Terrestrial and Aquatic Ecology Commons^™

A Review Of Avian Influenza A Virus Associations In Synanthropic Birds, Susan A. Shriner, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAV) have received significant attention due to the threat they pose to human, livestock, and wildlife health. In this review, we focus on what is known about IAV dynamics in less common avian species that may play a role in trafficking IAVs to poultry operations. Specifically, we focus on synanthropic bird species. Synanthropic species, otherwise known as peridomestic, are species that are ecologically associated with humans and anthropogenically modified landscapes, such as agricultural and urban areas. Aquatic birds such as waterfowl and shorebirds are the species most commonly associated with avian IAVs, and are generally considered …

Asymmetric Benefits Of A Heterospecific Breeding Association Vary With Habitat, Conspecific Abundance And Breeding Stage, Rose J. Swift, Michael J. Anteau, Erin A. Roche, Mark H. Sherfy, Dustin L. Toy, Megan M. Ring

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Heterospecific breeding associations may benefit individuals by mitigating predation risk but may also create costs if they increase competition for resources or are more easily detectable by predators. Our understanding of the interactions among hetero- and conspecifics is often lacking in mixed species colonies. Here, we test how the presence of hetero- and conspecifics influence nest and chick survival for two listed (under the U.S. Endangered Species Act) migratory species breeding on the Missouri River, USA. We monitored 2507 piping plover Charadrius melodus nests and 3245 chicks as well as 1060 least tern Sternula antillarum nests and 1374 chicks on …

Tools, Techniques And Teamwork: Transferring New Technologies For Wildlife Management, Conservation And Economic Development, John Eisemann, Gail Keirn

United States Department of Agriculture Wildlife Services: Staff Publications

Did you ever wonder who invented radio telemetry? Or breakaway snares? What about the bird repellent methyl anthranilate or the livestock protection collar? These and many other tools used in wildlife damage management resulted from creative thinking by biologists, technicians, researchers and managers working to solve complex wildlife issues. Over the past 90 years, these “aha moments” within the U.S. Department of Agriculture’s Wildlife Services program have ranged from developing novel scare devices, traps and vaccines to exploiting an animal’s visual capabilities to stop unwanted behaviors. Once discovered, these unique ideas may lead to practical, feasible and cost-effective wildlife damage …

Instability Of Glucocorticoid Metabolites In Coyote Scats: Implications For Field Sampling, Erika T. Stevenson, Eric M. Gese, Lorin A. Neuman-Lee, Susannah S. French

United States Department of Agriculture Wildlife Services: Staff Publications

Studying physiologic stress responses can assist in understanding the welfare of animals. One method of measuring the physiologic stress response is evaluating concentrations of glucocorticoid metabolites in feces. Previously, using an adrenocorticotropic hormone challenge, we found fecal glucocorticoid metabolite levels were a reliable indicator of physiologic stress response in coyotes (Canis latrans). We determine whether glucocorticoid metabolite concentrations remain stable when collecting feces over a 2-week period, a timeframe commonly used in scat surveys for wild canids. We collected feces from 6 captive coyotes maintained at the U.S. Department of Agriculture, Wildlife Services, National Wildlife Research Center, Predator …

Impact Of Anthropic Pressure On The Quality And Diversity Of Groundwater In The Region Of Sighus Oum-El-Bouaghi And El Rahmounia, Algeria., Hadjab Ramzi, Khammar Hichem, Redjaimia Lylia, Merzoug Djemoi, Saheb Menouar

Journal of Bioresource Management

Groundwater of Oum-El-Bouaghi and its surroundings hosts a variety of microflora and fauna. This study investigated the relationship between the effect of human activity and the biodiversity and distribution of aquatic fauna in two semi-arid regions Sighus region (Oum-El-Bouaghi) and El Rahmouni (Constantine) in north-eastern Algeria. Fourteen wells and six springs were studied in two hydrographic basins, that of Constantine and Seybouse Melegue. Significant differences were revealed between the wells and springs in the two watersheds, making it possible to distinguish four groups of wells and two groups of springs. The overall faunal richness of the stations appeared to be …

The Role Of Microhabitats In Structuring Cave Invertebrate Communities In Guatemala, Gabrielle S.M. Pacheco, Marconi Souza Silva, Enio Cano, Rodrigo L. Ferreira

International Journal of Speleology

Several studies have tried to elucidate the main environmental features driving invertebrate community structure in cave environments. They found that many factors influence the community structure, but rarely focused on how substrate types and heterogeneity might shape these communities. Therefore, the objective of this study was to assess which substrate features and whether or not substrate heterogeneity determines the invertebrate community structure (species richness and composition) in a set of limestone caves in Guatemala. We hypothesized that the troglobitic fauna responds differently to habitat structure regarding species richness and composition than non-troglobitic fauna because they are more specialized to live …

Water Quality Assessment In The Occurrence Of Acanthaster Spp. (Crown-Of-Thorns Starfish, Cots) On Coral Reefs In Menjangan Island, Bali, Indonesia, Novia Arinda Pradisty, Eghbert Elvan Ampou, Rizki Hanintyo

Makara Journal of Science

Aquatic stressors are known to cause biological impairment that can result in biodiversity loss in several Marine Protected Areas (MPA), including in Menjangan Island, West Bali National Park. The objectives of this study were to correlate the changes in water quality parameters with the biological effect of Crown-of-Thorns starfish (CoTS) population dynamics and to assess the most applicable parameters for continuous environmental monitoring. Field observations and surveys were conducted three times in 2017, during the wet season, dry season and season transition, in order to assess the effect of seasonal variability. Redundancy Analysis (RDA) was performed to determine the relationship …

Groundwater Quality In Two Semi-Arid Areas Of Algeria: Impact Of Water Pollution On Biodiversity, Redjaimia Lylia, Hadjab Ramzi, Khammar Hichem, Merzoug Djemoi, Saheb Menouar

Journal of Bioresource Management

The biodiversity and quality of subterranean waters were comparatively studied in the Tarf plain near Oum-El-Bouaghi and in the Ksar S’bahi in Oum-El-Bouaghi, in North-eastern Algeria. For this purpose, physicochemical and faunistic analyses were carried out on the water of ten stations located in the area of Tarf, and thirteen in the area of S’bahi. In the wells of Tarf, the average stygobiologic diversity was relatively high in the wells located upstream the dumping site from the city where the groundwater presented low contents of nitrates and orthophosphates. In contrast, the wells located in the spreading zone of Tarf wastewaters …

Experimental Nitrogen Addition Alters Structure And Function Of A Boreal Poor Fen: Implications For Critical Loads, R. Kelman Wieder, Dale H. Vitt, Melanie A. Vile, Jeremy A. Graham, Jeremy A. Hartsock, Jacqueline M.A. Popma, Hope Fillingim, Melissa House, James C. Quinn, Kimberli D. Scott, Meaghan Petix, Kelly J. Mcmillen

Public Health Sciences Faculty Publications

Bogs and fens cover 6 and 21%, respectively, of the 140,329 km2 Oil Sands Administrative Area in northern Alberta. Regional background atmospheric N deposition is low (b2 kg N ha−1 yr−1 ), but oil sands development has led to increasing N deposition (as high as 17 kg N ha−1 yr−1 ). To examine responses to N deposition, over five years, we experimentally applied N (as NH4NO3) to a poor fen near Mariana Lake, Alberta, unaffected by oil sands activities, at rates of 0, 5, 10, 15, 20, and 25 kg N ha−1 yr−1 , plus controls (no water or N …

Human Impact Overrides Bioclimatic Drivers Of Red Fox Home Range Size Globally, Michael T. Main, Robert A. Davis, David Blake, Harriet Mills, Tim S. Doherty

Research outputs 2014 to 2021

© 2020 The Authors. Diversity and Distributions published by John Wiley & Sons Ltd Aim: Identifying the variables that influence animal home range size is important for understanding the biological requirements of individuals and their social interactions. Given their often broad distributions, carnivores are model organisms for studying range-wide determinants of home range size. Here, we test predictions about environmental determinants of home range size for one of the world's most widely distributed carnivores, the red fox (Vulpes vulpes). Location: Global. Methods: We compiled a database of 70 mean home range estimates from 62 studies and four continents, which we …

Vampire Bats: Preparing For Range Expansion Into The U.S., Michael J. Bodenchuk, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

The common vampire bat apparently is expanding its range northwards in Mexico and seems poised to enter the southern United States. Climate models predict suitable habitat in the U.S. in south Texas and parts of southern Arizona. While vampire bats’ northward range expansion is not unexpected, the fact that this species brings a strain of rabies that impacts livestock and people warrants a strategic response. Annual economic damages from bats are estimated between $7M and $9M, largely associated with deaths of livestock from rabies. To prepare for the emerging rabies issue, USDA Wildlife Services programs in Texas and Arizona have …

Intensive Animal Farming Conditions Are A Major Threat To Global Health, Cynthia Schuck-Paim

Animal Sentience

Wiebers & Feigin accurately propose that reducing the risks posed by infectious disease outbreaks and other global health challenges will depend critically on transitioning away from intensive animal farming practices. Creating the right incentive structure for this transition to happen is one of the great challenges in the years to come, but a much-needed step to ensure the health and well-being of current and future generations.

Material Residence Time In Marine Canopies Under Wave-Driven Flows, Maryam Abdolahpour, Marco Ghisalberti, Kathryn Mcmahon, Paul Lavery

Research outputs 2014 to 2021

© Copyright © 2020 Abdolahpour, Ghisalberti, McMahon and Lavery. Coastal canopies (e.g., seagrasses, coral reefs, and kelp forests) are vitally important ecosystems that provide a range of ecological services (e.g., oxygen production, sediment stabilization and trapping, and recycling of nutrients). The long-term health, productivity, and survival of these canopies rely heavily on the residence time of ecologically-significant materials in these environments. Recent studies have shown that submerged canopies induce a strong mean current over the canopy top, even in purely wave-dominated environments. Thus, in addition to vertical mixing, the horizontal flushing of materials (resulting from these canopy-induced currents) will dictate …

Surface Levels, Keisha Brathwaite

Electronic Theses and Dissertations

Surface Levels are depictions of unobserved and imperceptible realities of many phytoplankton exteriors. The exhibition explores various structures, textures, and repetitious forms from microscopic surfaces of objects that cannot be seen with unaided eyes. Electron microscopy is used to perceive and analyze these otherwise unseeable surfaces in depth. Magnifications provide a reference in creating three- and two-dimensional works that are minimalistic and abstract at a visible level. This abstract 3D/2D image collection is translated into material expressions using acrylic sheets, acrylic ink, and wood as the main media for construction of individual works. Collectively, they serve to make the invisible …

Evaluating The Effect Of The Removal Of Non-Native Trout In Two High Elevation Tributary Streams In The Intermountain West, Clint Brunson

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Native fish species such as Bonneville Cutthroat Trout (BCT) require cold, clear, well-connected streams for spawning and rearing as well as access to complimentary habitats. Increasing river temperatures and lower water flows may have allowed non-native Brown Trout (BNT) to migrate into higher elevation pristine streams. Additionally, anthropogenic actions such as stocking non-native Brown and Brook (BKT) and Rainbow Trout (RBT) for angling opportunities impact BCT. Invasion of these tributaries by non-native species may reduce or eliminate cutthroat trout by predation, competition, displacement, genetic suppression, and exclusion. A seven-fold increase in BNT numbers of 50 to 350 from 2017 to …

Benthic Biological Monitoring Of The Elizabeth River Watershed (1999 And 2019), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

A study of the macrobenthic communities of the Elizabeth River watershed was conducted in summer 1999 and again in summer 2019 – a 20-year span. The primary objective of the Benthic Biological Monitoring Program of the Elizabeth River watershed was to characterize the ecological condition of regional areas of the tidal waters of the Elizabeth River watershed as indicated by the structure of the benthic communities. These characterizations are based upon application of the Benthic Index of Biotic Integrity (BIBI) developed for the Chesapeake Bay to five primary strata - the Mainstem of the river, the Lafayette River, …

Life History And Metabolic Responses Of Daphnia Magna Exposed To Effluents Of Urban Origin Treated By Advanced Oxidation, Benjamin Z. Szczygiel

Biology Theses

Modern sewage treatment processes do not remove many chemicals that pass through the sewer system, including pharmaceuticals and personal care products that have been shown to have negative effects in ecosystems. New processes have been developed to remove these chemicals, known as advanced oxidation processes (AOPs). In this study, Daphnia magna are used to examine the effects of wastewater effluent treated conventionally compared to effluent treated with AOPs (Peracetic Acid/Ultraviolet Light and Hydrogen Peroxide/Ultraviolet Light). For this purpose, two sets of experiments were preformed: a five-day survivorship trial, and a 14-day life history experiment. Growth, survival, and reproduction of Daphnia …

Population Surveys And Health Assessments Of Captive And Free-Ranging Alligator Snapping Turtles, Samantha Louise Hannabass

Graduate Theses/Dissertations

Alligator Snapping Turtles (Macrochelys temminckii) have experienced range-wide declines primarily due to overharvest for the meat market and habitat degradation in the form of damming and channelization of rivers. Head-start programs and reintroduction efforts have been initiated to release individuals throughout their historic range. Before releasing Alligator Snapping Turtles, sites need to be assessed to determine the suitability of habitat, if there is a robust turtle community already present, and the causes of the original extirpation have been eliminated. I assessed the turtle communities and documented anthropogenic impacts (e.g. boat traffic) at nine possible reintroduction sites in southeastern …

Feral Swine, Michael P. Glow, Nathan P. Snow, Kurt C. Vercauteren

Wildlife Damage Management Technical Series

Feral swine (Sus scrofa; Figure 1), also known as feral hogs, feral pigs, wild pigs, wild boar, or other similar derivations, are a non-native species considered to be one of the most destructive invasive terrestrial vertebrates in North America. While feral swine populations remained relatively small and confined in the continental United States following initial introductions by European explorers during the 15th century, substantial range expansion has occurred across every geographical region of the United States (Figure 2). This expansion has primarily been attributed to human-mediated movements, predominately for the purpose of establishing populations for recreational hunting, and facilitated by …

Do Mosquito Pesticides Harm Their Natural Enemies? Ecological Impacts And Non-Target Effects Of Larvicides On Mosquito Predators, Joseph Nelsen

Master's Theses

Larvicides are chemicals used to kill juvenile mosquitoes. When applied to an area, other aquatic organisms are exposed to these chemicals. The removal or impairment of top insect predators could be beneficial to mosquito populations once harmful pesticide levels dissipate. Two common larvicides were examined: growth regulators (IGRs) and surface films (SFs). The goal of this project was to determine if larvicides harm mosquito predators common to southern Mississippi. I surveyed aquatic sites before and after IGR and SF treatments, and then compared changes in insect community structure. Community evenness was lower in SF treated habitats. When analyzing prey taxa …

Improving Aquatic Habitat Representation In Utah Using Large Spatial Scale Environmental Datasets, Gregory C. Goodrum

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Rivers provide habitat for aquatic species, but widespread human water development degrades aquatic habitat, fragments stream networks, and threatens native fish populations. Habitat suitability models are commonly used to identify current instream habitat conditions, but are often species-specific, data-intensive, and rarely suitable to the large spatial scales required in conservation and water resources management. Thus, there is need to develop and validate habitat suitability models that provide ecologically-meaningful estimations of aquatic habitat, but are simple enough to apply at large geographic areas and flexible to incorporate different species. I tested the accuracy of 15 habitat suitability models estimating Bonneville Cutthroat …

Not The Latest Science: National Recommended Water Quality Criteria For Aquatic Life Under The Clean Water Act, Sam B. Duggan, Christopher J. Kotalik

Minnesota Journal of Law, Science & Technology

No abstract provided.

Paleoenvironmental Reconstruction Of Quaternary Saltville, Virginia, Using Ostracode Autecology, Austin Gause

Electronic Theses and Dissertations

The Saltville valley in southwestern Virginia is home to Quaternary localities containing paleontological and archaeological remains. Historically the valley has been mined for salt and the small lakes, ponds and springs along the valley floor have a brackish signature. A preliminary report on the site’s ostracode fauna suggested that the site’s water was not always saline. This study analyzed modern and Quaternary ostracodes to understand the valley’s hydrologic and chemical evolution. Sediments contained primarily freshwater species, including the environmentally sensitive Candona crogmaniana. The presence of Pelocypris tuberculatum and a new Fabaeformiscandona species throughout a vertical section spanning the latest Pleistocene …

An Evaluation Of Bird And Bat Mortality At Wind Turbines In The Northeastern United States, Daniel Y. Choi, Thomas W. Wittig, Bryan M. Kluever

United States Department of Agriculture Wildlife Services: Staff Publications

Wind energy offers substantial environmental benefits, but wind facilities can negatively impact wildlife, including birds and bats. Researchers and managers have made major efforts to chronicle bird and bat mortality associated with wind facilities, but few studies have examined the patterns and underlying mechanisms of spatial patterns of fatalities at wind facilities. Understanding the horizontal fall distance between a carcass and the nearest turbine pole is important in designing effective search protocols and estimating total mortality. We explored patterns in taxonomic composition and fall distance of bird and bat carcasses at wind facilities in the Northeastern United States using publicly …

Estimation Of Wildlife Damage From Federal Crop Insurance Data, Sophie Mckee, Stephanie A. Shwiff, Aaron M. Anderson

United States Department of Agriculture Wildlife Services: Staff Publications

BACKGROUND: Wildlife damage to crops is a persistent and costly problem for many farmers in the USA. Most existing estimates of crop damage have relied on direct assessment methods such as field studies conducted by trained biologists or surveys distributed to farmers. In this paper, we describe a new method of estimating wildlife damage that exploits federal crop insurance data. We focused our study on four crops: corn, soybean, wheat, and cotton, chosen because of their economic importance and their vulnerability to wildlife damage.

RESULTS: We determined crop-raiding hot spots across the USA over the 2015–2019 period and identified the …

Bloom Or Bust: Search For Phytoplankton Community Drivers Using Long-Term Time-Series Observations And Field Measurements In A Model Great Lakes Estuary, Jasmine Mancuso

Masters Theses

As sentinels of climate change and other anthropogenic effects, freshwater lakes are experiencing ecosystem disruptions at every level of the food web, beginning with the phytoplankton. One of the major threats to waterbodies around the world are cyanobacterial harmful algal blooms (HABs) resulting from anthropogenic eutrophication and exacerbated by climate change. Muskegon Lake, a drowned river mouth Great Lakes estuary on the east coast of Lake Michigan, is no exception and was declared an Area of Concern by the EPA in 1987 with nuisance algal blooms cited as a beneficial use impairment. Using long-term data and additional 2019 sampling, we …

Competitive Interactions: Spatial And Temporal Niche Partitioning Between Brook And Brown Trout In Southwest Michigan, Frederick J. Glassen

Masters Theses

Niche diet partitioning between Brook Trout and Brown Trout were studied in two southwestern Michigan, USA streams, one dominated by Brook Trout, the other with both Brook and Brown Trout. Brook Trout are endemic to eastern North America and have been introduced throughout the world for sport fishing. Brown Trout were first introduced to Michigan in 1883 using a genetic strain from Germany. Stomach contents were collected from a population of Brook Trout in the absence of Brown Trout in Frost Creek, while the other population was in potential competition with Brown Trout in Cedar Creek. Absent Brown Trout, Brook …

Improving Our Ability To Estimate Vital Rates Of Endangered Fishes On The San Juan River Using Novel Applications Of Pit-Tag Technology, J. Benjamin Stout

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Estimating demographic parameters, such as survival and abundance, with accuracy and precision is vital for detecting trends in populations and assessing the effectiveness of management actions. In most cases, a lack of capture data make estimating parameters very challenging. The use of new technologies to increase the amount of remotely collected data is increasing, but brings new limitations and analytical issues to be resolved. One of those new technologies is the use of a mobile floating PIT-tag antenna to detect PIT-tagged fish. The issue that arises with this technology is determination of the status of detected tags (i.e., live fish …

Impact Of Disturbance Regimes On Community And Landscape Biodiversity In Atlantic Coastal Pine Barren Ecoregion Streams, Sean T. Mccanty

Graduate Doctoral Dissertations

Streams are dynamic systems shaped by geographic location, hydrology, riparian vegetation, and in-stream habitat. Furthermore, ecosystem disturbance plays a major role in structuring stream communities and ecosystem processes. Disturbances include natural occurrences, such as flooding, drought, and fire events and anthropogenic disturbances such as land use changes, damming, and pollution. Agricultural use acts as a press disturbance regime, homogenizing the surrounding landscape and simplifying in-stream habitat, leaving legacy effects after farming ceases. Active restoration is intended to ameliorate these effects by reintroducing variation, with the goal of shifting the ecosystem into a more diverse and natural state. The act of …

Harmful Algal Blooms: Dominance In Lakes And Risk For Cyanotoxin Exposure In Food Crops, Austin D. Bartos

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Climate change and human activities are promoting the dominance of a photosynthetic family of aquatic bacteria, cyanobacteria. Blooms of cyanobacteria are not only a visual nuisance but can produce a variety of cyanotoxins than can harm the liver, skin, and nervous system of animals and humans. We analyzed lakes in the contiguous United States and found that between 2007 and 2012, the number of lakes that produced measurable quantities of cyanotoxins increased from 33% to 45%. Nitrogen and phosphorus pollution were the main drivers of cyanobacteria blooms and toxin production between these years. Many of these lakes and reservoirs are …