Terrestrial and Aquatic Ecology Commons^™

Variation In Population Densities Of The Florida Scrub Lizard (Sceloporus Woodi) Between Managed Sand Pine Scrub And Longleaf Pine Stands In The Ocala National Forest, Matthew D. Kaunert

College of Graduate Studies: Theses & Dissertations

Population-level response to habitat fragmentation is central to applied species management and conservation. Managed landscapes are often subject to increased fragmentation and, consequently, may force once connected populations to function as metapopulations. Studies investigating metapopulations occurring over patchy, managed landscapes are of increasing importance as fragmentation is a known cause of biodiversity loss. In June-September 2012, populations of the rare, endemic Florida scrub lizard (Sceloporus woodi) were sampled across the Ocala National Forest (ONF) to compare abundance and density across two management types. In the ONF, sand-pine scrub is clearcut and rollerchopped whereas longleaf pine is managed via …

Horseshoe Crab Eggs: A Rare Resource For Predators In Long Island Sound, Mark Beekey, Jennifer Mattei, Barbara J. Pierce

Biology Faculty Publications

In Delaware Bay, the spawning of several million horseshoe crabs (Limulus polyphemus) coincides with the arrival of migratory shorebirds that feed on their eggs. High horseshoe crab spawning densities and resulting high egg densities drive egg availability and predation rates. At high spawning densities, female horseshoe crabs perturb previously deposited clutches causing eggs to rise to the sediment surface (surface egg densities average 100,000 eggs m^{− 2}). At the surface (0–5 cm), the eggs are quickly depleted by shorebirds and other predators. This interaction between egg density and egg predation has not been explicitly explored on …

A History Of Place: Using Phytolith Analysis To Discern Holocene Vegetation Change On Sanak Island, Western Gulf Of Alaska, Cricket C. Wilbur

Antioch University Dissertations & Theses

This study investigated a terrestrial climate proxy, phytoliths, as a complimentary approach to documenting the dynamics of present and past vegetation on Sanak Island, the largest island in a small island group in the eastern Aleutian archipelago, and as a new basis by which to interpret Holocene environmental variability in Alaska. A phytolith reference collection was established from 59 selected plant species of maritime tundra belonging to 27 families. The grass species and a sedge species produced abundant phytolith forms whereas the majority of dicotyledons in this study were trace producers of phytoliths. A paleoenvironmental reconstruction from fossil phytoliths recovered …

Herbivory By Parma Mccullochi (Pomacentridae) : Its Role As An Ecosystem Engineer In Temperate Algal-Dominated Reefs, Frederico Vitelli

Theses: Doctorates and Masters

Pomacentridae is one of the most representative families of herbivorous fishes inhabiting both tropical and temperate reefs, yet the vast majority of studies examining feeding within this family have been undertaken in tropical rather than temperate regions. Despite the high abundances of the pomacentrid Parma mccullochi in temperate waters of Western Australia, and their likely importance in removing algae from reefs in the region, there is a lack of information on their diet and their impact on the reef algal community. This study aims to determine the role of Parma mccullochi as an ecosystem engineer on temperate algal-dominated reefs in …

Metapopulation Theory Explains Black-Stripe Minnow (Pisces: Galaxiidae, Galaxiella Nigrostriata) Distribution In Seasonal Wetlands In South-West Western Australia, David M. Galeotti

Theses: Doctorates and Masters

The objective of this project was to determine if Galaxiella nigrostriata populations could belong to a metapopulation. Metapopulation theory describes how multiple populations with occasional connectivity are a ‘population of populations’. Some populations’ habitats have optimal conditions (source habitats), others experience regular extinctions (sink habitats). Connectivity allows repopulation of extinct or uninhabited habitats. Galaxiella nigrostriata occurred randomly in 11 seasonal wetlands in the Kemerton wetland complex in south-west Western Australia over a 16 year period. The wetlands did not appear to be connected.

Around 70% of wetlands on the Swan Coastal Plain in south-west WA have been filled or degraded …

Applying The Principles Of Spatial Modelling To The Management Of Biodiversity In The Fragmented Landscapes Of South-Western Australia, Shaun Molloy

Theses: Doctorates and Masters

Biodiversity conservation throughout the world is challenged by the impacts of a changing climate on fragmented landscapes. To mitigate these threats, conservation managers require models which can demonstrate the consequences of both negative impacts and management actions. This need can be addressed through spatial modelling applications. Unfortunately, throughout much of the world, spatial modelling is forgone, being seen as requiring skills and resources beyond the means of many conservation planners and managers. This thesis seeks to address this dilemma by delivering criteria for a successful modelling application and by providing case studies which demonstrate how appropriate modelling can be undertaken …

Generation Of Intracellular Reactive Oxygen Species And Genotoxicity Effect To Exposure Of Nanosized Polyamidoamine (Pamam) Dendrimers In Plhc-1 Cells In Vitro, Hugh Byrne, Pratap Naha

Articles

Polyamidoamine (PAMAM) dendrimers elicit systematically variable cyto- and eco-toxic responses, promising the basis for structure activity relationships governing nanotoxicological responses. Increased production of intracellular reactive oxygen species (ROS), genotoxicity and apoptosis due to in-vitro exposure of hepatocellular carcinoma cells to dendrimer generations G-4, G-5 and G-6 is demonstrated. A generation dependent increase in ROS and genotoxicity was observed, consistent with our previous studies. The responses correlate well with the number of surface amino groups per generation. Although ROS production initially increases approximately linearly, it saturates at higher doses. Notably, normalised to molar dose of surface amino groups, the dose-dependent ROS …

Colonization Of Subterranean Habitats By Spiders In Central Europe, Vlastimil Růžička, Petr Šmilauer, Roman Mlejnek

International Journal of Speleology

Using data from the Czech Republic, we studied the distribution of spiders in soils, crevice systems, scree and caves, i.e. subterranean habitats at depths spanning from 10 cm to 100 m. In total, we found 161 species. The number of species declines with increasing habitat depth, with a major drop in species richness at the depth of 10 meters. Thirteen species exhibit morphological adaptations to life in subterranean habitats. At depths greater than 10 meters, spider assemblages are almost exclusively composed of troglomorphic species. We propose a hypothesis of evolution of troglomorphisms during Quaternary climatic cycles.

Gulf-Wide Decreases In The Size Of Large Coastal Sharks Documented By Generations Of Fishermen, Sean P. Powers, F. Joel Frodrie, Steven B. Scyphers, J. Marcus Drymon, Robert L. Shipp, Gregory W. Stunz

University Faculty and Staff Publications

Large sharks are top predators in most coastal and marine ecosystems throughout the world, and evidence of their reduced prominence in marine ecosystems has been a serious concern for fisheries and ecosystem management. Unfortunately, quantitative data to document the extent, timing, and consequences of changes in shark populations are scarce, thwarting examination of long-term (decadal, century) trends, and reconstructions based on incomplete data sets have been the subject of debate. Absence of quantitative descriptors of past ecological conditions is a generic problem facing many fields of science but is particularly troublesome for fisheries scientists who must develop specific targets for …

A New Species Of Metathelazia (Nematoda: Pneumospiruridae) From The Lungs Of A Nine-Banded Armadillo In Central Mexico = Especie Nueva De Metathelazia (Nematoda: Pneumospiruridae) De Los Pulmones De Un Armadillo Del Centro De México, F. Agustín Jiménez-Ruiz, Rogelio Rosas-Valdez, Scott Lyell Gardner

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Twenty-four worms were collected from the bronchioles in both lungs of a male nine-banded armadillo Dasypus novemcinctus Linnaeus, 1758 captured in Teacalco, Morelos, Mexico. The worms, herein named Metathelazia mexicana n. sp., show a constriction in the esophagus at the level of the nerve ring; males of the species have 7 pairs of papillae, fewer than the other species in the genus. Metathelazia capsulata is the most similar species to Metathelazia mexicana; however, the latter has much shorter spicules. This is the fourth species in the genus known to occur in the New World.

Se recolectó un total de …

On The Morphology And Taxonomy Of Griphobilharzia Amoena Platt And Blair, 1991 (Schistosomatoidea), A Dioecious Digenetic Trematode Parasite Of The Freshwater Crocodile, Crocodylus Johnstoni, In Australia [Critical Comment], Thomas R. Platt, Eric P. Hoberg, Leslie A. Chisholm

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Griphobilharzia amoena Platt and Blair, 1991 was originally described was originally described as a dioecious trematode, parasitic in the circulatory system of the Australian freshwater crocodile, Crocodylus johnstoni, with the female completely enclosed in a gynecophoric chamber of the male and the two worms orientated anti-parallel to each other. A recent publication questions the original description, arguing that G. amoena is monoecious and, as a consequence, the species was transferred to Vasotrema Stunkard, 1928 (Spirorchiidae) as Vasotrema amoena n. comb. We provide photomicrographic evidence that the original description of G. amoena is correct and that Griphobilharzia Platt and Blair, …

Barrow Island Ute Guide - Non-Indigenous Invertebrates, Frogs, Reptiles & Weeds, Mike Grimm, Kristofer Collett, Jessica Harrison, Peter Davis, Marc Widmer, Andras Szito, Rob Emery, Peter Mangano, John Botha, David Robinson, Brad Maryan

Biosecurity published reports

Barrow Island, the second largest island in Western Australia, is a Class A Nature Reserve and home to a variety of rare and endangered fauna and flora, some of which occur nowhere else. To protect fauna and flora it is essential workers and visitors to the island are aware of the risks that a non-indigenous species (NIS) poses to the ecological balance of Barrow Island.

Workers and visitors to Barrow Island need to be aware and keep their eyes open for any unusual fauna and flora that might be in accommodation units, recreation areas or the work place. Reports from …

Refining Thresholds In Coupled Fire–Vegetation Models To Improve Management Of Encroaching Woody Plants In Grasslands, Dirac L. Twidwell Jr, Samuel D. Fuhlendorf, Charles A. Taylor Jr, William E. Rogers

Department of Agronomy and Horticulture: Faculty Publications

1. Restoration priorities are typically established without quantitative information on how to overcome the thresholds that preclude successful restoration of desirable ecosystem properties and services. We seek to demonstrate that quantifying ecological thresholds and incorporating them into management-oriented frameworks provide a more comprehensive perspective on how the threshold concept can be applied to achieve restoration goals.

2. As an example, restoration actions have been largely unsuccessful when based on prevailing ecological knowledge of fire-based thresholds in nonresprouting Juniperus woodland. We build on previous threshold-based research and link well-established models from applied fire physics with a widely applied ecological positive feedback …

Solid-Phase Organic Matter Reduction Regulates Anaerobic Decomposition In Bog Soil, Jason K. Keller, Kimberly K. Takagi

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Peatlands store globally significant amounts of carbon and are important sources of the greenhouse gas methane (CH4) to the atmosphere. However, for reasons which are not well understood, many peatland soils produce smaller amounts of CH4 than theoretically predicted, and carbon dioxide (CO2) produced during anaerobic decomposition in peatland soils cannot be accounted for by commonly measured microbial processes. Here we show that the reduction of solid-phase organic matter (i.e., humic substances) suppresses CH4 production in a bog soil and can be responsible for 33–61% of the total carbon mineralization in this soil. These results demonstrate that the reduction of …

Mutation From Arginine To Lysine At The Position 189 Of Hemagglutinin Contributes To The Antigenic Drift In H3n2 Swine Influenza Viruses, Jianqiang Ye, Yifei Xu, Jillian Harris, Hailiang Sun, Andrew S. Bowman, Fred L. Cunningham, Carol Cardona, Kyoungjin J. Yoon, Richard D. Slemons, Xiu-Feng Wan

United States Department of Agriculture Wildlife Services: Staff Publications

Two distinct antigenic clusters were previously identified among the H3N2 swine influenza A viruses (IAVs) and were designated H3N2SIV-alpha and H3N2SIV-beta (Feng et al., 2013. Journal of Virology 87(13), 7655–7667). A consistent mutation was observed at the position 189 of hemagglutinin (R189K) between H3N2SIV-alpha and H3N2SIV-beta fair isolates. To evaluate the contribution of R189K mutation to the antigenic drift from H3N2SIV-alpha to H3N2SIV-beta, four reassortant viruses with189R or189K were generated. The antigenic cartography demonstrated that the R189K mutation in the hemagglutinin of H3N2IAV contributed to the antigenicdrift, separating these viruses into H3N2SIV-alpha to H3N2SIV- beta. This R189K mutation was also …

Quantifying Carbon Allocation To Mycorrhizal Fungi By Temperate Forest Tree Species Across A Nitrogen Availability Gradient, Shersingh Joseph Tumber-Davila

Honors Theses and Capstones

Terrestrial ecosystems make up the largest carbon pool with a major portion of that being forests. With carbon being a major concern due to global climate change, being able to make accurate models is increasingly important. Studies have shown that trees may allocate up to 50% of their photosynthetically fixed carbon underground; however these values haven’t been accurately quantified and underground carbon allocation has been historically overlooked. Mycorrhizal fungi may be a large portion of underground carbon allocation, as they have a symbiotic relationship with trees where they provide the plant with water and nutrients in return for sugars (carbon). …

Food Resource Availability For Carnaby's Cockatoo Calyptorhynchus Latirostris On The Swan Coast Plain, Teagan Johnston

Theses: Doctorates and Masters

To achieve a balance between sustainable development and conservation of threatened species, management depends on understanding the predicted response and interaction of that species with their environment in order to develop appropriate mitigating solutions. The Carnaby’s cockatoo Calyptorhynchus latirostris is declining across much of its range due to the detrimental effect of habitat degradation and loss. Since the decline of food resource availability in non-breeding areas is believed to be contributing to the reduction in the number of Carnaby’s cockatoos knowledge of the birds’ foraging ecology and the influence of external factors on food resource availability is essential for effective …

The Biology And Ecology Of Epinephilidae Speciea And Their Implications To Fisheries Management, Jason R. How

Theses: Doctorates and Masters

This thesis examines the biological and ecological aspects of members of the globally exploited Epinephilidae with reference to fisheries management and in particular the use of closures. The leopard coralgrouper Plectropomus leopardus is a common reef fish throughout the Indo-Pacific region and a major target of both commercial and recreational fisheries. There has been limited research on this species in the eastern Indian Ocean, where there are only two populations. An examination of the species found a number of significant biological differences to their eastern Australian con-specifics. Most noticeable was the strong size-related cue over their protogynous sex change. The …

Threats And Knowledge Gaps For Ecosystem Services Provided By Kelp Forests: A Northeast Atlantic Perspective, Dan A. Smale, Michael T. Burrows, Philippa J. Moore, Nessa O'Connor, Stephen J. Hawkins

Research outputs 2013

Kelp forests along temperate and polar coastlines represent some of most diverse and productive habitats on the Earth. Here, we synthesize information from >60 years of research on the structure and functioning of kelp forest habitats in European waters, with particular emphasis on the coasts of UK and Ireland, which represents an important biogeographic transition zone that is subjected to multiple threats and stressors. We collated existing data on kelp distribution and abundance and reanalyzed these data to describe the structure of kelp forests along a spatial gradient spanning more than 10° of latitude. We then examined ecological goods and …

Pine As Fast Food: Foraging Ecology Of An Endangered Cockatoo In A Forestry Landscape, William Stock, Hugh Finn, Jackson Parker, Ken Dods

Research outputs 2013

Pine plantations near Perth, Western Australia have provided an important food source for endangered Carnaby’s Cockatoos (Calyptorhynchus latirostris) since the 1940s. Plans to harvest these plantations without re-planting will remove this food source by 2031 or earlier. To assess the impact of pine removal, we studied the ecological association between Carnaby’s Cockatoos and pine using behavioural, nutritional, and phenological data. Pine plantations provided high densities of seed (158 025 seeds ha21) over a large area (c. 15 000 ha). Carnaby’s Cockatoos fed throughout these plantations and removed almost the entire annual crop of pine cones. Peak cockatoo abundance coincided with …

Coastal Bacterioplankton Community Dynamics In Response To A Natural Disturbance, Sara K. Yeo, Megan J. Huggett, Alexander Eiler, Michael Rappe

Research outputs 2013

In order to characterize how disturbances to microbial communities are propagated over temporal and spatial scales in aquatic environments, the dynamics of bacterial assemblages throughout a subtropical coastal embayment were investigated via SSU rRNA gene analyses over an 8-month period, which encompassed a large storm event. During non-perturbed conditions, sampling sites clustered into three groups based on their microbial community composition: an offshore oceanic group, a freshwater group, and a distinct and persistent coastal group. Significant differences in measured environmental parameters or in the bacterial community due to the storm event were found only within the coastal cluster of sampling …

Exploring The Sulfide Tolerance Of Ectosymbiotic Niphargus Amphipods From The Frasassi Caves, Central Italy, Jan Bauermeister, Karoline Assig, Sharmishtha Dattagupta

International Journal of Speleology

Two species of the crustacean amphipod genus Niphargus inhabit the sulfidic groundwaters of the Frasassi caves in central Italy, and both harbor filamentous, sulfide-oxidizing Thiothrix ectosymbionts. As sulfide is toxic to most aerobic organisms, it appeared possible that the ectosymbionts could help their Niphargus hosts with detoxification processes. In this study, mortality due to sulfide was compared between Niphargus individuals with ectosymbionts and individuals whose ectosymbionts had been killed by antibiotic treatment. Both Frasassi-dwelling Niphargus species revealed exceptionally high tolerances to sulfide compared to other amphipod species studied so far. Niphargus individuals without viable ectosymbionts tolerated sulfide levels exceeding those …