cores from their canyon axes revealed that sedimentation rates and silt contents increased in all canyons in the 1980s, due to the expansion of more powerful trawlers ( > 500 HP) to deeper fishing grounds. In Eleuterio and Arenella canyons, sedimentation rates increased by an order of magnitude (0.1-1.4 cm·yr-1), whereas they …